PyPI - crackerjack - Versions diffs - 0.18.2__py3-none-any.whl → 0.45.2__py3-none-any.whl - Mend

crackerjack 0.18.2py3-none-any.whl → 0.45.2py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (533) hide show

crackerjack/README.md +19 -0
crackerjack/__init__.py +96 -2
crackerjack/__main__.py +637 -138
crackerjack/adapters/README.md +18 -0
crackerjack/adapters/__init__.py +39 -0
crackerjack/adapters/_output_paths.py +167 -0
crackerjack/adapters/_qa_adapter_base.py +309 -0
crackerjack/adapters/_tool_adapter_base.py +706 -0
crackerjack/adapters/ai/README.md +65 -0
crackerjack/adapters/ai/__init__.py +5 -0
crackerjack/adapters/ai/claude.py +853 -0
crackerjack/adapters/complexity/README.md +53 -0
crackerjack/adapters/complexity/__init__.py +10 -0
crackerjack/adapters/complexity/complexipy.py +641 -0
crackerjack/adapters/dependency/__init__.py +22 -0
crackerjack/adapters/dependency/pip_audit.py +418 -0
crackerjack/adapters/format/README.md +72 -0
crackerjack/adapters/format/__init__.py +11 -0
crackerjack/adapters/format/mdformat.py +313 -0
crackerjack/adapters/format/ruff.py +516 -0
crackerjack/adapters/lint/README.md +47 -0
crackerjack/adapters/lint/__init__.py +11 -0
crackerjack/adapters/lint/codespell.py +273 -0
crackerjack/adapters/lsp/README.md +49 -0
crackerjack/adapters/lsp/__init__.py +27 -0
crackerjack/adapters/lsp/_base.py +194 -0
crackerjack/adapters/lsp/_client.py +358 -0
crackerjack/adapters/lsp/_manager.py +193 -0
crackerjack/adapters/lsp/skylos.py +283 -0
crackerjack/adapters/lsp/zuban.py +557 -0
crackerjack/adapters/refactor/README.md +59 -0
crackerjack/adapters/refactor/__init__.py +12 -0
crackerjack/adapters/refactor/creosote.py +318 -0
crackerjack/adapters/refactor/refurb.py +406 -0
crackerjack/adapters/refactor/skylos.py +494 -0
crackerjack/adapters/sast/README.md +132 -0
crackerjack/adapters/sast/__init__.py +32 -0
crackerjack/adapters/sast/_base.py +201 -0
crackerjack/adapters/sast/bandit.py +423 -0
crackerjack/adapters/sast/pyscn.py +405 -0
crackerjack/adapters/sast/semgrep.py +241 -0
crackerjack/adapters/security/README.md +111 -0
crackerjack/adapters/security/__init__.py +17 -0
crackerjack/adapters/security/gitleaks.py +339 -0
crackerjack/adapters/type/README.md +52 -0
crackerjack/adapters/type/__init__.py +12 -0
crackerjack/adapters/type/pyrefly.py +402 -0
crackerjack/adapters/type/ty.py +402 -0
crackerjack/adapters/type/zuban.py +522 -0
crackerjack/adapters/utility/README.md +51 -0
crackerjack/adapters/utility/__init__.py +10 -0
crackerjack/adapters/utility/checks.py +884 -0
crackerjack/agents/README.md +264 -0
crackerjack/agents/__init__.py +66 -0
crackerjack/agents/architect_agent.py +238 -0
crackerjack/agents/base.py +167 -0
crackerjack/agents/claude_code_bridge.py +641 -0
crackerjack/agents/coordinator.py +600 -0
crackerjack/agents/documentation_agent.py +520 -0
crackerjack/agents/dry_agent.py +585 -0
crackerjack/agents/enhanced_coordinator.py +279 -0
crackerjack/agents/enhanced_proactive_agent.py +185 -0
crackerjack/agents/error_middleware.py +53 -0
crackerjack/agents/formatting_agent.py +230 -0
crackerjack/agents/helpers/__init__.py +9 -0
crackerjack/agents/helpers/performance/__init__.py +22 -0
crackerjack/agents/helpers/performance/performance_ast_analyzer.py +357 -0
crackerjack/agents/helpers/performance/performance_pattern_detector.py +909 -0
crackerjack/agents/helpers/performance/performance_recommender.py +572 -0
crackerjack/agents/helpers/refactoring/__init__.py +22 -0
crackerjack/agents/helpers/refactoring/code_transformer.py +536 -0
crackerjack/agents/helpers/refactoring/complexity_analyzer.py +344 -0
crackerjack/agents/helpers/refactoring/dead_code_detector.py +437 -0
crackerjack/agents/helpers/test_creation/__init__.py +19 -0
crackerjack/agents/helpers/test_creation/test_ast_analyzer.py +216 -0
crackerjack/agents/helpers/test_creation/test_coverage_analyzer.py +643 -0
crackerjack/agents/helpers/test_creation/test_template_generator.py +1031 -0
crackerjack/agents/import_optimization_agent.py +1181 -0
crackerjack/agents/performance_agent.py +325 -0
crackerjack/agents/performance_helpers.py +205 -0
crackerjack/agents/proactive_agent.py +55 -0
crackerjack/agents/refactoring_agent.py +511 -0
crackerjack/agents/refactoring_helpers.py +247 -0
crackerjack/agents/security_agent.py +793 -0
crackerjack/agents/semantic_agent.py +479 -0
crackerjack/agents/semantic_helpers.py +356 -0
crackerjack/agents/test_creation_agent.py +570 -0
crackerjack/agents/test_specialist_agent.py +526 -0
crackerjack/agents/tracker.py +110 -0
crackerjack/api.py +647 -0
crackerjack/cli/README.md +394 -0
crackerjack/cli/__init__.py +24 -0
crackerjack/cli/cache_handlers.py +209 -0
crackerjack/cli/cache_handlers_enhanced.py +680 -0
crackerjack/cli/facade.py +162 -0
crackerjack/cli/formatting.py +13 -0
crackerjack/cli/handlers/__init__.py +85 -0
crackerjack/cli/handlers/advanced.py +103 -0
crackerjack/cli/handlers/ai_features.py +62 -0
crackerjack/cli/handlers/analytics.py +479 -0
crackerjack/cli/handlers/changelog.py +271 -0
crackerjack/cli/handlers/config_handlers.py +16 -0
crackerjack/cli/handlers/coverage.py +84 -0
crackerjack/cli/handlers/documentation.py +280 -0
crackerjack/cli/handlers/main_handlers.py +497 -0
crackerjack/cli/handlers/monitoring.py +371 -0
crackerjack/cli/handlers.py +700 -0
crackerjack/cli/interactive.py +488 -0
crackerjack/cli/options.py +1216 -0
crackerjack/cli/semantic_handlers.py +292 -0
crackerjack/cli/utils.py +19 -0
crackerjack/cli/version.py +19 -0
crackerjack/code_cleaner.py +1307 -0
crackerjack/config/README.md +472 -0
crackerjack/config/__init__.py +275 -0
crackerjack/config/global_lock_config.py +207 -0
crackerjack/config/hooks.py +390 -0
crackerjack/config/loader.py +239 -0
crackerjack/config/settings.py +141 -0
crackerjack/config/tool_commands.py +331 -0
crackerjack/core/README.md +393 -0
crackerjack/core/__init__.py +0 -0
crackerjack/core/async_workflow_orchestrator.py +738 -0
crackerjack/core/autofix_coordinator.py +282 -0
crackerjack/core/container.py +105 -0
crackerjack/core/enhanced_container.py +583 -0
crackerjack/core/file_lifecycle.py +472 -0
crackerjack/core/performance.py +244 -0
crackerjack/core/performance_monitor.py +357 -0
crackerjack/core/phase_coordinator.py +1227 -0
crackerjack/core/proactive_workflow.py +267 -0
crackerjack/core/resource_manager.py +425 -0
crackerjack/core/retry.py +275 -0
crackerjack/core/service_watchdog.py +601 -0
crackerjack/core/session_coordinator.py +239 -0
crackerjack/core/timeout_manager.py +563 -0
crackerjack/core/websocket_lifecycle.py +410 -0
crackerjack/core/workflow/__init__.py +21 -0
crackerjack/core/workflow/workflow_ai_coordinator.py +863 -0
crackerjack/core/workflow/workflow_event_orchestrator.py +1107 -0
crackerjack/core/workflow/workflow_issue_parser.py +714 -0
crackerjack/core/workflow/workflow_phase_executor.py +1158 -0
crackerjack/core/workflow/workflow_security_gates.py +400 -0
crackerjack/core/workflow_orchestrator.py +2243 -0
crackerjack/data/README.md +11 -0
crackerjack/data/__init__.py +8 -0
crackerjack/data/models.py +79 -0
crackerjack/data/repository.py +210 -0
crackerjack/decorators/README.md +180 -0
crackerjack/decorators/__init__.py +35 -0
crackerjack/decorators/error_handling.py +649 -0
crackerjack/decorators/error_handling_decorators.py +334 -0
crackerjack/decorators/helpers.py +58 -0
crackerjack/decorators/patterns.py +281 -0
crackerjack/decorators/utils.py +58 -0
crackerjack/docs/INDEX.md +11 -0
crackerjack/docs/README.md +11 -0
crackerjack/docs/generated/api/API_REFERENCE.md +10895 -0
crackerjack/docs/generated/api/CLI_REFERENCE.md +109 -0
crackerjack/docs/generated/api/CROSS_REFERENCES.md +1755 -0
crackerjack/docs/generated/api/PROTOCOLS.md +3 -0
crackerjack/docs/generated/api/SERVICES.md +1252 -0
crackerjack/documentation/README.md +11 -0
crackerjack/documentation/__init__.py +31 -0
crackerjack/documentation/ai_templates.py +756 -0
crackerjack/documentation/dual_output_generator.py +767 -0
crackerjack/documentation/mkdocs_integration.py +518 -0
crackerjack/documentation/reference_generator.py +1065 -0
crackerjack/dynamic_config.py +678 -0
crackerjack/errors.py +378 -0
crackerjack/events/README.md +11 -0
crackerjack/events/__init__.py +16 -0
crackerjack/events/telemetry.py +175 -0
crackerjack/events/workflow_bus.py +346 -0
crackerjack/exceptions/README.md +301 -0
crackerjack/exceptions/__init__.py +5 -0
crackerjack/exceptions/config.py +4 -0
crackerjack/exceptions/tool_execution_error.py +245 -0
crackerjack/executors/README.md +591 -0
crackerjack/executors/__init__.py +13 -0
crackerjack/executors/async_hook_executor.py +938 -0
crackerjack/executors/cached_hook_executor.py +316 -0
crackerjack/executors/hook_executor.py +1295 -0
crackerjack/executors/hook_lock_manager.py +708 -0
crackerjack/executors/individual_hook_executor.py +739 -0
crackerjack/executors/lsp_aware_hook_executor.py +349 -0
crackerjack/executors/progress_hook_executor.py +282 -0
crackerjack/executors/tool_proxy.py +433 -0
crackerjack/hooks/README.md +485 -0
crackerjack/hooks/lsp_hook.py +93 -0
crackerjack/intelligence/README.md +557 -0
crackerjack/intelligence/__init__.py +37 -0
crackerjack/intelligence/adaptive_learning.py +693 -0
crackerjack/intelligence/agent_orchestrator.py +485 -0
crackerjack/intelligence/agent_registry.py +377 -0
crackerjack/intelligence/agent_selector.py +439 -0
crackerjack/intelligence/integration.py +250 -0
crackerjack/interactive.py +719 -0
crackerjack/managers/README.md +369 -0
crackerjack/managers/__init__.py +11 -0
crackerjack/managers/async_hook_manager.py +135 -0
crackerjack/managers/hook_manager.py +585 -0
crackerjack/managers/publish_manager.py +631 -0
crackerjack/managers/test_command_builder.py +391 -0
crackerjack/managers/test_executor.py +474 -0
crackerjack/managers/test_manager.py +1357 -0
crackerjack/managers/test_progress.py +187 -0
crackerjack/mcp/README.md +374 -0
crackerjack/mcp/__init__.py +0 -0
crackerjack/mcp/cache.py +352 -0
crackerjack/mcp/client_runner.py +121 -0
crackerjack/mcp/context.py +802 -0
crackerjack/mcp/dashboard.py +657 -0
crackerjack/mcp/enhanced_progress_monitor.py +493 -0
crackerjack/mcp/file_monitor.py +394 -0
crackerjack/mcp/progress_components.py +607 -0
crackerjack/mcp/progress_monitor.py +1016 -0
crackerjack/mcp/rate_limiter.py +336 -0
crackerjack/mcp/server.py +24 -0
crackerjack/mcp/server_core.py +526 -0
crackerjack/mcp/service_watchdog.py +505 -0
crackerjack/mcp/state.py +407 -0
crackerjack/mcp/task_manager.py +259 -0
crackerjack/mcp/tools/README.md +27 -0
crackerjack/mcp/tools/__init__.py +19 -0
crackerjack/mcp/tools/core_tools.py +469 -0
crackerjack/mcp/tools/error_analyzer.py +283 -0
crackerjack/mcp/tools/execution_tools.py +384 -0
crackerjack/mcp/tools/intelligence_tool_registry.py +46 -0
crackerjack/mcp/tools/intelligence_tools.py +264 -0
crackerjack/mcp/tools/monitoring_tools.py +628 -0
crackerjack/mcp/tools/proactive_tools.py +367 -0
crackerjack/mcp/tools/progress_tools.py +222 -0
crackerjack/mcp/tools/semantic_tools.py +584 -0
crackerjack/mcp/tools/utility_tools.py +358 -0
crackerjack/mcp/tools/workflow_executor.py +699 -0
crackerjack/mcp/websocket/README.md +31 -0
crackerjack/mcp/websocket/__init__.py +14 -0
crackerjack/mcp/websocket/app.py +54 -0
crackerjack/mcp/websocket/endpoints.py +492 -0
crackerjack/mcp/websocket/event_bridge.py +188 -0
crackerjack/mcp/websocket/jobs.py +406 -0
crackerjack/mcp/websocket/monitoring/__init__.py +25 -0
crackerjack/mcp/websocket/monitoring/api/__init__.py +19 -0
crackerjack/mcp/websocket/monitoring/api/dependencies.py +141 -0
crackerjack/mcp/websocket/monitoring/api/heatmap.py +154 -0
crackerjack/mcp/websocket/monitoring/api/intelligence.py +199 -0
crackerjack/mcp/websocket/monitoring/api/metrics.py +203 -0
crackerjack/mcp/websocket/monitoring/api/telemetry.py +101 -0
crackerjack/mcp/websocket/monitoring/dashboard.py +18 -0
crackerjack/mcp/websocket/monitoring/factory.py +109 -0
crackerjack/mcp/websocket/monitoring/filters.py +10 -0
crackerjack/mcp/websocket/monitoring/metrics.py +64 -0
crackerjack/mcp/websocket/monitoring/models.py +90 -0
crackerjack/mcp/websocket/monitoring/utils.py +171 -0
crackerjack/mcp/websocket/monitoring/websocket_manager.py +78 -0
crackerjack/mcp/websocket/monitoring/websockets/__init__.py +17 -0
crackerjack/mcp/websocket/monitoring/websockets/dependencies.py +126 -0
crackerjack/mcp/websocket/monitoring/websockets/heatmap.py +176 -0
crackerjack/mcp/websocket/monitoring/websockets/intelligence.py +291 -0
crackerjack/mcp/websocket/monitoring/websockets/metrics.py +291 -0
crackerjack/mcp/websocket/monitoring_endpoints.py +21 -0
crackerjack/mcp/websocket/server.py +174 -0
crackerjack/mcp/websocket/websocket_handler.py +276 -0
crackerjack/mcp/websocket_server.py +10 -0
crackerjack/models/README.md +308 -0
crackerjack/models/__init__.py +40 -0
crackerjack/models/config.py +730 -0
crackerjack/models/config_adapter.py +265 -0
crackerjack/models/protocols.py +1535 -0
crackerjack/models/pydantic_models.py +320 -0
crackerjack/models/qa_config.py +145 -0
crackerjack/models/qa_results.py +134 -0
crackerjack/models/resource_protocols.py +299 -0
crackerjack/models/results.py +35 -0
crackerjack/models/semantic_models.py +258 -0
crackerjack/models/task.py +173 -0
crackerjack/models/test_models.py +60 -0
crackerjack/monitoring/README.md +11 -0
crackerjack/monitoring/__init__.py +0 -0
crackerjack/monitoring/ai_agent_watchdog.py +405 -0
crackerjack/monitoring/metrics_collector.py +427 -0
crackerjack/monitoring/regression_prevention.py +580 -0
crackerjack/monitoring/websocket_server.py +406 -0
crackerjack/orchestration/README.md +340 -0
crackerjack/orchestration/__init__.py +43 -0
crackerjack/orchestration/advanced_orchestrator.py +894 -0
crackerjack/orchestration/cache/README.md +312 -0
crackerjack/orchestration/cache/__init__.py +37 -0
crackerjack/orchestration/cache/memory_cache.py +338 -0
crackerjack/orchestration/cache/tool_proxy_cache.py +340 -0
crackerjack/orchestration/config.py +297 -0
crackerjack/orchestration/coverage_improvement.py +180 -0
crackerjack/orchestration/execution_strategies.py +361 -0
crackerjack/orchestration/hook_orchestrator.py +1398 -0
crackerjack/orchestration/strategies/README.md +401 -0
crackerjack/orchestration/strategies/__init__.py +39 -0
crackerjack/orchestration/strategies/adaptive_strategy.py +630 -0
crackerjack/orchestration/strategies/parallel_strategy.py +237 -0
crackerjack/orchestration/strategies/sequential_strategy.py +299 -0
crackerjack/orchestration/test_progress_streamer.py +647 -0
crackerjack/plugins/README.md +11 -0
crackerjack/plugins/__init__.py +15 -0
crackerjack/plugins/base.py +200 -0
crackerjack/plugins/hooks.py +254 -0
crackerjack/plugins/loader.py +335 -0
crackerjack/plugins/managers.py +264 -0
crackerjack/py313.py +191 -0
crackerjack/security/README.md +11 -0
crackerjack/security/__init__.py +0 -0
crackerjack/security/audit.py +197 -0
crackerjack/services/README.md +374 -0
crackerjack/services/__init__.py +9 -0
crackerjack/services/ai/README.md +295 -0
crackerjack/services/ai/__init__.py +7 -0
crackerjack/services/ai/advanced_optimizer.py +878 -0
crackerjack/services/ai/contextual_ai_assistant.py +542 -0
crackerjack/services/ai/embeddings.py +444 -0
crackerjack/services/ai/intelligent_commit.py +328 -0
crackerjack/services/ai/predictive_analytics.py +510 -0
crackerjack/services/anomaly_detector.py +392 -0
crackerjack/services/api_extractor.py +617 -0
crackerjack/services/backup_service.py +467 -0
crackerjack/services/bounded_status_operations.py +530 -0
crackerjack/services/cache.py +369 -0
crackerjack/services/changelog_automation.py +399 -0
crackerjack/services/command_execution_service.py +305 -0
crackerjack/services/config_integrity.py +132 -0
crackerjack/services/config_merge.py +546 -0
crackerjack/services/config_service.py +198 -0
crackerjack/services/config_template.py +493 -0
crackerjack/services/coverage_badge_service.py +173 -0
crackerjack/services/coverage_ratchet.py +381 -0
crackerjack/services/debug.py +733 -0
crackerjack/services/dependency_analyzer.py +460 -0
crackerjack/services/dependency_monitor.py +622 -0
crackerjack/services/documentation_generator.py +493 -0
crackerjack/services/documentation_service.py +704 -0
crackerjack/services/enhanced_filesystem.py +497 -0
crackerjack/services/enterprise_optimizer.py +865 -0
crackerjack/services/error_pattern_analyzer.py +676 -0
crackerjack/services/file_filter.py +221 -0
crackerjack/services/file_hasher.py +149 -0
crackerjack/services/file_io_service.py +361 -0
crackerjack/services/file_modifier.py +615 -0
crackerjack/services/filesystem.py +381 -0
crackerjack/services/git.py +422 -0
crackerjack/services/health_metrics.py +615 -0
crackerjack/services/heatmap_generator.py +744 -0
crackerjack/services/incremental_executor.py +380 -0
crackerjack/services/initialization.py +823 -0
crackerjack/services/input_validator.py +668 -0
crackerjack/services/intelligent_commit.py +327 -0
crackerjack/services/log_manager.py +289 -0
crackerjack/services/logging.py +228 -0
crackerjack/services/lsp_client.py +628 -0
crackerjack/services/memory_optimizer.py +414 -0
crackerjack/services/metrics.py +587 -0
crackerjack/services/monitoring/README.md +30 -0
crackerjack/services/monitoring/__init__.py +9 -0
crackerjack/services/monitoring/dependency_monitor.py +678 -0
crackerjack/services/monitoring/error_pattern_analyzer.py +676 -0
crackerjack/services/monitoring/health_metrics.py +716 -0
crackerjack/services/monitoring/metrics.py +587 -0
crackerjack/services/monitoring/performance_benchmarks.py +410 -0
crackerjack/services/monitoring/performance_cache.py +388 -0
crackerjack/services/monitoring/performance_monitor.py +569 -0
crackerjack/services/parallel_executor.py +527 -0
crackerjack/services/pattern_cache.py +333 -0
crackerjack/services/pattern_detector.py +478 -0
crackerjack/services/patterns/__init__.py +142 -0
crackerjack/services/patterns/agents.py +107 -0
crackerjack/services/patterns/code/__init__.py +15 -0
crackerjack/services/patterns/code/detection.py +118 -0
crackerjack/services/patterns/code/imports.py +107 -0
crackerjack/services/patterns/code/paths.py +159 -0
crackerjack/services/patterns/code/performance.py +119 -0
crackerjack/services/patterns/code/replacement.py +36 -0
crackerjack/services/patterns/core.py +212 -0
crackerjack/services/patterns/documentation/__init__.py +14 -0
crackerjack/services/patterns/documentation/badges_markdown.py +96 -0
crackerjack/services/patterns/documentation/comments_blocks.py +83 -0
crackerjack/services/patterns/documentation/docstrings.py +89 -0
crackerjack/services/patterns/formatting.py +226 -0
crackerjack/services/patterns/operations.py +339 -0
crackerjack/services/patterns/security/__init__.py +23 -0
crackerjack/services/patterns/security/code_injection.py +122 -0
crackerjack/services/patterns/security/credentials.py +190 -0
crackerjack/services/patterns/security/path_traversal.py +221 -0
crackerjack/services/patterns/security/unsafe_operations.py +216 -0
crackerjack/services/patterns/templates.py +62 -0
crackerjack/services/patterns/testing/__init__.py +18 -0
crackerjack/services/patterns/testing/error_patterns.py +107 -0
crackerjack/services/patterns/testing/pytest_output.py +126 -0
crackerjack/services/patterns/tool_output/__init__.py +16 -0
crackerjack/services/patterns/tool_output/bandit.py +72 -0
crackerjack/services/patterns/tool_output/other.py +97 -0
crackerjack/services/patterns/tool_output/pyright.py +67 -0
crackerjack/services/patterns/tool_output/ruff.py +44 -0
crackerjack/services/patterns/url_sanitization.py +114 -0
crackerjack/services/patterns/utilities.py +42 -0
crackerjack/services/patterns/utils.py +339 -0
crackerjack/services/patterns/validation.py +46 -0
crackerjack/services/patterns/versioning.py +62 -0
crackerjack/services/predictive_analytics.py +523 -0
crackerjack/services/profiler.py +280 -0
crackerjack/services/quality/README.md +415 -0
crackerjack/services/quality/__init__.py +11 -0
crackerjack/services/quality/anomaly_detector.py +392 -0
crackerjack/services/quality/pattern_cache.py +333 -0
crackerjack/services/quality/pattern_detector.py +479 -0
crackerjack/services/quality/qa_orchestrator.py +491 -0
crackerjack/services/quality/quality_baseline.py +395 -0
crackerjack/services/quality/quality_baseline_enhanced.py +649 -0
crackerjack/services/quality/quality_intelligence.py +949 -0
crackerjack/services/regex_patterns.py +58 -0
crackerjack/services/regex_utils.py +483 -0
crackerjack/services/secure_path_utils.py +524 -0
crackerjack/services/secure_status_formatter.py +450 -0
crackerjack/services/secure_subprocess.py +635 -0
crackerjack/services/security.py +239 -0
crackerjack/services/security_logger.py +495 -0
crackerjack/services/server_manager.py +411 -0
crackerjack/services/smart_scheduling.py +167 -0
crackerjack/services/status_authentication.py +460 -0
crackerjack/services/status_security_manager.py +315 -0
crackerjack/services/terminal_utils.py +0 -0
crackerjack/services/thread_safe_status_collector.py +441 -0
crackerjack/services/tool_filter.py +368 -0
crackerjack/services/tool_version_service.py +43 -0
crackerjack/services/unified_config.py +115 -0
crackerjack/services/validation_rate_limiter.py +220 -0
crackerjack/services/vector_store.py +689 -0
crackerjack/services/version_analyzer.py +461 -0
crackerjack/services/version_checker.py +223 -0
crackerjack/services/websocket_resource_limiter.py +438 -0
crackerjack/services/zuban_lsp_service.py +391 -0
crackerjack/slash_commands/README.md +11 -0
crackerjack/slash_commands/__init__.py +59 -0
crackerjack/slash_commands/init.md +112 -0
crackerjack/slash_commands/run.md +197 -0
crackerjack/slash_commands/status.md +127 -0
crackerjack/tools/README.md +11 -0
crackerjack/tools/__init__.py +30 -0
crackerjack/tools/_git_utils.py +105 -0
crackerjack/tools/check_added_large_files.py +139 -0
crackerjack/tools/check_ast.py +105 -0
crackerjack/tools/check_json.py +103 -0
crackerjack/tools/check_jsonschema.py +297 -0
crackerjack/tools/check_toml.py +103 -0
crackerjack/tools/check_yaml.py +110 -0
crackerjack/tools/codespell_wrapper.py +72 -0
crackerjack/tools/end_of_file_fixer.py +202 -0
crackerjack/tools/format_json.py +128 -0
crackerjack/tools/mdformat_wrapper.py +114 -0
crackerjack/tools/trailing_whitespace.py +198 -0
crackerjack/tools/validate_input_validator_patterns.py +236 -0
crackerjack/tools/validate_regex_patterns.py +188 -0
crackerjack/ui/README.md +11 -0
crackerjack/ui/__init__.py +1 -0
crackerjack/ui/dashboard_renderer.py +28 -0
crackerjack/ui/templates/README.md +11 -0
crackerjack/utils/console_utils.py +13 -0
crackerjack/utils/dependency_guard.py +230 -0
crackerjack/utils/retry_utils.py +275 -0
crackerjack/workflows/README.md +590 -0
crackerjack/workflows/__init__.py +46 -0
crackerjack/workflows/actions.py +811 -0
crackerjack/workflows/auto_fix.py +444 -0
crackerjack/workflows/container_builder.py +499 -0
crackerjack/workflows/definitions.py +443 -0
crackerjack/workflows/engine.py +177 -0
crackerjack/workflows/event_bridge.py +242 -0
crackerjack-0.45.2.dist-info/METADATA +1678 -0
crackerjack-0.45.2.dist-info/RECORD +478 -0
{crackerjack-0.18.2.dist-info → crackerjack-0.45.2.dist-info}/WHEEL +1 -1
crackerjack-0.45.2.dist-info/entry_points.txt +2 -0
crackerjack/.gitignore +0 -14
crackerjack/.libcst.codemod.yaml +0 -18
crackerjack/.pdm.toml +0 -1
crackerjack/.pre-commit-config.yaml +0 -91
crackerjack/.pytest_cache/.gitignore +0 -2
crackerjack/.pytest_cache/CACHEDIR.TAG +0 -4
crackerjack/.pytest_cache/README.md +0 -8
crackerjack/.pytest_cache/v/cache/nodeids +0 -1
crackerjack/.pytest_cache/v/cache/stepwise +0 -1
crackerjack/.ruff_cache/.gitignore +0 -1
crackerjack/.ruff_cache/0.1.11/3256171999636029978 +0 -0
crackerjack/.ruff_cache/0.1.14/602324811142551221 +0 -0
crackerjack/.ruff_cache/0.1.4/10355199064880463147 +0 -0
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crackerjack/.ruff_cache/0.11.7/3557596832929915217 +0 -0
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crackerjack/.ruff_cache/0.2.0/10047773857155985907 +0 -0
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crackerjack/.ruff_cache/0.6.4/1206147804896221174 +0 -0
crackerjack/.ruff_cache/0.6.5/1206147804896221174 +0 -0
crackerjack/.ruff_cache/0.6.7/3657366982708166874 +0 -0
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crackerjack/.ruff_cache/0.7.1/1024065805990144819 +0 -0
crackerjack/.ruff_cache/0.7.1/285614542852677309 +0 -0
crackerjack/.ruff_cache/0.7.3/16061516852537040135 +0 -0
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crackerjack/.ruff_cache/0.9.3/13948373885254993391 +0 -0
crackerjack/.ruff_cache/0.9.9/12813592349865671909 +0 -0
crackerjack/.ruff_cache/0.9.9/8843823720003377982 +0 -0
crackerjack/.ruff_cache/CACHEDIR.TAG +0 -1
crackerjack/crackerjack.py +0 -855
crackerjack/pyproject.toml +0 -214
crackerjack-0.18.2.dist-info/METADATA +0 -420
crackerjack-0.18.2.dist-info/RECORD +0 -59
crackerjack-0.18.2.dist-info/entry_points.txt +0 -4
{crackerjack-0.18.2.dist-info → crackerjack-0.45.2.dist-info}/licenses/LICENSE +0 -0

crackerjack/docs/generated/api/CROSS_REFERENCES.md ADDED Viewed

@@ -0,0 +1,1755 @@
+# Cross References
+This document shows where API components are used throughout the codebase.
+## AIRecommendation
+**Referenced in:**
+- ContextualAIAssistant.display_recommendations() parameter
+## APIExtractorProtocol
+**Referenced in:**
+- APIExtractorImpl base class
+- DocumentationServiceImpl.__init__() parameter
+## AbstractFileResource
+**Referenced in:**
+- AtomicFileWriter base class
+- LockedFileResource base class
+- SafeDirectoryCreator base class
+## AbstractManagedResource
+**Referenced in:**
+- AbstractFileResource base class
+- AbstractProcessResource base class
+- AbstractTaskResource base class
+- AbstractNetworkResource base class
+## AccessLevel
+**Referenced in:**
+- StatusAuthenticator.__init__() parameter
+- StatusAuthenticator.\_has_sufficient_access_level() parameter
+- StatusAuthenticator.\_has_sufficient_access_level() parameter
+- StatusAuthenticator.is_operation_allowed() parameter
+- StatusAuthenticator.add_api_key() parameter
+## AgentCapability
+**Referenced in:**
+- AgentSelector.\_generate_score_reasoning() parameter
+- AgentSelector.\_assess_complexity() parameter
+- AgentSelector.\_generate_recommendations() parameter
+- AgentRegistry.get_agents_by_capability() parameter
+## AgentContext
+**Referenced in:**
+- AgentCoordinator.__init__() parameter
+- ProactiveAgent.__init__() parameter
+- PerformanceAgent.__init__() parameter
+- TestSpecialistAgent.__init__() parameter
+- SecurityAgent.__init__() parameter
+- FormattingAgent.__init__() parameter
+- TestCreationAgent.__init__() parameter
+- ImportOptimizationAgent.__init__() parameter
+- SubAgent.__init__() parameter
+- AgentRegistry.create_all() parameter
+## AgentPerformanceMetrics
+**Referenced in:**
+- AdaptiveLearningSystem.\_update_basic_counters() parameter
+- AdaptiveLearningSystem.\_update_execution_averages() parameter
+- AdaptiveLearningSystem.\_update_capability_success_rates() parameter
+- AdaptiveLearningSystem.\_update_performance_trend() parameter
+- AdaptiveLearningSystem.\_calculate_metrics_score() parameter
+## AgentRegistry
+**Referenced in:**
+- AgentSelector.__init__() parameter
+- AgentOrchestrator.__init__() parameter
+## AgentScore
+**Referenced in:**
+- AgentSelector.\_assess_complexity() parameter
+- AgentSelector.\_generate_recommendations() parameter
+- AgentOrchestrator.\_generate_recommendations() parameter
+## AgentSelector
+**Referenced in:**
+- AgentOrchestrator.__init__() parameter
+## AntiPattern
+**Referenced in:**
+- PatternDetector.\_generate_solution_key() parameter
+- PatternDetector.\_find_cached_pattern_for_anti_pattern() parameter
+- PatternDetector.\_create_temp_issue_for_lookup() parameter
+## AsyncCleanupProtocol
+**Referenced in:**
+- ResourceManagerProtocol.register_resource() parameter
+## AuthCredentials
+**Referenced in:**
+- StatusAuthenticator.\_validate_credentials() parameter
+- StatusAuthenticator.\_check_operation_access() parameter
+## AuthenticationError
+**Referenced in:**
+- AccessDeniedError base class
+- ExpiredCredentialsError base class
+## BackupMetadata
+**Referenced in:**
+- CodeCleaner.\_handle_no_files_to_process() parameter
+- CodeCleaner.\_execute_cleaning_with_backup() parameter
+- CodeCleaner.\_finalize_cleaning_result() parameter
+- CodeCleaner.\_handle_cleaning_failure() parameter
+- CodeCleaner.\_handle_cleaning_success() parameter
+- CodeCleaner.\_handle_critical_error() parameter
+- CodeCleaner.\_attempt_emergency_restoration() parameter
+- CodeCleaner.restore_from_backup_metadata() parameter
+- CodeCleaner.restore_emergency_backup() parameter
+- CodeCleaner.verify_backup_integrity() parameter
+- PackageBackupService.restore_from_backup() parameter
+- PackageBackupService.cleanup_backup() parameter
+- PackageBackupService.\_validate_backup() parameter
+- PackageBackupService.\_stage_backup_files() parameter
+- PackageBackupService.\_commit_restoration() parameter
+## BaseRustToolAdapter
+**Referenced in:**
+- ZubanAdapter base class
+- SkylsAdapter base class
+## BenchmarkResult
+**Referenced in:**
+- BenchmarkSuite.add_result() parameter
+## BenchmarkSuite
+**Referenced in:**
+- PerformanceBenchmarker.export_benchmark_results() parameter
+## CacheAnalytics
+**Referenced in:**
+- EnhancedCacheHandlers.\_create_analytics_table() parameter
+- EnhancedCacheHandlers.\_create_insights_panel() parameter
+- EnhancedCacheHandlers.\_generate_optimization_suggestions() parameter
+## CacheOptimizationSuggestion
+**Referenced in:**
+- EnhancedCacheHandlers.\_create_suggestions_panel() parameter
+- EnhancedCacheHandlers.\_apply_optimization_suggestion() parameter
+## CachedHookExecutor
+**Referenced in:**
+- SmartCacheManager.__init__() parameter
+## ChangelogEntry
+**Referenced in:**
+- ChangelogGenerator.update_changelog() parameter
+- ChangelogGenerator.\_generate_changelog_section() parameter
+- ChangelogGenerator.\_display_changelog_preview() parameter
+## CleaningResult
+**Referenced in:**
+- CrackerjackAPI.\_report_safe_cleaning_results() parameter
+- CrackerjackAPI.\_report_cleaning_results() parameter
+- CleaningErrorHandler.log_cleaning_result() parameter
+- CodeCleaner.\_handle_cleaning_failure() parameter
+- CodeCleaner.\_handle_cleaning_success() parameter
+- PhaseCoordinator.\_report_package_cleaning_results() parameter
+## CleaningStepProtocol
+**Referenced in:**
+- CleaningPipeline.clean_file() parameter
+- CleaningPipeline.\_apply_cleaning_pipeline() parameter
+## CommandResult
+**Referenced in:**
+- EnhancedCommandRunner.handle_result() parameter
+## Config
+**Referenced in:**
+- DynamicConfigGenerator.\_should_include_hook() parameter
+- ServiceWatchdog.add_service() parameter
+- AsyncTimeoutManager.__init__() parameter
+- PhaseCoordinator.__init__() parameter
+- ServiceWatchdog.__init__() parameter
+- ServiceWatchdog.\_determine_restart_reason() parameter
+- ServiceWatchdog.\_get_service_status() parameter
+- ServiceWatchdog.\_get_service_health() parameter
+- ResourceMonitor.__init__() parameter
+- RateLimitMiddleware.__init__() parameter
+- MCPServerContext.__init__() parameter
+- MCPContextManager.__init__() parameter
+- StrategySelector.select_strategy() parameter
+- OrchestrationPlanner.create_execution_plan() parameter
+- OrchestrationPlanner.\_create_test_plan() parameter
+- OrchestrationPlanner.\_create_ai_plan() parameter
+- ProgressStreamer.__init__() parameter
+- AdvancedWorkflowOrchestrator.__init__() parameter
+- SecureSubprocessExecutor.__init__() parameter
+- InitializationService.__init__() parameter
+- SecureInputValidator.__init__() parameter
+## ConfigMergeService
+**Referenced in:**
+- PhaseCoordinator.__init__() parameter
+- InitializationService.__init__() parameter
+## ConfigMergeServiceProtocol
+**Referenced in:**
+- PhaseCoordinator.__init__() parameter
+- ConfigMergeService base class
+- InitializationService.__init__() parameter
+## ConfigMode
+**Referenced in:**
+- DynamicConfigGenerator.\_should_include_hook() parameter
+## ConfigSource
+**Referenced in:**
+- EnvironmentConfigSource base class
+- FileConfigSource base class
+- PyprojectConfigSource base class
+- OptionsConfigSource base class
+- DefaultConfigSource base class
+## ConnectionMetrics
+**Referenced in:**
+- WebSocketResourceLimiter.\_check_message_count() parameter
+## CoverageRatchetProtocol
+**Referenced in:**
+- TestManager.__init__() parameter
+## CrackerjackCache
+**Referenced in:**
+- AgentCoordinator.__init__() parameter
+- EnhancedCacheHandlers.__init__() parameter
+- CachedHookExecutor.__init__() parameter
+- QualityBaselineService.__init__() parameter
+- FileHasher.__init__() parameter
+- EnhancedQualityBaselineService.__init__() parameter
+## CrackerjackError
+**Referenced in:**
+- Task.fail() parameter
+- ConfigError base class
+- ExecutionError base class
+- TestExecutionError base class
+- PublishError base class
+- GitError base class
+- FileError base class
+- CleaningError base class
+- NetworkError base class
+- DependencyError base class
+- ResourceError base class
+- ValidationError base class
+- TimeoutError base class
+- SecurityError base class
+- InteractiveTask.fail() parameter
+## CustomHookDefinition
+**Referenced in:**
+- CustomHookPlugin.__init__() parameter
+- CustomHookPlugin.\_execute_command_hook() parameter
+## DependencyContainer
+**Referenced in:**
+- DependencyResolver.__init__() parameter
+- ServiceCollectionBuilder.__init__() parameter
+## DependencyVulnerability
+**Referenced in:**
+- DependencyMonitorService.\_run_vulnerability_tool() parameter
+- DependencyMonitorService.\_process_vulnerability_result() parameter
+- DependencyMonitorService.\_report_vulnerabilities() parameter
+## DocumentationGeneratorProtocol
+**Referenced in:**
+- DocumentationGeneratorImpl base class
+- DocumentationServiceImpl.__init__() parameter
+## DocumentationServiceProtocol
+**Referenced in:**
+- DocumentationServiceImpl base class
+## EnhancedDependencyContainer
+**Referenced in:**
+- DependencyResolver.__init__() parameter
+- ServiceCollectionBuilder.__init__() parameter
+## EnhancedNestedLoopAnalyzer
+**Referenced in:**
+- PerformanceAgent.\_build_nested_loop_issues() parameter
+## EnhancedUsageAnalyzer
+**Referenced in:**
+- UsageDataCollector.get_results() parameter
+## ErrorCode
+**Referenced in:**
+- CrackerjackError.__init__() parameter
+- ConfigError.__init__() parameter
+- ExecutionError.__init__() parameter
+- TestExecutionError.__init__() parameter
+- FileError.__init__() parameter
+## ErrorHandlingMixin
+**Referenced in:**
+- PhaseCoordinator base class
+## ErrorPattern
+**Referenced in:**
+- ErrorCache.\_update_existing_pattern() parameter
+- ErrorCache.\_update_existing_pattern() parameter
+- ErrorCache.\_merge_fixes() parameter
+## ExecutionContext
+**Referenced in:**
+- ZubanAdapter.__init__() parameter
+- RustToolHookManager.__init__() parameter
+- RustToolAdapter.__init__() parameter
+- BaseRustToolAdapter.__init__() parameter
+- SkylsAdapter.__init__() parameter
+- StrategySelector.select_strategy() parameter
+- StrategySelector.\_select_adaptive_strategy() parameter
+- StrategySelector.select_hook_subset() parameter
+- StrategySelector.\_create_selective_strategy() parameter
+- OrchestrationPlanner.create_execution_plan() parameter
+- OrchestrationPlanner.\_create_test_plan() parameter
+- OrchestrationPlanner.\_create_ai_plan() parameter
+- AdvancedWorkflowOrchestrator.\_adapt_execution_plan() parameter
+## ExecutionPlan
+**Referenced in:**
+- AdvancedWorkflowOrchestrator.\_adapt_execution_plan() parameter
+## ExecutionRecord
+**Referenced in:**
+- AdaptiveLearningSystem.\_update_basic_counters() parameter
+- AdaptiveLearningSystem.\_update_execution_averages() parameter
+- AdaptiveLearningSystem.\_update_capability_success_rates() parameter
+- AdaptiveLearningSystem.\_calculate_windowed_success_rates() parameter
+## ExecutionStrategy
+**Referenced in:**
+- AgentOrchestrator.\_create_error_result() parameter
+- StrategySelector.select_hook_subset() parameter
+- OrchestrationPlanner.\_create_test_plan() parameter
+- ParallelHookExecutor.__init__() parameter
+## FailedGitResult
+**Referenced in:**
+- GitService.\_handle_commit_failure() parameter
+- GitService.\_handle_hook_error() parameter
+## FileHasher
+**Referenced in:**
+- SmartFileWatcher.__init__() parameter
+## FileSystemInterface
+**Referenced in:**
+- PhaseCoordinator.__init__() parameter
+- PublishManagerImpl.__init__() parameter
+- EnhancedFileSystemService base class
+- HealthMetricsService.__init__() parameter
+- ConfigMergeService.__init__() parameter
+- ContextualAIAssistant.__init__() parameter
+- DependencyMonitorService.__init__() parameter
+## FileSystemService
+**Referenced in:**
+- InitializationService.__init__() parameter
+## FixResult
+**Referenced in:**
+- AsyncWorkflowPipeline.\_report_fix_results() parameter
+- AsyncWorkflowPipeline.\_report_successful_fixes() parameter
+- AsyncWorkflowPipeline.\_report_failed_fixes() parameter
+- ProactiveAgent.\_cache_successful_pattern() parameter
+- AgentTracker.track_agent_complete() parameter
+- FixResult.merge_with() parameter
+- RegressionPreventionSystem.\_check_pattern_match() parameter
+- RegressionPreventionSystem.\_build_failure_text() parameter
+- RegressionPreventionSystem.\_check_agent_specific_failure() parameter
+- PatternCache.cache_successful_pattern() parameter
+## GitInterface
+**Referenced in:**
+- PhaseCoordinator.__init__() parameter
+- ConfigMergeService.__init__() parameter
+## GitService
+**Referenced in:**
+- ChangelogGenerator.__init__() parameter
+- CommitMessageGenerator.__init__() parameter
+- InitializationService.__init__() parameter
+## HookDefinition
+**Referenced in:**
+- CustomHookPlugin.__init__() parameter
+- CustomHookPlugin.\_execute_command_hook() parameter
+- CachedHookExecutor.\_is_cache_valid() parameter
+- HookExecutor.execute_single_hook() parameter
+- HookExecutor.\_run_hook_subprocess() parameter
+- HookExecutor.\_create_hook_result_from_process() parameter
+- HookExecutor.\_extract_issues_from_process_output() parameter
+- HookExecutor.\_create_timeout_result() parameter
+- HookExecutor.\_create_error_result() parameter
+- ParallelHookExecutor.analyze_hook_dependencies() parameter
+- ParallelHookExecutor.can_execute_in_parallel() parameter
+- ParallelHookExecutor.can_execute_in_parallel() parameter
+- ParallelHookExecutor.\_can_parallelize_group() parameter
+## HookExecutor
+**Referenced in:**
+- SmartCacheManager.__init__() parameter
+## HookLockManager
+**Referenced in:**
+- AsyncHookExecutor.__init__() parameter
+- IndividualHookExecutor.__init__() parameter
+## HookLockManagerProtocol
+**Referenced in:**
+- AsyncHookExecutor.__init__() parameter
+- IndividualHookExecutor.__init__() parameter
+## HookManager
+**Referenced in:**
+- PhaseCoordinator.__init__() parameter
+- SecurityAwareHookManager base class
+## HookMetadata
+**Referenced in:**
+- DynamicConfigGenerator.\_should_include_hook() parameter
+- DynamicConfigGenerator.group_hooks_by_repo() parameter
+## HookPluginBase
+**Referenced in:**
+- CustomHookPlugin base class
+- HookPluginRegistry.register_hook_plugin() parameter
+## HookPluginRegistry
+**Referenced in:**
+- PluginManager.__init__() parameter
+## HookProgress
+**Referenced in:**
+- IndividualHookExecutor.set_progress_callback() parameter
+- IndividualHookExecutor.\_update_hook_progress_status() parameter
+- IndividualHookExecutor.\_create_stream_reader_tasks() parameter
+- IndividualHookExecutor.\_update_progress_with_line() parameter
+- IndividualHookExecutor.\_maybe_callback_progress() parameter
+- IndividualHookExecutor.\_print_hook_summary() parameter
+- IndividualHookExecutor.\_print_individual_summary() parameter
+- MinimalProgressStreamer.update_hook_progress() parameter
+- ProgressStreamer.update_hook_progress() parameter
+## HookResult
+**Referenced in:**
+- HookManagerImpl.get_hook_summary() parameter
+- AsyncHookManager.get_hook_summary() parameter
+- AsyncHookExecutor.\_display_hook_result() parameter
+- AsyncHookExecutor.\_print_summary() parameter
+- IndividualHookExecutor.\_update_hook_progress_status() parameter
+- IndividualHookExecutor.\_print_hook_summary() parameter
+- IndividualHookExecutor.\_print_individual_summary() parameter
+- CachedHookExecutor.\_is_cache_valid() parameter
+- HookExecutor.\_display_hook_result() parameter
+- HookExecutor.\_handle_retries() parameter
+- HookExecutor.\_retry_formatting_hooks() parameter
+- HookExecutor.\_retry_all_hooks() parameter
+- HookExecutor.\_print_summary() parameter
+- CorrelationTracker.record_iteration() parameter
+- CrackerjackCache.set_hook_result() parameter
+- CrackerjackCache.set_expensive_hook_result() parameter
+## HookStrategy
+**Referenced in:**
+- AsyncHookExecutor.\_print_strategy_header() parameter
+- AsyncHookExecutor.\_print_summary() parameter
+- IndividualHookExecutor.\_finalize_execution_result() parameter
+- IndividualHookExecutor.\_print_strategy_header() parameter
+- IndividualHookExecutor.\_print_individual_summary() parameter
+- CachedHookExecutor.execute_strategy() parameter
+- CachedHookExecutor.\_get_relevant_files_for_strategy() parameter
+- CachedHookExecutor.\_strategy_affects_python_only() parameter
+- CachedHookExecutor.\_strategy_affects_config_only() parameter
+- SmartCacheManager.get_optimal_cache_strategy() parameter
+- HookExecutor.execute_strategy() parameter
+- HookExecutor.\_print_strategy_header() parameter
+- HookExecutor.\_execute_sequential() parameter
+- HookExecutor.\_execute_parallel() parameter
+- HookExecutor.\_handle_retries() parameter
+- HookExecutor.\_retry_formatting_hooks() parameter
+- HookExecutor.\_retry_all_hooks() parameter
+- HookExecutor.\_print_summary() parameter
+- StrategySelector.select_hook_subset() parameter
+- StrategySelector.\_create_selective_strategy() parameter
+- OrchestrationPlanner.create_execution_plan() parameter
+- OrchestrationPlanner.\_estimate_strategy_duration() parameter
+## ImportAnalysis
+**Referenced in:**
+- ImportOptimizationAgent.\_are_optimizations_needed() parameter
+- ImportOptimizationAgent.\_prepare_fix_results() parameter
+- ImportOptimizationAgent.\_apply_import_optimizations() parameter
+- ImportOptimizationAgent.\_apply_all_optimization_steps() parameter
+- ImportOptimizationAgent.\_extract_file_metrics() parameter
+## InteractiveTask
+**Referenced in:**
+- InteractiveTask.__init__() parameter
+- InteractiveWorkflowManager.execute_task() parameter
+- InteractiveWorkflowManager.\_handle_task_failure() parameter
+## Issue
+**Referenced in:**
+- ProactiveWorkflowPipeline.\_evaluate_planning_need() parameter
+- ArchitecturalAssessment.__init__() parameter
+- AsyncWorkflowPipeline.\_create_generic_issue() parameter
+- IntelligentAgentSystem.\_map_issue_to_task_context() parameter
+- AgentCoordinator.\_group_issues_by_type() parameter
+- AgentCoordinator.\_create_issue_hash() parameter
+- AgentCoordinator.\_prioritize_issues_by_plan() parameter
+- AgentCoordinator.\_should_use_architect_for_group() parameter
+- AgentCoordinator.\_is_critical_group() parameter
+- RefactoringAgent.\_has_complexity_markers() parameter
+- RefactoringAgent.\_has_dead_code_markers() parameter
+- RefactoringAgent.\_validate_complexity_issue() parameter
+- RefactoringAgent.\_validate_dead_code_issue() parameter
+- ProactiveAgent.\_get_planning_cache_key() parameter
+- ProactiveAgent.\_cache_successful_pattern() parameter
+- ArchitectAgent.\_get_specialist_approach() parameter
+- ArchitectAgent.\_get_internal_approach() parameter
+- ArchitectAgent.\_get_recommended_patterns() parameter
+- ArchitectAgent.\_get_cached_patterns_for_issue() parameter
+- ArchitectAgent.\_analyze_dependencies() parameter
+- ArchitectAgent.\_identify_risks() parameter
+- ArchitectAgent.\_get_validation_steps() parameter
+- PerformanceAgent.\_validate_performance_issue() parameter
+- DRYAgent.\_validate_dry_issue() parameter
+- AgentTracker.track_agent_processing() parameter
+- TestSpecialistAgent.\_check_general_test_failure() parameter
+- TestSpecialistAgent.\_identify_failure_type() parameter
+- SecurityAgent.\_identify_vulnerability_type() parameter
+- SecurityAgent.\_is_regex_validation_issue() parameter
+- TestCreationAgent.\_log_analysis() parameter
+- ImportOptimizationAgent.\_validate_issue() parameter
+- StateManager.\_process_stage_issues() parameter
+- TypeIssue base class
+- DeadCodeIssue base class
+- RegressionPreventionSystem.register_regression_pattern() parameter
+- RegressionPreventionSystem.\_generate_issue_signature() parameter
+- RegressionPreventionSystem.\_check_pattern_match() parameter
+- RegressionPreventionSystem.\_build_failure_text() parameter
+- RegressionPreventionSystem.\_check_agent_specific_failure() parameter
+- RegressionPreventionSystem.\_create_regression_alert() parameter
+- PatternCache.cache_successful_pattern() parameter
+- PatternCache.get_patterns_for_issue() parameter
+- PatternCache.get_best_pattern_for_issue() parameter
+- PatternDetector.\_create_temp_issue_for_lookup() parameter
+## IssueType
+**Referenced in:**
+- AsyncWorkflowPipeline.\_create_generic_issue() parameter
+- TestSpecialistAgent.\_check_general_test_failure() parameter
+- RegressionPreventionSystem.register_regression_pattern() parameter
+- RegressionPreventionSystem.\_generate_issue_signature() parameter
+- PatternDetector.\_create_temp_issue_for_lookup() parameter
+## JobManager
+**Referenced in:**
+- WebSocketHandler.__init__() parameter
+## LazyLoader
+**Referenced in:**
+- MemoryOptimizer.register_lazy_object() parameter
+## LearningInsight
+**Referenced in:**
+- AdaptiveLearningSystem.\_is_duplicate_insight() parameter
+## MCPServerConfig
+**Referenced in:**
+- MCPServerContext.__init__() parameter
+- MCPContextManager.__init__() parameter
+## MajorUpdate
+**Referenced in:**
+- DependencyMonitorService.\_report_major_updates() parameter
+## ManagedResource
+**Referenced in:**
+- ManagedWebSocketConnection base class
+- ManagedHTTPClient base class
+- ManagedWebSocketServer base class
+- ManagedSubprocess base class
+- ManagedTemporaryFile base class
+- ManagedTemporaryDirectory base class
+- ManagedProcess base class
+- ManagedTask base class
+- ManagedFileHandle base class
+## ManagedWebSocketServer
+**Referenced in:**
+- WebSocketHealthMonitor.add_server() parameter
+- WebSocketHealthMonitor.remove_server() parameter
+## OperationLimits
+**Referenced in:**
+- BoundedStatusOperations.__init__() parameter
+## OperationMetrics
+**Referenced in:**
+- BoundedStatusOperations.\_cleanup_operation() parameter
+## Options
+**Referenced in:**
+- CrackerjackAPI.run_interactive_workflow() parameter
+- InteractiveCLI.create_dynamic_workflow() parameter
+- InteractiveCLI.run_interactive_workflow() parameter
+- WorkflowPipeline.\_initialize_workflow_session() parameter
+- WorkflowPipeline.\_log_workflow_startup_debug() parameter
+- WorkflowPipeline.\_configure_session_cleanup() parameter
+- WorkflowPipeline.\_log_workflow_startup_info() parameter
+- WorkflowPipeline.\_is_publishing_workflow() parameter
+- WorkflowPipeline.\_execute_optional_cleaning_phase() parameter
+- WorkflowPipeline.\_start_iteration_tracking() parameter
+- WorkflowPipeline.\_run_initial_fast_hooks() parameter
+- WorkflowPipeline.\_finalize_ai_workflow_success() parameter
+- WorkflowPipeline.\_run_fast_hooks_phase() parameter
+- WorkflowPipeline.\_run_testing_phase() parameter
+- WorkflowPipeline.\_run_comprehensive_hooks_phase() parameter
+- WorkflowPipeline.\_run_code_cleaning_phase() parameter
+- WorkflowPipeline.\_run_post_cleaning_fast_hooks() parameter
+- WorkflowPipeline.\_execute_standard_hooks_workflow() parameter
+- WorkflowPipeline.\_initialize_ai_fixing_phase() parameter
+- WorkflowPipeline.\_prepare_ai_fixing_environment() parameter
+- WorkflowPipeline.\_check_security_gates_for_publishing() parameter
+- WorkflowPipeline.\_execute_monitored_fast_hooks_phase() parameter
+- WorkflowPipeline.\_execute_monitored_cleaning_phase() parameter
+- WorkflowPipeline.\_execute_monitored_comprehensive_phase() parameter
+- WorkflowOrchestrator.\_initialize_session_tracking() parameter
+- WorkflowOrchestrator.run_cleaning_phase() parameter
+- WorkflowOrchestrator.run_fast_hooks_only() parameter
+- WorkflowOrchestrator.run_comprehensive_hooks_only() parameter
+- WorkflowOrchestrator.run_hooks_phase() parameter
+- WorkflowOrchestrator.run_testing_phase() parameter
+- WorkflowOrchestrator.run_publishing_phase() parameter
+- WorkflowOrchestrator.run_commit_phase() parameter
+- WorkflowOrchestrator.run_configuration_phase() parameter
+- AsyncWorkflowPipeline.\_create_parallel_tasks() parameter
+- AsyncWorkflowOrchestrator.run_complete_workflow() parameter
+- AsyncWorkflowOrchestrator.run_cleaning_phase() parameter
+- AsyncWorkflowOrchestrator.run_fast_hooks_only() parameter
+- AsyncWorkflowOrchestrator.run_comprehensive_hooks_only() parameter
+- AsyncWorkflowOrchestrator.run_hooks_phase() parameter
+- AsyncWorkflowOrchestrator.run_testing_phase() parameter
+- AsyncWorkflowOrchestrator.run_publishing_phase() parameter
+- AsyncWorkflowOrchestrator.run_commit_phase() parameter
+- AsyncWorkflowOrchestrator.run_configuration_phase() parameter
+- SessionCoordinator.initialize_session_tracking() parameter
+- PhaseCoordinator.run_cleaning_phase() parameter
+- PhaseCoordinator.run_configuration_phase() parameter
+- PhaseCoordinator.\_execute_configuration_steps() parameter
+- PhaseCoordinator.\_handle_smart_config_merge() parameter
+- PhaseCoordinator.\_update_configuration_files() parameter
+- PhaseCoordinator.\_perform_smart_config_merge() parameter
+- PhaseCoordinator.run_hooks_phase() parameter
+- PhaseCoordinator.run_fast_hooks_only() parameter
+- PhaseCoordinator.run_comprehensive_hooks_only() parameter
+- PhaseCoordinator.run_testing_phase() parameter
+- PhaseCoordinator.run_publishing_phase() parameter
+- PhaseCoordinator.\_determine_version_type() parameter
+- PhaseCoordinator.\_execute_publishing_workflow() parameter
+- PhaseCoordinator.\_handle_successful_publish() parameter
+- PhaseCoordinator.run_commit_phase() parameter
+- PhaseCoordinator.execute_hooks_with_retry() parameter
+- PhaseCoordinator.\_get_commit_message() parameter
+- PhaseCoordinator.\_execute_hooks_with_retry() parameter
+- PhaseCoordinator.\_process_hook_results() parameter
+- PhaseCoordinator.\_handle_hook_failures() parameter
+- PhaseCoordinator.\_handle_parallel_hook_failures() parameter
+- PhaseCoordinator.\_retry_hooks_after_autofix() parameter
+- GlobalLockConfig.from_options() parameter
+- HookPluginBase.execute_hook() parameter
+- CustomHookPlugin.execute_hook() parameter
+- HookPluginRegistry.execute_custom_hook() parameter
+- PluginManager.execute_custom_hook() parameter
+- TestCommandBuilder.build_command() parameter
+- TestCommandBuilder.get_optimal_workers() parameter
+- TestCommandBuilder.get_test_timeout() parameter
+- TestCommandBuilder.\_add_coverage_options() parameter
+- TestCommandBuilder.\_add_worker_options() parameter
+- TestCommandBuilder.\_add_benchmark_options() parameter
+- TestCommandBuilder.\_add_timeout_options() parameter
+- TestCommandBuilder.\_add_verbosity_options() parameter
+- TestManagementImpl.\_get_optimal_workers() parameter
+- TestManagementImpl.\_get_test_timeout() parameter
+- TestManagementImpl.run_tests() parameter
+- TestManagementImpl.\_execute_test_workflow() parameter
+- TestManagementImpl.\_execute_tests_with_appropriate_mode() parameter
+- TestManagementImpl.\_determine_execution_mode() parameter
+- TestManagementImpl.\_build_test_command() parameter
+- TestManagementImpl.\_add_coverage_options() parameter
+- TestManagementImpl.\_add_worker_options() parameter
+- TestManagementImpl.\_add_benchmark_options() parameter
+- TestManagementImpl.\_add_timeout_options() parameter
+- TestManagementImpl.\_add_verbosity_options() parameter
+- TestManagementImpl.\_print_test_start_message() parameter
+- TestManagementImpl.get_test_command() parameter
+- TestManager.run_tests() parameter
+- TestManager.get_test_command() parameter
+- TestManager.\_execute_test_workflow() parameter
+- TestManager.\_print_test_start_message() parameter
+- TestManager.\_get_timeout() parameter
+- ConfigurationServiceProtocol.update_precommit_config() parameter
+- ConfigurationServiceProtocol.update_pyproject_config() parameter
+- TestManagerProtocol.run_tests() parameter
+- OptionsAdapter.from_options_protocol() parameter
+- OptionsAdapter.to_options_protocol() parameter
+- LegacyOptionsWrapper.__init__() parameter
+- InteractiveWorkflowManager.setup_workflow() parameter
+- InteractiveWorkflowManager.\_setup_cleaning_task() parameter
+- InteractiveWorkflowManager.\_setup_hooks_task() parameter
+- InteractiveWorkflowManager.\_setup_testing_task() parameter
+- InteractiveWorkflowManager.\_setup_publishing_task() parameter
+- InteractiveWorkflowManager.\_setup_commit_task() parameter
+- InteractiveWorkflowManager.execute_task() parameter
+- InteractiveWorkflowManager.run_workflow() parameter
+- InteractiveWorkflowManager.\_initialize_workflow() parameter
+- InteractiveWorkflowManager.\_execute_workflow_tasks() parameter
+- InteractiveCLI.launch() parameter
+- InteractiveCLI.\_get_user_preferences() parameter
+- ExecutionContext.__init__() parameter
+- AdvancedWorkflowOrchestrator.\_configure_verbose_mode() parameter
+- TestProgressStreamer.build_pytest_command() parameter
+- ConfigurationService.update_precommit_config() parameter
+- ConfigurationService.\_determine_config_mode() parameter
+- ConfigurationService.update_pyproject_config() parameter
+- OptionsConfigSource.__init__() parameter
+- UnifiedConfigurationService.__init__() parameter
+## OptionsProtocol
+**Referenced in:**
+- WorkflowPipeline.\_initialize_workflow_session() parameter
+- WorkflowPipeline.\_log_workflow_startup_debug() parameter
+- WorkflowPipeline.\_configure_session_cleanup() parameter
+- WorkflowPipeline.\_log_workflow_startup_info() parameter
+- WorkflowPipeline.\_is_publishing_workflow() parameter
+- WorkflowPipeline.\_execute_optional_cleaning_phase() parameter
+- WorkflowPipeline.\_start_iteration_tracking() parameter
+- WorkflowPipeline.\_run_initial_fast_hooks() parameter
+- WorkflowPipeline.\_finalize_ai_workflow_success() parameter
+- WorkflowPipeline.\_run_fast_hooks_phase() parameter
+- WorkflowPipeline.\_run_testing_phase() parameter
+- WorkflowPipeline.\_run_comprehensive_hooks_phase() parameter
+- WorkflowPipeline.\_run_code_cleaning_phase() parameter
+- WorkflowPipeline.\_run_post_cleaning_fast_hooks() parameter
+- WorkflowPipeline.\_execute_standard_hooks_workflow() parameter
+- WorkflowPipeline.\_initialize_ai_fixing_phase() parameter
+- WorkflowPipeline.\_prepare_ai_fixing_environment() parameter
+- WorkflowPipeline.\_check_security_gates_for_publishing() parameter
+- WorkflowPipeline.\_execute_monitored_fast_hooks_phase() parameter
+- WorkflowPipeline.\_execute_monitored_cleaning_phase() parameter
+- WorkflowPipeline.\_execute_monitored_comprehensive_phase() parameter
+- WorkflowOrchestrator.\_initialize_session_tracking() parameter
+- WorkflowOrchestrator.run_cleaning_phase() parameter
+- WorkflowOrchestrator.run_fast_hooks_only() parameter
+- WorkflowOrchestrator.run_comprehensive_hooks_only() parameter
+- WorkflowOrchestrator.run_hooks_phase() parameter
+- WorkflowOrchestrator.run_testing_phase() parameter
+- WorkflowOrchestrator.run_publishing_phase() parameter
+- WorkflowOrchestrator.run_commit_phase() parameter
+- WorkflowOrchestrator.run_configuration_phase() parameter
+- AsyncWorkflowPipeline.\_create_parallel_tasks() parameter
+- AsyncWorkflowOrchestrator.run_complete_workflow() parameter
+- AsyncWorkflowOrchestrator.run_cleaning_phase() parameter
+- AsyncWorkflowOrchestrator.run_fast_hooks_only() parameter
+- AsyncWorkflowOrchestrator.run_comprehensive_hooks_only() parameter
+- AsyncWorkflowOrchestrator.run_hooks_phase() parameter
+- AsyncWorkflowOrchestrator.run_testing_phase() parameter
+- AsyncWorkflowOrchestrator.run_publishing_phase() parameter
+- AsyncWorkflowOrchestrator.run_commit_phase() parameter
+- AsyncWorkflowOrchestrator.run_configuration_phase() parameter
+- SessionCoordinator.initialize_session_tracking() parameter
+- PhaseCoordinator.run_cleaning_phase() parameter
+- PhaseCoordinator.run_configuration_phase() parameter
+- PhaseCoordinator.\_execute_configuration_steps() parameter
+- PhaseCoordinator.\_handle_smart_config_merge() parameter
+- PhaseCoordinator.\_update_configuration_files() parameter
+- PhaseCoordinator.\_perform_smart_config_merge() parameter
+- PhaseCoordinator.run_hooks_phase() parameter
+- PhaseCoordinator.run_fast_hooks_only() parameter
+- PhaseCoordinator.run_comprehensive_hooks_only() parameter
+- PhaseCoordinator.run_testing_phase() parameter
+- PhaseCoordinator.run_publishing_phase() parameter
+- PhaseCoordinator.\_determine_version_type() parameter
+- PhaseCoordinator.\_execute_publishing_workflow() parameter
+- PhaseCoordinator.\_handle_successful_publish() parameter
+- PhaseCoordinator.run_commit_phase() parameter
+- PhaseCoordinator.execute_hooks_with_retry() parameter
+- PhaseCoordinator.\_get_commit_message() parameter
+- PhaseCoordinator.\_execute_hooks_with_retry() parameter
+- PhaseCoordinator.\_process_hook_results() parameter
+- PhaseCoordinator.\_handle_hook_failures() parameter
+- PhaseCoordinator.\_handle_parallel_hook_failures() parameter
+- PhaseCoordinator.\_retry_hooks_after_autofix() parameter
+- GlobalLockConfig.from_options() parameter
+- HookPluginBase.execute_hook() parameter
+- CustomHookPlugin.execute_hook() parameter
+- HookPluginRegistry.execute_custom_hook() parameter
+- PluginManager.execute_custom_hook() parameter
+- TestCommandBuilder.build_command() parameter
+- TestCommandBuilder.get_optimal_workers() parameter
+- TestCommandBuilder.get_test_timeout() parameter
+- TestCommandBuilder.\_add_coverage_options() parameter
+- TestCommandBuilder.\_add_worker_options() parameter
+- TestCommandBuilder.\_add_benchmark_options() parameter
+- TestCommandBuilder.\_add_timeout_options() parameter
+- TestCommandBuilder.\_add_verbosity_options() parameter
+- TestManagementImpl.\_get_optimal_workers() parameter
+- TestManagementImpl.\_get_test_timeout() parameter
+- TestManagementImpl.run_tests() parameter
+- TestManagementImpl.\_execute_test_workflow() parameter
+- TestManagementImpl.\_execute_tests_with_appropriate_mode() parameter
+- TestManagementImpl.\_determine_execution_mode() parameter
+- TestManagementImpl.\_build_test_command() parameter
+- TestManagementImpl.\_add_coverage_options() parameter
+- TestManagementImpl.\_add_worker_options() parameter
+- TestManagementImpl.\_add_benchmark_options() parameter
+- TestManagementImpl.\_add_timeout_options() parameter
+- TestManagementImpl.\_add_verbosity_options() parameter
+- TestManagementImpl.\_print_test_start_message() parameter
+- TestManagementImpl.get_test_command() parameter
+- TestManager.run_tests() parameter
+- TestManager.get_test_command() parameter
+- TestManager.\_execute_test_workflow() parameter
+- TestManager.\_print_test_start_message() parameter
+- TestManager.\_get_timeout() parameter
+- ConfigurationServiceProtocol.update_precommit_config() parameter
+- ConfigurationServiceProtocol.update_pyproject_config() parameter
+- TestManagerProtocol.run_tests() parameter
+- OptionsAdapter.from_options_protocol() parameter
+- InteractiveWorkflowManager.setup_workflow() parameter
+- InteractiveWorkflowManager.\_setup_cleaning_task() parameter
+- InteractiveWorkflowManager.\_setup_hooks_task() parameter
+- InteractiveWorkflowManager.\_setup_testing_task() parameter
+- InteractiveWorkflowManager.\_setup_publishing_task() parameter
+- InteractiveWorkflowManager.\_setup_commit_task() parameter
+- InteractiveWorkflowManager.execute_task() parameter
+- InteractiveWorkflowManager.run_workflow() parameter
+- InteractiveWorkflowManager.\_initialize_workflow() parameter
+- InteractiveWorkflowManager.\_execute_workflow_tasks() parameter
+- InteractiveCLI.launch() parameter
+- InteractiveCLI.\_get_user_preferences() parameter
+- ExecutionContext.__init__() parameter
+- AdvancedWorkflowOrchestrator.\_configure_verbose_mode() parameter
+- TestProgressStreamer.build_pytest_command() parameter
+- ConfigurationService.update_precommit_config() parameter
+- ConfigurationService.\_determine_config_mode() parameter
+- ConfigurationService.update_pyproject_config() parameter
+- OptionsConfigSource.__init__() parameter
+- UnifiedConfigurationService.__init__() parameter
+## OrchestrationConfig
+**Referenced in:**
+- StrategySelector.select_strategy() parameter
+- OrchestrationPlanner.create_execution_plan() parameter
+- OrchestrationPlanner.\_create_test_plan() parameter
+- OrchestrationPlanner.\_create_ai_plan() parameter
+- ProgressStreamer.__init__() parameter
+- AdvancedWorkflowOrchestrator.__init__() parameter
+## PackageCleaningResult
+**Referenced in:**
+- CrackerjackAPI.\_report_safe_cleaning_results() parameter
+- PhaseCoordinator.\_report_package_cleaning_results() parameter
+## PatternCache
+**Referenced in:**
+- PatternDetector.__init__() parameter
+## PerformanceCache
+**Referenced in:**
+- GitOperationCache.__init__() parameter
+- FileSystemCache.__init__() parameter
+- CommandResultCache.__init__() parameter
+## PerformanceMetric
+**Referenced in:**
+- AdaptiveLearningSystem.\_update_basic_counters() parameter
+- AdaptiveLearningSystem.\_update_execution_averages() parameter
+- AdaptiveLearningSystem.\_update_capability_success_rates() parameter
+- AdaptiveLearningSystem.\_update_performance_trend() parameter
+- AdaptiveLearningSystem.\_calculate_metrics_score() parameter
+## PhaseCoordinator
+**Referenced in:**
+- WorkflowPipeline.__init__() parameter
+- AsyncWorkflowPipeline.__init__() parameter
+## PhasePerformance
+**Referenced in:**
+- WorkflowPerformance.add_phase() parameter
+## PluginBase
+**Referenced in:**
+- HookPluginBase base class
+- HookPluginRegistry.register_hook_plugin() parameter
+- PluginLoader.\_try_instantiate_plugin_class() parameter
+- PluginRegistry.register() parameter
+## PluginLoader
+**Referenced in:**
+- PluginDiscovery.__init__() parameter
+## PluginMetadata
+**Referenced in:**
+- HookPluginBase.__init__() parameter
+- CustomHookPlugin.__init__() parameter
+- PluginLoader.\_create_hook_plugin_from_config() parameter
+- PluginBase.__init__() parameter
+## PluginRegistry
+**Referenced in:**
+- PluginLoader.__init__() parameter
+- PluginManager.__init__() parameter
+- PluginManager.__init__() parameter
+## PluginType
+**Referenced in:**
+- PluginRegistry.get_by_type() parameter
+- PluginRegistry.get_enabled() parameter
+- PluginManager.list_plugins() parameter
+## Priority
+**Referenced in:**
+- AsyncWorkflowPipeline.\_create_generic_issue() parameter
+- StateManager.get_issues_by_priority() parameter
+## ProactiveAgent
+**Referenced in:**
+- ArchitectAgent base class
+## ProjectContext
+**Referenced in:**
+- ContextualAIAssistant.\_generate_recommendations() parameter
+- ContextualAIAssistant.\_get_testing_recommendations() parameter
+- ContextualAIAssistant.\_get_code_quality_recommendations() parameter
+- ContextualAIAssistant.\_get_security_recommendations() parameter
+- ContextualAIAssistant.\_get_maintenance_recommendations() parameter
+- ContextualAIAssistant.\_get_workflow_recommendations() parameter
+- ContextualAIAssistant.\_get_documentation_recommendations() parameter
+## ProjectHealth
+**Referenced in:**
+- HealthMetricsService.\_save_health_metrics() parameter
+- HealthMetricsService.report_health_status() parameter
+- HealthMetricsService.\_print_health_metrics() parameter
+- HealthMetricsService.\_print_health_recommendations() parameter
+- HealthMetricsService.\_get_lint_errors_metrics() parameter
+- HealthMetricsService.\_get_test_coverage_metrics() parameter
+- HealthMetricsService.\_get_dependency_age_metrics() parameter
+- HealthMetricsService.\_get_trend_direction() parameter
+- HealthMetricsService.\_get_coverage_trend_direction() parameter
+## PublishManager
+**Referenced in:**
+- PhaseCoordinator.__init__() parameter
+## QualityAlert
+**Referenced in:**
+- EnhancedQualityBaselineService.generate_recommendations() parameter
+## QualityBaselineService
+**Referenced in:**
+- EnhancedQualityBaselineService base class
+## QualityMetrics
+**Referenced in:**
+- QualityBaselineService.\_identify_improvements() parameter
+- QualityBaselineService.\_identify_regressions() parameter
+## QualityReport
+**Referenced in:**
+- EnhancedQualityBaselineService.export_report() parameter
+## QualityTrend
+**Referenced in:**
+- EnhancedQualityBaselineService.generate_recommendations() parameter
+## RateLimitConfig
+**Referenced in:**
+- ResourceMonitor.__init__() parameter
+- RateLimitMiddleware.__init__() parameter
+## RegisteredAgent
+**Referenced in:**
+- AgentSelector.\_calculate_context_score() parameter
+- AgentSelector.\_score_description_matches() parameter
+- AgentSelector.\_score_keyword_matches() parameter
+- AgentSelector.\_generate_score_reasoning() parameter
+- AgentOrchestrator.\_build_consensus() parameter
+## RegressionAlert
+**Referenced in:**
+- RegressionPreventionSystem.\_log_critical_regression() parameter
+## RegressionPattern
+**Referenced in:**
+- RegressionPreventionSystem.\_check_pattern_match() parameter
+- RegressionPreventionSystem.\_check_agent_specific_failure() parameter
+- RegressionPreventionSystem.\_create_regression_alert() parameter
+- RegressionPreventionSystem.\_simulate_regression_test() parameter
+## ResourceLimits
+**Referenced in:**
+- WebSocketResourceLimiter.__init__() parameter
+## ResourceManager
+**Referenced in:**
+- ManagedWebSocketConnection.__init__() parameter
+- ManagedHTTPClient.__init__() parameter
+- ManagedWebSocketServer.__init__() parameter
+- ManagedSubprocess.__init__() parameter
+- ManagedResource.__init__() parameter
+- ManagedTemporaryFile.__init__() parameter
+- ManagedTemporaryDirectory.__init__() parameter
+- ManagedProcess.__init__() parameter
+- ManagedTask.__init__() parameter
+- ManagedFileHandle.__init__() parameter
+- AtomicFileWriter.__init__() parameter
+- LockedFileResource.__init__() parameter
+- SafeDirectoryCreator.__init__() parameter
+- BatchFileOperations.__init__() parameter
+## ResourcePool
+**Referenced in:**
+- MemoryOptimizer.register_resource_pool() parameter
+## ResourceProtocol
+**Referenced in:**
+- ResourceManager.register_resource() parameter
+## SecurityCheckResult
+**Referenced in:**
+- SecurityAuditor.\_generate_security_warnings() parameter
+- SecurityAuditor.\_generate_security_warnings() parameter
+- SecurityAuditor.\_generate_security_warnings() parameter
+- SecurityAuditor.\_generate_security_recommendations() parameter
+- SecurityAuditor.\_generate_security_recommendations() parameter
+- SecurityAuditor.\_generate_security_recommendations() parameter
+## SecurityError
+**Referenced in:**
+- CommandValidationError base class
+- EnvironmentValidationError base class
+## SecurityEvent
+**Referenced in:**
+- ValidationRateLimiter.record_failure() parameter
+- SecurityLogger.log_security_event() parameter
+- SecurityLogger.log_security_event() parameter
+- SecurityLogger.\_get_logging_level() parameter
+- SecureInputValidator.\_log_validation_failure() parameter
+## SecurityEventLevel
+**Referenced in:**
+- ValidationRateLimiter.record_failure() parameter
+- SecurityLogger.log_security_event() parameter
+- SecurityLogger.\_get_logging_level() parameter
+- SecureInputValidator.\_log_validation_failure() parameter
+## SecurityEventType
+**Referenced in:**
+- SecurityLogger.log_security_event() parameter
+## SecurityService
+**Referenced in:**
+- PublishManagerImpl.__init__() parameter
+## SecurityServiceProtocol
+**Referenced in:**
+- PublishManagerImpl.__init__() parameter
+## ServiceConfig
+**Referenced in:**
+- ServiceWatchdog.add_service() parameter
+- ServiceWatchdog.__init__() parameter
+- ServiceWatchdog.\_determine_restart_reason() parameter
+- ServiceWatchdog.\_get_service_status() parameter
+- ServiceWatchdog.\_get_service_health() parameter
+## ServiceDescriptor
+**Referenced in:**
+- DependencyResolver.create_instance() parameter
+- EnhancedDependencyContainer.\_create_service_instance() parameter
+- EnhancedDependencyContainer.\_get_or_create_singleton() parameter
+- EnhancedDependencyContainer.\_get_or_create_scoped() parameter
+- EnhancedDependencyContainer.\_create_transient_instance() parameter
+## ServiceScope
+**Referenced in:**
+- DependencyResolver.create_instance() parameter
+- EnhancedDependencyContainer.get() parameter
+- EnhancedDependencyContainer.set_current_scope() parameter
+- EnhancedDependencyContainer.\_create_service_instance() parameter
+- EnhancedDependencyContainer.\_get_or_create_scoped() parameter
+## ServiceStatus
+**Referenced in:**
+- ServiceWatchdog.\_prepare_service_startup() parameter
+- ServiceWatchdog.\_finalize_successful_startup() parameter
+- ServiceWatchdog.\_handle_service_start_failure() parameter
+## SessionCoordinator
+**Referenced in:**
+- WorkflowPipeline.__init__() parameter
+- AsyncWorkflowPipeline.__init__() parameter
+- PhaseCoordinator.__init__() parameter
+- ProgressStreamer.__init__() parameter
+- AdvancedWorkflowOrchestrator.__init__() parameter
+## StageResult
+**Referenced in:**
+- StateManager.\_update_stage_completion() parameter
+- StateManager.\_process_stage_issues() parameter
+- StateManager.\_process_stage_fixes() parameter
+## StatusSecurityError
+**Referenced in:**
+- AccessDeniedError base class
+- ResourceLimitExceededError base class
+- RateLimitExceededError base class
+## StatusSecurityManager
+**Referenced in:**
+- RequestLock.__init__() parameter
+## StatusVerbosity
+**Referenced in:**
+- SecureStatusFormatter.format_status() parameter
+- SecureStatusFormatter.\_log_status_access() parameter
+- SecureStatusFormatter.\_apply_all_sanitization_steps() parameter
+- SecureStatusFormatter.\_add_security_metadata() parameter
+- SecureStatusFormatter.\_apply_verbosity_filter() parameter
+- SecureStatusFormatter.\_sanitize_sensitive_data() parameter
+- SecureStatusFormatter.\_sanitize_recursive() parameter
+- SecureStatusFormatter.\_sanitize_string() parameter
+- SecureStatusFormatter.\_apply_string_sanitization_pipeline() parameter
+- SecureStatusFormatter.\_apply_secret_masking_if_needed() parameter
+- SecureStatusFormatter.format_error_response() parameter
+- SecureStatusFormatter.\_create_detailed_error_response() parameter
+- SecureStatusFormatter.\_should_include_error_details() parameter
+## SubAgent
+**Referenced in:**
+- AgentRegistry.\_infer_capabilities_from_agent() parameter
+- AgentCoordinator.\_is_built_in_agent() parameter
+- RefactoringAgent base class
+- ProactiveAgent base class
+- PerformanceAgent base class
+- DocumentationAgent base class
+- DRYAgent base class
+- TestSpecialistAgent base class
+- SecurityAgent base class
+- FormattingAgent base class
+- TestCreationAgent base class
+- ImportOptimizationAgent base class
+- AgentRegistry.register() parameter
+## SubprocessSecurityConfig
+**Referenced in:**
+- SecureSubprocessExecutor.__init__() parameter
+## Task
+**Referenced in:**
+- Task.__init__() parameter
+- Task.__init__() parameter
+- Task.__init__() parameter
+- Task.get_resolved_dependencies() parameter
+- WorkflowManager.load_workflow() parameter
+- WorkflowManager.set_task_executor() parameter
+- WorkflowManager.run_task() parameter
+- WorkflowManager.\_handle_task_without_executor() parameter
+- WorkflowManager.\_execute_task_with_executor() parameter
+- WorkflowManager.\_try_execute_task() parameter
+- WorkflowManager.\_display_task_result() parameter
+- WorkflowManager.\_handle_task_exception() parameter
+- WorkflowManager.\_add_status_branch() parameter
+- InteractiveCLI.\_should_run_task() parameter
+- InteractiveCLI.\_execute_single_task() parameter
+- ManagedTask.__init__() parameter
+- ResourceContext.managed_task() parameter
+- ResourceLeakDetector.track_task() parameter
+- ResourceLeakDetector.untrack_task() parameter
+- AgentSelector.\_analyze_task_capabilities() parameter
+- AgentSelector.\_analyze_text_patterns() parameter
+- AgentSelector.\_analyze_context() parameter
+- AgentSelector.\_analyze_file_patterns() parameter
+- AgentSelector.\_analyze_error_types() parameter
+- AgentSelector.\_calculate_context_score() parameter
+- AgentSelector.\_score_keyword_matches() parameter
+- AdaptiveLearningSystem.\_infer_task_capabilities() parameter
+- AdaptiveLearningSystem.\_hash_task() parameter
+- AdaptiveLearningSystem.get_agent_recommendations() parameter
+- AgentOrchestrator.\_map_task_to_issue_type() parameter
+- AgentOrchestrator.\_map_task_priority_to_severity() parameter
+- AbstractTaskResource.__init__() parameter
+- InteractiveTask.__init__() parameter
+- InteractiveWorkflowManager.execute_task() parameter
+- InteractiveWorkflowManager.\_handle_task_failure() parameter
+- IndividualHookExecutor.\_handle_process_timeout() parameter
+## TaskDefinition
+**Referenced in:**
+- Task.__init__() parameter
+- WorkflowManager.load_workflow() parameter
+## TaskDescription
+**Referenced in:**
+- AgentSelector.\_analyze_task_capabilities() parameter
+- AgentSelector.\_analyze_text_patterns() parameter
+- AgentSelector.\_analyze_context() parameter
+- AgentSelector.\_analyze_file_patterns() parameter
+- AgentSelector.\_analyze_error_types() parameter
+- AgentSelector.\_calculate_context_score() parameter
+- AgentSelector.\_score_keyword_matches() parameter
+- AdaptiveLearningSystem.\_infer_task_capabilities() parameter
+- AdaptiveLearningSystem.\_hash_task() parameter
+- AdaptiveLearningSystem.get_agent_recommendations() parameter
+- AgentOrchestrator.\_map_task_to_issue_type() parameter
+- AgentOrchestrator.\_map_task_priority_to_severity() parameter
+## TaskExecutor
+**Referenced in:**
+- Task.__init__() parameter
+- WorkflowManager.set_task_executor() parameter
+## TaskStatus
+**Referenced in:**
+- WorkflowManager.\_add_status_branch() parameter
+## TestManager
+**Referenced in:**
+- PhaseCoordinator.__init__() parameter
+## TestManagerProtocol
+**Referenced in:**
+- PhaseCoordinator.__init__() parameter
+## TestProgress
+**Referenced in:**
+- TestExecutor.\_start_reader_threads() parameter
+- TestExecutor.\_create_stdout_reader() parameter
+- TestExecutor.\_create_stderr_reader() parameter
+- TestExecutor.\_create_monitor_thread() parameter
+- TestExecutor.\_process_test_output_line() parameter
+- TestExecutor.\_parse_test_line() parameter
+- TestExecutor.\_handle_collection_completion() parameter
+- TestExecutor.\_handle_session_events() parameter
+- TestExecutor.\_handle_collection_progress() parameter
+- TestExecutor.\_handle_test_execution() parameter
+- TestExecutor.\_handle_running_test() parameter
+- TestExecutor.\_extract_current_test() parameter
+- TestExecutor.\_update_display_if_needed() parameter
+- TestExecutor.\_should_refresh_display() parameter
+- TestExecutor.\_mark_test_as_stuck() parameter
+- TestExecutor.\_handle_progress_error() parameter
+- TestExecutor.\_execute_test_process_with_progress() parameter
+- TestExecutor.\_read_stdout_with_progress() parameter
+- TestExecutor.\_emit_ai_progress() parameter
+- TestManagementImpl.\_start_reader_threads() parameter
+- TestManagementImpl.\_create_stdout_reader() parameter
+- TestManagementImpl.\_process_test_output_line() parameter
+- TestManagementImpl.\_update_display_if_needed() parameter
+- TestManagementImpl.\_get_refresh_interval() parameter
+- TestManagementImpl.\_get_current_content_signature() parameter
+- TestManagementImpl.\_create_monitor_thread() parameter
+- TestManagementImpl.\_mark_test_as_stuck() parameter
+- TestManagementImpl.\_wait_for_completion() parameter
+- TestManagementImpl.\_cleanup_threads() parameter
+- TestManagementImpl.\_parse_test_line() parameter
+- TestManagementImpl.\_handle_collection_completion() parameter
+- TestManagementImpl.\_handle_session_events() parameter
+- TestManagementImpl.\_handle_collection_progress() parameter
+- TestManagementImpl.\_handle_test_execution() parameter
+- TestManagementImpl.\_handle_running_test() parameter
+- TestManagementImpl.\_extract_current_test() parameter
+- TestManagementImpl.\_execute_test_process_with_progress() parameter
+- TestManagementImpl.\_read_stdout_with_progress() parameter
+- TestManagementImpl.\_emit_ai_progress() parameter
+- PytestOutputParser.\_process_test_result_line() parameter
+- PytestOutputParser.\_update_test_progress() parameter
+- TestProgressStreamer.set_test_callback() parameter
+- TestProgressStreamer.\_attach_failure_details() parameter
+- TestProgressStreamer.\_print_test_summary() parameter
+- TestProgressStreamer.\_print_failed_test_details() parameter
+## TestSuiteProgress
+**Referenced in:**
+- AdvancedWorkflowOrchestrator.\_update_test_suite_progress() parameter
+- PytestOutputParser.\_process_test_collection_line() parameter
+- PytestOutputParser.\_process_test_result_line() parameter
+- PytestOutputParser.\_update_suite_counts() parameter
+- PytestOutputParser.\_process_coverage_line() parameter
+- PytestOutputParser.\_process_current_test_line() parameter
+- TestProgressStreamer.set_progress_callback() parameter
+- TestProgressStreamer.\_finalize_suite_progress() parameter
+- TestProgressStreamer.\_build_success_result() parameter
+- TestProgressStreamer.\_handle_test_execution_error() parameter
+- TestProgressStreamer.\_handle_line_output() parameter
+- TestProgressStreamer.\_parse_line_for_progress() parameter
+- TestProgressStreamer.\_print_test_summary() parameter
+- TestProgressStreamer.\_print_test_counts() parameter
+- TestProgressStreamer.\_print_timing_stats() parameter
+- TestProgressStreamer.\_print_coverage_stats() parameter
+## TimeoutConfig
+**Referenced in:**
+- AsyncTimeoutManager.__init__() parameter
+## ToolResult
+**Referenced in:**
+- RustToolHookManager.create_consolidated_report() parameter
+## UsageDataCollector
+**Referenced in:**
+- RefactoringAgent.\_create_enhanced_usage_analyzer() parameter
+- EnhancedUsageAnalyzer.__init__() parameter
+## ValidationConfig
+**Referenced in:**
+- SecureInputValidator.__init__() parameter
+## WebSocketServer
+**Referenced in:**
+- WebSocketHealthMonitor.add_server() parameter
+- WebSocketHealthMonitor.remove_server() parameter
+## WorkflowBuilder
+**Referenced in:**
+- InteractiveCLI.\_add_setup_phase() parameter
+- InteractiveCLI.\_add_config_phase() parameter
+- InteractiveCLI.\_add_cleaning_phase() parameter
+- InteractiveCLI.\_add_fast_hooks_phase() parameter
+- InteractiveCLI.\_add_testing_phase() parameter
+- InteractiveCLI.\_add_comprehensive_hooks_phase() parameter
+- InteractiveCLI.\_add_version_phase() parameter
+- InteractiveCLI.\_add_publish_phase() parameter
+- InteractiveCLI.\_add_commit_phase() parameter
+- InteractiveCLI.\_add_pr_phase() parameter
+## WorkflowOptions
+**Referenced in:**
+- CrackerjackAPI.run_interactive_workflow() parameter
+- InteractiveCLI.create_dynamic_workflow() parameter
+- InteractiveCLI.run_interactive_workflow() parameter
+- OptionsAdapter.to_options_protocol() parameter
+- LegacyOptionsWrapper.__init__() parameter
+## WorkflowOrchestrator
+**Referenced in:**
+- InteractiveWorkflowManager.__init__() parameter
+## WorkflowPerformance
+**Referenced in:**
+- PerformanceMonitor.\_calculate_basic_workflow_stats() parameter
+- PerformanceMonitor.\_calculate_cache_statistics() parameter
+- PerformanceMonitor.\_calculate_parallelization_statistics() parameter
+- PerformanceMonitor.\_check_performance_warnings() parameter
+- PerformanceMonitor.\_check_duration_warning() parameter
+- PerformanceMonitor.\_check_memory_warning() parameter
+- PerformanceMonitor.\_check_cache_warning() parameter
+## all
+**Referenced in:**
+- \_DocstringFinder.__init__() parameter
+- RegexVisitor.visit_Call() parameter
+- WorkflowOrchestrator.\_register_cleanup() parameter
+- AsyncWorkflowOrchestrator.\_register_cleanup() parameter
+- ResourceManager.register_cleanup_callback() parameter
+- DependencyResolver.\_create_from_factory() parameter
+- EnhancedDependencyContainer.register_singleton() parameter
+- EnhancedDependencyContainer.register_transient() parameter
+- EnhancedDependencyContainer.register_scoped() parameter
+- SessionCoordinator.register_cleanup() parameter
+- DependencyContainer.register_transient() parameter
+- PhaseCoordinator.execute_hooks_with_retry() parameter
+- PhaseCoordinator.\_execute_hooks_with_retry() parameter
+- PhaseCoordinator.\_execute_single_hook_attempt() parameter
+- PhaseCoordinator.\_handle_parallel_hook_failures() parameter
+- PhaseCoordinator.\_retry_hooks_after_autofix() parameter
+- ParallelTaskExecutor.execute_tasks() parameter
+- PluginLoader.\_try_factory_function() parameter
+- TestExecutor.execute_with_ai_progress() parameter
+- TestExecutor.\_run_test_command_with_ai_progress() parameter
+- TestExecutor.\_execute_test_process_with_progress() parameter
+- TestExecutor.\_read_stdout_with_progress() parameter
+- TestExecutor.\_emit_ai_progress() parameter
+- TestManagementImpl.set_progress_callback() parameter
+- TestManager.set_progress_callback() parameter
+- ComplexityAnalyzer.__init__() parameter
+- BuiltinAnalyzer.visit_Call() parameter
+- EnhancedUsageAnalyzer.visit_Call() parameter
+- EnhancedUsageAnalyzer.\_process_function_call() parameter
+- AsyncProgressMonitor.subscribe() parameter
+- AsyncProgressMonitor.unsubscribe() parameter
+- PollingProgressMonitor.subscribe() parameter
+- PollingProgressMonitor.unsubscribe() parameter
+- ProgressFileHandler.__init__() parameter
+- ProgressFileHandler.__init__() parameter
+- MCPServerContext.add_startup_task() parameter
+- MCPServerContext.add_shutdown_task() parameter
+- ResourceManagerProtocol.register_cleanup_callback() parameter
+- IndividualHookExecutor.set_progress_callback() parameter
+- TestProgressStreamer.set_progress_callback() parameter
+- TestProgressStreamer.set_test_callback() parameter
+- SecureSubprocessExecutor.\_handle_process_error() parameter
+- SecurityVisitor.visit_Call() parameter
+- LazyLoader.__init__() parameter
+- ResourcePool.__init__() parameter
+- DependencyMonitorService.\_run_vulnerability_tool() parameter
+- DependencyMonitorService.\_process_vulnerability_result() parameter
+## log
+**Referenced in:**
+- ResourceManager.__init__() parameter
+- ChangelogGenerator.update_changelog() parameter
+- ChangelogGenerator.\_generate_changelog_section() parameter
+- ChangelogGenerator.\_display_changelog_preview() parameter
+- LogManager.setup_rotating_file_handler() parameter
+## read
+**Referenced in:**
+- TestExecutor.\_cleanup_threads() parameter
+- TestManagementImpl.\_cleanup_threads() parameter
+## set
+**Referenced in:**
+- CrackerjackAPI.\_should_skip_file() parameter
+- Task.can_run() parameter
+- CodeCleaner.\_should_include_file_path() parameter
+- AutofixCoordinator.\_get_hook_specific_fixes() parameter
+- AgentSelector.\_generate_score_reasoning() parameter
+- AgentSelector.\_assess_complexity() parameter
+- AgentSelector.\_generate_recommendations() parameter
+- ImportOptimizationAgent.\_check_redundant_imports() parameter
+- ImportOptimizationAgent.\_remove_old_mixed_imports() parameter
+- CrackerjackDashboard.\_remove_obsolete_panels() parameter
+- GitService.\_generate_category_messages() parameter
+- ConfigMergeService.\_get_consolidated_patterns() parameter
+- SubprocessSecurityConfig.__init__() parameter
+- SubprocessSecurityConfig.__init__() parameter
+- StatusAuthenticator.add_api_key() parameter
+- StatusSecurityManager.__init__() parameter
+- PerformanceCache.set() parameter
+- JobManager.\_create_broadcast_tasks() parameter

crackerjack 0.18.2__py3-none-any.whl → 0.45.2__py3-none-any.whl

crackerjack 0.18.2py3-none-any.whl → 0.45.2py3-none-any.whl