compiled-knowledge 4.0.0a20__cp312-cp312-win32.whl
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- ck/__init__.py +0 -0
- ck/circuit/__init__.py +17 -0
- ck/circuit/_circuit_cy.c +37523 -0
- ck/circuit/_circuit_cy.cp312-win32.pyd +0 -0
- ck/circuit/_circuit_cy.pxd +32 -0
- ck/circuit/_circuit_cy.pyx +768 -0
- ck/circuit/_circuit_py.py +836 -0
- ck/circuit/tmp_const.py +74 -0
- ck/circuit_compiler/__init__.py +2 -0
- ck/circuit_compiler/circuit_compiler.py +26 -0
- ck/circuit_compiler/cython_vm_compiler/__init__.py +1 -0
- ck/circuit_compiler/cython_vm_compiler/_compiler.c +19824 -0
- ck/circuit_compiler/cython_vm_compiler/_compiler.cp312-win32.pyd +0 -0
- ck/circuit_compiler/cython_vm_compiler/_compiler.pyx +380 -0
- ck/circuit_compiler/cython_vm_compiler/cython_vm_compiler.py +121 -0
- ck/circuit_compiler/interpret_compiler.py +223 -0
- ck/circuit_compiler/llvm_compiler.py +388 -0
- ck/circuit_compiler/llvm_vm_compiler.py +546 -0
- ck/circuit_compiler/named_circuit_compilers.py +57 -0
- ck/circuit_compiler/support/__init__.py +0 -0
- ck/circuit_compiler/support/circuit_analyser/__init__.py +13 -0
- ck/circuit_compiler/support/circuit_analyser/_circuit_analyser_cy.c +10618 -0
- ck/circuit_compiler/support/circuit_analyser/_circuit_analyser_cy.cp312-win32.pyd +0 -0
- ck/circuit_compiler/support/circuit_analyser/_circuit_analyser_cy.pyx +98 -0
- ck/circuit_compiler/support/circuit_analyser/_circuit_analyser_py.py +93 -0
- ck/circuit_compiler/support/input_vars.py +148 -0
- ck/circuit_compiler/support/llvm_ir_function.py +234 -0
- ck/example/__init__.py +53 -0
- ck/example/alarm.py +366 -0
- ck/example/asia.py +28 -0
- ck/example/binary_clique.py +32 -0
- ck/example/bow_tie.py +33 -0
- ck/example/cancer.py +37 -0
- ck/example/chain.py +38 -0
- ck/example/child.py +199 -0
- ck/example/clique.py +33 -0
- ck/example/cnf_pgm.py +39 -0
- ck/example/diamond_square.py +68 -0
- ck/example/earthquake.py +36 -0
- ck/example/empty.py +10 -0
- ck/example/hailfinder.py +539 -0
- ck/example/hepar2.py +628 -0
- ck/example/insurance.py +504 -0
- ck/example/loop.py +40 -0
- ck/example/mildew.py +38161 -0
- ck/example/munin.py +22982 -0
- ck/example/pathfinder.py +53747 -0
- ck/example/rain.py +39 -0
- ck/example/rectangle.py +161 -0
- ck/example/run.py +30 -0
- ck/example/sachs.py +129 -0
- ck/example/sprinkler.py +30 -0
- ck/example/star.py +44 -0
- ck/example/stress.py +64 -0
- ck/example/student.py +43 -0
- ck/example/survey.py +46 -0
- ck/example/triangle_square.py +54 -0
- ck/example/truss.py +49 -0
- ck/in_out/__init__.py +3 -0
- ck/in_out/parse_ace_lmap.py +216 -0
- ck/in_out/parse_ace_nnf.py +322 -0
- ck/in_out/parse_net.py +480 -0
- ck/in_out/parser_utils.py +185 -0
- ck/in_out/pgm_pickle.py +42 -0
- ck/in_out/pgm_python.py +268 -0
- ck/in_out/render_bugs.py +111 -0
- ck/in_out/render_net.py +177 -0
- ck/in_out/render_pomegranate.py +184 -0
- ck/pgm.py +3475 -0
- ck/pgm_circuit/__init__.py +1 -0
- ck/pgm_circuit/marginals_program.py +352 -0
- ck/pgm_circuit/mpe_program.py +237 -0
- ck/pgm_circuit/pgm_circuit.py +79 -0
- ck/pgm_circuit/program_with_slotmap.py +236 -0
- ck/pgm_circuit/slot_map.py +35 -0
- ck/pgm_circuit/support/__init__.py +0 -0
- ck/pgm_circuit/support/compile_circuit.py +83 -0
- ck/pgm_circuit/target_marginals_program.py +103 -0
- ck/pgm_circuit/wmc_program.py +323 -0
- ck/pgm_compiler/__init__.py +2 -0
- ck/pgm_compiler/ace/__init__.py +1 -0
- ck/pgm_compiler/ace/ace.py +299 -0
- ck/pgm_compiler/factor_elimination.py +395 -0
- ck/pgm_compiler/named_pgm_compilers.py +63 -0
- ck/pgm_compiler/pgm_compiler.py +19 -0
- ck/pgm_compiler/recursive_conditioning.py +231 -0
- ck/pgm_compiler/support/__init__.py +0 -0
- ck/pgm_compiler/support/circuit_table/__init__.py +17 -0
- ck/pgm_compiler/support/circuit_table/_circuit_table_cy.c +16396 -0
- ck/pgm_compiler/support/circuit_table/_circuit_table_cy.cp312-win32.pyd +0 -0
- ck/pgm_compiler/support/circuit_table/_circuit_table_cy.pyx +332 -0
- ck/pgm_compiler/support/circuit_table/_circuit_table_py.py +304 -0
- ck/pgm_compiler/support/clusters.py +568 -0
- ck/pgm_compiler/support/factor_tables.py +406 -0
- ck/pgm_compiler/support/join_tree.py +332 -0
- ck/pgm_compiler/support/named_compiler_maker.py +43 -0
- ck/pgm_compiler/variable_elimination.py +91 -0
- ck/probability/__init__.py +0 -0
- ck/probability/empirical_probability_space.py +50 -0
- ck/probability/pgm_probability_space.py +32 -0
- ck/probability/probability_space.py +622 -0
- ck/program/__init__.py +3 -0
- ck/program/program.py +137 -0
- ck/program/program_buffer.py +180 -0
- ck/program/raw_program.py +67 -0
- ck/sampling/__init__.py +0 -0
- ck/sampling/forward_sampler.py +211 -0
- ck/sampling/marginals_direct_sampler.py +113 -0
- ck/sampling/sampler.py +62 -0
- ck/sampling/sampler_support.py +232 -0
- ck/sampling/uniform_sampler.py +72 -0
- ck/sampling/wmc_direct_sampler.py +171 -0
- ck/sampling/wmc_gibbs_sampler.py +153 -0
- ck/sampling/wmc_metropolis_sampler.py +165 -0
- ck/sampling/wmc_rejection_sampler.py +115 -0
- ck/utils/__init__.py +0 -0
- ck/utils/iter_extras.py +163 -0
- ck/utils/local_config.py +270 -0
- ck/utils/map_list.py +128 -0
- ck/utils/map_set.py +128 -0
- ck/utils/np_extras.py +51 -0
- ck/utils/random_extras.py +64 -0
- ck/utils/tmp_dir.py +94 -0
- ck_demos/__init__.py +0 -0
- ck_demos/ace/__init__.py +0 -0
- ck_demos/ace/copy_ace_to_ck.py +15 -0
- ck_demos/ace/demo_ace.py +49 -0
- ck_demos/all_demos.py +88 -0
- ck_demos/circuit/__init__.py +0 -0
- ck_demos/circuit/demo_circuit_dump.py +22 -0
- ck_demos/circuit/demo_derivatives.py +43 -0
- ck_demos/circuit_compiler/__init__.py +0 -0
- ck_demos/circuit_compiler/compare_circuit_compilers.py +32 -0
- ck_demos/circuit_compiler/show_llvm_program.py +26 -0
- ck_demos/pgm/__init__.py +0 -0
- ck_demos/pgm/demo_pgm_dump.py +18 -0
- ck_demos/pgm/demo_pgm_dump_stress.py +18 -0
- ck_demos/pgm/demo_pgm_string_rendering.py +15 -0
- ck_demos/pgm/show_examples.py +25 -0
- ck_demos/pgm_compiler/__init__.py +0 -0
- ck_demos/pgm_compiler/compare_pgm_compilers.py +63 -0
- ck_demos/pgm_compiler/demo_compiler_dump.py +60 -0
- ck_demos/pgm_compiler/demo_factor_elimination.py +47 -0
- ck_demos/pgm_compiler/demo_join_tree.py +25 -0
- ck_demos/pgm_compiler/demo_marginals_program.py +53 -0
- ck_demos/pgm_compiler/demo_mpe_program.py +55 -0
- ck_demos/pgm_compiler/demo_pgm_compiler.py +38 -0
- ck_demos/pgm_compiler/demo_recursive_conditioning.py +33 -0
- ck_demos/pgm_compiler/demo_variable_elimination.py +33 -0
- ck_demos/pgm_compiler/demo_wmc_program.py +29 -0
- ck_demos/pgm_compiler/time_fe_compiler.py +93 -0
- ck_demos/pgm_inference/__init__.py +0 -0
- ck_demos/pgm_inference/demo_inferencing_basic.py +188 -0
- ck_demos/pgm_inference/demo_inferencing_mpe_cancer.py +45 -0
- ck_demos/pgm_inference/demo_inferencing_wmc_and_mpe_sprinkler.py +154 -0
- ck_demos/pgm_inference/demo_inferencing_wmc_student.py +110 -0
- ck_demos/programs/__init__.py +0 -0
- ck_demos/programs/demo_program_buffer.py +24 -0
- ck_demos/programs/demo_program_multi.py +24 -0
- ck_demos/programs/demo_program_none.py +19 -0
- ck_demos/programs/demo_program_single.py +23 -0
- ck_demos/programs/demo_raw_program_interpreted.py +21 -0
- ck_demos/programs/demo_raw_program_llvm.py +21 -0
- ck_demos/sampling/__init__.py +0 -0
- ck_demos/sampling/check_sampler.py +71 -0
- ck_demos/sampling/demo_marginal_direct_sampler.py +40 -0
- ck_demos/sampling/demo_uniform_sampler.py +38 -0
- ck_demos/sampling/demo_wmc_direct_sampler.py +40 -0
- ck_demos/utils/__init__.py +0 -0
- ck_demos/utils/compare.py +120 -0
- ck_demos/utils/convert_network.py +45 -0
- ck_demos/utils/sample_model.py +216 -0
- ck_demos/utils/stop_watch.py +384 -0
- compiled_knowledge-4.0.0a20.dist-info/METADATA +50 -0
- compiled_knowledge-4.0.0a20.dist-info/RECORD +178 -0
- compiled_knowledge-4.0.0a20.dist-info/WHEEL +5 -0
- compiled_knowledge-4.0.0a20.dist-info/licenses/LICENSE.txt +21 -0
- compiled_knowledge-4.0.0a20.dist-info/top_level.txt +2 -0
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"""
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For more documentation on this module, refer to the Jupyter notebook docs/6_circuits_and_programs.ipynb.
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"""
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from __future__ import annotations
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from itertools import chain
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from typing import Dict, Optional, Iterable, Sequence, List, overload
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# Type for values of ConstNode objects
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ConstValue = float | int | bool
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# A type representing a flexible representation of multiple CircuitNode objects.
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Args = CircuitNode | ConstValue | Iterable[CircuitNode | ConstValue]
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ADD: int = 0
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MUL: int = 1
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cdef int c_ADD = ADD
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cdef int c_MUL = MUL
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cdef class Circuit:
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"""
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An arithmetic circuit defines an arithmetic function from input variables (`VarNode` objects)
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and constant values (`ConstNode` objects) to one or more result values. Computation is defined
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over a mathematical ring, with two operations: addition and multiplication (represented
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by `OpNode` objects).
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An arithmetic circuit needs to be compiled to a program to execute the function.
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All nodes belong to a circuit. All nodes are immutable, with the exception that a
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`VarNode` may be temporarily be set to a constant value.
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"""
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def __init__(self, zero: ConstValue = 0, one: ConstValue = 1):
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"""
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Construct a new, empty circuit.
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Args:
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zero: The constant value for zero. mul(x, zero) = zero, add(x, zero) = x.
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one: The constant value for one. mul(x, one) = x.
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"""
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self.vars: List[VarNode] = []
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self.ops: List[OpNode] = []
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self.zero: ConstNode = ConstNode(self, zero, is_zero=True)
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self.one: ConstNode = ConstNode(self, one, is_one=True)
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self._const_map: Dict[ConstValue, ConstNode] = {zero: self.zero, one: self.one}
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self.__derivatives: Optional[_DerivativeHelper] = None # cache for partial derivatives calculations.
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@property
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def number_of_vars(self) -> int:
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"""
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Returns:
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the number of "var" nodes.
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"""
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return len(self.vars)
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@property
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def number_of_consts(self) -> int:
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"""
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Returns:
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the number of "const" nodes.
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"""
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return len(self._const_map)
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@property
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def number_of_op_nodes(self) -> int:
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"""
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Returns:
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the number of "op" nodes.
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"""
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return len(self.ops)
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@property
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def number_of_arcs(self) -> int:
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"""
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Returns:
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the number of arcs in the circuit, i.e., the sum of the
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number of arguments for all op nodes.
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"""
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return sum(len(op.args) for op in self.ops)
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@property
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def number_of_operations(self):
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"""
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How many arithmetic operations are needed to calculate the circuit.
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This is number_of_arcs - number_of_op_nodes.
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"""
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return self.number_of_arcs - self.number_of_op_nodes
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def new_var(self) -> VarNode:
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"""
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Create and return a new variable node.
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"""
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node = VarNode(self, len(self.vars))
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self.vars.append(node)
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return node
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def new_vars(self, num_of_vars: int) -> Sequence[VarNode]:
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"""
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Create and return multiple variable nodes.
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"""
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offset = self.number_of_vars
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new_vars = tuple(VarNode(self, i) for i in range(offset, offset + num_of_vars))
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self.vars.extend(new_vars)
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return new_vars
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def const(self, value: ConstValue | ConstNode) -> ConstNode:
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"""
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Return a const node for the given value.
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If a const node for that value already exists, then it will be returned,
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otherwise a new const node will be created.
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"""
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if isinstance(value, ConstNode):
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value = value.value
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node = self._const_map.get(value)
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if node is None:
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node = ConstNode(self, value)
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self._const_map[value] = node
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return node
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def add(self, *nodes: Args) -> OpNode:
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"""
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Create and return a new 'addition' node, applied to the given arguments.
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"""
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cdef list[CircuitNode] args = self._check_nodes(nodes)
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return self.op(c_ADD, tuple(args))
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def mul(self, *nodes: Args) -> OpNode:
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"""
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Create and return a new 'multiplication' node, applied to the given arguments.
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"""
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cdef list[CircuitNode] args = self._check_nodes(nodes)
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return self.op(c_MUL, tuple(args))
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def optimised_add(self, *args: Args) -> CircuitNode:
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"""
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Optimised circuit node addition.
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Performs the following optimisations:
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* addition to zero is avoided: add(x, 0) = x,
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* singleton addition is avoided: add(x) = x,
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* empty addition is avoided: add() = 0,
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"""
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cdef tuple[CircuitNode, ...] to_add = tuple(n for n in self._check_nodes(args) if not n.is_zero)
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cdef size_t num_to_add = len(to_add)
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if num_to_add == 0:
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return self.zero
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if num_to_add == 1:
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return to_add[0]
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return self.op(c_ADD, to_add)
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def optimised_mul(self, *args: Args) -> CircuitNode:
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"""
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Optimised circuit node multiplication.
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Performs the following optimisations:
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* multiplication by zero is avoided: mul(x, 0) = 0,
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* multiplication by one is avoided: mul(x, 1) = x,
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* singleton multiplication is avoided: mul(x) = x,
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* empty multiplication is avoided: mul() = 1,
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"""
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cdef tuple[CircuitNode, ...] to_mul = tuple(n for n in self._check_nodes(args) if not n.is_one)
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if any(n.is_zero for n in to_mul):
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return self.zero
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cdef Py_ssize_t num_to_mul = len(to_mul)
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if num_to_mul == 0:
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return self.one
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if num_to_mul == 1:
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return to_mul[0]
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return self.op(c_MUL, to_mul)
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|
+
def cartesian_product(self, xs: Sequence[CircuitNode], ys: Sequence[CircuitNode]) -> List[CircuitNode]:
|
|
176
|
+
"""
|
|
177
|
+
Add multiply operations, one for each possible combination of x from xs and y from ys.
|
|
178
|
+
|
|
179
|
+
Args:
|
|
180
|
+
xs: first list of circuit nodes, may be either a Node object or a list of Nodes.
|
|
181
|
+
ys: second list of circuit nodes, may be either a Node object or a list of Nodes.
|
|
182
|
+
|
|
183
|
+
Returns:
|
|
184
|
+
a list of 'mul' nodes, one for each combination of xs and ys. The results are in the order
|
|
185
|
+
given by `[mul(x, y) for x in xs for y in ys]`.
|
|
186
|
+
"""
|
|
187
|
+
cdef list[CircuitNode] xs_list = self._check_nodes(xs)
|
|
188
|
+
cdef list[CircuitNode] ys_list = self._check_nodes(ys)
|
|
189
|
+
return [
|
|
190
|
+
self.optimised_mul(x, y)
|
|
191
|
+
for x in xs_list
|
|
192
|
+
for y in ys_list
|
|
193
|
+
]
|
|
194
|
+
|
|
195
|
+
@overload
|
|
196
|
+
def partial_derivatives(
|
|
197
|
+
self,
|
|
198
|
+
f: CircuitNode,
|
|
199
|
+
args: Sequence[CircuitNode],
|
|
200
|
+
*,
|
|
201
|
+
self_multiply: bool = False,
|
|
202
|
+
) -> List[CircuitNode]:
|
|
203
|
+
...
|
|
204
|
+
|
|
205
|
+
@overload
|
|
206
|
+
def partial_derivatives(
|
|
207
|
+
self,
|
|
208
|
+
f: CircuitNode,
|
|
209
|
+
args: CircuitNode,
|
|
210
|
+
*,
|
|
211
|
+
self_multiply: bool = False,
|
|
212
|
+
) -> CircuitNode:
|
|
213
|
+
...
|
|
214
|
+
|
|
215
|
+
def partial_derivatives(
|
|
216
|
+
self,
|
|
217
|
+
f: CircuitNode,
|
|
218
|
+
args,
|
|
219
|
+
*,
|
|
220
|
+
self_multiply: bool = False,
|
|
221
|
+
):
|
|
222
|
+
"""
|
|
223
|
+
Add to the circuit the operations required to calculate the partial derivative of f
|
|
224
|
+
with respect to each of the given nodes. If self_multiple is True, then this is
|
|
225
|
+
equivalent to calculating the marginal probability at each var that represents
|
|
226
|
+
an indicator.
|
|
227
|
+
|
|
228
|
+
This method will cache partial derivative calculations for `f` so that subsequent calls
|
|
229
|
+
to this method with the same `f` will not cause duplicated calculations to be added to
|
|
230
|
+
the circuit. To release this cache, call `self.release_derivatives_cache()`.
|
|
231
|
+
|
|
232
|
+
Args:
|
|
233
|
+
f: is the circuit node that defines the function to differentiate.
|
|
234
|
+
args: nodes that are the arguments to f (typically VarNode objects).
|
|
235
|
+
The value may be either a CircuitNode object or a list of CircuitNode objects.
|
|
236
|
+
self_multiply: if true then each partial derivative df/dx will be multiplied by x.
|
|
237
|
+
|
|
238
|
+
Returns:
|
|
239
|
+
the results nodes for the partial derivatives, co-indexed with the given arg nodes.
|
|
240
|
+
If `args` is a single CircuitNode, then a single CircuitNode will be returned, otherwise
|
|
241
|
+
a list of CircuitNode is returned.
|
|
242
|
+
"""
|
|
243
|
+
cdef bint single_result = isinstance(args, CircuitNode)
|
|
244
|
+
|
|
245
|
+
cdef list[CircuitNode] args_list = self._check_nodes([args])
|
|
246
|
+
if len(args_list) == 0:
|
|
247
|
+
# Trivial case
|
|
248
|
+
return []
|
|
249
|
+
|
|
250
|
+
derivatives: _DerivativeHelper = self._derivatives(f)
|
|
251
|
+
result: List[CircuitNode]
|
|
252
|
+
if self_multiply:
|
|
253
|
+
result = [
|
|
254
|
+
derivatives.derivative_self_mul(arg)
|
|
255
|
+
for arg in args_list
|
|
256
|
+
]
|
|
257
|
+
else:
|
|
258
|
+
result = [
|
|
259
|
+
derivatives.derivative(arg)
|
|
260
|
+
for arg in args_list
|
|
261
|
+
]
|
|
262
|
+
|
|
263
|
+
if single_result:
|
|
264
|
+
return result[0]
|
|
265
|
+
else:
|
|
266
|
+
return result
|
|
267
|
+
|
|
268
|
+
def remove_derivatives_cache(self) -> None:
|
|
269
|
+
"""
|
|
270
|
+
Release the memory held for partial derivative calculations, as per `partial_derivatives`.
|
|
271
|
+
"""
|
|
272
|
+
self.__derivatives = None
|
|
273
|
+
|
|
274
|
+
def remove_unreachable_op_nodes(self, *nodes: Args) -> None:
|
|
275
|
+
"""
|
|
276
|
+
Find all op nodes reachable from the given nodes, via op arguments.
|
|
277
|
+
(using `self.reachable_op_nodes`). Remove all other op nodes from this circuit.
|
|
278
|
+
|
|
279
|
+
If any external object holds a reference to a removed node, that node will be unusable.
|
|
280
|
+
|
|
281
|
+
Args:
|
|
282
|
+
*nodes: may be either a node or a list of nodes.
|
|
283
|
+
"""
|
|
284
|
+
cdef list[CircuitNode] node_list = self._check_nodes(nodes)
|
|
285
|
+
self._remove_unreachable_op_nodes(node_list)
|
|
286
|
+
|
|
287
|
+
def reachable_op_nodes(self, *nodes: Args) -> List[OpNode]:
|
|
288
|
+
"""
|
|
289
|
+
Iterate over all op nodes reachable from the given nodes, via op arguments.
|
|
290
|
+
|
|
291
|
+
Args:
|
|
292
|
+
*nodes: may be either a node or a list of nodes.
|
|
293
|
+
|
|
294
|
+
Returns:
|
|
295
|
+
An iterator over all op nodes reachable from the given nodes.
|
|
296
|
+
|
|
297
|
+
Ensures:
|
|
298
|
+
Returned nodes are not repeated.
|
|
299
|
+
The result is ordered such that if result[i] is referenced by result[j] then i < j.
|
|
300
|
+
"""
|
|
301
|
+
cdef list[CircuitNode] node_list = self._check_nodes(nodes)
|
|
302
|
+
return self.find_reachable_op_nodes(node_list)
|
|
303
|
+
|
|
304
|
+
def dump(
|
|
305
|
+
self,
|
|
306
|
+
*,
|
|
307
|
+
prefix: str = '',
|
|
308
|
+
indent: str = ' ',
|
|
309
|
+
var_names: Optional[List[str]] = None,
|
|
310
|
+
include_consts: bool = False,
|
|
311
|
+
) -> None:
|
|
312
|
+
"""
|
|
313
|
+
Print a dump of the Circuit.
|
|
314
|
+
This is intended for debugging and demonstration purposes.
|
|
315
|
+
|
|
316
|
+
Args:
|
|
317
|
+
prefix: optional prefix for indenting all lines.
|
|
318
|
+
indent: additional prefix to use for extra indentation.
|
|
319
|
+
var_names: optional variable names to show.
|
|
320
|
+
include_consts: if true, then constant values are dumped.
|
|
321
|
+
"""
|
|
322
|
+
|
|
323
|
+
next_prefix: str = prefix + indent
|
|
324
|
+
|
|
325
|
+
node_name: Dict[int, str] = {}
|
|
326
|
+
|
|
327
|
+
print(f'{prefix}number of vars: {self.number_of_vars:,}')
|
|
328
|
+
print(f'{prefix}number of const nodes: {self.number_of_consts:,}')
|
|
329
|
+
print(f'{prefix}number of op nodes: {self.number_of_op_nodes:,}')
|
|
330
|
+
print(f'{prefix}number of operations: {self.number_of_operations:,}')
|
|
331
|
+
print(f'{prefix}number of arcs: {self.number_of_arcs:,}')
|
|
332
|
+
|
|
333
|
+
print(f'{prefix}var nodes: {self.number_of_vars}')
|
|
334
|
+
for var in self.vars:
|
|
335
|
+
node_name[id(var)] = f'var[{var.idx}]'
|
|
336
|
+
var_name: str = '' if var_names is None or var.idx >= len(var_names) else var_names[var.idx]
|
|
337
|
+
if var_name != '':
|
|
338
|
+
if var.is_const():
|
|
339
|
+
print(f'{next_prefix}var[{var.idx}]: {var_name}, {var.const.value}')
|
|
340
|
+
else:
|
|
341
|
+
print(f'{next_prefix}var[{var.idx}]: {var_name}')
|
|
342
|
+
elif var.is_const():
|
|
343
|
+
print(f'{next_prefix}var[{var.idx}]: {var.const.value}')
|
|
344
|
+
|
|
345
|
+
if include_consts:
|
|
346
|
+
print(f'{prefix}const nodes: {self.number_of_consts}')
|
|
347
|
+
for const in self._const_map.values():
|
|
348
|
+
print(f'{next_prefix}{const.value!r}')
|
|
349
|
+
|
|
350
|
+
# Add const nodes to the node_name dict
|
|
351
|
+
for const in self._const_map.values():
|
|
352
|
+
node_name[id(const)] = repr(const.value)
|
|
353
|
+
|
|
354
|
+
# Add op nodes to the node_name dict
|
|
355
|
+
for i, op in enumerate(self.ops):
|
|
356
|
+
node_name[id(op)] = f'{op.op_str()}<{i}>'
|
|
357
|
+
|
|
358
|
+
print(
|
|
359
|
+
f'{prefix}op nodes: {self.number_of_op_nodes} '
|
|
360
|
+
f'(arcs: {self.number_of_arcs}, ops: {self.number_of_operations})'
|
|
361
|
+
)
|
|
362
|
+
for op in reversed(self.ops):
|
|
363
|
+
op_name = node_name[id(op)]
|
|
364
|
+
args_str = ' '.join(node_name[id(arg)] for arg in op.args)
|
|
365
|
+
print(f'{next_prefix}{op_name}: {args_str}')
|
|
366
|
+
|
|
367
|
+
cdef OpNode op(self, int symbol, tuple[CircuitNode, ...] nodes):
|
|
368
|
+
cdef OpNode node = OpNode(self, symbol, nodes)
|
|
369
|
+
self.ops.append(node)
|
|
370
|
+
return node
|
|
371
|
+
|
|
372
|
+
cdef list[OpNode] find_reachable_op_nodes(self, list[CircuitNode] nodes):
|
|
373
|
+
# Set of object ids for all reachable op nodes
|
|
374
|
+
cdef set[int] seen = set()
|
|
375
|
+
|
|
376
|
+
cdef list[OpNode] result = []
|
|
377
|
+
|
|
378
|
+
cdef CircuitNode node
|
|
379
|
+
for node in nodes:
|
|
380
|
+
find_reachable_op_nodes_r(node, seen, result)
|
|
381
|
+
return result
|
|
382
|
+
|
|
383
|
+
cdef void _remove_unreachable_op_nodes(self, list[CircuitNode] nodes):
|
|
384
|
+
# Set of object ids for all reachable op nodes
|
|
385
|
+
cdef set[int] seen = set()
|
|
386
|
+
|
|
387
|
+
cdef CircuitNode node
|
|
388
|
+
for node in nodes:
|
|
389
|
+
find_reachable_op_nodes_seen_r(node, seen)
|
|
390
|
+
|
|
391
|
+
if len(seen) < len(self.ops):
|
|
392
|
+
# Invalidate unreadable op nodes
|
|
393
|
+
for op_node in self.ops:
|
|
394
|
+
if id(op_node) not in seen:
|
|
395
|
+
op_node.circuit = None
|
|
396
|
+
op_node.args = ()
|
|
397
|
+
|
|
398
|
+
# Keep only reachable op nodes, in the same order as `self.ops`.
|
|
399
|
+
self.ops = [op_node for op_node in self.ops if id(op_node) in seen]
|
|
400
|
+
|
|
401
|
+
cdef list[CircuitNode] _check_nodes(self, object nodes: Iterable[Args]): # -> Sequence[CircuitNode]:
|
|
402
|
+
# Convert the given circuit nodes to a list, flattening nested iterables as needed.
|
|
403
|
+
#
|
|
404
|
+
# Args:
|
|
405
|
+
# nodes: some circuit nodes of constant values.
|
|
406
|
+
#
|
|
407
|
+
# Raises:
|
|
408
|
+
# RuntimeError: if any node does not belong to this circuit.
|
|
409
|
+
cdef list[CircuitNode] result = []
|
|
410
|
+
self.__check_nodes(nodes, result)
|
|
411
|
+
return result
|
|
412
|
+
|
|
413
|
+
cdef void __check_nodes(self, object nodes: Iterable[Args], list[CircuitNode] result):
|
|
414
|
+
# Convert the given circuit nodes to a list, flattening nested iterables as needed.
|
|
415
|
+
#
|
|
416
|
+
# Args:
|
|
417
|
+
# nodes: some circuit nodes of constant values.
|
|
418
|
+
#
|
|
419
|
+
# Raises:
|
|
420
|
+
# RuntimeError: if any node does not belong to this circuit.
|
|
421
|
+
for node in nodes:
|
|
422
|
+
if isinstance(node, CircuitNode):
|
|
423
|
+
if node.circuit is not self:
|
|
424
|
+
raise RuntimeError('node does not belong to this circuit')
|
|
425
|
+
else:
|
|
426
|
+
result.append(node)
|
|
427
|
+
elif isinstance(node, ConstValue):
|
|
428
|
+
result.append(self.const(node))
|
|
429
|
+
else:
|
|
430
|
+
self.__check_nodes(node, result)
|
|
431
|
+
|
|
432
|
+
cdef object _derivatives(self, CircuitNode f):
|
|
433
|
+
# Get a _DerivativeHelper for `f`.
|
|
434
|
+
# Checking the derivative cache.
|
|
435
|
+
derivatives: Optional[_DerivativeHelper] = self.__derivatives
|
|
436
|
+
if derivatives is None or derivatives.f is not f:
|
|
437
|
+
derivatives = _DerivativeHelper(f)
|
|
438
|
+
self.__derivatives = derivatives
|
|
439
|
+
return derivatives
|
|
440
|
+
|
|
441
|
+
cdef class CircuitNode:
|
|
442
|
+
"""
|
|
443
|
+
A node in an arithmetic circuit.
|
|
444
|
+
Each node is either an op, var, or const node.
|
|
445
|
+
|
|
446
|
+
Each op node is either a mul, add or sub node. Each op
|
|
447
|
+
node has zero or more arguments. Each argument is another node.
|
|
448
|
+
|
|
449
|
+
Every var node has an index, `idx`, which is an integer counting from zero, and denotes
|
|
450
|
+
its creation order.
|
|
451
|
+
|
|
452
|
+
A var node may be temporarily set to be a constant node, which may
|
|
453
|
+
be useful for optimising a compiled circuit.
|
|
454
|
+
"""
|
|
455
|
+
|
|
456
|
+
def __init__(self, circuit: Circuit, is_zero: bool, is_one: bool):
|
|
457
|
+
self.circuit = circuit
|
|
458
|
+
self.is_zero = is_zero
|
|
459
|
+
self.is_one = is_one
|
|
460
|
+
|
|
461
|
+
def __add__(self, other: CircuitNode | ConstValue):
|
|
462
|
+
return self.circuit.add(self, other)
|
|
463
|
+
|
|
464
|
+
def __mul__(self, other: CircuitNode | ConstValue):
|
|
465
|
+
return self.circuit.mul(self, other)
|
|
466
|
+
|
|
467
|
+
cdef class ConstNode(CircuitNode):
|
|
468
|
+
"""
|
|
469
|
+
A node in a circuit representing a constant value.
|
|
470
|
+
"""
|
|
471
|
+
|
|
472
|
+
def __init__(self, circuit, value: ConstValue, is_zero: bool = False, is_one: bool = False):
|
|
473
|
+
super().__init__(circuit, is_zero, is_one)
|
|
474
|
+
self.value: ConstValue = value
|
|
475
|
+
|
|
476
|
+
def __str__(self) -> str:
|
|
477
|
+
return 'const(' + str(self.value) + ')'
|
|
478
|
+
|
|
479
|
+
def __lt__(self, other) -> bool:
|
|
480
|
+
if isinstance(other, ConstNode):
|
|
481
|
+
return self.value < other.value
|
|
482
|
+
else:
|
|
483
|
+
return False
|
|
484
|
+
|
|
485
|
+
cdef class VarNode(CircuitNode):
|
|
486
|
+
"""
|
|
487
|
+
A node in a circuit representing an input variable.
|
|
488
|
+
"""
|
|
489
|
+
|
|
490
|
+
def __init__(self, circuit, idx: int):
|
|
491
|
+
super().__init__(circuit, False, False)
|
|
492
|
+
self.idx = idx
|
|
493
|
+
self._const = None
|
|
494
|
+
|
|
495
|
+
cpdef int is_const(self) except*:
|
|
496
|
+
return self._const is not None
|
|
497
|
+
|
|
498
|
+
@property
|
|
499
|
+
def const(self) -> Optional[ConstNode]:
|
|
500
|
+
return self._const
|
|
501
|
+
|
|
502
|
+
@const.setter
|
|
503
|
+
def const(self, value: ConstValue | ConstNode | None) -> None:
|
|
504
|
+
if value is None:
|
|
505
|
+
self._const = None
|
|
506
|
+
self.is_zero = False
|
|
507
|
+
self.is_one = False
|
|
508
|
+
else:
|
|
509
|
+
const_node: ConstNode = self.circuit.const(value)
|
|
510
|
+
self._const = const_node
|
|
511
|
+
self.is_zero = const_node.is_zero
|
|
512
|
+
self.is_one = const_node.is_one
|
|
513
|
+
|
|
514
|
+
def __lt__(self, other) -> bool:
|
|
515
|
+
if isinstance(other, VarNode):
|
|
516
|
+
return self.idx < other.idx
|
|
517
|
+
else:
|
|
518
|
+
return False
|
|
519
|
+
|
|
520
|
+
def __str__(self) -> str:
|
|
521
|
+
if self._const is None:
|
|
522
|
+
return 'var[' + str(self.idx) + ']'
|
|
523
|
+
else:
|
|
524
|
+
return 'var[' + str(self.idx) + '] = ' + str(self._const.value)
|
|
525
|
+
|
|
526
|
+
cdef class OpNode(CircuitNode):
|
|
527
|
+
"""
|
|
528
|
+
A node in a circuit representing an arithmetic operation.
|
|
529
|
+
"""
|
|
530
|
+
|
|
531
|
+
def __init__(self, Circuit circuit, int symbol, tuple[CircuitNode, ...] args):
|
|
532
|
+
super().__init__(circuit, False, False)
|
|
533
|
+
self.args = tuple(args)
|
|
534
|
+
self.symbol = <int> symbol
|
|
535
|
+
|
|
536
|
+
def __str__(self) -> str:
|
|
537
|
+
return f'{self.op_str()}\\{len(self.args)}'
|
|
538
|
+
|
|
539
|
+
def op_str(self) -> str:
|
|
540
|
+
"""
|
|
541
|
+
Returns the op node operation as a string.
|
|
542
|
+
"""
|
|
543
|
+
if self.symbol == c_MUL:
|
|
544
|
+
return 'mul'
|
|
545
|
+
elif self.symbol == c_ADD:
|
|
546
|
+
return 'add'
|
|
547
|
+
else:
|
|
548
|
+
return '?' + str(self.symbol)
|
|
549
|
+
|
|
550
|
+
cdef class _DNode:
|
|
551
|
+
"""
|
|
552
|
+
A data structure supporting derivative calculations.
|
|
553
|
+
A DNode holds all information needed to calculate the partial derivative at `node`.
|
|
554
|
+
"""
|
|
555
|
+
cdef CircuitNode node
|
|
556
|
+
cdef object derivative
|
|
557
|
+
cdef object derivative_self_mul
|
|
558
|
+
cdef list[_DNodeProduct] sum_prod
|
|
559
|
+
cdef bint processed
|
|
560
|
+
|
|
561
|
+
def __init__(
|
|
562
|
+
self,
|
|
563
|
+
node: CircuitNode,
|
|
564
|
+
derivative: Optional[CircuitNode],
|
|
565
|
+
):
|
|
566
|
+
self.node = node
|
|
567
|
+
self.derivative = derivative
|
|
568
|
+
self.derivative_self_mul = None
|
|
569
|
+
self.sum_prod = []
|
|
570
|
+
self.processed = False
|
|
571
|
+
|
|
572
|
+
def __str__(self) -> str:
|
|
573
|
+
"""
|
|
574
|
+
for debugging
|
|
575
|
+
"""
|
|
576
|
+
dots: str = '...'
|
|
577
|
+
return (
|
|
578
|
+
'DNode(' + str(self.node) + ', '
|
|
579
|
+
+ str(None if self.derivative is None else dots) + ', '
|
|
580
|
+
+ str(None if self.derivative_self_mul is None else dots) + ', '
|
|
581
|
+
+ str(len(self.sum_prod)) + ', '
|
|
582
|
+
+ str(self.processed)
|
|
583
|
+
)
|
|
584
|
+
|
|
585
|
+
cdef class _DNodeProduct:
|
|
586
|
+
"""
|
|
587
|
+
A data structure supporting derivative calculations.
|
|
588
|
+
|
|
589
|
+
The represents a product of `parent` and `prod`.
|
|
590
|
+
"""
|
|
591
|
+
cdef _DNode parent
|
|
592
|
+
cdef list[CircuitNode] prod
|
|
593
|
+
|
|
594
|
+
def __init__(self, parent: _DNode, prod: List[CircuitNode]):
|
|
595
|
+
self.parent = parent
|
|
596
|
+
self.prod = prod
|
|
597
|
+
|
|
598
|
+
def __str__(self) -> str:
|
|
599
|
+
"""
|
|
600
|
+
for debugging
|
|
601
|
+
"""
|
|
602
|
+
return 'DNodeProduct(' + str(self.parent) + ', ' + str(self.prod) + ')'
|
|
603
|
+
|
|
604
|
+
|
|
605
|
+
cdef class _DerivativeHelper:
|
|
606
|
+
"""
|
|
607
|
+
A data structure to support efficient calculation of partial derivatives
|
|
608
|
+
with respect to some function node `f`.
|
|
609
|
+
"""
|
|
610
|
+
|
|
611
|
+
cdef CircuitNode f
|
|
612
|
+
cdef CircuitNode zero
|
|
613
|
+
cdef CircuitNode one
|
|
614
|
+
cdef Circuit circuit
|
|
615
|
+
cdef dict[int, _DNode] d_nodes
|
|
616
|
+
|
|
617
|
+
def __init__(self, f: CircuitNode):
|
|
618
|
+
"""
|
|
619
|
+
Prepare to calculate partial derivatives with respect to `f`.
|
|
620
|
+
"""
|
|
621
|
+
self.f = f
|
|
622
|
+
self.circuit = f.circuit
|
|
623
|
+
self.d_nodes = {} # map id(CircuitNode) to its DNode
|
|
624
|
+
self.zero = self.circuit.zero
|
|
625
|
+
self.one = self.circuit.one
|
|
626
|
+
|
|
627
|
+
cdef _DNode top_d_node = _DNode(f, self.one)
|
|
628
|
+
self.d_nodes[id(f)] = top_d_node
|
|
629
|
+
self._mk_derivative_r(top_d_node)
|
|
630
|
+
|
|
631
|
+
cdef CircuitNode derivative(self, CircuitNode node):
|
|
632
|
+
d_node: Optional[_DNode] = self.d_nodes.get(id(node))
|
|
633
|
+
if d_node is None:
|
|
634
|
+
return self.zero
|
|
635
|
+
else:
|
|
636
|
+
return self._derivative(d_node)
|
|
637
|
+
|
|
638
|
+
cdef CircuitNode derivative_self_mul(self, CircuitNode node):
|
|
639
|
+
d_node: Optional[_DNode] = self.d_nodes.get(id(node))
|
|
640
|
+
if d_node is None:
|
|
641
|
+
return self.zero
|
|
642
|
+
|
|
643
|
+
if d_node.derivative_self_mul is None:
|
|
644
|
+
d: CircuitNode = self._derivative(d_node)
|
|
645
|
+
if d is self.zero:
|
|
646
|
+
d_node.derivative_self_mul = self.zero
|
|
647
|
+
elif d is self.one:
|
|
648
|
+
d_node.derivative_self_mul = node
|
|
649
|
+
else:
|
|
650
|
+
d_node.derivative_self_mul = self.circuit.optimised_mul(d, node)
|
|
651
|
+
|
|
652
|
+
return d_node.derivative_self_mul
|
|
653
|
+
|
|
654
|
+
cdef CircuitNode _derivative(self, _DNode d_node):
|
|
655
|
+
if d_node.derivative is not None:
|
|
656
|
+
return d_node.derivative
|
|
657
|
+
|
|
658
|
+
# Get the list of circuit nodes that must be added together.
|
|
659
|
+
to_add: Sequence[CircuitNode] = tuple(
|
|
660
|
+
value
|
|
661
|
+
for value in (self._derivative_prod(prods) for prods in d_node.sum_prod)
|
|
662
|
+
if not value.is_zero
|
|
663
|
+
)
|
|
664
|
+
# we can release the temporary memory at this DNode now
|
|
665
|
+
d_node.sum_prod = None
|
|
666
|
+
|
|
667
|
+
# Construct the addition operation
|
|
668
|
+
d_node.derivative = self.circuit.optimised_add(*to_add)
|
|
669
|
+
|
|
670
|
+
return d_node.derivative
|
|
671
|
+
|
|
672
|
+
cdef CircuitNode _derivative_prod(self, _DNodeProduct prods):
|
|
673
|
+
# Support `_derivative` by constructing the derivative product for the given _DNodeProduct.
|
|
674
|
+
|
|
675
|
+
# Get the derivative of the parent node.
|
|
676
|
+
parent: CircuitNode = self._derivative(prods.parent)
|
|
677
|
+
|
|
678
|
+
# Multiply the parent derivative with all other nodes recorded at prod.
|
|
679
|
+
to_mul: List[CircuitNode] = []
|
|
680
|
+
for arg in chain((parent,), prods.prod):
|
|
681
|
+
if arg is self.zero:
|
|
682
|
+
# Multiplication by zero is zero
|
|
683
|
+
return self.zero
|
|
684
|
+
if arg is not self.one:
|
|
685
|
+
to_mul.append(arg)
|
|
686
|
+
|
|
687
|
+
# Construct the multiplication operation
|
|
688
|
+
return self.circuit.optimised_mul(*to_mul)
|
|
689
|
+
|
|
690
|
+
cdef void _mk_derivative_r(self, _DNode d_node):
|
|
691
|
+
# Construct a DNode for each argument of the given DNode.
|
|
692
|
+
|
|
693
|
+
if d_node.processed:
|
|
694
|
+
return
|
|
695
|
+
d_node.processed = True
|
|
696
|
+
node: CircuitNode = d_node.node
|
|
697
|
+
|
|
698
|
+
if isinstance(node, OpNode):
|
|
699
|
+
if node.symbol == c_ADD:
|
|
700
|
+
for arg in node.args:
|
|
701
|
+
child_d_node = self._add(arg, d_node, [])
|
|
702
|
+
self._mk_derivative_r(child_d_node)
|
|
703
|
+
elif node.symbol == c_MUL:
|
|
704
|
+
for arg in node.args:
|
|
705
|
+
prod = [arg2 for arg2 in node.args if arg is not arg2]
|
|
706
|
+
child_d_node = self._add(arg, d_node, prod)
|
|
707
|
+
self._mk_derivative_r(child_d_node)
|
|
708
|
+
|
|
709
|
+
cdef _DNode _add(self, CircuitNode node, _DNode parent, list[CircuitNode] prod):
|
|
710
|
+
# Support for `_mk_derivative_r`.
|
|
711
|
+
#
|
|
712
|
+
# Add a _DNodeProduct(parent, negate, prod) to the DNode for the given circuit node.
|
|
713
|
+
#
|
|
714
|
+
# If the DNode for `node` does not yet exist, one will be created.
|
|
715
|
+
#
|
|
716
|
+
# The given circuit node may have multiple parents (i.e., a shared sub-expression). Therefore,
|
|
717
|
+
# this method may be called multiple times for a given node. Each time a new _DNodeProduct will be added.
|
|
718
|
+
#
|
|
719
|
+
# Args:
|
|
720
|
+
# node: the CircuitNode that the returned DNode is for.
|
|
721
|
+
# parent: the DNode of the parent node, i.e., `node` is an argument to the parent node.
|
|
722
|
+
# prod: other circuit nodes that need to be multiplied with the parent derivative when
|
|
723
|
+
# constructing a derivative for `node`.
|
|
724
|
+
#
|
|
725
|
+
# Returns:
|
|
726
|
+
# the DNode for `node`.
|
|
727
|
+
|
|
728
|
+
child_d_node: _DNode = self._get(node)
|
|
729
|
+
child_d_node.sum_prod.append(_DNodeProduct(parent, prod))
|
|
730
|
+
return child_d_node
|
|
731
|
+
|
|
732
|
+
cdef _DNode _get(self, CircuitNode node):
|
|
733
|
+
# Helper for derivatives.
|
|
734
|
+
#
|
|
735
|
+
# Get the DNode for the given circuit node.
|
|
736
|
+
# If no DNode exist for it yet, then one will be constructed.
|
|
737
|
+
|
|
738
|
+
node_id: int = id(node)
|
|
739
|
+
d_node: Optional[_DNode] = self.d_nodes.get(node_id)
|
|
740
|
+
if d_node is None:
|
|
741
|
+
d_node = _DNode(node, None)
|
|
742
|
+
self.d_nodes[node_id] = d_node
|
|
743
|
+
return d_node
|
|
744
|
+
|
|
745
|
+
|
|
746
|
+
cdef void find_reachable_op_nodes_r(CircuitNode node, set[int] seen, list[OpNode] result):
|
|
747
|
+
# Recursive helper for `reachable_op_nodes`. Performs a depth-first search.
|
|
748
|
+
#
|
|
749
|
+
# Args:
|
|
750
|
+
# node: the current node being checked.
|
|
751
|
+
# seen: keep track of seen op node ids (to avoid returning multiple of the same node).
|
|
752
|
+
# result: a list where the seen nodes are added.
|
|
753
|
+
if isinstance(node, OpNode) and id(node) not in seen:
|
|
754
|
+
seen.add(id(node))
|
|
755
|
+
for arg in node.args:
|
|
756
|
+
find_reachable_op_nodes_r(arg, seen, result)
|
|
757
|
+
result.append(node)
|
|
758
|
+
|
|
759
|
+
cdef void find_reachable_op_nodes_seen_r(CircuitNode node, set[int] seen):
|
|
760
|
+
# Recursive helper for `remove_unreachable_op_nodes`. Performs a depth-first search.
|
|
761
|
+
#
|
|
762
|
+
# Args:
|
|
763
|
+
# node: the current node being checked.
|
|
764
|
+
# seen: set of seen op node ids.
|
|
765
|
+
if isinstance(node, OpNode) and id(node) not in seen:
|
|
766
|
+
seen.add(id(node))
|
|
767
|
+
for arg in node.args:
|
|
768
|
+
find_reachable_op_nodes_seen_r(arg, seen)
|