commonmeta-py 0.17.3__py3-none-any.whl → 0.20__py3-none-any.whl

commonmeta/resources/styles/vancouver.csl

@@ -1,376 +0,0 @@
-<?xml version="1.0" encoding="utf-8"?>
-<style xmlns="http://purl.org/net/xbiblio/csl" class="in-text" version="1.0" demote-non-dropping-particle="sort-only" initialize-with-hyphen="false" page-range-format="minimal">
-  <info>
-    <title>Vancouver</title>
-    <id>http://www.zotero.org/styles/vancouver</id>
-    <link href="http://www.zotero.org/styles/vancouver" rel="self"/>
-    <link href="http://www.nlm.nih.gov/bsd/uniform_requirements.html" rel="documentation"/>
-    <author>
-      <name>Michael Berkowitz</name>
-      <email>mberkowi@gmu.edu</email>
-    </author>
-    <contributor>
-      <name>Sean Takats</name>
-      <email>stakats@gmu.edu</email>
-    </contributor>
-    <contributor>
-      <name>Sebastian Karcher</name>
-    </contributor>
-    <category citation-format="numeric"/>
-    <category field="medicine"/>
-    <summary>Vancouver style as outlined by International Committee of Medical Journal Editors Uniform Requirements for Manuscripts Submitted to Biomedical Journals: Sample References</summary>
-    <updated>2022-09-28T11:33:04+00:00</updated>
-    <rights license="http://creativecommons.org/licenses/by-sa/3.0/">This work is licensed under a Creative Commons Attribution-ShareAlike 3.0 License</rights>
-  </info>
-  <locale xml:lang="en">
-    <date form="text" delimiter=" ">
-      <date-part name="year"/>
-      <date-part name="month" form="short" strip-periods="true"/>
-      <date-part name="day"/>
-    </date>
-    <terms>
-      <term name="collection-editor" form="long">
-        <single>editor</single>
-        <multiple>editors</multiple>
-      </term>
-      <term name="presented at">presented at</term>
-      <term name="available at">available from</term>
-      <term name="section" form="short">sect.</term>
-    </terms>
-  </locale>
-  <locale xml:lang="fr">
-    <date form="text" delimiter=" ">
-      <date-part name="day"/>
-      <date-part name="month" form="short" strip-periods="true"/>
-      <date-part name="year"/>
-    </date>
-  </locale>
-  <macro name="author">
-    <names variable="author">
-      <name sort-separator=" " initialize-with="" name-as-sort-order="all" delimiter=", " delimiter-precedes-last="always"/>
-      <label form="long" prefix=", "/>
-      <substitute>
-        <text macro="webpage-title"/>
-        <names variable="editor"/>
-      </substitute>
-    </names>
-  </macro>
-  <macro name="editor">
-    <names variable="editor" suffix=".">
-      <name sort-separator=" " initialize-with="" name-as-sort-order="all" delimiter=", " delimiter-precedes-last="always"/>
-      <label form="long" prefix=", "/>
-    </names>
-  </macro>
-  <macro name="chapter-marker">
-    <choose>
-      <if type="chapter paper-conference entry-dictionary entry-encyclopedia" match="any">
-        <text term="in" text-case="capitalize-first"/>
-      </if>
-    </choose>
-  </macro>
-  <macro name="webpage-title">
-    <!--If a webpage has a container, we're assuming the citation is "part of a website" as per ch. 25 Citing Medicine https://www.ncbi.nlm.nih.gov/books/NBK7274/?report=reader -->
-    <choose>
-      <if type="webpage" variable="container-title" match="all">
-        <group delimiter=" ">
-          <text variable="container-title"/>
-          <text term="internet" prefix="[" suffix="]" text-case="capitalize-first"/>
-        </group>
-      </if>
-    </choose>
-  </macro>
-  <macro name="publisher">
-    <choose>
-      <!--discard publisher info for articles-->
-      <if type="article-journal article-magazine article-newspaper" match="none">
-        <group delimiter=": " suffix=";">
-          <choose>
-            <if type="thesis">
-              <text variable="publisher-place" prefix="[" suffix="]"/>
-            </if>
-            <else-if type="speech"/>
-            <else>
-              <text variable="publisher-place"/>
-            </else>
-          </choose>
-          <text variable="publisher"/>
-        </group>
-      </if>
-    </choose>
-  </macro>
-  <macro name="access">
-    <choose>
-      <if variable="URL">
-        <group delimiter=": ">
-          <text term="available at" text-case="capitalize-first"/>
-          <text variable="URL"/>
-        </group>
-      </if>
-    </choose>
-  </macro>
-  <macro name="accessed-date">
-    <choose>
-      <if variable="URL">
-        <group prefix="[" suffix="]" delimiter=" ">
-          <text term="cited" text-case="lowercase"/>
-          <date variable="accessed" form="text"/>
-        </group>
-      </if>
-    </choose>
-  </macro>
-  <macro name="container-title">
-    <choose>
-      <if type="article-journal article-magazine chapter paper-conference article-newspaper review review-book entry-dictionary entry-encyclopedia" match="any">
-        <group suffix="." delimiter=" ">
-          <choose>
-            <if type="article-journal review review-book" match="any">
-              <text variable="container-title" form="short" strip-periods="true"/>
-            </if>
-            <else>
-              <text variable="container-title" strip-periods="true"/>
-            </else>
-          </choose>
-          <choose>
-            <if variable="URL">
-              <text term="internet" prefix="[" suffix="]" text-case="capitalize-first"/>
-            </if>
-          </choose>
-        </group>
-        <text macro="edition" prefix=" "/>
-      </if>
-      <!--add event-name and event-place once they become available-->
-      <else-if type="bill legislation" match="any">
-        <group delimiter=", ">
-          <group delimiter=". ">
-            <text variable="container-title"/>
-            <group delimiter=" ">
-              <text term="section" form="short" text-case="capitalize-first"/>
-              <text variable="section"/>
-            </group>
-          </group>
-          <text variable="number"/>
-        </group>
-      </else-if>
-      <else-if type="speech">
-        <group delimiter=": " suffix=";">
-          <group delimiter=" ">
-            <text variable="genre" text-case="capitalize-first"/>
-            <text term="presented at"/>
-          </group>
-          <text variable="event"/>
-        </group>
-      </else-if>
-      <else>
-        <group delimiter=", " suffix=".">
-          <choose>
-            <if variable="collection-title" match="none">
-              <group delimiter=" ">
-                <label variable="volume" form="short" text-case="capitalize-first"/>
-                <text variable="volume"/>
-              </group>
-            </if>
-          </choose>
-          <text variable="container-title"/>
-        </group>
-      </else>
-    </choose>
-  </macro>
-  <macro name="title">
-    <choose>
-      <if type="webpage" variable="container-title" match="all"/>
-      <else>
-        <text variable="title"/>
-        <choose>
-          <if type="article-journal article-magazine chapter paper-conference article-newspaper review review-book entry-dictionary entry-encyclopedia" match="none">
-            <choose>
-              <if variable="URL">
-                <text term="internet" prefix=" [" suffix="]" text-case="capitalize-first"/>
-              </if>
-            </choose>
-            <text macro="edition" prefix=". "/>
-          </if>
-        </choose>
-      </else>
-    </choose>
-    <choose>
-      <if type="thesis">
-        <text variable="genre" prefix=" [" suffix="]"/>
-      </if>
-    </choose>
-  </macro>
-  <macro name="edition">
-    <choose>
-      <if is-numeric="edition">
-        <group delimiter=" ">
-          <number variable="edition" form="ordinal"/>
-          <text term="edition" form="short"/>
-        </group>
-      </if>
-      <else>
-        <text variable="edition" suffix="."/>
-      </else>
-    </choose>
-  </macro>
-  <macro name="date">
-    <choose>
-      <if type="article-journal article-magazine article-newspaper review review-book" match="any">
-        <group suffix=";" delimiter=" ">
-          <date variable="issued" form="text"/>
-          <text macro="accessed-date"/>
-        </group>
-      </if>
-      <else-if type="bill legislation" match="any">
-        <group delimiter=", ">
-          <date variable="issued" delimiter=" ">
-            <date-part name="month" form="short" strip-periods="true"/>
-            <date-part name="day"/>
-          </date>
-          <date variable="issued">
-            <date-part name="year"/>
-          </date>
-        </group>
-      </else-if>
-      <else-if type="report">
-        <date variable="issued" delimiter=" ">
-          <date-part name="year"/>
-          <date-part name="month" form="short" strip-periods="true"/>
-        </date>
-        <text macro="accessed-date" prefix=" "/>
-      </else-if>
-      <else-if type="patent">
-        <group suffix=".">
-          <group delimiter=", ">
-            <text variable="number"/>
-            <date variable="issued">
-              <date-part name="year"/>
-            </date>
-          </group>
-          <text macro="accessed-date" prefix=" "/>
-        </group>
-      </else-if>
-      <else-if type="speech">
-        <group delimiter="; ">
-          <group delimiter=" ">
-            <date variable="issued" delimiter=" ">
-              <date-part name="year"/>
-              <date-part name="month" form="short" strip-periods="true"/>
-              <date-part name="day"/>
-            </date>
-            <text macro="accessed-date"/>
-          </group>
-          <text variable="event-place"/>
-        </group>
-      </else-if>
-      <else>
-        <group suffix=".">
-          <date variable="issued">
-            <date-part name="year"/>
-          </date>
-          <text macro="accessed-date" prefix=" "/>
-        </group>
-      </else>
-    </choose>
-  </macro>
-  <macro name="pages">
-    <choose>
-      <if type="article-journal article-magazine article-newspaper review review-book" match="any">
-        <text variable="page" prefix=":"/>
-      </if>
-      <else-if type="book" match="any">
-        <text variable="number-of-pages" prefix=" "/>
-        <choose>
-          <if is-numeric="number-of-pages">
-            <label variable="number-of-pages" form="short" prefix=" " plural="never"/>
-          </if>
-        </choose>
-      </else-if>
-      <else>
-        <group prefix=" " delimiter=" ">
-          <label variable="page" form="short" plural="never"/>
-          <text variable="page"/>
-        </group>
-      </else>
-    </choose>
-  </macro>
-  <macro name="journal-location">
-    <choose>
-      <if type="article-journal article-magazine review review-book" match="any">
-        <text variable="volume"/>
-        <text variable="issue" prefix="(" suffix=")"/>
-      </if>
-    </choose>
-  </macro>
-  <macro name="webpage-part">
-    <choose>
-      <if type="webpage" variable="container-title" match="all">
-        <text variable="title"/>
-      </if>
-    </choose>
-  </macro>
-  <macro name="collection-details">
-    <choose>
-      <if type="article-journal article-magazine article-newspaper review review-book" match="none">
-        <choose>
-          <if variable="collection-title">
-            <group delimiter=" " prefix="(" suffix=")">
-              <names variable="collection-editor" suffix=".">
-                <name sort-separator=" " initialize-with="" name-as-sort-order="all" delimiter=", " delimiter-precedes-last="always"/>
-                <label form="long" prefix=", "/>
-              </names>
-              <group delimiter="; ">
-                <text variable="collection-title"/>
-                <group delimiter=" ">
-                  <label variable="volume" form="short"/>
-                  <text variable="volume"/>
-                </group>
-              </group>
-            </group>
-          </if>
-        </choose>
-      </if>
-    </choose>
-  </macro>
-  <macro name="report-details">
-    <choose>
-      <if type="report">
-        <text variable="number" prefix="Report No.: "/>
-      </if>
-    </choose>
-  </macro>
-  <citation collapse="citation-number">
-    <sort>
-      <key variable="citation-number"/>
-    </sort>
-    <layout prefix="(" suffix=")" delimiter=",">
-      <text variable="citation-number"/>
-    </layout>
-  </citation>
-  <bibliography et-al-min="7" et-al-use-first="6" second-field-align="flush">
-    <layout>
-      <text variable="citation-number" suffix="."/>
-      <group delimiter=". " suffix=". ">
-        <text macro="author"/>
-        <text macro="title"/>
-      </group>
-      <group delimiter=" " suffix=". ">
-        <group delimiter=": ">
-          <text macro="chapter-marker"/>
-          <group delimiter=" ">
-            <text macro="editor"/>
-            <text macro="container-title"/>
-          </group>
-        </group>
-        <text macro="publisher"/>
-        <group>
-          <text macro="date"/>
-          <text macro="journal-location"/>
-          <text macro="pages"/>
-        </group>
-        <text macro="webpage-part"/>
-      </group>
-      <text macro="collection-details" suffix=". "/>
-      <text macro="report-details" suffix=". "/>
-      <text macro="access"/>
-    </layout>
-  </bibliography>
-</style>

commonmeta/schema_utils.py

@@ -1,27 +0,0 @@
-"""Schema utils for commonmeta-py"""
-from os import path
-import orjson as json
-from jsonschema import Draft202012Validator, ValidationError
-
-
-def json_schema_errors(instance, schema: str = "commonmeta"):
-    """validate against JSON schema"""
-    schema_map = {
-        "commonmeta": "commonmeta_v0.13",
-        "datacite": "datacite-v4.5",
-        "crossref": "crossref-v0.2",
-        "csl": "csl-data",
-        "cff": "cff_v1.2.0",
-    }
-    try:
-        if schema not in schema_map.keys():
-            raise ValueError("No schema found")
-        file_path = path.join(
-            path.dirname(__file__), f"resources/{schema_map[schema]}.json"
-        )
-        with open(file_path, encoding="utf-8") as file:
-            string = file.read()
-            schema = json.loads(string)
-        return Draft202012Validator(schema).validate(instance)
-    except ValidationError as error:
-        return error.message

commonmeta/translators.py

@@ -1,47 +0,0 @@
-"""Web translators for commonmeta. Using BeautifulSoup to extract metadata from web pages."""
-
-from furl import furl
-import re
-
-from .doi_utils import doi_as_url
-
-
-def web_translator(soup, url: str):
-    """Extract metadata from web pages"""
-    f = furl(url)
-    if f.host == "arxiv.org":
-        return arxiv_translator(soup)
-    elif f.host == "datacite.org":
-        return datacite_translator(soup)
-    elif f.host == "app.pan.pl":
-        return pan_translator(soup)
-    return {}
-
-
-def arxiv_translator(soup):
-    """Extract metadata from arXiv. Find the DOI and return it."""
-    arxiv_id = soup.select_one("meta[name='citation_arxiv_id']")
-    if arxiv_id is None:
-        return {}
-    return {"@id": f"https://doi.org/10.48550/arXiv.{arxiv_id['content']}"}
-
-
-def datacite_translator(soup):
-    """Extract metadata from DataCite blog posts. Find the DOI and return it."""
-    doi = soup.select_one("div#citation")
-    if doi is None:
-        return {}
-    return {"@id": doi.get("data-doi", None)}
-
-
-def pan_translator(soup):
-    """Extract metadata from Acta Palaeontologica Polonica. Find the DOI and return it."""
-    caption = soup.select_one("p.caption div.vol").text
-    match = re.search(
-        r"doi:(10\.4202/.+)\Z",
-        caption,
-    )
-    if match is None:
-        return {}
-    doi = doi_as_url(match.group(1))
-    return {"@id": doi}