cognite-extractor-utils 7.5.14__py3-none-any.whl → 7.7.0__py3-none-any.whl

cognite/extractorutils/uploader/upload_failure_handler.py

@@ -1,19 +1,34 @@
+"""
+This module provides a mechanism to handle file upload failures by logging details to a newline delimited JSON file.
+"""
+
 from collections.abc import Iterator
-from datetime import datetime
+from datetime import datetime, timezone
 
 import jsonlines
 
 
 class FileErrorMapping:
+    """
+    A class to represent a mapping of file name to its error reason.
+    """
+
     def __init__(self, file_name: str, error_reason: str) -> None:
         self.file_name = file_name
         self.error_reason = error_reason
 
     def __iter__(self) -> Iterator[list[str]]:
+        """
+        Returns an single-item iterator containing the file name and error reason.
+        """
         return iter([[self.file_name, self.error_reason]])
 
 
 class FileFailureManager:
+    """
+    A class to manage file upload failures by logging them to a newline delimited JSON file.
+    """
+
     MAX_QUEUE_SIZE = 500
     START_TIME_KEY = "start_time"
     FILE_REASON_MAP_KEY = "file_error_reason_map"
@@ -22,7 +37,7 @@ class FileFailureManager:
         self.failure_logs: dict[str, str] = {}
 
         self.path_to_failure_log: str = self._pre_process_file_extension(path_to_file)
-        self.start_time = start_time or str(datetime.now())
+        self.start_time = start_time or str(datetime.now(tz=timezone.utc))
         self._initialize_failure_logs()
 
     def _pre_process_file_extension(self, path_to_file: str | None) -> str:
@@ -34,13 +49,28 @@ class FileFailureManager:
         self.failure_logs = {}
 
     def __len__(self) -> int:
+        """
+        Returns the number of failure logs currently stored.
+        """
         return len(self.failure_logs)
 
     def clear(self) -> None:
+        """
+        Clears the queue of failure logs.
+        """
         self.failure_logs.clear()
         self._initialize_failure_logs()
 
     def add(self, file_name: str, error_reason: str) -> None:
+        """
+        Adds a file name and its error reason to the failure logs.
+
+        If the number of logs exceeds the maximum queue size, it writes the logs to a file.
+
+        Args:
+            file_name: The name of the file that failed to upload.
+            error_reason: The reason for the failure.
+        """
         error_file_object = FileErrorMapping(file_name=file_name, error_reason=error_reason)
         error_file_dict = dict(error_file_object)
 
@@ -50,6 +80,9 @@ class FileFailureManager:
             self.write_to_file()
 
     def write_to_file(self) -> None:
+        """
+        Flushes the current failure logs to a newline delimited JSON file and clears the queue.
+        """
         if len(self) == 0:
             return
 

cognite/extractorutils/uploader_extractor.py

@@ -1,3 +1,9 @@
+"""
+DEPRECATED. Use the normal base class and instantiate the upload queues manually.
+
+A module containing a version of the Extractor class with pre-defined upload queues.
+"""
+
 #  Copyright 2022 Cognite AS
 #
 #  Licensed under the Apache License, Version 2.0 (the "License");
@@ -12,12 +18,8 @@
 #  See the License for the specific language governing permissions and
 #  limitations under the License.
 
-"""
-A module containing a slightly more advanced base extractor class, sorting a generic output into upload queues.
-"""
-
 from collections.abc import Callable, Iterable
-from dataclasses import dataclass
+from dataclasses import dataclass, field
 from types import TracebackType
 from typing import Any, TypeVar
 
@@ -29,20 +31,33 @@ from cognite.extractorutils.configtools import BaseConfig, TimeIntervalConfig
 from cognite.extractorutils.metrics import BaseMetrics
 from cognite.extractorutils.statestore import AbstractStateStore
 from cognite.extractorutils.threading import CancellationToken
-from cognite.extractorutils.uploader import EventUploadQueue, RawUploadQueue, TimeSeriesUploadQueue
-from cognite.extractorutils.uploader_types import CdfTypes, Event, InsertDatapoints, RawRow
+from cognite.extractorutils.uploader import (
+    CDMTimeSeriesUploadQueue,
+    EventUploadQueue,
+    RawUploadQueue,
+    TimeSeriesUploadQueue,
+)
+from cognite.extractorutils.uploader_types import CdfTypes, Event, InsertCDMDatapoints, InsertDatapoints, RawRow
 
 
 @dataclass
 class QueueConfigClass:
+    """
+    Configuration for several upload queues.
+    """
+
     event_size: int = 10_000
     raw_size: int = 50_000
     timeseries_size: int = 1_000_000
-    upload_interval: TimeIntervalConfig = TimeIntervalConfig("1m")
+    upload_interval: TimeIntervalConfig = field(default_factory=lambda: TimeIntervalConfig("1m"))
 
 
 @dataclass
 class UploaderExtractorConfig(BaseConfig):
+    """
+    Base configuration for the UploaderExtractor.
+    """
+
     queues: QueueConfigClass | None
 
 
@@ -108,6 +123,13 @@ class UploaderExtractor(Extractor[UploaderExtractorConfigClass]):
         self.middleware = middleware if isinstance(middleware, list) else []
 
     def handle_output(self, output: CdfTypes) -> None:
+        """
+        Handle the output of the extractor and sort it into appropriate upload queues.
+
+        Args:
+            output: The output from the extractor, which can be an Event, RawRow, InsertDatapoints, or an iterable of
+                these types.
+        """
         list_output = [output] if not isinstance(output, Iterable) else output
         peekable_output = peekable(list_output)
 
@@ -136,6 +158,10 @@ class UploaderExtractor(Extractor[UploaderExtractorConfigClass]):
                     self.time_series_queue.add_to_upload_queue(
                         id=dp.id, external_id=dp.external_id, datapoints=dp.datapoints
                     )
+        elif isinstance(peek, InsertCDMDatapoints):
+            for dp in peekable_output:
+                if isinstance(dp, InsertCDMDatapoints):
+                    self.cdm_time_series_queue.add_to_upload_queue(instance_id=dp.instance_id, datapoints=dp.datapoints)
         else:
             raise ValueError(f"Unexpected type: {type(peek)}")
 
@@ -145,6 +171,9 @@ class UploaderExtractor(Extractor[UploaderExtractorConfigClass]):
         return item
 
     def __enter__(self) -> "UploaderExtractor":
+        """
+        Initializes the upload queues and returns the extractor instance.
+        """
         super().__enter__()
 
         queue_config = self.config.queues if self.config.queues else QueueConfigClass()
@@ -167,13 +196,22 @@ class UploaderExtractor(Extractor[UploaderExtractorConfigClass]):
             trigger_log_level="INFO",
             create_missing=True,
         ).__enter__()
-
+        self.cdm_time_series_queue = CDMTimeSeriesUploadQueue(
+            self.cognite_client,
+            max_queue_size=queue_config.timeseries_size,
+            max_upload_interval=queue_config.upload_interval.seconds,
+            trigger_log_level="INFO",
+        ).__enter__()
         return self
 
     def __exit__(
         self, exc_type: type[BaseException] | None, exc_val: BaseException | None, exc_tb: TracebackType | None
     ) -> bool:
+        """
+        Waits for the upload queues and exits the extractor context.
+        """
         self.event_queue.__exit__(exc_type, exc_val, exc_tb)
         self.raw_queue.__exit__(exc_type, exc_val, exc_tb)
         self.time_series_queue.__exit__(exc_type, exc_val, exc_tb)
+        self.cdm_time_series_queue.__exit__(exc_type, exc_val, exc_tb)
         return super().__exit__(exc_type, exc_val, exc_tb)

cognite/extractorutils/uploader_types.py

@@ -1,19 +1,44 @@
+"""
+DEPRECATED: This module is deprecated and will be removed in a future release.
+
+These types are used in the UploaderExtractor, as well as the REST and MQTT extensions for the extractorutils library.
+"""
+
 from collections.abc import Iterable
 from typing import TypeAlias
 
 from cognite.client.data_classes import Event as _Event
 from cognite.client.data_classes import Row as _Row
+from cognite.client.data_classes.data_modeling import NodeId
 from cognite.extractorutils.uploader.time_series import DataPoint
 
 
 class InsertDatapoints:
-    def __init__(self, *, id: int | None = None, external_id: str | None = None, datapoints: list[DataPoint]):
+    """
+    A class representing a batch of datapoints to be inserted into a time series.
+    """
+
+    def __init__(self, *, id: int | None = None, external_id: str | None = None, datapoints: list[DataPoint]):  # noqa: A002
         self.id = id
         self.external_id = external_id
         self.datapoints = datapoints
 
 
+class InsertCDMDatapoints:
+    """
+    A class representing a batch of datapoints to be inserted into a cdm time series.
+    """
+
+    def __init__(self, *, instance_id: NodeId, datapoints: list[DataPoint]):
+        self.instance_id = instance_id
+        self.datapoints = datapoints
+
+
 class RawRow:
+    """
+    A class representing a row of data to be inserted into a RAW table.
+    """
+
     def __init__(self, db_name: str, table_name: str, row: _Row | Iterable[_Row]):
         self.db_name = db_name
         self.table_name = table_name

cognite/extractorutils/util.py

@@ -13,8 +13,7 @@
 #  limitations under the License.
 
 """
-The ``util`` package contains miscellaneous functions and classes that can some times be useful while developing
-extractors.
+This module contains miscellaneous functions and classes.
 """
 
 import io
@@ -79,8 +78,9 @@ def ensure_assets(cdf_client: CogniteClient, assets: Iterable[Asset]) -> None:
 
 class EitherId:
     """
-    Class representing an ID in CDF, which can either be an external or internal ID. An EitherId can only hold one ID
-    type, not both.
+    Class representing an ID in CDF, which can either be an external or internal ID.
+
+    An EitherId can only hold one ID type, not both.
 
     Args:
         id: Internal ID
@@ -111,7 +111,7 @@ class EitherId:
 
     def type(self) -> str:
         """
-        Get the type of the ID
+        Get the type of the ID.
 
         Returns:
             'id' if the EitherId represents an internal ID, 'externalId' if the EitherId represents an external ID
@@ -120,7 +120,7 @@ class EitherId:
 
     def content(self) -> int | str:
         """
-        Get the value of the ID
+        Get the value of the ID.
 
         Returns:
             The ID
@@ -129,7 +129,7 @@ class EitherId:
 
     def __eq__(self, other: Any) -> bool:
         """
-        Compare with another object. Only returns true if other is an EitherId with the same type and content
+        Compare with another object. Only returns true if other is an EitherId with the same type and content.
 
         Args:
             other: Another object
@@ -144,7 +144,7 @@ class EitherId:
 
     def __hash__(self) -> int:
         """
-        Returns a hash of the internal or external ID
+        Returns a hash of the internal or external ID.
 
         Returns:
             Hash code of ID
@@ -186,6 +186,7 @@ def add_extraction_pipeline(
         extraction_pipeline_ext_id: External ID of the extraction pipeline
         cognite_client: Client to use when communicating with CDF
         heartbeat_waiting_time: Target interval between heartbeats, in seconds
+        added_message: Message to add to the extraction pipeline run status message.
 
     Usage:
         If you have a function named "extract_data(*args, **kwargs)" and want to connect it to an extraction
@@ -200,7 +201,6 @@ def add_extraction_pipeline(
             def extract_data(*args, **kwargs):
                 <INSERT FUNCTION BODY>
     """
-
     # TODO 1. Consider refactoring this decorator to share methods with the Extractor context manager in .base.py
     # as they serve a similar purpose
 
@@ -226,10 +226,10 @@ def add_extraction_pipeline(
 
             def _report_error(exception: Exception) -> None:
                 """
-                Called on an unsuccessful exit of the extractor
+                Called on an unsuccessful exit of the extractor.
                 """
                 message = (
-                    f"Exception for function '{input_function.__name__}'. {added_message}:\n" f"{str(exception)[:1000]}"
+                    f"Exception for function '{input_function.__name__}'. {added_message}:\n{str(exception)[:1000]}"
                 )
                 cognite_client.extraction_pipelines.runs.create(
                     ExtractionPipelineRun(
@@ -276,8 +276,9 @@ def add_extraction_pipeline(
 
 def throttled_loop(target_time: int, cancellation_token: CancellationToken) -> Generator[None, None, None]:
     """
-    A loop generator that automatically sleeps until each iteration has taken the desired amount of time. Useful for
-    when you want to avoid overloading a source system with requests.
+    A loop generator that automatically sleeps until each iteration has taken the desired amount of time.
+
+    Useful for when you want to avoid overloading a source system with requests.
 
     Example:
         This example will throttle printing to only print every 10th second:
@@ -418,8 +419,9 @@ def requests_exceptions(
     status_codes: list[int] | None = None,
 ) -> dict[type[Exception], Callable[[Any], bool]]:
     """
-    Retry exceptions from using the ``requests`` library. This will retry all connection and HTTP errors matching
-    the given status codes.
+    Retry exceptions from using the ``requests`` library.
+
+    This will retry all connection and HTTP errors matching the given status codes.
 
     Example:
 
@@ -452,8 +454,9 @@ def httpx_exceptions(
     status_codes: list[int] | None = None,
 ) -> dict[type[Exception], Callable[[Any], bool]]:
     """
-    Retry exceptions from using the ``httpx`` library. This will retry all connection and HTTP errors matching
-    the given status codes.
+    Retry exceptions from using the ``httpx`` library.
+
+    This will retry all connection and HTTP errors matching the given status codes.
 
     Example:
 
@@ -486,8 +489,9 @@ def cognite_exceptions(
     status_codes: list[int] | None = None,
 ) -> dict[type[Exception], Callable[[Any], bool]]:
     """
-    Retry exceptions from using the Cognite SDK. This will retry all connection and HTTP errors matching
-    the given status codes.
+    Retry exceptions from using the Cognite SDK.
+
+    This will retry all connection and HTTP errors matching the given status codes.
 
     Example:
 
@@ -508,22 +512,42 @@ def cognite_exceptions(
 
 
 def datetime_to_timestamp(dt: datetime) -> int:
+    """
+    Convert a datetime object to a timestamp in milliseconds since 1970-01-01 00:00:00 UTC.
+
+    Args:
+        dt: The datetime object to convert. It should be timezone-aware.
+
+    Returns:
+        The timestamp in milliseconds.
+    """
     return int(dt.timestamp() * 1000)
 
 
 def timestamp_to_datetime(ts: int) -> datetime:
+    """
+    Convert a timestamp in milliseconds since 1970-01-01 00:00:00 UTC to a datetime object.
+
+    Args:
+        ts: The timestamp in milliseconds.
+
+    Returns:
+        A datetime object representing the timestamp in UTC.
+    """
     return datetime.fromtimestamp(ts / 1000, tz=timezone.utc)
 
 
 def now() -> int:
     """
-    Current time in CDF format (milliseonds since 1970-01-01 00:00:00 UTC)
+    Current time in CDF format (milliseconds since 1970-01-01 00:00:00 UTC).
     """
     return int(time() * 1000)
 
 
 def truncate_byte_len(item: str, ln: int) -> str:
-    """Safely truncate an arbitrary utf-8 string.
+    """
+    Safely truncate an arbitrary utf-8 string.
+
     Used to sanitize metadata.
 
     Args:
@@ -533,7 +557,6 @@ def truncate_byte_len(item: str, ln: int) -> str:
     Returns:
         str: truncated string
     """
-
     bts = item.encode("utf-8")
     if len(bts) <= ln:
         return item
@@ -570,7 +593,21 @@ def truncate_byte_len(item: str, ln: int) -> str:
 
 
 class BufferedReadWithLength(io.BufferedReader):
-    def __init__(self, raw: RawIOBase, buffer_size: int, len: int, on_close: Callable[[], None] | None = None) -> None:
+    """
+    A BufferedReader that also has a length attribute.
+
+    Some libraries (like requests) checks streams for a ``len`` attribute to use for the content-length header when
+    uploading files. Using this class allows these libraries to work with streams that have a known length without
+    seeking to the end of the stream to find its length.
+
+    Args:
+        raw: The raw IO object to read from.
+        buffer_size: The size of the buffer to use.
+        len: The length of the stream in bytes.
+        on_close: A callable that will be called when the stream is closed. This can be used to clean up resources.
+    """
+
+    def __init__(self, raw: RawIOBase, buffer_size: int, len: int, on_close: Callable[[], None] | None = None) -> None:  # noqa: A002
         super().__init__(raw, buffer_size)
         # Do not remove even if it appears to be unused. :P
         # Requests uses this to add the content-length header, which is necessary for writing to files in azure clusters
@@ -578,6 +615,9 @@ class BufferedReadWithLength(io.BufferedReader):
         self.on_close = on_close
 
     def close(self) -> None:
+        """
+        Close the stream and call the on_close callback if it is set.
+        """
         if self.on_close:
             self.on_close()
         return super().close()
@@ -589,6 +629,19 @@ def iterable_to_stream(
     buffer_size: int = io.DEFAULT_BUFFER_SIZE,
     on_close: Callable[[], None] | None = None,
 ) -> BufferedReadWithLength:
+    """
+    Convert an iterable of bytes into a stream that can be read from.
+
+    Args:
+        iterator: An iterable that yields bytes. This can be a generator or any other iterable.
+        file_size_bytes: The total size of the file in bytes. This is used to set the length of the stream.
+        buffer_size: The size of the buffer to use when reading from the stream.
+        on_close: A callable that will be called when the stream is closed. This can be used to clean up resources.
+
+    Returns:
+        A BufferedReader that can be read from, with a known length.
+    """
+
     class ChunkIteratorStream(io.RawIOBase):
         def __init__(self) -> None:
             self.last_chunk = None

{cognite_extractor_utils-7.5.14.dist-info → cognite_extractor_utils-7.7.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: cognite-extractor-utils
-Version: 7.5.14
+Version: 7.7.0
 Summary: Utilities for easier development of extractors for CDF
 Project-URL: repository, https://github.com/cognitedata/python-extractor-utils
 Author-email: Mathias Lohne <mathias.lohne@cognite.com>

cognite_extractor_utils-7.7.0.dist-info/RECORD

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