codex 1.6.19__py3-none-any.whl → 1.7.0__py3-none-any.whl
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- codex/choices.py +419 -0
- codex/choices_to_json.py +122 -0
- codex/db.py +134 -0
- codex/exceptions.py +2 -3
- codex/librarian/bookmark/__init__.py +1 -0
- codex/librarian/bookmark/bookmarkd.py +38 -0
- codex/librarian/bookmark/tasks.py +19 -0
- codex/librarian/bookmark/update.py +154 -0
- codex/librarian/covers/coverd.py +3 -4
- codex/librarian/covers/create.py +8 -7
- codex/librarian/covers/path.py +1 -2
- codex/librarian/covers/purge.py +3 -3
- codex/librarian/importer/const.py +7 -1
- codex/librarian/importer/create_fks.py +5 -2
- codex/librarian/importer/importerd.py +17 -12
- codex/librarian/importer/moved.py +44 -13
- codex/librarian/importer/tasks.py +2 -0
- codex/librarian/janitor/cleanup.py +21 -8
- codex/librarian/janitor/integrity.py +371 -0
- codex/librarian/janitor/janitor.py +50 -15
- codex/librarian/janitor/latest_version.py +2 -1
- codex/librarian/janitor/status.py +5 -0
- codex/librarian/janitor/tasks.py +37 -0
- codex/librarian/janitor/update.py +1 -1
- codex/librarian/librariand.py +37 -24
- codex/librarian/search/optimize.py +43 -0
- codex/librarian/search/remove.py +18 -46
- codex/librarian/search/searchd.py +14 -17
- codex/librarian/search/status.py +2 -1
- codex/librarian/search/tasks.py +4 -9
- codex/librarian/search/update.py +223 -301
- codex/librarian/watchdog/emitter.py +21 -19
- codex/librarian/watchdog/event_batcherd.py +0 -1
- codex/librarian/watchdog/observers.py +2 -1
- codex/migrations/0029_comicfts.py +58 -0
- codex/migrations/0030_nocase_collation_day_month_indexes_status_types.py +202 -0
- codex/models/admin.py +15 -11
- codex/models/base.py +9 -0
- codex/models/bookmark.py +3 -3
- codex/models/comic.py +68 -16
- codex/models/functions.py +60 -2
- codex/models/groups.py +6 -1
- codex/models/library.py +1 -3
- codex/models/paths.py +9 -3
- codex/models/query.py +6 -0
- codex/run.py +11 -9
- codex/serializers/admin/tasks.py +2 -2
- codex/serializers/browser/mixins.py +18 -14
- codex/serializers/browser/page.py +2 -0
- codex/serializers/browser/settings.py +4 -4
- codex/serializers/fields.py +9 -5
- codex/settings/settings.py +16 -17
- codex/signals/django_signals.py +4 -10
- codex/startup.py +7 -39
- codex/static_root/assets/VCheckbox-D_CWEmqR.84f2b49311e8.js +1 -0
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- codex/static_root/assets/VSlideGroup-BtXPhMOT.830f136ffd41.css +1 -0
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- codex/static_root/assets/admin-CD90VMen.4c2b6f2a5111.js +1 -0
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- codex/static_root/assets/{admin-CWEjaFr5.7d4523387384.css → admin-DJ7pIXDQ.css} +1 -1
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- codex/static_root/manifest.0fe31a6cb99f.json.gz +0 -0
- codex/templates/search/indexes/codex/comic_text.txt +0 -47
- codex/views/browser/annotations.py +0 -296
- codex/views/browser/base.py +0 -140
- codex/views/browser/filters/annotations.py +0 -103
- codex/views/browser/filters/search.py +0 -196
- codex/views/browser/metadata.py +0 -332
- {codex-1.6.19.dist-info → codex-1.7.0.dist-info}/LICENSE +0 -0
- {codex-1.6.19.dist-info → codex-1.7.0.dist-info}/WHEEL +0 -0
- {codex-1.6.19.dist-info → codex-1.7.0.dist-info}/entry_points.txt +0 -0
codex/integrity.py
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"""Repair Database Integrity Errors."""
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import re
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import sqlite3
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from types import MappingProxyType
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from django.apps import apps
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from django.contrib.auth import get_user_model
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from django.contrib.auth.models import Group
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from django.contrib.sessions.models import Session
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from django.db import DEFAULT_DB_ALIAS, connection, connections
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from django.db.migrations.executor import MigrationExecutor
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from django.db.migrations.recorder import MigrationRecorder
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from django.db.models.functions import Now
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from django.db.models.query import Q
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from django.db.utils import OperationalError
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from codex.logger.logging import get_logger
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from codex.settings.settings import (
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CODEX_PATH,
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CONFIG_PATH,
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CUSTOM_COVERS_DIR,
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DB_PATH,
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SKIP_INTEGRITY_CHECK,
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)
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NO_MIGRATIONS_TABLE_ERROR = "no such table: django_migrations"
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REPAIR_FLAG_PATH = CONFIG_PATH / "rebuild_db"
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DUMP_LINE_MATCHER = re.compile("TRANSACTION|ROLLBACK|COMMIT")
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REBUILT_DB_PATH = DB_PATH.parent / (DB_PATH.name + ".rebuilt")
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BACKUP_DB_PATH = DB_PATH.parent / (DB_PATH.name + ".bak")
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MIGRATION_0005 = "0005_auto_20200918_0146"
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MIGRATION_0007 = "0007_auto_20211210_1710"
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MIGRATION_0010 = "0010_haystack"
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MIGRATION_0011 = "0010_library_groups_and_metadata_changes"
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MIGRATION_0018 = "0018_rename_userbookmark_bookmark"
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MIGRATION_0025 = "0025_add_story_arc_number"
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MIGRATION_0026 = "0026_comicbox_1"
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MIGRATION_0027 = "0027_import_order_and_covers"
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M2M_NAMES = MappingProxyType(
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{
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"Character": "characters",
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"Contributor": "contributors",
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"Genre": "genres",
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"Location": "locations",
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"SeriesGroup": "series_groups",
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"StoryArcNumber": "story_arc_numbers",
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"Tag": "tags",
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"Team": "teams",
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"Folder": "folders",
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}
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)
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SKIP_M2M_CHECKS = MappingProxyType(
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{"Contributor": MIGRATION_0026, "StoryArcNumber": MIGRATION_0025}
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)
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NULL_SET = frozenset({None})
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HAVE_LIBRARY_FKS = ("FailedImport", "Folder", "Comic", "CustomCover")
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GROUP_HOSTS = MappingProxyType(
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{
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"Imprint": ("Publisher",),
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"Series": ("Publisher", "Imprint"),
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"Volume": ("Publisher", "Imprint", "Series"),
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"Comic": ("Publisher", "Imprint", "Series", "Volume"),
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}
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)
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COMIC_FK_FIELDS = MappingProxyType(
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{
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"AgeRating": "age_rating",
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"Country": "country",
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"Language": "language",
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"OriginalFormat": "original_format",
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"ScanInfo": "scan_info",
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"Tagger": "tagger",
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}
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)
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WATCHED_PATHS = ("Comic", "Folder")
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CONTRIBUTOR_FIELDS = MappingProxyType(
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{"ContributorRole": "role", "ContributorPerson": "person"}
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)
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OPERATIONAL_ERRORS_BEFORE_MIGRATIONS = (
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"no such column: codex_comic.name",
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"no such column: codex_comic.stat",
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"no such column: codex_folder.stat",
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"no such table: codex_comic_folders",
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# "no such table: codex_comic_contributors",
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"'QuerySet' object has no attribute 'stat'",
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)
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DELETE_BAD_COMIC_FOLDER_RELATIONS_SQL = (
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'DELETE FROM "codex_comic_folder" '
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'WHERE (NOT ("codex_comic_folder"."comic_id" '
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'IN (SELECT "codex_comic"."id" FROM "codex_comic")) '
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'OR NOT ("codex_comic_folder"."folder_id" '
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'IN (SELECT "codex_folder"."id" FROM "codex_folder")))'
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)
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MIGRATION_DIR = CODEX_PATH / "migrations"
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CUSTOM_COVER_MODEL_NAMES = MappingProxyType(
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{"publisher": "p", "imprint": "i", "series": "s", "storyarc": "a", "folder": "f"}
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)
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LOG = get_logger(__name__)
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def has_applied_migration(migration_name):
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"""Check if a specific migration has been applied."""
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return MigrationRecorder.Migration.objects.filter(
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app="codex", name=migration_name
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).exists()
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def has_unapplied_migrations():
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"""Check if any migrations are outstanding."""
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try:
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connection = connections[DEFAULT_DB_ALIAS]
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connection.prepare_database()
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executor = MigrationExecutor(connection)
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targets = [
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key for key in executor.loader.graph.leaf_nodes() if key[0] == "codex"
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]
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plan = executor.migration_plan(targets)
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except Exception as exc:
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LOG.warning(f"has_unapplied_migrations(): {exc}")
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return False
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else:
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return bool(plan)
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def _delete_old_comic_folder_fks():
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if has_applied_migration(MIGRATION_0007):
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return
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try:
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with connection.cursor() as cursor:
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cursor.execute(DELETE_BAD_COMIC_FOLDER_RELATIONS_SQL)
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LOG.info("Deleted old comic_folder relations with bad integrity.")
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except Exception:
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LOG.exception("Deleting old comic folders")
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def _fix_comic_m2m_integrity_errors(apps, comic_model, m2m_model_name, field_name):
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"""Fix Comic ManyToMany integrity errors."""
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"""Delete relations to comics that don't exist and m2ms that don't exist."""
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m2m_model = apps.get_model("codex", m2m_model_name)
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field = getattr(comic_model, field_name)
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through_model = field.through
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link_col = field_name[:-1].replace("_", "") + "_id"
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m2m_rels_with_bad_comic_ids = through_model.objects.exclude(
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comic_id__in=comic_model.objects.all()
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)
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count_comic, _ = m2m_rels_with_bad_comic_ids.delete()
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m2m_rels_with_bad_m2m_ids = through_model.objects.exclude(
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**{f"{link_col}__in": m2m_model.objects.all()}
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)
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bad_comic_ids = comic_model.objects.filter(
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pk__in=m2m_rels_with_bad_m2m_ids.values_list("comic_id", flat=True)
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).values_list("pk", flat=True)
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count_m2m, _ = m2m_rels_with_bad_m2m_ids.delete()
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count = count_comic + count_m2m
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if count:
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LOG.info(f"Deleted {count} orphan relations to {field_name}")
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return frozenset(bad_comic_ids)
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def _fix_comic_fk_integrity_errors(apps, comic_model, fk_model_name, field_name):
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fk_model = apps.get_model("codex", fk_model_name)
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bad_pks = _null_missing_fk(comic_model, fk_model, field_name)
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getattr(comic_model, field_name)
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count = len(bad_pks)
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if count:
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LOG.info(f"Deleted {count} {field_name} links to missing rows.")
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return frozenset(bad_pks)
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def _mark_comics_with_bad_rels_for_update(comic_model, bad_comic_ids):
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"""Mark affected comics for update."""
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try:
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update_comics = []
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bad_comics = comic_model.objects.filter(pk__in=bad_comic_ids).only("stat")
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for comic in bad_comics:
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stat_list = comic.stat
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if not stat_list:
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continue
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stat_list[8] = 0.0
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comic.stat = stat_list
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update_comics.append(comic)
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if not update_comics:
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return
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count = comic_model.objects.bulk_update(update_comics, fields=["stat"])
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LOG.info(f"Marked {count} comics with bad relations for update by poller.")
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except (OperationalError, AttributeError) as exc:
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ok = False
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for arg in exc.args:
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if arg in OPERATIONAL_ERRORS_BEFORE_MIGRATIONS:
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LOG.debug(
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"Can't mark modified comics for update, "
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"but if this happens right before migration 0007, "
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"they'll be updated anyway."
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)
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ok = True
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if not ok:
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LOG.exception("Mark comics with bad relations for update.")
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def _find_fk_integrity_errors_with_models(
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host_model, fk_model, fk_field_name, log=True
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):
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"""Find foreign key integrity errors with specified models."""
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inner_qs = fk_model.objects.all()
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exclude_filter = {f"{fk_field_name}__in": inner_qs}
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invalid_host_objs = host_model.objects.exclude(**exclude_filter).only(fk_field_name)
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if fk_field_name in ("parent_folder", "role"):
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# Special fields can be null
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# THIS IS VERY IMPORTANT TO AVOID DELETING ALL TOP LEVEL FOLDERS
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not_null_filter = {f"{fk_field_name}__isnull": False}
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invalid_host_objs = invalid_host_objs.filter(**not_null_filter)
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count = invalid_host_objs.count()
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if count and log:
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LOG.info(f"Found {host_model.__name__}s with bad {fk_field_name}: {count}")
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return invalid_host_objs
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def _find_fk_integrity_errors(apps, host_model_name, fk_model_name, fk_field_name):
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"""Find foreign key integrity errors."""
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host_model = apps.get_model("codex", host_model_name)
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fk_model = apps.get_model("codex", fk_model_name)
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return _find_fk_integrity_errors_with_models(host_model, fk_model, fk_field_name)
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def _delete_query(query, host_model_name, fk_model_name):
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"""Execute the delete on the query."""
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count, _ = query.delete()
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if count:
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LOG.info(f"Deleted {count} {host_model_name}s in nonextant {fk_model_name}s.")
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def _delete_fk_integrity_errors(apps, host_model_name, fk_model_name, fk_field_name):
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"""Delete objects with bad integrity."""
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try:
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if not has_applied_migration(MIGRATION_0026) and (
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host_model_name == "Contributor"
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or fk_model_name == "Contributor"
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or fk_field_name == "contributors"
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):
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LOG.debug(
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|
249
|
-
"Skipping Contributor integrity check until"
|
|
250
|
-
f"migration {MIGRATION_0026} applied."
|
|
251
|
-
)
|
|
252
|
-
return
|
|
253
|
-
|
|
254
|
-
bad_host_objs = _find_fk_integrity_errors(
|
|
255
|
-
apps, host_model_name, fk_model_name, fk_field_name
|
|
256
|
-
)
|
|
257
|
-
_delete_query(bad_host_objs, host_model_name, fk_model_name)
|
|
258
|
-
except OperationalError as exc:
|
|
259
|
-
ok = False
|
|
260
|
-
for arg in exc.args:
|
|
261
|
-
if arg in OPERATIONAL_ERRORS_BEFORE_MIGRATIONS:
|
|
262
|
-
ok = True
|
|
263
|
-
if not ok:
|
|
264
|
-
LOG.exception("Operational error before migrations")
|
|
265
|
-
except Exception:
|
|
266
|
-
LOG.exception("Delete foreign key integrity errors.")
|
|
267
|
-
|
|
268
|
-
|
|
269
|
-
def _null_missing_fk(host_model, fk_model, fk_field_name):
|
|
270
|
-
"""Set missing fks to null."""
|
|
271
|
-
query_missing_fks = _find_fk_integrity_errors_with_models(
|
|
272
|
-
host_model, fk_model, fk_field_name, log=False
|
|
273
|
-
)
|
|
274
|
-
not_null_filter = {f"{fk_field_name}__isnull": False}
|
|
275
|
-
query_missing_fks = query_missing_fks.filter(**not_null_filter)
|
|
276
|
-
count = query_missing_fks.count()
|
|
277
|
-
if count:
|
|
278
|
-
update_dict = {fk_field_name: None, "updated_at": Now()}
|
|
279
|
-
query_missing_fks.update(**update_dict)
|
|
280
|
-
LOG.info(f"Fixed {count} {host_model.__name__}s with missing {fk_field_name}")
|
|
281
|
-
return query_missing_fks.values_list("pk", flat=True)
|
|
282
|
-
|
|
283
|
-
|
|
284
|
-
def _delete_bookmark_integrity_errors(apps):
|
|
285
|
-
"""Fix Bookmarks with non codex model fields."""
|
|
286
|
-
if not has_applied_migration(MIGRATION_0018):
|
|
287
|
-
return
|
|
288
|
-
# Bookmarks that don't reference a valid comic are useless.
|
|
289
|
-
_delete_fk_integrity_errors(apps, "Bookmark", "Comic", "comic")
|
|
290
|
-
|
|
291
|
-
# Bookmarks that aren't linked to a valid session or a user are orphans
|
|
292
|
-
bm_model = apps.get_model("codex", "Bookmark")
|
|
293
|
-
_null_missing_fk(bm_model, Session, "session")
|
|
294
|
-
_null_missing_fk(bm_model, get_user_model(), "user")
|
|
295
|
-
orphan_bms = bm_model.objects.filter(session=None, user=None)
|
|
296
|
-
_delete_query(orphan_bms, "Bookmark", "session or user")
|
|
297
|
-
|
|
298
|
-
|
|
299
|
-
def _repair_library_groups(apps):
|
|
300
|
-
"""Remove non-extant groups from libraries."""
|
|
301
|
-
if not has_applied_migration(MIGRATION_0011):
|
|
302
|
-
return
|
|
303
|
-
library_model = apps.get_model("codex", "library")
|
|
304
|
-
through_model = library_model.groups.through
|
|
305
|
-
valid_groups = Group.objects.all()
|
|
306
|
-
bad_relations = through_model.objects.exclude(group_id__in=valid_groups)
|
|
307
|
-
bad_relations.delete()
|
|
308
|
-
|
|
309
|
-
|
|
310
|
-
def _delete_extra_custom_cover_libraries(apps):
|
|
311
|
-
if not has_applied_migration(MIGRATION_0027):
|
|
312
|
-
return
|
|
313
|
-
library_model = apps.get_model("codex", "library")
|
|
314
|
-
custom_cover_libraries = library_model.objects.filter(covers_only=True)
|
|
315
|
-
if custom_cover_libraries.count() <= 1:
|
|
316
|
-
return
|
|
317
|
-
|
|
318
|
-
# Attempt to remove the bad ones, probably futile
|
|
319
|
-
bad_lib_pks = []
|
|
320
|
-
for library in custom_cover_libraries:
|
|
321
|
-
if library.path != CUSTOM_COVERS_DIR:
|
|
322
|
-
bad_lib_pks.append(library.pk)
|
|
323
|
-
delete_libs = library_model.object.filter(pk__in=bad_lib_pks)
|
|
324
|
-
count = delete_libs.count()
|
|
325
|
-
if count:
|
|
326
|
-
delete_libs.delete()
|
|
327
|
-
LOG.warn(
|
|
328
|
-
f"Removed {count} duplicate custom cover libraries pointing to unused custom cover dirs."
|
|
329
|
-
)
|
|
330
|
-
|
|
331
|
-
custom_cover_libraries = library_model.object.filter(covers_only=True)
|
|
332
|
-
count = custom_cover_libraries.count()
|
|
333
|
-
if count <= 1:
|
|
334
|
-
return
|
|
335
|
-
custom_cover_libraries.delete()
|
|
336
|
-
LOG.warn(
|
|
337
|
-
f"Removed all ({count}) custom cover libraries, Unable to determine valid one. Will recreate upon startup."
|
|
338
|
-
)
|
|
339
|
-
|
|
340
|
-
|
|
341
|
-
def _repair_groups_with_custom_covers(apps):
|
|
342
|
-
if not has_applied_migration(MIGRATION_0027):
|
|
343
|
-
return
|
|
344
|
-
custom_cover_model = apps.get_model("codex", "customcover")
|
|
345
|
-
for model_name, group_letter in CUSTOM_COVER_MODEL_NAMES.items():
|
|
346
|
-
valid_covers = custom_cover_model.objects.filter(group=group_letter)
|
|
347
|
-
group_model = apps.get_model("codex", model_name)
|
|
348
|
-
objs = group_model.objects.exclude(
|
|
349
|
-
Q(custom_cover__isnull=True) | Q(custom_cover__in=valid_covers)
|
|
350
|
-
)
|
|
351
|
-
update_groups = []
|
|
352
|
-
for group in objs:
|
|
353
|
-
group.custom_cover = None
|
|
354
|
-
group.updated_at = Now()
|
|
355
|
-
update_groups.append(group)
|
|
356
|
-
group_model.objects.bulk_update(update_groups, ["custom_cover"])
|
|
357
|
-
count = len(update_groups)
|
|
358
|
-
if count:
|
|
359
|
-
LOG.warn(f"Removed illegal custom cover links from {count} {model_name}s")
|
|
360
|
-
|
|
361
|
-
|
|
362
|
-
def _delete_errors():
|
|
363
|
-
"""DELETE things we can't fix."""
|
|
364
|
-
_delete_extra_custom_cover_libraries(apps)
|
|
365
|
-
|
|
366
|
-
for host_model_name in HAVE_LIBRARY_FKS:
|
|
367
|
-
if host_model_name == "CustomCover" and not has_applied_migration(
|
|
368
|
-
MIGRATION_0027
|
|
369
|
-
):
|
|
370
|
-
continue
|
|
371
|
-
_delete_fk_integrity_errors(apps, host_model_name, "Library", "library")
|
|
372
|
-
|
|
373
|
-
for host_model_name in WATCHED_PATHS:
|
|
374
|
-
_delete_fk_integrity_errors(apps, host_model_name, "Folder", "parent_folder")
|
|
375
|
-
|
|
376
|
-
for host_model_name, groups in GROUP_HOSTS.items():
|
|
377
|
-
for group_model_name in groups:
|
|
378
|
-
group_field_name = group_model_name.lower()
|
|
379
|
-
_delete_fk_integrity_errors(
|
|
380
|
-
apps, host_model_name, group_model_name, group_field_name
|
|
381
|
-
)
|
|
382
|
-
|
|
383
|
-
if has_applied_migration(MIGRATION_0026):
|
|
384
|
-
for fk_model_name in COMIC_FK_FIELDS:
|
|
385
|
-
_delete_fk_integrity_errors(apps, fk_model_name, "Comic", "comic")
|
|
386
|
-
|
|
387
|
-
for fk_model_name, fk_field_name in CONTRIBUTOR_FIELDS.items():
|
|
388
|
-
_delete_fk_integrity_errors(apps, "Contributor", fk_model_name, fk_field_name)
|
|
389
|
-
|
|
390
|
-
_delete_bookmark_integrity_errors(apps)
|
|
391
|
-
|
|
392
|
-
_delete_old_comic_folder_fks()
|
|
393
|
-
|
|
394
|
-
|
|
395
|
-
def _check_field_for_migration(model_name):
|
|
396
|
-
"""Skip some models before migrations."""
|
|
397
|
-
for check_model_name, migration in SKIP_M2M_CHECKS.items():
|
|
398
|
-
if model_name == check_model_name and not has_applied_migration(migration):
|
|
399
|
-
LOG.debug(
|
|
400
|
-
f"Skipping {check_model_name} integrity check until"
|
|
401
|
-
f" migration {migration} applied."
|
|
402
|
-
)
|
|
403
|
-
return True
|
|
404
|
-
return False
|
|
405
|
-
|
|
406
|
-
|
|
407
|
-
def _repair_integrity():
|
|
408
|
-
"""REPAIR the objects that are left."""
|
|
409
|
-
comic_model = apps.get_model("codex", "Comic")
|
|
410
|
-
bad_comic_ids = set()
|
|
411
|
-
for m2m_model_name, field_name in M2M_NAMES.items():
|
|
412
|
-
if _check_field_for_migration(m2m_model_name):
|
|
413
|
-
continue
|
|
414
|
-
try:
|
|
415
|
-
bad_comic_ids |= _fix_comic_m2m_integrity_errors(
|
|
416
|
-
apps, comic_model, m2m_model_name, field_name
|
|
417
|
-
)
|
|
418
|
-
except OperationalError as exc:
|
|
419
|
-
ok = False
|
|
420
|
-
for arg in exc.args:
|
|
421
|
-
if arg in OPERATIONAL_ERRORS_BEFORE_MIGRATIONS:
|
|
422
|
-
ok = True
|
|
423
|
-
if ok:
|
|
424
|
-
LOG.info(
|
|
425
|
-
"Couldn't look for comics with folder integrity problems before "
|
|
426
|
-
"migration 0007. We'll get them on the next restart."
|
|
427
|
-
)
|
|
428
|
-
else:
|
|
429
|
-
LOG.exception("Occurred after migration 0007")
|
|
430
|
-
|
|
431
|
-
if has_applied_migration(MIGRATION_0026):
|
|
432
|
-
for fk_model_name, field_name in COMIC_FK_FIELDS.items():
|
|
433
|
-
try:
|
|
434
|
-
bad_comic_ids |= _fix_comic_fk_integrity_errors(
|
|
435
|
-
apps, comic_model, fk_model_name, field_name
|
|
436
|
-
)
|
|
437
|
-
except Exception:
|
|
438
|
-
LOG.exception(f"Fix fk integrity error {fk_model_name}")
|
|
439
|
-
|
|
440
|
-
_mark_comics_with_bad_rels_for_update(comic_model, bad_comic_ids)
|
|
441
|
-
|
|
442
|
-
_repair_library_groups(apps)
|
|
443
|
-
_repair_groups_with_custom_covers(apps)
|
|
444
|
-
|
|
445
|
-
|
|
446
|
-
def repair_db():
|
|
447
|
-
"""Fix the db but trap errors if it goes wrong."""
|
|
448
|
-
try:
|
|
449
|
-
if SKIP_INTEGRITY_CHECK:
|
|
450
|
-
LOG.info("Skipping integrity check")
|
|
451
|
-
return
|
|
452
|
-
|
|
453
|
-
if not has_applied_migration(MIGRATION_0005):
|
|
454
|
-
LOG.info(
|
|
455
|
-
"Not running integrity checks until migration"
|
|
456
|
-
f"{MIGRATION_0005} has been applied."
|
|
457
|
-
)
|
|
458
|
-
return
|
|
459
|
-
|
|
460
|
-
LOG.debug("Reparing database integrity...")
|
|
461
|
-
_delete_errors()
|
|
462
|
-
_repair_integrity()
|
|
463
|
-
LOG.info("Database integrity confirmed.")
|
|
464
|
-
except OperationalError as exc:
|
|
465
|
-
if NO_MIGRATIONS_TABLE_ERROR in exc.args:
|
|
466
|
-
LOG.debug("Database not constructed yet, skipping integrity check.")
|
|
467
|
-
else:
|
|
468
|
-
raise
|
|
469
|
-
except Exception:
|
|
470
|
-
LOG.exception("Repair DB")
|
|
471
|
-
|
|
472
|
-
|
|
473
|
-
def rebuild_db():
|
|
474
|
-
"""Dump and rebuild the database."""
|
|
475
|
-
# Drastic
|
|
476
|
-
if not REPAIR_FLAG_PATH.exists():
|
|
477
|
-
return
|
|
478
|
-
|
|
479
|
-
LOG.warning("REBUILDING DATABASE!!")
|
|
480
|
-
with sqlite3.connect(REBUILT_DB_PATH) as new_db_conn:
|
|
481
|
-
new_db_cur = new_db_conn.cursor()
|
|
482
|
-
with sqlite3.connect(DB_PATH) as old_db_conn:
|
|
483
|
-
for line in old_db_conn.iterdump():
|
|
484
|
-
if DUMP_LINE_MATCHER.search(line):
|
|
485
|
-
continue
|
|
486
|
-
new_db_cur.execute(line)
|
|
487
|
-
|
|
488
|
-
DB_PATH.rename(BACKUP_DB_PATH)
|
|
489
|
-
LOG.info("Backed up old db to %s", BACKUP_DB_PATH)
|
|
490
|
-
REBUILT_DB_PATH.replace(DB_PATH)
|
|
491
|
-
REPAIR_FLAG_PATH.unlink(missing_ok=True)
|
|
492
|
-
LOG.info("Rebuilt database.")
|
codex/librarian/search/merge.py
DELETED
|
@@ -1,86 +0,0 @@
|
|
|
1
|
-
"""Search Index Merging for Read Optimization."""
|
|
2
|
-
|
|
3
|
-
from pathlib import Path
|
|
4
|
-
from time import time
|
|
5
|
-
from typing import TYPE_CHECKING
|
|
6
|
-
|
|
7
|
-
from humanize import naturaldelta, naturalsize
|
|
8
|
-
|
|
9
|
-
from codex.librarian.search.status import SearchIndexStatusTypes
|
|
10
|
-
from codex.librarian.search.version import VersionMixin
|
|
11
|
-
from codex.settings.settings import SEARCH_INDEX_PATH
|
|
12
|
-
from codex.status import Status
|
|
13
|
-
|
|
14
|
-
if TYPE_CHECKING:
|
|
15
|
-
from codex.search.backend import CodexSearchBackend
|
|
16
|
-
|
|
17
|
-
|
|
18
|
-
class MergeMixin(VersionMixin):
|
|
19
|
-
"""Search Index Merge Methods."""
|
|
20
|
-
|
|
21
|
-
def _is_index_optimized(self, num_segments):
|
|
22
|
-
"""Is the index already in one segment."""
|
|
23
|
-
if num_segments <= 1:
|
|
24
|
-
self.log.info("Search index already optimized.")
|
|
25
|
-
return True
|
|
26
|
-
return False
|
|
27
|
-
|
|
28
|
-
@staticmethod
|
|
29
|
-
def _get_segments_and_len():
|
|
30
|
-
segments = SEARCH_INDEX_PATH.glob("*.seg")
|
|
31
|
-
num_segments = len(tuple(segments))
|
|
32
|
-
return segments, num_segments
|
|
33
|
-
|
|
34
|
-
@staticmethod
|
|
35
|
-
def _get_segments_size(segments):
|
|
36
|
-
size = 0
|
|
37
|
-
for segment in segments:
|
|
38
|
-
size += Path(segment).stat().st_size
|
|
39
|
-
return size
|
|
40
|
-
|
|
41
|
-
def _merge_search_index(self, optimize, status, name):
|
|
42
|
-
"""Optimize search index."""
|
|
43
|
-
self.status_controller.start(status)
|
|
44
|
-
start = time()
|
|
45
|
-
|
|
46
|
-
segments, old_num_segments = self._get_segments_and_len()
|
|
47
|
-
if self._is_index_optimized(old_num_segments):
|
|
48
|
-
return
|
|
49
|
-
self.status_controller.start(status)
|
|
50
|
-
old_size = self._get_segments_size(segments)
|
|
51
|
-
# Optimize
|
|
52
|
-
self.log.info(
|
|
53
|
-
f"Search index found in {old_num_segments} segments," f" merging {name}..."
|
|
54
|
-
)
|
|
55
|
-
backend: CodexSearchBackend = self.engine.get_backend() # type: ignore
|
|
56
|
-
if optimize:
|
|
57
|
-
backend.optimize()
|
|
58
|
-
else:
|
|
59
|
-
backend.merge_small()
|
|
60
|
-
|
|
61
|
-
# Finish
|
|
62
|
-
segments, new_num_segments = self._get_segments_and_len()
|
|
63
|
-
new_size = self._get_segments_size(segments)
|
|
64
|
-
saved = naturalsize(old_size - new_size)
|
|
65
|
-
num_segments_diff = old_num_segments - new_num_segments
|
|
66
|
-
elapsed_time = time() - start
|
|
67
|
-
elapsed = naturaldelta(elapsed_time)
|
|
68
|
-
if num_segments_diff:
|
|
69
|
-
self.log.info(
|
|
70
|
-
f"Merged {num_segments_diff} search index segments in {elapsed}."
|
|
71
|
-
f"Saved {saved}."
|
|
72
|
-
)
|
|
73
|
-
else:
|
|
74
|
-
self.log.info("No small search index segments found.")
|
|
75
|
-
|
|
76
|
-
def merge_search_index(self, optimize=False):
|
|
77
|
-
"""Optimize search index, trapping exceptions."""
|
|
78
|
-
verb = "All" if optimize else "Small"
|
|
79
|
-
name = f"Merge {verb} Segments"
|
|
80
|
-
status = Status(SearchIndexStatusTypes.SEARCH_INDEX_MERGE, subtitle=name)
|
|
81
|
-
try:
|
|
82
|
-
self._merge_search_index(optimize, status, name)
|
|
83
|
-
except Exception:
|
|
84
|
-
self.log.exception("Search index merge.")
|
|
85
|
-
finally:
|
|
86
|
-
self.status_controller.finish(status)
|
|
@@ -1,63 +0,0 @@
|
|
|
1
|
-
"""Search Engine to database matching."""
|
|
2
|
-
|
|
3
|
-
from uuid import uuid4
|
|
4
|
-
|
|
5
|
-
from codex.librarian.search.tasks import SearchIndexUpdateTask
|
|
6
|
-
from codex.models import Timestamp
|
|
7
|
-
from codex.search.engine import CodexSearchEngine
|
|
8
|
-
from codex.settings.settings import SEARCH_INDEX_PATH, SEARCH_INDEX_UUID_PATH
|
|
9
|
-
from codex.threads import QueuedThread
|
|
10
|
-
|
|
11
|
-
|
|
12
|
-
class VersionMixin(QueuedThread):
|
|
13
|
-
"""Search Engine to database matching methods."""
|
|
14
|
-
|
|
15
|
-
def __init__(self, abort_event, *args, **kwargs):
|
|
16
|
-
"""Initialize search engine."""
|
|
17
|
-
self.abort_event = abort_event
|
|
18
|
-
super().__init__(*args, **kwargs)
|
|
19
|
-
queue_kwargs = {
|
|
20
|
-
"log_queue": self.log_queue,
|
|
21
|
-
"librarian_queue": self.librarian_queue,
|
|
22
|
-
}
|
|
23
|
-
self.engine = CodexSearchEngine(queue_kwargs=queue_kwargs)
|
|
24
|
-
|
|
25
|
-
def set_search_index_version(self):
|
|
26
|
-
"""Set the codex db to search index matching id."""
|
|
27
|
-
version = str(uuid4())
|
|
28
|
-
try:
|
|
29
|
-
lv = Timestamp.objects.get(
|
|
30
|
-
key=Timestamp.TimestampChoices.SEARCH_INDEX_UUID.value
|
|
31
|
-
)
|
|
32
|
-
lv.version = version
|
|
33
|
-
lv.save()
|
|
34
|
-
SEARCH_INDEX_PATH.mkdir(parents=True, exist_ok=True)
|
|
35
|
-
with SEARCH_INDEX_UUID_PATH.open("w") as uuid_file:
|
|
36
|
-
uuid_file.write(version)
|
|
37
|
-
except Exception:
|
|
38
|
-
self.log.exception("Setting search index to db synchronization token")
|
|
39
|
-
|
|
40
|
-
def is_search_index_uuid_match(self):
|
|
41
|
-
"""Is this search index for this database."""
|
|
42
|
-
result = False
|
|
43
|
-
try:
|
|
44
|
-
with SEARCH_INDEX_UUID_PATH.open("r") as uuid_file:
|
|
45
|
-
version = uuid_file.read()
|
|
46
|
-
result = Timestamp.objects.filter(
|
|
47
|
-
key=Timestamp.TimestampChoices.SEARCH_INDEX_UUID.value, version=version
|
|
48
|
-
).exists()
|
|
49
|
-
except (FileNotFoundError, Timestamp.DoesNotExist):
|
|
50
|
-
pass
|
|
51
|
-
except Exception:
|
|
52
|
-
self.log.exception("Does search index match database uuid")
|
|
53
|
-
if not result:
|
|
54
|
-
self.log.warning("Database does not match search index.")
|
|
55
|
-
return result
|
|
56
|
-
|
|
57
|
-
def rebuild_search_index_if_db_changed(self):
|
|
58
|
-
"""Rebuild the search index if the db changed."""
|
|
59
|
-
if not self.is_search_index_uuid_match():
|
|
60
|
-
task = SearchIndexUpdateTask(True)
|
|
61
|
-
self.librarian_queue.put(task)
|
|
62
|
-
else:
|
|
63
|
-
self.log.info("Database matches search index.")
|
codex/search/__init__.py
DELETED
|
@@ -1 +0,0 @@
|
|
|
1
|
-
"""Haystack Search Customizations."""
|