codefinetuner 0.1.0__py3-none-any.whl

codefinetuner-0.1.0.dist-info/METADATA

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+Metadata-Version: 2.4
+Name: codefinetuner
+Version: 0.1.0
+Summary: Add your description here
+Project-URL: Homepage, https://github.com/cuolm/codefinetuner
+Project-URL: Repository, https://github.com/cuolm/codefinetuner.git
+Project-URL: Issues, https://github.com/cuolm/codefinetuner/issues
+Author-email: cuolm <cuolm.approach717@passinbox.com>
+License-Expression: Apache-2.0
+License-File: LICENSE.txt
+Classifier: Development Status :: 4 - Beta
+Classifier: License :: OSI Approved :: Apache Software License
+Classifier: Programming Language :: Python :: 3.13
+Classifier: Typing :: Typed
+Requires-Python: >=3.13
+Requires-Dist: bitsandbytes==0.48.2; sys_platform == 'linux' or sys_platform == 'win32'
+Requires-Dist: codebleu>=0.7.0
+Requires-Dist: datasets>=4.3.0
+Requires-Dist: evaluate>=0.4.6
+Requires-Dist: gguf>=0.18.0
+Requires-Dist: matplotlib>=3.10.7
+Requires-Dist: nltk>=3.9.2
+Requires-Dist: numpy>=2.3.4
+Requires-Dist: omegaconf>=2.3.0
+Requires-Dist: peft>=0.17.1
+Requires-Dist: scikit-learn>=1.7.2
+Requires-Dist: sentencepiece>=0.2.1
+Requires-Dist: torch>=2.9.0
+Requires-Dist: transformers>=4.57.1
+Requires-Dist: tree-sitter-language-pack>=0.2.0
+Requires-Dist: tree-sitter<0.23.0,>=0.22.0
+Description-Content-Type: text/markdown
+
+# CodeFinetuner
+[![Build](https://github.com/cuolm/codefinetuner/actions/workflows/tests.yml/badge.svg)](https://github.com/cuolm/codefinetuner/actions)
+[![PyPI](https://img.shields.io/pypi/v/codefinetuner.svg)](https://pypi.org/project/codefinetuner/)
+[![License](https://img.shields.io/github/license/cuolm/codefinetuner.svg)](LICENSE.txt)
+[![Coverage](https://img.shields.io/endpoint?url=https://gist.githubusercontent.com/cuolm/gist_id/raw/coverage.json)](https://github.com/cuolm/codefinetuner/actions)
+
+
+Create your own local code autocomplete model, fine-tuned on your custom code repository, for use in editors like VS Code or Vim/Neovim.
+
+Fine-tuning is achieved by training a Low-Rank Adapter ([LoRA](https://arxiv.org/abs/2106.09685)) to perform Fill-In-the-Middle ([FIM](https://arxiv.org/abs/2207.14255)) completion. 
+
+## Table of Contents
+- [Architecture](#architecture)
+- [Project Structure](#project-structure)
+- [How Training Examples Are Created](#how-training-examples-are-created)
+- [Installation](#installation)
+- [Quick Start](#quick-start)
+- [Configuration](#configuration)
+- [Usage](#usage)
+- [Deployment](#deployment)
+- [Docker](#docker)
+- [Tree-sitter Setup](#tree-sitter-setup) <!-- Link to new docs -->
+- [Tests](#tests)
+- [Resources](#resources)
+- [License](#license)
+
+
+## Architecture
+```text
+Raw Code Files
+     |
+     v
+[Preprocess]  -- tree-sitter parsing -> FIM examples -> tokenized JSONL
+     |
+     v
+[Finetune]    -- LoRA adapter training -> merged model
+     |
+     v
+[Evaluate]    -- CodeBLEU, SentenceBLEU, exact match, line match, perplexity
+     |
+     v
+[Convert]      -- GGUF conversion -> quantized model for deployment
+```
+
+## Project Structure
+```text
+.
+├── src/
+│   └── codefinetuner/           # Core packages
+│       ├── preprocess/
+│       ├── finetune/
+│       ├── evaluate/
+│       └── convert/             
+├── config/                      # User configuration
+│   └── codefinetuner_config.yaml
+├── data/                        # Default data directory (Workspace root)
+├── outputs/                     # Pipeline artifacts (Workspace root)
+├── scripts/                     # Utility scripts
+├── tests/                       # Unit tests 
+├── third_party/                 # External submodules (e.g., custom parsers)
+└── docs/                        # Documentation and assets
+```
+
+## How Training Examples Are Created
+To generate high-quality FIM examples, high-level structural code blocks are extracted (e.g., functions, classes). From these blocks, logical sub-blocks (e.g., statements, expressions) are masked to serve as the "middle" section for the model to predict.
+
+Here is an example illustrating how a single FIM example is created:
+<table>
+  <tr>
+    <td align="center" valign="top">
+      <strong>Source Code File</strong><br>
+      <img src="docs/code_file.png" alt="code_file" width="250">
+    </td>
+    <td align="center" valign="top">
+      <strong>Code Block</strong><br>
+      <img src="docs/code_block.png" alt="code_block" width="250">
+    </td>
+    <td align="center" valign="top">
+      <strong>One Subblock</strong><br>
+      <img src="docs/code_subblock.png" alt="code_subblock" width="250">
+    </td>
+  </tr>
+</table>
+
+```python
+<|fim_prefix|>uint32_t count_bits(uint32_t value){\n  uint32_t count = 0;\n  while(value){\n    
+<|fim_suffix|>    }\n    return count;
+<|fim_middle|>count = count + (value & 1);\n    value = (value >> 1);
+```
+
+Using this technique, rather than randomly splitting code into unrelated text chunks, helps the model learn the logical patterns and structure of your specific codebase.
+
+## Installation
+
+### From PyPI
+```bash
+uv add codefinetuner
+# or
+pip install codefinetuner
+```
+### From Source (Development)
+```bash
+git clone --recurse-submodules https://github.com/cuolm/codefinetuner
+cd codefinetuner
+
+# Using uv (Recommended)
+uv sync
+
+# Using pip
+pip install -r requirements.txt
+pip install -e .
+```
+
+---
+
+## Quick Start
+Create a configuration file according to the [Configuration](#configuration) section.
+```python
+import codefinetuner
+
+# Run the complete pipeline
+codefinetuner.run_pipeline("codefinetuner_config.yaml")
+```
+
+## Configuration
+
+The pipeline uses a single-source-of-truth YAML configuration file. It utilizes YAML anchors (`&globals`) to share core parameters across all stages (`preprocess`, `finetune`, `evaluate`), ensuring consistency and reducing redundancy.
+
+### Configuration Structure
+
+Create a codefinetuner_config.yaml using the template below. For a full list of all available parameters and their effects, see the [Configuration Reference Guide](/docs/config-file.md).
+
+```yaml
+# globals contain all the mandatory parameters.
+globals: &globals
+  workspace_path: null  # null: defaults to current working directory (CWD)
+  model_name: "Qwen/Qwen2.5-Coder-1.5B" 
+  fim_prefix_token: "<|fim_prefix|>"
+  fim_middle_token: "<|fim_middle|>"
+  fim_suffix_token: "<|fim_suffix|>"
+  fim_pad_token: "<|fim_pad|>"
+  eos_token: "<|endoftext|>"
+  label_pad_token_id: -100
+  data_language: "c"
+  data_extensions: [".c", ".h"]
+
+preprocess:
+  <<: *globals                   # Inherits all global parameters
+  split_mode: "manual"
+  max_token_sequence_length: 1024
+  # ... (preprocess specific settings)
+
+finetune:
+  <<: *globals
+  lora_r: 32
+  trainer_num_train_epochs: 1
+  # ... (finetune specific settings)
+
+evaluate:
+  <<: *globals
+  benchmark_sample_size: 4
+  # ... (evaluate specific settings)
+
+```
+> **Note:** For a complete, production-ready example, see [`config/codefinetuner_config.yaml`](/config/codefinetuner_config.yaml).
+
+### Data Preparation
+Place source files in your `raw_data_path` (default: `workspace_path/data`).
+* **Auto Split:** Place files directly in the directory.
+* **Manual Split:** Create `train`, `eval`, and `test` subfolders inside `raw_data_path` and assign files according to your manual split preferences.
+
+## Usage
+
+### CLI Usage
+Run the pipeline using the unified CLI:
+```bash
+uv run codefinetuner --config="config/codefinetuner_config.yaml"
+```
+
+**Pipeline Flags:**
+* `--config`: Specify path to a different config file.
+* `--skip-preprocess`, `--skip-finetune`, `--skip-evaluate`, `--skip-convert`: Skip specific stages.
+
+### Python Module Usage
+```python
+import codefinetuner
+
+# Full pipeline
+codefinetuner.run_pipeline("path/to/codefinetuner_config.yaml")
+
+# Skip stages
+codefinetuner.run_pipeline(
+    "path/to/codefinetuner_config.yaml",
+    skip_preprocess=True,
+    skip_convert=True
+)
+
+# Individual stages
+from codefinetuner import preprocess, finetune
+preprocess.run("config.yaml")
+```
+
+## Deployment: Using the Model
+The `convert` stage converts the model to GGUF format. The final GGUF file is located under `outputs/convert/results/lora_model.gguf`.  
+For a detailed guide on how to use the gguf model with the VS Code extension [llama.vscode](https://github.com/ggml-org/llama-vscode), check out the [inference-vscode](/docs/inference-vscode.md) guide.
+
+
+## Create And Run Docker Image
+
+#### 1. Build the Docker Image
+Build the image from the `Dockerfile`, tagging it as codefinetuner-image.
+```bash
+docker build -t codefinetuner-image .
+```
+#### 2. Prepare Data and Run the Container
+To allow the container to access your data for fine-tuning, use a bind mount to link your host machine's `data` directory to the container.
+- On your host machine (where you run Docker), create a folder named `data` if it doesn't already exist.
+- Put all files you want to use for fine-tuning inside the `data` directory. For `manual` mode, include `train`, `eval`, and `test` subdirectories containing your manually splitted files.
+- Start the container with the bind mount, and open a Bash shell depending on your host machine hardware:
+
+#### NVIDIA GPU (Recommended)
+Use this command to enable CUDA support for `torch` and `bitsandbytes`. Requires the [NVIDIA Container Toolkit](https://docs.nvidia.com/datacenter/cloud-native/container-toolkit/latest/install-guide.html) installed on the host machine.
+
+```bash
+docker run --gpus all -it --rm \
+  -v $(pwd)/data:/app/data \
+  codefinetuner-image /bin/bash
+```
+#### CPU Only
+
+Use this command if no compatible GPU is available. Note that fine-tuning will be significantly slower.
+```bash
+docker run -it --rm \
+  -v $(pwd)/data:/app/data \
+  codefinetuner-image /bin/bash
+```
+
+## Tree-sitter Customization
+Tree-sitter parses code into structural blocks for generating FIM training examples. Customize for new languages or build missing parsers.
+
+- [Add Language Definitions](docs/tree-sitter-customization.md#add-new-language-block-definitions) - Define `block_types`/`subblock_types` in JSON.
+- [Build Custom Parser](docs/tree-sitter-customization.md#build-custom-parser) - Compile from source (e.g., Mojo).
+
+
+## Tests
+```bash
+pytest
+```
+
+## Useful Resources
+- [Qwen2.5-Coder Technical Report](https://arxiv.org/pdf/2409.12186)
+- [Structure-Aware Fill-in-the-Middle Pretraining for Code](https://arxiv.org/pdf/2506.00204)
+- [LORA: LOW-RANK ADAPTATION OF LARGE LANGUAGE MODELS](https://arxiv.org/pdf/2106.09685)
+- [Efficient Training of Language Models to Fill in the Middle](https://arxiv.org/pdf/2207.14255)
+- [From Output to Evaluation: Does Raw Instruction-Tuned Code LLMs Output Suffice for Fill-in-the-Middle Code Generation?](https://arxiv.org/pdf/2505.18789)
+- [CodeBLEU: a Method for Automatic Evaluation of Code Synthesis](https://arxiv.org/pdf/2009.10297)
+- [HF LLM Course](https://huggingface.co/learn/llm-course/chapter1/1)
+- [llama.vscode](https://github.com/ggml-org/llama.vscode)
+
+## License
+Licensed under the [Apache License 2.0](LICENSE.txt).

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+codefinetuner = codefinetuner.pipeline:main

codefinetuner-0.1.0.dist-info/licenses/LICENSE.txt

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