cmem-cmemc 24.1.4__py3-none-any.whl → 24.2.0__py3-none-any.whl

cmem_cmemc/smart_path/clients/__init__.py

@@ -0,0 +1,63 @@
+"""Client module to handle Path API calls."""
+
+from __future__ import annotations
+
+from abc import ABC, abstractmethod
+from typing import TYPE_CHECKING
+
+if TYPE_CHECKING:
+    from collections.abc import Generator
+
+
+class StoragePath(ABC):
+    """Storage path interface."""
+
+    def __init__(self, path: str):
+        self.path = path
+
+    @property
+    @abstractmethod
+    def suffix(self) -> str:
+        """Return the suffix of the path."""
+
+    @property
+    @abstractmethod
+    def name(self) -> str:
+        """Return the file name."""
+
+    @property
+    @abstractmethod
+    def parent(self) -> StoragePath:
+        """The logical parent of the path."""
+
+    @abstractmethod
+    def is_dir(self) -> bool:
+        """Check if the path is a directory."""
+
+    @abstractmethod
+    def is_file(self) -> bool:
+        """Check if the path is a file."""
+
+    @abstractmethod
+    def exists(self) -> bool:
+        """Check if the path exists."""
+
+    @abstractmethod
+    def mkdir(self, parents: bool = False, exist_ok: bool = False) -> None:
+        """Create a directory."""
+
+    @abstractmethod
+    def absolute(self) -> StoragePath:
+        """Return an absolute version of this path"""
+
+    def resolve(self) -> StoragePath:
+        """Resolve the resolved path of the path."""
+        raise NotImplementedError(f"resolve in {self.__class__} is not implemented yet.")
+
+    @abstractmethod
+    def glob(self, pattern: str) -> Generator[StoragePath, StoragePath, StoragePath]:
+        """Iterate over this subtree and yield all existing files"""
+
+    @abstractmethod
+    def __truediv__(self, key: str) -> StoragePath:
+        """Return StoragePath with appending the key to the exising path"""

cmem_cmemc/smart_path/clients/http.py

@@ -0,0 +1,65 @@
+"""Provides functionality for interacting with http/https paths"""
+
+from __future__ import annotations
+
+from typing import TYPE_CHECKING
+
+from cmem_cmemc.smart_path.clients import StoragePath
+
+if TYPE_CHECKING:
+    from collections.abc import Generator
+
+
+class HttpPath(StoragePath):
+    """Client class for interacting with Amazon S3 storage.
+
+    This class provides methods for working with http paths within the context
+    of the `Path` application.
+    """
+
+    @property
+    def suffix(self) -> str:
+        """Return the suffix of the path."""
+        raise NotImplementedError(f"suffix in {self.__class__} is not implemented yet.")
+
+    @property
+    def name(self) -> str:
+        """Determine the name of the path."""
+        return self.path.split("/")[-1]
+
+    @property
+    def parent(self) -> HttpPath:
+        """The logical parent of the path."""
+        raise NotImplementedError(f"parent in {self.__class__} is not implemented yet.")
+
+    def is_dir(self) -> bool:
+        """Determine if path is a directory or not."""
+        return False
+
+    def is_file(self) -> bool:
+        """Determine if path is a file or not."""
+        return not self.is_dir()
+
+    def exists(self) -> bool:
+        """Return the suffix of the path."""
+        raise NotImplementedError(f"exists in {self.__class__} is not implemented yet.")
+
+    def mkdir(self, parents: bool = False, exist_ok: bool = False) -> None:
+        """Return the suffix of the path."""
+        raise NotImplementedError(f"mkdir in {self.__class__} is not implemented yet.")
+
+    def absolute(self) -> HttpPath:
+        """Return an absolute version of this path"""
+        raise NotImplementedError(f"absolute in {self.__class__} is not implemented yet.")
+
+    def resolve(self) -> HttpPath:
+        """Resolve the resolved path of the path."""
+        raise NotImplementedError(f"resolve in {self.__class__} is not implemented yet.")
+
+    def glob(self, pattern: str) -> Generator[StoragePath, StoragePath, StoragePath]:
+        """Iterate over this subtree and yield all existing files"""
+        raise NotImplementedError(f"glob in {self.__class__} is not implemented yet.")
+
+    def __truediv__(self, key: str) -> HttpPath:
+        """Return path with appending the key"""
+        raise NotImplementedError(f"__truediv__ in {self.__class__} is not implemented yet.")

cmem_cmemc/utils.py

@@ -2,23 +2,26 @@
 
 import json
 import os
+import pathlib
 import re
 import sys
 import unicodedata
 from dataclasses import dataclass
 from importlib.metadata import version as cmemc_version
-from pathlib import Path
+from zipfile import BadZipFile, ZipFile
 
 import requests
 from bs4 import BeautifulSoup
 from cmem.cmempy.dp.admin import get_prometheus_data
 from cmem.cmempy.dp.proxy.graph import get_graphs_list
+from cmem.cmempy.queries import QueryCatalog
 from cmem.cmempy.workspace.projects.project import get_projects
 from prometheus_client import Metric
 from prometheus_client.parser import text_string_to_metric_families
 
 from cmem_cmemc.constants import NAMESPACES
 from cmem_cmemc.context import ApplicationContext
+from cmem_cmemc.smart_path import SmartPath as Path
 
 
 def get_version() -> str:
@@ -88,7 +91,7 @@ def read_rdf_graph_files(directory_path: str) -> list[tuple[str, str]]:
             full_file_path = Path(root) / _file
             graph_file_name = _file + ".graph"
             full_graph_file_name_path = Path(root) / graph_file_name
-            if not _file.endswith(".graph") and Path(full_graph_file_name_path).exists():
+            if not _file.endswith(".graph") and full_graph_file_name_path.exists():
                 graph_name = read_file_to_string(str(full_graph_file_name_path)).strip()
                 rdf_graphs.append((str(full_file_path.resolve()), graph_name))
     return rdf_graphs
@@ -97,7 +100,7 @@ def read_rdf_graph_files(directory_path: str) -> list[tuple[str, str]]:
 def read_file_to_string(file_path: str) -> str:
     """Read file to string."""
     with Path(file_path).open(mode="rb") as _file:
-        return _file.read().decode("utf-8")
+        return str(_file.read().decode("utf-8"))
 
 
 def get_graphs(writeable: bool = True, readonly: bool = True) -> list:
@@ -304,24 +307,30 @@ class PublishedPackage:
 
 def get_published_packages() -> list[PublishedPackage]:
     """Get a scraped list of plugin packages scraped from pypi.org."""
-    url = "https://pypi.org/search/?q=%22cmem-plugin-%22"
-    soup = BeautifulSoup(requests.get(url, timeout=5).content, "html.parser")
+    url_pattern = "https://pypi.org/search/?q=%22cmem-plugin-%22&page={}"
     packages = []
-    snippets = soup.find_all("a", class_="package-snippet")
-    for _ in snippets:
-        name = _.findChildren(class_="package-snippet__name")[0].getText()
-        if name == "cmem-plugin-base":
-            continue
-        if not name.startswith("cmem-plugin-"):
-            continue
-        description = _.findChildren(class_="package-snippet__description")[0].getText()
-        package_version = _.findChildren(class_="package-snippet__version")[0].getText()
-        published = _.findChildren(name="time")[0].attrs["datetime"]
-        packages.append(
-            PublishedPackage(
-                name=name, description=description, version=package_version, published=published
+    page = 0
+    while True:
+        page += 1
+        url = url_pattern.format(page)
+        soup = BeautifulSoup(requests.get(url, timeout=5).content, "html.parser")
+        snippets = soup.find_all("a", class_="package-snippet")
+        if len(snippets) == 0:
+            break
+        for _ in snippets:
+            name = _.findChildren(class_="package-snippet__name")[0].getText()
+            if name == "cmem-plugin-base":
+                continue
+            if not name.startswith("cmem-plugin-"):
+                continue
+            description = _.findChildren(class_="package-snippet__description")[0].getText()
+            package_version = _.findChildren(class_="package-snippet__version")[0].getText()
+            published = _.findChildren(name="time")[0].attrs["datetime"]
+            packages.append(
+                PublishedPackage(
+                    name=name, description=description, version=package_version, published=published
+                )
             )
-        )
     return packages
 
 
@@ -344,3 +353,50 @@ def convert_qname_to_iri(qname: str, default_ns: str) -> str:
         return default_ns + qname[1:]
 
     return qname
+
+
+def get_query_text(file_or_uri: str, required_projections: set) -> str:
+    """Get query text for a file or graph catalog URI.
+
+    Args:
+    ----
+        file_or_uri (str): The file path or URI to fetch the query from.
+        required_projections (set): A set of required projections.
+
+    Returns:
+    -------
+        str: The query text.
+
+    Raises:
+    ------
+        ValueError: If the input is not a readable file or a query URI,
+                    or if the query contains placeholders,
+                    or if the query does not include the required projections.
+
+    """
+    sparql_query = QueryCatalog().get_query(file_or_uri)
+    if sparql_query is None:
+        raise ValueError(f"{file_or_uri} is neither a readable file nor a query URI.")
+
+    if sparql_query.get_placeholder_keys():
+        raise ValueError("Placeholder queries are not supported.")
+
+    result = sparql_query.get_json_results()
+    projected_vars = set(result["head"]["vars"])
+
+    missing_projections = required_projections - projected_vars
+    if missing_projections:
+        missing = ", ".join(missing_projections)
+        raise ValueError(f"Select query must include projections for: {missing}")
+    txt: str = sparql_query.text
+    return txt
+
+
+def validate_zipfile(zipfile: str | pathlib.Path) -> bool:
+    """Validate a zipfile."""
+    zipfile = pathlib.Path(zipfile)
+    try:
+        ZipFile(zipfile).testzip()
+    except BadZipFile:
+        return False
+    return True

{cmem_cmemc-24.1.4.dist-info → cmem_cmemc-24.2.0.dist-info}/LICENSE

@@ -199,4 +199,4 @@
    distributed under the License is distributed on an "AS IS" BASIS,
    WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
    See the License for the specific language governing permissions and
-   limitations under the License.
+   limitations under the License.

{cmem_cmemc-24.1.4.dist-info → cmem_cmemc-24.2.0.dist-info}/METADATA

@@ -1,9 +1,9 @@
 Metadata-Version: 2.1
 Name: cmem-cmemc
-Version: 24.1.4
+Version: 24.2.0
 Summary: Command line client for eccenca Corporate Memory
 Home-page: https://eccenca.com/go/cmemc
-License: Apache 2.0
+License: Apache-2.0
 Author: eccenca
 Author-email: cmempy-developer@eccenca.com
 Requires-Python: >=3.10,<4.0
@@ -15,7 +15,6 @@ Classifier: Intended Audience :: Information Technology
 Classifier: Intended Audience :: Science/Research
 Classifier: Intended Audience :: System Administrators
 Classifier: License :: OSI Approved :: Apache Software License
-Classifier: License :: Other/Proprietary License
 Classifier: Natural Language :: English
 Classifier: Operating System :: OS Independent
 Classifier: Programming Language :: Python :: 3
@@ -26,25 +25,28 @@ Classifier: Programming Language :: Python :: 3 :: Only
 Classifier: Topic :: Database
 Classifier: Topic :: Software Development :: Testing
 Classifier: Topic :: Utilities
-Requires-Dist: beautifulsoup4 (>=4.12.2,<5.0.0)
-Requires-Dist: certifi (>=2023.5.7)
+Requires-Dist: beautifulsoup4 (>=4.12.3,<5.0.0)
+Requires-Dist: certifi (>=2024.2.2)
 Requires-Dist: click (>=8.1.7,<9.0.0)
-Requires-Dist: click-didyoumean (>=0.3.0,<0.4.0)
-Requires-Dist: click-help-colors (>=0.9.1,<0.10.0)
-Requires-Dist: cmem-cmempy (==24.1.1)
-Requires-Dist: configparser (>=5.3.0,<6.0.0)
-Requires-Dist: jinja2 (>=3.1.2,<4.0.0)
-Requires-Dist: natsort (>=8.3.1,<9.0.0)
-Requires-Dist: prometheus-client (>=0.16.0,<0.17.0)
-Requires-Dist: pygments (>=2.15.1,<3.0.0)
-Requires-Dist: pyjwt (>=2.7.0,<3.0.0)
-Requires-Dist: python-dateutil (>=2.8.2,<3.0.0)
+Requires-Dist: click-didyoumean (>=0.3.1,<0.4.0)
+Requires-Dist: click-help-colors (>=0.9.4,<0.10.0)
+Requires-Dist: cmem-cmempy (==24.2.0)
+Requires-Dist: configparser (>=6.0.1,<7.0.0)
+Requires-Dist: jinja2 (>=3.1.3,<4.0.0)
+Requires-Dist: junit-xml (>=1.9,<2.0)
+Requires-Dist: natsort (>=8.4.0,<9.0.0)
+Requires-Dist: pip (>=24.2,<25.0)
+Requires-Dist: prometheus-client (>=0.20.0,<0.21.0)
+Requires-Dist: pygments (>=2.17.2,<3.0.0)
+Requires-Dist: pyjwt (>=2.8.0,<3.0.0)
+Requires-Dist: python-dateutil (>=2.9.0.post0,<3.0.0)
 Requires-Dist: requests (>=2.31.0,<3.0.0)
-Requires-Dist: rich (>=13.7.0,<14.0.0)
+Requires-Dist: rich (>=13.7.1,<14.0.0)
 Requires-Dist: six (>=1.16.0,<2.0.0)
+Requires-Dist: smart-open (>=7.0.4,<8.0.0)
 Requires-Dist: timeago (>=1.0.16,<2.0.0)
-Requires-Dist: treelib (>=1.6.4,<2.0.0)
-Requires-Dist: urllib3 (>=2,<3)
+Requires-Dist: treelib (>=1.7.0,<2.0.0)
+Requires-Dist: urllib3 (>=2.2.1,<3.0.0)
 Description-Content-Type: text/markdown
 
 # cmemc

cmem_cmemc-24.2.0.dist-info/RECORD

@@ -0,0 +1,42 @@
+cmem_cmemc/__init__.py,sha256=Uwm6QW_Bou1VtRWVRcnMs1ilHVCi9moddXgcEqs6c3E,5484
+cmem_cmemc/_cmemc.zsh,sha256=fmkrBHIQxus8cp2AgO1tzZ5mNZdGL_83cYz3a9uAdsg,1326
+cmem_cmemc/commands/__init__.py,sha256=sFzT-3i01sLlxL8_nSTXaYerDfTo3fTEvvcL3jx3Y50,3681
+cmem_cmemc/commands/acl.py,sha256=8Xvd98-aR-tDY9y8QB8varZgOOCOI4DpKnhDqKDNfIo,15597
+cmem_cmemc/commands/admin.py,sha256=YYl8sHUS9gewgEfVALJYwbc1xpUK7mX-RoJpiXlAqr0,9159
+cmem_cmemc/commands/client.py,sha256=23Sc3h64eAMaB4bJVfiamR470DMpDj1hsPWKsxUSMLg,5039
+cmem_cmemc/commands/config.py,sha256=9-xEtHoJyaqU9J7C8a3Q7SpPvJQHLufMXxZYuXYQ5Pk,5699
+cmem_cmemc/commands/dataset.py,sha256=_6pZyYOpIpv6EU2Cg1GJnCVLEVWcGaV9AUyCskhcT8U,30282
+cmem_cmemc/commands/graph.py,sha256=eVJ6SJiDD_xIkE-Ua0PNiI_K4pAQLkP-Puk_ZCDsXBM,27935
+cmem_cmemc/commands/metrics.py,sha256=BlZvYvp1RWLl9rEknxxcOnOh2_zQgGqMEEXFwtJa58E,7832
+cmem_cmemc/commands/project.py,sha256=Dgnd5MxBtJ8zS-wN-1HFraim2PoL4s8LBw6SUeh94b8,19734
+cmem_cmemc/commands/python.py,sha256=Mwt2wZyXOlrnc3nzbnt2wM441IKvxFBE2a3P54uYhk8,10285
+cmem_cmemc/commands/query.py,sha256=r9eTjoB_PR_gsb3R0jIU0oVGThDbs2LmFwRoycBTvYg,26938
+cmem_cmemc/commands/resource.py,sha256=n6ri6Tu2sNUNZuNfNGpRnMQxOx9VeTFGL1OWXUKKpjE,7534
+cmem_cmemc/commands/scheduler.py,sha256=L9Cl7u3Nq3UjfgRzayivxxCHq2U6ZtpqtTCsXsndnFg,8512
+cmem_cmemc/commands/store.py,sha256=esFPX4b8TnN64F4XMCrT44JS5DSoCGjWxlncGYyiW1s,9254
+cmem_cmemc/commands/user.py,sha256=0BbPoPhguSeMjLUn29Qh3kRcMbpQ75bAwDHgYWrZMyQ,12288
+cmem_cmemc/commands/validation.py,sha256=hGCXKdZ3q8VkhiFuzsz1IIKYerGggxrW7JXgdlo92Qc,27963
+cmem_cmemc/commands/variable.py,sha256=IvQ-Yzg2z8Hb-ZstEuOCTMBDg0N931z_73K9xZPbdoM,11356
+cmem_cmemc/commands/vocabulary.py,sha256=mDJ6eWKtN-ChPjnST6Xy8gmPNlO1pE7vzz_tkgGvUlQ,17342
+cmem_cmemc/commands/workflow.py,sha256=nBI7pr54FqBJMhYc__CQW7BxI9DdVUYsvXZLsskdwoU,25315
+cmem_cmemc/commands/workspace.py,sha256=pRx4hesL-z34m2V-FyTk4FfXErJugLDD6ufbqL6KJd8,4191
+cmem_cmemc/completion.py,sha256=oP8I-hVe3KvzQ2cjyaCzSsMpoaKw9A06pVLiA5Owlaw,43135
+cmem_cmemc/constants.py,sha256=s16jrvmIt42a1SrahwjON5prk8ry6MuAXHeBnuMDZyY,422
+cmem_cmemc/context.py,sha256=fiMciWYlnBi0vuyBzIW2KIODxjm7XjzCMtoMYMuqRDI,18538
+cmem_cmemc/exceptions.py,sha256=SpUHdmVM8cZpSjBv6ICgr9NLr3OJ5XO42DlvjohprVo,232
+cmem_cmemc/manual_helper/__init__.py,sha256=G3Lqw2aPxo8x63Tg7L0aa5VD9BMaRzZDmhrog7IuEPg,43
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+cmem_cmemc/manual_helper/multi_page.py,sha256=K-S2_NubrHGynO5I_IMAanO2pZN2KETUV00wpjMqvjI,12171
+cmem_cmemc/manual_helper/single_page.py,sha256=sVSeaZmPa-Cs6dtp27MqyiO6rIrskY9BtDyeAZhBWXM,1477
+cmem_cmemc/object_list.py,sha256=Iyl5cu8CmeT_2RNKDsjhhSsoWoQ6AUh0rKzKwHV_Ruc,13106
+cmem_cmemc/parameter_types/__init__.py,sha256=Jqhwnw5a2oPNMClzUyovWiieK60RCl3rvSNr-t3wP84,36
+cmem_cmemc/parameter_types/path.py,sha256=ATwvdXHqI5GjPw9p2jCoN2pLoXlRrxPTvI0Q9Z2k_FI,1868
+cmem_cmemc/smart_path/__init__.py,sha256=zDgm1kDrzLyCuIcNb8VXSdnb_CcVNjGkjgiIDVlsh74,3023
+cmem_cmemc/smart_path/clients/__init__.py,sha256=YFOm69BfTCRvAcJjN_CoUmCv3kzEciyYOPUG337p_pA,1696
+cmem_cmemc/smart_path/clients/http.py,sha256=3clZu2v4uuOvPY4MY_8SVSy7hIXJDNooahFRBRpy0ok,2347
+cmem_cmemc/utils.py,sha256=eKXo0bVbEyaW-bARbodxv0gggnnbB6FE5pfI8MWR0cI,13173
+cmem_cmemc-24.2.0.dist-info/LICENSE,sha256=z8d0m5b2O9McPEK1xHG_dWgUBT6EfBDz6wA0F7xSPTA,11358
+cmem_cmemc-24.2.0.dist-info/METADATA,sha256=NP18u40La3sRgvUlMnmdgtd5sb8Dq1xV8O-cN-Dx5Sc,5572
+cmem_cmemc-24.2.0.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
+cmem_cmemc-24.2.0.dist-info/entry_points.txt,sha256=znWUTG-zgDITu6Frsd-OtNxBxj6Uo8Fa7bz6gaZYMrA,41
+cmem_cmemc-24.2.0.dist-info/RECORD,,

cmem_cmemc-24.1.4.dist-info/RECORD

@@ -1,37 +0,0 @@
-cmem_cmemc/__init__.py,sha256=z7zjBQWM1c2nW9ylGUelIPiKBtXhIO38qILBJXzuEWs,5532
-cmem_cmemc/_cmemc.zsh,sha256=fmkrBHIQxus8cp2AgO1tzZ5mNZdGL_83cYz3a9uAdsg,1326
-cmem_cmemc/commands/__init__.py,sha256=_PsHWhMFwyfRAYInt0AOs3dA3Cuqhsnf_enFLjxVCGQ,3626
-cmem_cmemc/commands/acl.py,sha256=cA76UvQquhZc9MdS3e94kcfSn9V_RzTQ5XM0Ko6w6hM,13769
-cmem_cmemc/commands/admin.py,sha256=pv9N9laUWV7xevOw0toLBezRz2_B5spcgwU2B-pqaAY,8681
-cmem_cmemc/commands/client.py,sha256=23Sc3h64eAMaB4bJVfiamR470DMpDj1hsPWKsxUSMLg,5039
-cmem_cmemc/commands/config.py,sha256=9-xEtHoJyaqU9J7C8a3Q7SpPvJQHLufMXxZYuXYQ5Pk,5699
-cmem_cmemc/commands/dataset.py,sha256=hn3449Aby_lMgBHumSHqFn6SZS9q3cmh3ZMoUOG85RE,30198
-cmem_cmemc/commands/graph.py,sha256=_VtYwOU3SmNbKAQaSKHrVSTOSP3FCrs-W4jmzTQzx7M,27329
-cmem_cmemc/commands/metrics.py,sha256=BlZvYvp1RWLl9rEknxxcOnOh2_zQgGqMEEXFwtJa58E,7832
-cmem_cmemc/commands/project.py,sha256=XP4vovTTgMzvO-218SpWYnFejayWoNN4DLTp448zVuU,19268
-cmem_cmemc/commands/python.py,sha256=4fYWztPZjLVuz12vuApHE8el9zQvbnwGDiLh1fo7vqA,9666
-cmem_cmemc/commands/query.py,sha256=mx_pZB9ovD8j_svpdDTE82R1pUrwL41OICwcExpXA4s,26792
-cmem_cmemc/commands/resource.py,sha256=n6ri6Tu2sNUNZuNfNGpRnMQxOx9VeTFGL1OWXUKKpjE,7534
-cmem_cmemc/commands/scheduler.py,sha256=L9Cl7u3Nq3UjfgRzayivxxCHq2U6ZtpqtTCsXsndnFg,8512
-cmem_cmemc/commands/store.py,sha256=PybRXCO6R84lEWR8fsTB1jZrc8CMGrWejpruPuM9lIM,6741
-cmem_cmemc/commands/user.py,sha256=0BbPoPhguSeMjLUn29Qh3kRcMbpQ75bAwDHgYWrZMyQ,12288
-cmem_cmemc/commands/validation.py,sha256=Kr5zk_9_LPoRz11LVJ_vkEhP2KrVg8Ns2aiMfiCt-cI,19984
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