cmd-queue 0.2.0__py3-none-any.whl → 0.2.2__py3-none-any.whl
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- cmd_queue/__init__.py +1 -1
- cmd_queue/serial_queue.py +55 -59
- cmd_queue/slurm_queue.py +353 -44
- cmd_queue/slurmify.py +116 -0
- cmd_queue/tmux_queue.py +15 -2
- cmd_queue/util/util_bash.py +52 -0
- cmd_queue/util/util_tmux.py +76 -0
- {cmd_queue-0.2.0.dist-info → cmd_queue-0.2.2.dist-info}/METADATA +213 -175
- {cmd_queue-0.2.0.dist-info → cmd_queue-0.2.2.dist-info}/RECORD +13 -11
- {cmd_queue-0.2.0.dist-info → cmd_queue-0.2.2.dist-info}/WHEEL +1 -1
- {cmd_queue-0.2.0.dist-info → cmd_queue-0.2.2.dist-info}/LICENSE +0 -0
- {cmd_queue-0.2.0.dist-info → cmd_queue-0.2.2.dist-info}/entry_points.txt +0 -0
- {cmd_queue-0.2.0.dist-info → cmd_queue-0.2.2.dist-info}/top_level.txt +0 -0
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@@ -0,0 +1,52 @@
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def bash_json_dump(json_fmt_parts, fpath):
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r"""
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Generate a printf bash command that dumps a JSON file indicating some
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status in a bash environment.
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Args:
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List[Tuple[str, str, str]]: A list of 3-tuples where each tuple contains:
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- The JSON key (str)
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- The printf format string (str)
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- The bash expression (str) that provides the value to be printed
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fpath (str): Path where the bash script should write the JSON file.
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Returns:
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str: The bash command that will perform the printf.
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Example:
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>>> from cmd_queue.util.util_bash import * # NOQA
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>>> json_fmt_parts = [
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>>> ('home', '%s', '$HOME'),
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>>> ('const', '%s', 'MY_CONSTANT'),
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>>> ('ps2', '"%s"', '$PS2'),
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>>> ]
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>>> fpath = 'out.json'
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>>> dump_code = bash_json_dump(json_fmt_parts, fpath)
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>>> print(dump_code)
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printf '{"home": %s, "const": %s, "ps2": "%s"}\n' \
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"$HOME" "MY_CONSTANT" "$PS2" \
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> out.json
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Example:
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>>> from cmd_queue.util.util_bash import * # NOQA
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>>> json_fmt_parts = []
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>>> fpath = 'out.json'
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>>> dump_code = bash_json_dump(json_fmt_parts, fpath)
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>>> print(dump_code)
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printf '{}\n' \
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\
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> out.json
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"""
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printf_body_parts = [
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'"{}": {}'.format(k, f) for k, f, v in json_fmt_parts
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]
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printf_arg_parts = [
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'"{}"'.format(v) for k, f, v in json_fmt_parts
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]
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printf_body = r"'{" + ", ".join(printf_body_parts) + r"}\n'"
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printf_args = ' '.join(printf_arg_parts)
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redirect_part = '> ' + str(fpath)
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printf_part = 'printf ' + printf_body + ' \\\n ' + printf_args
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dump_code = printf_part + ' \\\n ' + redirect_part
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return dump_code
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cmd_queue/util/util_tmux.py
CHANGED
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class tmux:
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"""
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TODO:
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- [ ] should use libtmux instead, or provide a compatible minimal API.
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Example:
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>>> # xdoctest: +SKIP
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>>> from cmd_queue.util.util_tmux import tmux
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>>> sessions = tmux.list_sessions()
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"""
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@staticmethod
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def list_sessions():
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@staticmethod
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def kill_session(target_session, verbose=3):
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return ub.cmd(tmux._kill_session_command(target_session), verbose=verbose)
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@staticmethod
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def kill_pane(pane_id, verbose=3):
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return ub.cmd(f'tmux kill-pane -t {pane_id}', verbose=verbose)
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@staticmethod
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def list_panes(target_session):
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"""
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Ignore:
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from cmd_queue.util.util_tmux import tmux
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sessions = tmux.list_sessions()
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rows = []
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for session in tmux.list_sessions():
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target_session = session['id']
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rows.extend(tmux.list_panes(target_session))
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print(f'rows = {ub.urepr(rows, nl=1)}')
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"""
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import json
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# References:
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# https://github.com/tmux-python/libtmux/blob/f705713c7aff1b14e8f8f3ca53d1b0b6ba6e98d0/src/libtmux/formats.py#L80
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PANE_FORMATS = [
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"pane_id",
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"pane_index",
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"pane_pid",
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"pane_active",
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"pane_dead",
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"pane_in_mode",
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"pane_synchronized",
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"pane_tty",
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"pane_start_command",
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"pane_start_path",
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"pane_current_path",
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"pane_current_command",
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"cursor_x",
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"cursor_y",
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"scroll_region_upper",
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"scroll_region_lower",
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"saved_cursor_x",
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"saved_cursor_y",
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"alternate_on",
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"alternate_saved_x",
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"alternate_saved_y",
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"cursor_flag",
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"insert_flag",
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"keypad_cursor_flag",
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"keypad_flag",
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"wrap_flag",
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"mouse_standard_flag",
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"mouse_button_flag",
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"mouse_any_flag",
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"mouse_utf8_flag",
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"history_size",
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"history_limit",
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"history_bytes",
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"pane_width",
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"pane_height",
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# "pane_title", # removed in 3.1+
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]
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format_code = json.dumps({k: '#{' + k + '}' for k in PANE_FORMATS})
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rows = []
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out = ub.cmd(['tmux', 'list-panes', '-t', str(target_session), '-F', format_code], verbose=0)
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for line in out.stdout.strip().split('\n'):
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row = json.loads(line)
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rows.append(row)
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return rows
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Metadata-Version: 2.
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Metadata-Version: 2.2
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Name: cmd_queue
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Version: 0.2.
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Version: 0.2.2
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Summary: The cmd_queue module for a DAG of bash commands
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Home-page: https://gitlab.kitware.com/computer-vision/cmd_queue
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Author: Kitware Inc., Jon Crall
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Classifier: Programming Language :: Python :: 3.10
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Classifier: Programming Language :: Python :: 3.11
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Classifier: Programming Language :: Python :: 3.12
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Classifier: Programming Language :: Python :: 3.13
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Requires-Python: >=3.8
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Description-Content-Type: text/x-rst
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License-File: LICENSE
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Requires-Dist: numpy==1.19.3; (python_version < "3.10" and python_version >= "3.6.0") and extra == "runtime-strict"
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181
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Requires-Dist: ubelt==1.3.0; extra == "runtime-strict"
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182
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Requires-Dist: networkx==2.8; (python_version < "4.0" and python_version >= "3.11") and extra == "runtime-strict"
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183
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+
Requires-Dist: networkx==2.7; (python_version < "3.11" and python_version >= "3.8") and extra == "runtime-strict"
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184
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+
Requires-Dist: networkx==2.6.2; (python_version < "3.8" and python_version >= "3.7") and extra == "runtime-strict"
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185
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Requires-Dist: networkx<=2.5.1,==2.5.1; (python_version < "3.7.0" and python_version >= "3.6.0") and extra == "runtime-strict"
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186
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+
Requires-Dist: rich==12.5.1; extra == "runtime-strict"
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187
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+
Requires-Dist: pandas==2.2.3; (python_version < "4.0" and python_version >= "3.13") and extra == "runtime-strict"
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188
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+
Requires-Dist: pandas==2.1.1; (python_version < "3.13" and python_version >= "3.12") and extra == "runtime-strict"
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189
|
+
Requires-Dist: pandas==1.5.0; (python_version < "3.12" and python_version >= "3.11") and extra == "runtime-strict"
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190
|
+
Requires-Dist: pandas==1.4.0; (python_version < "3.11" and python_version >= "3.10") and extra == "runtime-strict"
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191
|
+
Requires-Dist: pandas==1.4.0; (python_version < "3.10" and python_version >= "3.9") and extra == "runtime-strict"
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192
|
+
Requires-Dist: pandas==1.4.0; (python_version < "3.9" and python_version >= "3.8") and extra == "runtime-strict"
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193
|
+
Requires-Dist: pandas==1.3.5; (python_version < "3.8" and python_version >= "3.7") and extra == "runtime-strict"
|
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194
|
+
Requires-Dist: pandas==1.1.5; (python_version < "3.7" and python_version >= "3.6") and extra == "runtime-strict"
|
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195
|
+
Requires-Dist: scriptconfig==0.7.9; extra == "runtime-strict"
|
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196
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+
Requires-Dist: psutil==5.9.1; extra == "runtime-strict"
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197
|
+
Requires-Dist: ruamel.yaml==0.17.22; extra == "runtime-strict"
|
|
182
198
|
Provides-Extra: tests-strict
|
|
183
|
-
Requires-Dist:
|
|
184
|
-
Requires-Dist:
|
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185
|
-
Requires-Dist:
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186
|
-
Requires-Dist:
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187
|
-
Requires-Dist: coverage
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188
|
-
Requires-Dist: coverage
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189
|
-
Requires-Dist: coverage
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190
|
-
Requires-Dist:
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191
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-
Requires-Dist:
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192
|
-
|
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193
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-
Requires-Dist:
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194
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-
Requires-Dist:
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195
|
-
Requires-Dist:
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196
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-
Requires-Dist:
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197
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-
Requires-Dist:
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198
|
-
Requires-Dist:
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|
199
|
-
Requires-Dist:
|
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199
|
+
Requires-Dist: pytest==7.1.0; python_version >= "3.7" and extra == "tests-strict"
|
|
200
|
+
Requires-Dist: pytest==6.2.0; (python_version < "3.7" and python_version >= "3.6") and extra == "tests-strict"
|
|
201
|
+
Requires-Dist: xdoctest==1.0.1; extra == "tests-strict"
|
|
202
|
+
Requires-Dist: pytest-cov==3.0.0; python_version >= "3.6.0" and extra == "tests-strict"
|
|
203
|
+
Requires-Dist: coverage==6.1.1; python_version >= "3.10" and extra == "tests-strict"
|
|
204
|
+
Requires-Dist: coverage==5.3.1; (python_version < "3.10" and python_version >= "3.9") and extra == "tests-strict"
|
|
205
|
+
Requires-Dist: coverage==6.1.1; (python_version < "3.9" and python_version >= "3.8") and extra == "tests-strict"
|
|
206
|
+
Requires-Dist: coverage==6.1.1; (python_version < "3.8" and python_version >= "3.7") and extra == "tests-strict"
|
|
207
|
+
Requires-Dist: coverage==6.1.1; (python_version < "3.7" and python_version >= "3.6") and extra == "tests-strict"
|
|
208
|
+
Provides-Extra: optional-strict
|
|
209
|
+
Requires-Dist: textual==0.1.18; python_version >= "3.7" and extra == "optional-strict"
|
|
210
|
+
Requires-Dist: pint==0.24.4; (python_version < "4.0" and python_version >= "3.13") and extra == "optional-strict"
|
|
211
|
+
Requires-Dist: pint==0.23; (python_version < "3.13" and python_version >= "3.12") and extra == "optional-strict"
|
|
212
|
+
Requires-Dist: pint==0.18; (python_version < "3.12" and python_version >= "3.11") and extra == "optional-strict"
|
|
213
|
+
Requires-Dist: pint==0.18; (python_version < "3.11" and python_version >= "3.10") and extra == "optional-strict"
|
|
214
|
+
Requires-Dist: pint==0.18; (python_version < "3.10" and python_version >= "3.9") and extra == "optional-strict"
|
|
215
|
+
Requires-Dist: pint==0.18; (python_version < "3.9" and python_version >= "3.8") and extra == "optional-strict"
|
|
216
|
+
Provides-Extra: docs-strict
|
|
217
|
+
Requires-Dist: sphinx==5.0.1; extra == "docs-strict"
|
|
218
|
+
Requires-Dist: sphinx-autobuild==2021.3.14; extra == "docs-strict"
|
|
219
|
+
Requires-Dist: sphinx_rtd_theme==1.0.0; extra == "docs-strict"
|
|
220
|
+
Requires-Dist: sphinxcontrib-napoleon==0.7; extra == "docs-strict"
|
|
221
|
+
Requires-Dist: sphinx-autoapi==1.8.4; extra == "docs-strict"
|
|
222
|
+
Requires-Dist: Pygments==2.9.0; extra == "docs-strict"
|
|
223
|
+
Requires-Dist: myst_parser==0.18.0; extra == "docs-strict"
|
|
224
|
+
Requires-Dist: sphinx-reredirects==0.0.1; extra == "docs-strict"
|
|
225
|
+
Provides-Extra: linting-strict
|
|
226
|
+
Requires-Dist: flake8==5.0.0; extra == "linting-strict"
|
|
227
|
+
Dynamic: author
|
|
228
|
+
Dynamic: author-email
|
|
229
|
+
Dynamic: classifier
|
|
230
|
+
Dynamic: description
|
|
231
|
+
Dynamic: description-content-type
|
|
232
|
+
Dynamic: home-page
|
|
233
|
+
Dynamic: license
|
|
234
|
+
Dynamic: provides-extra
|
|
235
|
+
Dynamic: requires-dist
|
|
236
|
+
Dynamic: requires-python
|
|
237
|
+
Dynamic: summary
|
|
200
238
|
|
|
201
239
|
Command Queue - cmd_queue
|
|
202
240
|
=========================
|