cmd-queue 0.1.19__py3-none-any.whl → 0.2.0__py3-none-any.whl

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Files changed (31) hide show
  1. cmd_queue/__init__.py +1 -1
  2. cmd_queue/__main__.pyi +3 -0
  3. cmd_queue/airflow_queue.pyi +84 -0
  4. cmd_queue/base_queue.py +5 -0
  5. cmd_queue/base_queue.pyi +86 -0
  6. cmd_queue/cli_boilerplate.pyi +32 -0
  7. cmd_queue/main.py +4 -1
  8. cmd_queue/main.pyi +66 -0
  9. cmd_queue/monitor_app.pyi +41 -0
  10. cmd_queue/py.typed +0 -0
  11. cmd_queue/serial_queue.pyi +124 -0
  12. cmd_queue/slurm_queue.py +37 -8
  13. cmd_queue/slurm_queue.pyi +97 -0
  14. cmd_queue/tmux_queue.py +20 -0
  15. cmd_queue/tmux_queue.pyi +93 -0
  16. cmd_queue/util/richer.pyi +14 -0
  17. cmd_queue/util/texter.pyi +14 -0
  18. cmd_queue/util/textual_extensions.pyi +62 -0
  19. cmd_queue/util/util_algo.pyi +7 -0
  20. cmd_queue/util/util_network_text.pyi +89 -0
  21. cmd_queue/util/util_networkx.pyi +7 -0
  22. cmd_queue/util/util_tags.pyi +8 -0
  23. cmd_queue/util/util_tmux.pyi +13 -0
  24. cmd_queue/util/util_yaml.pyi +43 -0
  25. {cmd_queue-0.1.19.dist-info → cmd_queue-0.2.0.dist-info}/METADATA +247 -183
  26. cmd_queue-0.2.0.dist-info/RECORD +45 -0
  27. {cmd_queue-0.1.19.dist-info → cmd_queue-0.2.0.dist-info}/WHEEL +1 -1
  28. {cmd_queue-0.1.19.dist-info → cmd_queue-0.2.0.dist-info}/entry_points.txt +0 -1
  29. cmd_queue-0.1.19.dist-info/RECORD +0 -26
  30. {cmd_queue-0.1.19.dist-info → cmd_queue-0.2.0.dist-info}/LICENSE +0 -0
  31. {cmd_queue-0.1.19.dist-info → cmd_queue-0.2.0.dist-info}/top_level.txt +0 -0
{cmd_queue-0.1.19.dist-info → cmd_queue-0.2.0.dist-info}/METADATA RENAMED
@@ -1,203 +1,202 @@
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  Metadata-Version: 2.1
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- Name: cmd-queue
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- Version: 0.1.19
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+ Name: cmd_queue
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+ Version: 0.2.0
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  Summary: The cmd_queue module for a DAG of bash commands
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  Home-page: https://gitlab.kitware.com/computer-vision/cmd_queue
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  Author: Kitware Inc., Jon Crall
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  Author-email: kitware@kitware.com, jon.crall@kitware.com
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  License: Apache 2
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- Platform: UNKNOWN
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  Classifier: Development Status :: 4 - Beta
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  Classifier: Intended Audience :: Developers
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  Classifier: Topic :: Software Development :: Libraries :: Python Modules
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  Classifier: Topic :: Utilities
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  Classifier: License :: OSI Approved :: Apache Software License
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- Classifier: Programming Language :: Python :: 3.6
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- Classifier: Programming Language :: Python :: 3.7
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  Classifier: Programming Language :: Python :: 3.8
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  Classifier: Programming Language :: Python :: 3.9
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  Classifier: Programming Language :: Python :: 3.10
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  Classifier: Programming Language :: Python :: 3.11
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  Classifier: Programming Language :: Python :: 3.12
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  Description-Content-Type: text/x-rst
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  License-File: LICENSE
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+ Requires-Dist: pytest-cov >=3.0.0 ; (python_version >= "3.6.0") and extra == 'all'
105
+ Requires-Dist: pytest >=7.1.0 ; (python_version >= "3.7") and extra == 'all'
106
+ Requires-Dist: textual >=0.1.18 ; (python_version >= "3.7") and extra == 'all'
107
+ Requires-Dist: pint >=0.18 ; (python_version >= "3.7") and extra == 'all'
113
108
  Provides-Extra: docs
114
- Requires-Dist: sphinx (>=5.0.1) ; extra == 'docs'
115
- Requires-Dist: sphinx-autobuild (>=2021.3.14) ; extra == 'docs'
116
- Requires-Dist: sphinx-rtd-theme (>=1.0.0) ; extra == 'docs'
117
- Requires-Dist: sphinxcontrib-napoleon (>=0.7) ; extra == 'docs'
118
- Requires-Dist: sphinx-autoapi (>=1.8.4) ; extra == 'docs'
119
- Requires-Dist: Pygments (>=2.9.0) ; extra == 'docs'
120
- Requires-Dist: myst-parser (>=0.18.0) ; extra == 'docs'
121
- Requires-Dist: sphinx-reredirects (>=0.0.1) ; extra == 'docs'
109
+ Requires-Dist: sphinx >=5.0.1 ; extra == 'docs'
110
+ Requires-Dist: sphinx-autobuild >=2021.3.14 ; extra == 'docs'
111
+ Requires-Dist: sphinx-rtd-theme >=1.0.0 ; extra == 'docs'
112
+ Requires-Dist: sphinxcontrib-napoleon >=0.7 ; extra == 'docs'
113
+ Requires-Dist: sphinx-autoapi >=1.8.4 ; extra == 'docs'
114
+ Requires-Dist: Pygments >=2.9.0 ; extra == 'docs'
115
+ Requires-Dist: myst-parser >=0.18.0 ; extra == 'docs'
116
+ Requires-Dist: sphinx-reredirects >=0.0.1 ; extra == 'docs'
122
117
  Provides-Extra: docs-strict
123
- Requires-Dist: sphinx (==5.0.1) ; extra == 'docs-strict'
124
- Requires-Dist: sphinx-autobuild (==2021.3.14) ; extra == 'docs-strict'
125
- Requires-Dist: sphinx-rtd-theme (==1.0.0) ; extra == 'docs-strict'
126
- Requires-Dist: sphinxcontrib-napoleon (==0.7) ; extra == 'docs-strict'
127
- Requires-Dist: sphinx-autoapi (==1.8.4) ; extra == 'docs-strict'
128
- Requires-Dist: Pygments (==2.9.0) ; extra == 'docs-strict'
129
- Requires-Dist: myst-parser (==0.18.0) ; extra == 'docs-strict'
130
- Requires-Dist: sphinx-reredirects (==0.0.1) ; extra == 'docs-strict'
118
+ Requires-Dist: sphinx ==5.0.1 ; extra == 'docs-strict'
119
+ Requires-Dist: sphinx-autobuild ==2021.3.14 ; extra == 'docs-strict'
120
+ Requires-Dist: sphinx-rtd-theme ==1.0.0 ; extra == 'docs-strict'
121
+ Requires-Dist: sphinxcontrib-napoleon ==0.7 ; extra == 'docs-strict'
122
+ Requires-Dist: sphinx-autoapi ==1.8.4 ; extra == 'docs-strict'
123
+ Requires-Dist: Pygments ==2.9.0 ; extra == 'docs-strict'
124
+ Requires-Dist: myst-parser ==0.18.0 ; extra == 'docs-strict'
125
+ Requires-Dist: sphinx-reredirects ==0.0.1 ; extra == 'docs-strict'
126
+ Provides-Extra: linting
127
+ Requires-Dist: flake8 >=5.0.0 ; extra == 'linting'
128
+ Provides-Extra: linting-strict
129
+ Requires-Dist: flake8 ==5.0.0 ; extra == 'linting-strict'
131
130
  Provides-Extra: optional
132
131
  Provides-Extra: optional-strict
133
- Requires-Dist: textual (==0.1.18) ; (python_version >= "3.7") and extra == 'optional-strict'
134
- Requires-Dist: textual (>=0.1.18) ; (python_version >= "3.7") and extra == 'optional'
132
+ Requires-Dist: pint ==0.10 ; (python_version < "3.7" and python_version >= "3.6") and extra == 'optional-strict'
133
+ Requires-Dist: textual ==0.1.18 ; (python_version >= "3.7") and extra == 'optional-strict'
134
+ Requires-Dist: pint ==0.18 ; (python_version >= "3.7") and extra == 'optional-strict'
135
+ Requires-Dist: pint >=0.10 ; (python_version < "3.7" and python_version >= "3.6") and extra == 'optional'
136
+ Requires-Dist: textual >=0.1.18 ; (python_version >= "3.7") and extra == 'optional'
137
+ Requires-Dist: pint >=0.18 ; (python_version >= "3.7") and extra == 'optional'
135
138
  Provides-Extra: runtime
136
- Requires-Dist: ubelt (>=1.3.0) ; extra == 'runtime'
137
- Requires-Dist: rich (>=12.5.1) ; extra == 'runtime'
138
- Requires-Dist: scriptconfig (>=0.7.9) ; extra == 'runtime'
139
- Requires-Dist: psutil (>=5.9.1) ; extra == 'runtime'
140
- Requires-Dist: ruamel.yaml (>=0.17.22) ; extra == 'runtime'
139
+ Requires-Dist: ubelt >=1.3.0 ; extra == 'runtime'
140
+ Requires-Dist: rich >=12.5.1 ; extra == 'runtime'
141
+ Requires-Dist: scriptconfig >=0.7.9 ; extra == 'runtime'
142
+ Requires-Dist: psutil >=5.9.1 ; extra == 'runtime'
143
+ Requires-Dist: ruamel.yaml >=0.17.22 ; extra == 'runtime'
141
144
  Provides-Extra: runtime-strict
142
- Requires-Dist: ubelt (==1.3.0) ; extra == 'runtime-strict'
143
- Requires-Dist: rich (==12.5.1) ; extra == 'runtime-strict'
144
- Requires-Dist: scriptconfig (==0.7.9) ; extra == 'runtime-strict'
145
- Requires-Dist: psutil (==5.9.1) ; extra == 'runtime-strict'
146
- Requires-Dist: ruamel.yaml (==0.17.22) ; extra == 'runtime-strict'
147
- Requires-Dist: numpy (==1.19.3) ; (python_version < "3.10" and python_version >= "3.6.0") and extra == 'runtime-strict'
148
- Requires-Dist: pandas (==1.4.0) ; (python_version < "3.10" and python_version >= "3.9") and extra == 'runtime-strict'
149
- Requires-Dist: numpy (==1.21.6) ; (python_version < "3.11" and python_version >= "3.10") and extra == 'runtime-strict'
150
- Requires-Dist: pandas (==1.4.0) ; (python_version < "3.11" and python_version >= "3.10") and extra == 'runtime-strict'
151
- Requires-Dist: networkx (==2.7) ; (python_version < "3.11" and python_version >= "3.8") and extra == 'runtime-strict'
152
- Requires-Dist: numpy (==1.23.2) ; (python_version < "3.12" and python_version >= "3.11") and extra == 'runtime-strict'
153
- Requires-Dist: pandas (==1.5.0) ; (python_version < "3.12" and python_version >= "3.11") and extra == 'runtime-strict'
154
- Requires-Dist: pandas (==1.1.5) ; (python_version < "3.7" and python_version >= "3.6") and extra == 'runtime-strict'
155
- Requires-Dist: pint (==0.10) ; (python_version < "3.7" and python_version >= "3.6") and extra == 'runtime-strict'
156
- Requires-Dist: networkx (<=2.5.1,==2.5.1) ; (python_version < "3.7.0" and python_version >= "3.6.0") and extra == 'runtime-strict'
157
- Requires-Dist: networkx (==2.6.2) ; (python_version < "3.8" and python_version >= "3.7") and extra == 'runtime-strict'
158
- Requires-Dist: pandas (==1.3.5) ; (python_version < "3.8" and python_version >= "3.7") and extra == 'runtime-strict'
159
- Requires-Dist: pandas (==1.4.0) ; (python_version < "3.9" and python_version >= "3.8") and extra == 'runtime-strict'
160
- Requires-Dist: networkx (==2.8) ; (python_version < "4.0" and python_version >= "3.11") and extra == 'runtime-strict'
161
- Requires-Dist: numpy (==1.26.0) ; (python_version < "4.0" and python_version >= "3.12") and extra == 'runtime-strict'
162
- Requires-Dist: pandas (==2.1.1) ; (python_version < "4.0" and python_version >= "3.12") and extra == 'runtime-strict'
163
- Requires-Dist: pint (==0.18) ; (python_version >= "3.7") and extra == 'runtime-strict'
164
- Requires-Dist: numpy (>=1.19.3) ; (python_version < "3.10" and python_version >= "3.6.0") and extra == 'runtime'
165
- Requires-Dist: pandas (>=1.4.0) ; (python_version < "3.10" and python_version >= "3.9") and extra == 'runtime'
166
- Requires-Dist: numpy (>=1.21.6) ; (python_version < "3.11" and python_version >= "3.10") and extra == 'runtime'
167
- Requires-Dist: pandas (>=1.4.0) ; (python_version < "3.11" and python_version >= "3.10") and extra == 'runtime'
168
- Requires-Dist: networkx (>=2.7) ; (python_version < "3.11" and python_version >= "3.8") and extra == 'runtime'
169
- Requires-Dist: numpy (>=1.23.2) ; (python_version < "3.12" and python_version >= "3.11") and extra == 'runtime'
170
- Requires-Dist: pandas (>=1.5.0) ; (python_version < "3.12" and python_version >= "3.11") and extra == 'runtime'
171
- Requires-Dist: pandas (>=1.1.5) ; (python_version < "3.7" and python_version >= "3.6") and extra == 'runtime'
172
- Requires-Dist: pint (>=0.10) ; (python_version < "3.7" and python_version >= "3.6") and extra == 'runtime'
173
- Requires-Dist: networkx (<=2.5.1,>=2.5.1) ; (python_version < "3.7.0" and python_version >= "3.6.0") and extra == 'runtime'
174
- Requires-Dist: networkx (>=2.6.2) ; (python_version < "3.8" and python_version >= "3.7") and extra == 'runtime'
175
- Requires-Dist: pandas (>=1.3.5) ; (python_version < "3.8" and python_version >= "3.7") and extra == 'runtime'
176
- Requires-Dist: pandas (>=1.4.0) ; (python_version < "3.9" and python_version >= "3.8") and extra == 'runtime'
177
- Requires-Dist: networkx (>=2.8) ; (python_version < "4.0" and python_version >= "3.11") and extra == 'runtime'
178
- Requires-Dist: numpy (>=1.26.0) ; (python_version < "4.0" and python_version >= "3.12") and extra == 'runtime'
179
- Requires-Dist: pandas (>=2.1.1) ; (python_version < "4.0" and python_version >= "3.12") and extra == 'runtime'
180
- Requires-Dist: pint (>=0.18) ; (python_version >= "3.7") and extra == 'runtime'
145
+ Requires-Dist: ubelt ==1.3.0 ; extra == 'runtime-strict'
146
+ Requires-Dist: rich ==12.5.1 ; extra == 'runtime-strict'
147
+ Requires-Dist: scriptconfig ==0.7.9 ; extra == 'runtime-strict'
148
+ Requires-Dist: psutil ==5.9.1 ; extra == 'runtime-strict'
149
+ Requires-Dist: ruamel.yaml ==0.17.22 ; extra == 'runtime-strict'
150
+ Requires-Dist: numpy ==1.19.3 ; (python_version < "3.10" and python_version >= "3.6.0") and extra == 'runtime-strict'
151
+ Requires-Dist: pandas ==1.4.0 ; (python_version < "3.10" and python_version >= "3.9") and extra == 'runtime-strict'
152
+ Requires-Dist: numpy ==1.21.6 ; (python_version < "3.11" and python_version >= "3.10") and extra == 'runtime-strict'
153
+ Requires-Dist: pandas ==1.4.0 ; (python_version < "3.11" and python_version >= "3.10") and extra == 'runtime-strict'
154
+ Requires-Dist: networkx ==2.7 ; (python_version < "3.11" and python_version >= "3.8") and extra == 'runtime-strict'
155
+ Requires-Dist: numpy ==1.23.2 ; (python_version < "3.12" and python_version >= "3.11") and extra == 'runtime-strict'
156
+ Requires-Dist: pandas ==1.5.0 ; (python_version < "3.12" and python_version >= "3.11") and extra == 'runtime-strict'
157
+ Requires-Dist: pandas ==1.1.5 ; (python_version < "3.7" and python_version >= "3.6") and extra == 'runtime-strict'
158
+ Requires-Dist: networkx <=2.5.1,==2.5.1 ; (python_version < "3.7.0" and python_version >= "3.6.0") and extra == 'runtime-strict'
159
+ Requires-Dist: networkx ==2.6.2 ; (python_version < "3.8" and python_version >= "3.7") and extra == 'runtime-strict'
160
+ Requires-Dist: pandas ==1.3.5 ; (python_version < "3.8" and python_version >= "3.7") and extra == 'runtime-strict'
161
+ Requires-Dist: pandas ==1.4.0 ; (python_version < "3.9" and python_version >= "3.8") and extra == 'runtime-strict'
162
+ Requires-Dist: networkx ==2.8 ; (python_version < "4.0" and python_version >= "3.11") and extra == 'runtime-strict'
163
+ Requires-Dist: numpy ==1.26.0 ; (python_version < "4.0" and python_version >= "3.12") and extra == 'runtime-strict'
164
+ Requires-Dist: pandas ==2.1.1 ; (python_version < "4.0" and python_version >= "3.12") and extra == 'runtime-strict'
165
+ Requires-Dist: numpy >=1.19.3 ; (python_version < "3.10" and python_version >= "3.6.0") and extra == 'runtime'
166
+ Requires-Dist: pandas >=1.4.0 ; (python_version < "3.10" and python_version >= "3.9") and extra == 'runtime'
167
+ Requires-Dist: numpy >=1.21.6 ; (python_version < "3.11" and python_version >= "3.10") and extra == 'runtime'
168
+ Requires-Dist: pandas >=1.4.0 ; (python_version < "3.11" and python_version >= "3.10") and extra == 'runtime'
169
+ Requires-Dist: networkx >=2.7 ; (python_version < "3.11" and python_version >= "3.8") and extra == 'runtime'
170
+ Requires-Dist: numpy >=1.23.2 ; (python_version < "3.12" and python_version >= "3.11") and extra == 'runtime'
171
+ Requires-Dist: pandas >=1.5.0 ; (python_version < "3.12" and python_version >= "3.11") and extra == 'runtime'
172
+ Requires-Dist: pandas >=1.1.5 ; (python_version < "3.7" and python_version >= "3.6") and extra == 'runtime'
173
+ Requires-Dist: networkx <=2.5.1,>=2.5.1 ; (python_version < "3.7.0" and python_version >= "3.6.0") and extra == 'runtime'
174
+ Requires-Dist: networkx >=2.6.2 ; (python_version < "3.8" and python_version >= "3.7") and extra == 'runtime'
175
+ Requires-Dist: pandas >=1.3.5 ; (python_version < "3.8" and python_version >= "3.7") and extra == 'runtime'
176
+ Requires-Dist: pandas >=1.4.0 ; (python_version < "3.9" and python_version >= "3.8") and extra == 'runtime'
177
+ Requires-Dist: networkx >=2.8 ; (python_version < "4.0" and python_version >= "3.11") and extra == 'runtime'
178
+ Requires-Dist: numpy >=1.26.0 ; (python_version < "4.0" and python_version >= "3.12") and extra == 'runtime'
179
+ Requires-Dist: pandas >=2.1.1 ; (python_version < "4.0" and python_version >= "3.12") and extra == 'runtime'
181
180
  Provides-Extra: tests
182
- Requires-Dist: xdoctest (>=1.0.1) ; extra == 'tests'
181
+ Requires-Dist: xdoctest >=1.0.1 ; extra == 'tests'
183
182
  Provides-Extra: tests-strict
184
- Requires-Dist: xdoctest (==1.0.1) ; extra == 'tests-strict'
185
- Requires-Dist: coverage (==5.3.1) ; (python_version < "3.10" and python_version >= "3.9") and extra == 'tests-strict'
186
- Requires-Dist: pytest (==6.2.0) ; (python_version < "3.7" and python_version >= "3.6") and extra == 'tests-strict'
187
- Requires-Dist: coverage (==6.1.1) ; (python_version < "3.7" and python_version >= "3.6") and extra == 'tests-strict'
188
- Requires-Dist: coverage (==6.1.1) ; (python_version < "3.8" and python_version >= "3.7") and extra == 'tests-strict'
189
- Requires-Dist: coverage (==6.1.1) ; (python_version < "3.9" and python_version >= "3.8") and extra == 'tests-strict'
190
- Requires-Dist: coverage (==6.1.1) ; (python_version >= "3.10") and extra == 'tests-strict'
191
- Requires-Dist: pytest-cov (==3.0.0) ; (python_version >= "3.6.0") and extra == 'tests-strict'
192
- Requires-Dist: pytest (==7.1.0) ; (python_version >= "3.7") and extra == 'tests-strict'
193
- Requires-Dist: coverage (>=5.3.1) ; (python_version < "3.10" and python_version >= "3.9") and extra == 'tests'
194
- Requires-Dist: pytest (>=6.2.0) ; (python_version < "3.7" and python_version >= "3.6") and extra == 'tests'
195
- Requires-Dist: coverage (>=6.1.1) ; (python_version < "3.7" and python_version >= "3.6") and extra == 'tests'
196
- Requires-Dist: coverage (>=6.1.1) ; (python_version < "3.8" and python_version >= "3.7") and extra == 'tests'
197
- Requires-Dist: coverage (>=6.1.1) ; (python_version < "3.9" and python_version >= "3.8") and extra == 'tests'
198
- Requires-Dist: coverage (>=6.1.1) ; (python_version >= "3.10") and extra == 'tests'
199
- Requires-Dist: pytest-cov (>=3.0.0) ; (python_version >= "3.6.0") and extra == 'tests'
200
- Requires-Dist: pytest (>=7.1.0) ; (python_version >= "3.7") and extra == 'tests'
183
+ Requires-Dist: xdoctest ==1.0.1 ; extra == 'tests-strict'
184
+ Requires-Dist: coverage ==5.3.1 ; (python_version < "3.10" and python_version >= "3.9") and extra == 'tests-strict'
185
+ Requires-Dist: pytest ==6.2.0 ; (python_version < "3.7" and python_version >= "3.6") and extra == 'tests-strict'
186
+ Requires-Dist: coverage ==6.1.1 ; (python_version < "3.7" and python_version >= "3.6") and extra == 'tests-strict'
187
+ Requires-Dist: coverage ==6.1.1 ; (python_version < "3.8" and python_version >= "3.7") and extra == 'tests-strict'
188
+ Requires-Dist: coverage ==6.1.1 ; (python_version < "3.9" and python_version >= "3.8") and extra == 'tests-strict'
189
+ Requires-Dist: coverage ==6.1.1 ; (python_version >= "3.10") and extra == 'tests-strict'
190
+ Requires-Dist: pytest-cov ==3.0.0 ; (python_version >= "3.6.0") and extra == 'tests-strict'
191
+ Requires-Dist: pytest ==7.1.0 ; (python_version >= "3.7") and extra == 'tests-strict'
192
+ Requires-Dist: coverage >=5.3.1 ; (python_version < "3.10" and python_version >= "3.9") and extra == 'tests'
193
+ Requires-Dist: pytest >=6.2.0 ; (python_version < "3.7" and python_version >= "3.6") and extra == 'tests'
194
+ Requires-Dist: coverage >=6.1.1 ; (python_version < "3.7" and python_version >= "3.6") and extra == 'tests'
195
+ Requires-Dist: coverage >=6.1.1 ; (python_version < "3.8" and python_version >= "3.7") and extra == 'tests'
196
+ Requires-Dist: coverage >=6.1.1 ; (python_version < "3.9" and python_version >= "3.8") and extra == 'tests'
197
+ Requires-Dist: coverage >=6.1.1 ; (python_version >= "3.10") and extra == 'tests'
198
+ Requires-Dist: pytest-cov >=3.0.0 ; (python_version >= "3.6.0") and extra == 'tests'
199
+ Requires-Dist: pytest >=7.1.0 ; (python_version >= "3.7") and extra == 'tests'
201
200
 
202
201
  Command Queue - cmd_queue
203
202
  =========================
@@ -391,6 +390,73 @@ that you define in Python.
391
390
  We plan on adding an airflow backend.
392
391
 
393
392
 
393
+ Usage
394
+ =====
395
+
396
+
397
+ There are two ways to use ``cmd_queue``:
398
+
399
+ 1. In Python create a Queue object, and then call the .submit method to pass it
400
+ a shell invocation. It returns an object that you can use to specify
401
+ dependencies of any further calls to .submit. This simply organizes all of
402
+ your CLI invocations into a bash script, which can be inspected and then
403
+ run. There are different backends that enable parallel execution of jobs
404
+ when dependencies allow.
405
+
406
+ 2. There is a way to use it via the CLI, with details shown in cmd_queue
407
+ --help. Usage is basically the same. You create a queue, submit jobs to it,
408
+ you can inspect it, and you can run it.
409
+
410
+
411
+ Example usage in Python:
412
+
413
+ .. code:: python
414
+
415
+ import cmd_queue
416
+
417
+ # Create a Queue object
418
+ self = cmd_queue.Queue.create(name='demo_queue', backend='serial')
419
+
420
+ # Submit bash invocations that you want to run, and mark dependencies.
421
+ job1 = self.submit('echo hello')
422
+ job2 = self.submit('echo world', depends=[job1])
423
+ job3 = self.submit('echo foo')
424
+ job4 = self.submit('echo bar', depends=[job2, job3])
425
+ job5 = self.submit('echo spam', depends=[job1])
426
+
427
+ # Print a graph of job dependencies
428
+ self.print_graph()
429
+
430
+ # Display the simplified bash script to be executed.
431
+ self.print_commands()
432
+
433
+ # Execute the jobs
434
+ self.run()
435
+
436
+
437
+ Example usage in the CLI:
438
+
439
+ .. code:: bash
440
+
441
+ # Create a Queue
442
+ cmd_queue new "demo_cli_queue"
443
+
444
+ # Submit bash invocations that you want to run, and mark dependencies.
445
+ cmd_queue submit --jobname job1 "demo_cli_queue" -- echo hello
446
+ cmd_queue submit --jobname job2 --depends job1 "demo_cli_queue" -- echo world
447
+ cmd_queue submit --jobname job3 "demo_cli_queue" -- echo foo
448
+ cmd_queue submit --jobname job4 --depends job1,job2 "demo_cli_queue" -- echo bar
449
+ cmd_queue submit --jobname job5 --depends job1 "demo_cli_queue" -- echo spam
450
+
451
+ # Display the simplified bash script to be executed.
452
+ cmd_queue show "demo_cli_queue" --backend=serial
453
+
454
+ # Execute the jobs
455
+ cmd_queue run "demo_cli_queue" --backend=serial
456
+
457
+
458
+
459
+
394
460
  Examples
395
461
  ========
396
462
 
@@ -403,7 +469,11 @@ use cmd_queue to "transpile" these sequences of commands to pure bash.
403
469
  .. code:: python
404
470
 
405
471
  import cmd_queue
472
+
473
+ # Create a Queue object
406
474
  self = cmd_queue.Queue.create(name='demo_queue', backend='serial')
475
+
476
+ # Submit bash invocations that you want to run, and mark dependencies.
407
477
  job1 = self.submit('echo hello && sleep 0.5')
408
478
  job2 = self.submit('echo world && sleep 0.5', depends=[job1])
409
479
  job3 = self.submit('echo foo && sleep 0.5')
@@ -415,17 +485,11 @@ use cmd_queue to "transpile" these sequences of commands to pure bash.
415
485
  job9 = self.submit('echo eggs && sleep 0.5', depends=[job8])
416
486
  job10 = self.submit('echo bazbiz && sleep 0.5', depends=[job9])
417
487
 
418
- # Display the "user-friendly" pure bash
488
+ # Display the simplified bash script to be executed.
419
489
  self.print_commands()
420
490
 
421
- # Display the real bash that gets executed under the hood
422
- # that is independencly executable, tracks the success / failure of each job,
423
- # and manages dependencies.
424
- self.print_commands(1, 1)
425
-
426
- # Blocking will display a job monitor while it waits for everything to
427
- # complete
428
- self.run(block=True)
491
+ # Execute the jobs
492
+ self.run()
429
493
 
430
494
 
431
495
  This prints the bash commands in an appropriate order to resolve dependencies.
@@ -470,6 +534,8 @@ This prints the bash commands in an appropriate order to resolve dependencies.
470
534
  echo bazbiz && sleep 0.5
471
535
 
472
536
 
537
+ The same code can be run in parallel by chosing a more powerful backend.
538
+ The tmux backend is the lightest weight parallel backend.
473
539
 
474
540
  .. code:: python
475
541
 
@@ -651,5 +717,3 @@ This prints the very simple slurm submission script:
651
717
 
652
718
  .. |Codecov| image:: https://codecov.io/github/Erotemic/cmd_queue/badge.svg?branch=main&service=github
653
719
  :target: https://codecov.io/github/Erotemic/cmd_queue?branch=main
654
-
655
-
cmd_queue-0.2.0.dist-info/RECORD ADDED
@@ -0,0 +1,45 @@
1
+ cmd_queue/__init__.py,sha256=_aGdqmuT1Evxgec-s9ANpdQI3_wKiBhPBSsH3Umvcqo,14898
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+ cmd_queue/cli_boilerplate.py,sha256=fieFDUkzabrEYNkFzfta1LdKzIaCRjRqnA9sEpmS9zk,10117
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+ cmd_queue/cli_boilerplate.pyi,sha256=7aLV5F7s7esFa_pnXFmNmWQdeJfNWdN1lTE4kAMnj4M,742
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+ cmd_queue/main.py,sha256=CTv43Dc_19wAWdqmZ3qesHm492jg4Se25XJajpzg2HE,14309
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+ cmd_queue/main.pyi,sha256=QK2dH-nvCsPSSEDNKlO4Uld6rBHsAIswXrkMd6JK2JU,1199
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+ cmd_queue/monitor_app.py,sha256=m0cROUkBvTfpArjdZBfDvBMYnVJKBU_gDiW4HqENm0o,4641
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+ cmd_queue/monitor_app.pyi,sha256=iMjOCX4djY-3F5GMlMcYBavm4aKYHz6RZJbsUrh43Po,860
14
+ cmd_queue/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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+ cmd_queue/serial_queue.py,sha256=IEqoUNdye9jL9QLkBTYiDrgTA_kM86vhZao3zrqUFdw,27101
16
+ cmd_queue/serial_queue.pyi,sha256=puYmRndz0-z8TzGKYrDS3fHs6OMuZT7wbHDv3NKKngU,3163
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+ cmd_queue/slurm_queue.py,sha256=R-i9Pf_wyPvesJi3U8yJF2coV8bWkEq-hoprp-ab94E,24634
18
+ cmd_queue/slurm_queue.pyi,sha256=z67qF4_IncO3YyuPIutk8-xzhQ2zOY_-IvYix0OWqJs,2174
19
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20
+ cmd_queue/tmux_queue.pyi,sha256=bBxxQKKVIDGXLmb2O9eHX37lXrJuo4BSePbTDmaEiNc,1992
21
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22
+ cmd_queue/util/richer.py,sha256=OPXpoXYgdhv_49sskF9FMwj6KCSiNcBo1kNhbuj6hoU,3373
23
+ cmd_queue/util/richer.pyi,sha256=CNEJLC19vxEwR9TZ5oUE30A9A6OkCD-G4ovNk60kvdw,167
24
+ cmd_queue/util/texter.py,sha256=I6Fcrk0Yp3QTgbxF8cn8vSZWIkkytGBk3ZD4c1diMM0,2264
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+ cmd_queue/util/texter.pyi,sha256=CNEJLC19vxEwR9TZ5oUE30A9A6OkCD-G4ovNk60kvdw,167
26
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27
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28
+ cmd_queue/util/util_algo.py,sha256=NSHXhNz0YThlks0Ku4Dki3NPCfw3SP-yI-Ul6wd3z30,1663
29
+ cmd_queue/util/util_algo.pyi,sha256=xO8R3oHigzSeFEdbMMbpj3tslQPxLPtkN2yDmTFGwnI,175
30
+ cmd_queue/util/util_network_text.py,sha256=bLJYY98qEKOngvPWA6SlBfkgOdHltuHWDHLdW0PD5CE,32127
31
+ cmd_queue/util/util_network_text.pyi,sha256=OVOZUtNePgktdpQVEvfritQ4IFimmi5rlgTQ9WkT5UA,1862
32
+ cmd_queue/util/util_networkx.py,sha256=wW1ZKZDy79zfOV76f9fbewY9Zjeb8YCqXKKeaeBld1g,1475
33
+ cmd_queue/util/util_networkx.pyi,sha256=qUjZx421kO3lEQoP5sR3bk35-yOVDaszvVszpb8xsmg,120
34
+ cmd_queue/util/util_tags.py,sha256=Hlxpel759AduUy3Wdq3fCe-XKjxqBUFCLOr3Mw2bzsw,719
35
+ cmd_queue/util/util_tags.pyi,sha256=RXg8yJFvgFCNL7Sbu8Cfxrmg855G4w6badAhhWAc4HQ,123
36
+ cmd_queue/util/util_tmux.py,sha256=vC4xeYZCV8uVAp363zD24ROyKqUAdCynIULNJ8UgLQE,1078
37
+ cmd_queue/util/util_tmux.pyi,sha256=a4XMkzhPntU4MTpeHteZIvOpP0FQt7Qym-tueHojSnQ,246
38
+ cmd_queue/util/util_yaml.py,sha256=5BAuP_fyucB0LrWmXLJLNyXGW7kqbyjJHLlH0zhRiKk,14460
39
+ cmd_queue/util/util_yaml.pyi,sha256=FmbRydo62JgVWtq6oH7ICqVeij8GEpqjEetPiCeO0sE,775
40
+ cmd_queue-0.2.0.dist-info/LICENSE,sha256=o6jcFk_bwjiPUz6vHK0Ju7RwbFp9eXMwAS2BDnwER-4,11343
41
+ cmd_queue-0.2.0.dist-info/METADATA,sha256=sq4dpnCsiiajWf82k-7RIdGtGWWWARiapmD_7eaQ4hE,36034
42
+ cmd_queue-0.2.0.dist-info/WHEEL,sha256=mguMlWGMX-VHnMpKOjjQidIo1ssRlCFu4a4mBpz1s2M,91
43
+ cmd_queue-0.2.0.dist-info/entry_points.txt,sha256=HDxa1dTf0Dne-a-QeDu7cWZVYRyEtCvqaau0GCCMEyw,54
44
+ cmd_queue-0.2.0.dist-info/top_level.txt,sha256=C2JVEsOZsjnMx3jIAWhIQGWAXjGs-hyBzzjkOIm7qW8,10
45
+ cmd_queue-0.2.0.dist-info/RECORD,,
{cmd_queue-0.1.19.dist-info → cmd_queue-0.2.0.dist-info}/WHEEL RENAMED
@@ -1,5 +1,5 @@
1
1
  Wheel-Version: 1.0
2
- Generator: bdist_wheel (0.37.1)
2
+ Generator: setuptools (70.1.1)
3
3
  Root-Is-Purelib: true
4
4
  Tag: py3-none-any
5
5
 
{cmd_queue-0.1.19.dist-info → cmd_queue-0.2.0.dist-info}/entry_points.txt RENAMED
@@ -1,3 +1,2 @@
1
1
  [console_scripts]
2
2
  cmd_queue = cmd_queue.__main__:main
3
-
cmd_queue-0.1.19.dist-info/RECORD DELETED
@@ -1,26 +0,0 @@
1
- cmd_queue/__init__.py,sha256=z8vQrG8k-qIi-UD_oM2fsNhVvCM3T9PQb0Ag6F8uBdQ,14899
2
- cmd_queue/__main__.py,sha256=11Af1e3gd3CeDOj6x-OuHMttQWRvMxiB9xWdgKJeJa0,179
3
- cmd_queue/airflow_queue.py,sha256=aQE6t8im2nzJ1w_U5swBDbDEoJWrC8tUr8oEoJcqFLE,10503
4
- cmd_queue/base_queue.py,sha256=75B7fvgXN6gCZNAw_w57Q0uOOoa7Pyeyx47t9k6FW4A,14391
5
- cmd_queue/cli_boilerplate.py,sha256=fieFDUkzabrEYNkFzfta1LdKzIaCRjRqnA9sEpmS9zk,10117
6
- cmd_queue/main.py,sha256=5WAMFqRcz1sXOBf4bifm8hzlYY8BY32f0SDN7HWB1lk,14133
7
- cmd_queue/monitor_app.py,sha256=m0cROUkBvTfpArjdZBfDvBMYnVJKBU_gDiW4HqENm0o,4641
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- cmd_queue/serial_queue.py,sha256=IEqoUNdye9jL9QLkBTYiDrgTA_kM86vhZao3zrqUFdw,27101
9
- cmd_queue/slurm_queue.py,sha256=OcYi3aroIdMNovTXNBi2ACFIfUGPKG-R6xG9mHQNTNU,23848
10
- cmd_queue/tmux_queue.py,sha256=hzZWQRJ5yJSgh1kcAW6t04Up0qkhFpuZxlzwcTZNbPk,42257
11
- cmd_queue/util/__init__.py,sha256=QzlId47F1lzuLyeIIJoPGZR3b9ljJl50sFEcJzYWrB8,1450
12
- cmd_queue/util/richer.py,sha256=OPXpoXYgdhv_49sskF9FMwj6KCSiNcBo1kNhbuj6hoU,3373
13
- cmd_queue/util/texter.py,sha256=I6Fcrk0Yp3QTgbxF8cn8vSZWIkkytGBk3ZD4c1diMM0,2264
14
- cmd_queue/util/textual_extensions.py,sha256=D2WC9ZpNLRo9tSozLBUISVF2rpPKYhE8x2REr4fIA34,7509
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- cmd_queue/util/util_networkx.py,sha256=wW1ZKZDy79zfOV76f9fbewY9Zjeb8YCqXKKeaeBld1g,1475
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19
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- cmd_queue/util/util_yaml.py,sha256=5BAuP_fyucB0LrWmXLJLNyXGW7kqbyjJHLlH0zhRiKk,14460
21
- cmd_queue-0.1.19.dist-info/LICENSE,sha256=o6jcFk_bwjiPUz6vHK0Ju7RwbFp9eXMwAS2BDnwER-4,11343
22
- cmd_queue-0.1.19.dist-info/METADATA,sha256=WFnipQiN7ijLZh0PYgSFemols5dEkGqORVz-kX_3oe0,34423
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- cmd_queue-0.1.19.dist-info/WHEEL,sha256=G16H4A3IeoQmnOrYV4ueZGKSjhipXx8zc8nu9FGlvMA,92
24
- cmd_queue-0.1.19.dist-info/entry_points.txt,sha256=gyXp4jJ1zhZcrddf0kwEG4HvOurS88ooqRfHBxxoBMU,55
25
- cmd_queue-0.1.19.dist-info/top_level.txt,sha256=C2JVEsOZsjnMx3jIAWhIQGWAXjGs-hyBzzjkOIm7qW8,10
26
- cmd_queue-0.1.19.dist-info/RECORD,,