cloudnetpy 1.61.15__py3-none-any.whl → 1.61.17__py3-none-any.whl

cloudnetpy/plotting/plotting.py

@@ -1,4 +1,5 @@
 """Misc. plotting routines for Cloudnet products."""
+
 import os.path
 import re
 import textwrap
@@ -27,8 +28,7 @@ from cloudnetpy.plotting.plot_meta import ATTRIBUTES, PlotMeta
 
 @dataclass
 class PlotParameters:
-    """
-    Class representing the parameters for plotting.
+    """Class representing the parameters for plotting.
 
     Attributes:
         dpi: The resolution of the plot in dots per inch.
@@ -57,9 +57,8 @@ class PlotParameters:
 
 
 class Dimensions:
-    """
-    Dimensions of a generated figure in pixels. Elements such as the figure
-    title, labels, colorbar and legend are exluded from the margins.
+    """Dimensions of a generated figure in pixels. Elements such as the figure
+    title, labels, colorbar and legend are excluded from the margins.
 
     Attributes:
         width (int): Figure width in pixels.
@@ -121,9 +120,8 @@ class FigureData:
             sharex=True,
         )
         fig.subplots_adjust(left=0.06, right=0.73)
-        if n_subplots == 1:
-            axes = [axes]
-        return fig, axes
+        axes_list = [axes] if isinstance(axes, Axes) else axes.tolist()
+        return fig, axes_list
 
     def add_subtitle(self, fig: Figure) -> None:
         fig.suptitle(
@@ -309,7 +307,7 @@ class Plot:
             "air_pressure": (multiply, 0.01, "hPa"),
             "relative_humidity": (multiply, 100, "%"),
             "rainfall_amount": (multiply, 1000, "mm"),
-            "air_temperature": (add, -273.15, "\u00B0C"),
+            "air_temperature": (add, -273.15, "\u00b0C"),
         }
         conversion_method, conversion, units = units_conversion.get(
             self.sub_plot.variable.name, (multiply, 1, None)
@@ -680,8 +678,16 @@ class Plot1D(Plot):
     def _plot_moving_average(self, figure_data: FigureData) -> None:
         time = figure_data.time.copy()
         data = self._data_orig.copy()
-        data, time = self._get_unmasked_values(data, time)
-        sma = self._calculate_moving_average(data, time, window=5)
+        good_values = ~ma.getmaskarray(data)
+        data = data[good_values]
+        time = time[good_values]
+        if self.sub_plot.variable.name == "wind_direction":
+            wind_speed = figure_data.file["wind_speed"][good_values]
+            sma = self._calculate_average_wind_direction(
+                wind_speed, data, time, window=15
+            )
+        else:
+            sma = self._calculate_moving_average(data, time, window=5)
         gap_time = _get_max_gap_in_minutes(figure_data)
         gaps = self._find_time_gap_indices(time, max_gap_min=gap_time)
         if len(gaps) > 0:
@@ -701,16 +707,6 @@ class Plot1D(Plot):
         line_width = np.median(np.diff(time)) * 1000
         return min(max(line_width, 0.25), 0.9)
 
-    @staticmethod
-    def _get_unmasked_values(
-        data: ma.MaskedArray,
-        time: ndarray,
-    ) -> tuple[ndarray, ndarray]:
-        if not ma.is_masked(data):
-            return data, time
-        good_values = ~data.mask
-        return data[good_values], time[good_values]
-
     @staticmethod
     def _get_bad_zenith_profiles(figure_data: FigureData) -> ndarray:
         zenith_limit = 5
@@ -747,6 +743,24 @@ class Plot1D(Plot):
         edge = window_size // 2
         return np.pad(sma, (edge, edge - 1), mode="constant", constant_values=np.nan)
 
+    @classmethod
+    def _calculate_average_wind_direction(
+        cls,
+        wind_speed: ndarray,
+        wind_direction: ndarray,
+        time: ndarray,
+        window: float = 5,
+    ) -> ndarray:
+        angle = np.deg2rad(wind_direction)
+        u = wind_speed * np.cos(angle)
+        v = wind_speed * np.sin(angle)
+        avg_u = cls._calculate_moving_average(u, time, window)
+        avg_v = cls._calculate_moving_average(v, time, window)
+        data = np.rad2deg(np.arctan2(avg_v, avg_u)) % 360
+        wrap = np.where(np.abs(np.diff(data)) > 300)[0]
+        data[wrap] = np.nan
+        return data
+
 
 def generate_figure(
     filename: os.PathLike | str,
@@ -756,8 +770,7 @@ def generate_figure(
     output_filename: os.PathLike | str | None = None,
     options: PlotParameters | None = None,
 ) -> Dimensions:
-    """
-    Generate a figure based on the given filename and variables.
+    """Generate a figure based on the given filename and variables.
 
     Args:
         filename: The path to the input file.

cloudnetpy/products/classification.py

@@ -1,4 +1,5 @@
 """Module for creating classification file."""
+
 import numpy as np
 from numpy import ma
 
@@ -70,20 +71,20 @@ def _get_target_classification(
     classification = ma.zeros(bits["cold"].shape, dtype=int)
     classification[bits["droplet"] & ~bits["falling"]] = 1  # Cloud droplets
     classification[~bits["droplet"] & bits["falling"]] = 2  # Drizzle or rain
-    classification[
-        bits["droplet"] & bits["falling"]
-    ] = 3  # Drizzle or rain and droplets
+    classification[bits["droplet"] & bits["falling"]] = (
+        3  # Drizzle or rain and droplets
+    )
     classification[~bits["droplet"] & bits["falling"] & bits["cold"]] = 4  # ice
-    classification[
-        bits["droplet"] & bits["falling"] & bits["cold"]
-    ] = 5  # ice + supercooled
+    classification[bits["droplet"] & bits["falling"] & bits["cold"]] = (
+        5  # ice + supercooled
+    )
     classification[bits["melting"]] = 6  # melting layer
     classification[bits["melting"] & bits["droplet"]] = 7  # melting + droplets
     classification[bits["aerosol"]] = 8  # aerosols
     classification[bits["insect"] & ~clutter] = 9  # insects
-    classification[
-        bits["aerosol"] & bits["insect"] & ~clutter
-    ] = 10  # insects + aerosols
+    classification[bits["aerosol"] & bits["insect"] & ~clutter] = (
+        10  # insects + aerosols
+    )
     classification[clutter & ~bits["aerosol"]] = 0
     return classification
 

cloudnetpy/products/der.py

@@ -1,6 +1,7 @@
 """Module for creating Cloudnet droplet effective radius
 using the Frisch et al. 2002 method.
 """
+
 from typing import NamedTuple
 
 import numpy as np
@@ -33,7 +34,7 @@ def generate_der(
     parameters: Parameters | None = None,
 ) -> str:
     """Generates Cloudnet effective radius of liquid water droplets
-        product acording to Frisch et al. 2002.
+        product according to Frisch et al. 2002.
 
     This function calculates liquid droplet effective radius def
     using the Frisch method. In this method, def is calculated
@@ -44,7 +45,7 @@ def generate_der(
         categorize_file: Categorize file name.
         output_file: Output file name.
         uuid: Set specific UUID for the file.
-        parameters: Tuple of specific fixed paramaters
+        parameters: Tuple of specific fixed parameters
             (ddBZ, N, dN, sigma_x, dsigma_x, dQ)
         used in Frisch approach.
 

cloudnetpy/products/drizzle.py

@@ -1,5 +1,5 @@
-"""Module for creating Cloudnet drizzle product.
-"""
+"""Module for creating Cloudnet drizzle product."""
+
 import numpy as np
 from numpy import ma
 from scipy.special import gamma
@@ -113,7 +113,7 @@ class DrizzleProducts:
         return np.divide(a, b, out=np.zeros_like(a), where=b != 0)
 
     def _calc_lwc(self) -> np.ndarray:
-        """Calculates drizzle liquid water content (kg m-3)"""
+        """Calculates drizzle liquid water content (kg m-3)."""
         rho_water = 1000
         dia, mu, s = (self._params.get(key) for key in ("Do", "mu", "S"))
         dia = ma.array(dia)

cloudnetpy/products/drizzle_tools.py

@@ -185,7 +185,7 @@ class SpectralWidth:
     def _calc_horizontal_wind(self) -> np.ndarray:
         """Calculates magnitude of horizontal wind.
 
-        Returns
+        Returns:
             ndarray: Horizontal wind (m s-1).
 
         """

cloudnetpy/products/ier.py

@@ -1,4 +1,5 @@
 """Module for creating Cloudnet ice effective radius file using Z-T method."""
+
 import numpy as np
 from numpy import ma
 

cloudnetpy/products/iwc.py

@@ -1,4 +1,5 @@
 """Module for creating Cloudnet ice water content file using Z-T method."""
+
 import numpy as np
 from numpy import ma
 
@@ -91,9 +92,9 @@ class IwcSource(IceSource):
             retrieval_uncertainty,
             error_uncorrected,
         )
-        iwc_error[
-            (~ice_classification.is_ice | ice_classification.ice_above_rain)
-        ] = ma.masked
+        iwc_error[(~ice_classification.is_ice | ice_classification.ice_above_rain)] = (
+            ma.masked
+        )
         self.append_data(iwc_error, f"{self.product}_error")
         return lwp_prior, retrieval_uncertainty
 

cloudnetpy/products/lwc.py

@@ -1,6 +1,7 @@
 """Module for creating Cloudnet liquid water content file using scaled-adiabatic
 method.
 """
+
 import numpy as np
 from numpy import ma
 
@@ -228,9 +229,7 @@ class CloudAdjustor:
 
     def _has_converged(self, ind: int) -> bool:
         lwc_sum = ma.sum(self.lwc_adiabatic[ind, :])
-        if lwc_sum * self.lwc_source.dheight > self.lwc_source.lwp[ind]:
-            return True
-        return False
+        return lwc_sum * self.lwc_source.dheight > self.lwc_source.lwp[ind]
 
     def _out_of_bound(self, ind: int) -> bool:
         return ind >= self.lwc.shape[1] - 1

cloudnetpy/products/mwr_tools.py

@@ -15,8 +15,7 @@ from cloudnetpy.products import product_tools
 def generate_mwr_single(
     mwr_l1c_file: str, output_file: str, uuid: str | None = None
 ) -> str:
-    """
-    Generates MWR single-pointing product including liquid water path, integrated
+    """Generates MWR single-pointing product including liquid water path, integrated
     water vapor, etc. from zenith measurements.
 
     Args:
@@ -36,8 +35,7 @@ def generate_mwr_single(
 def generate_mwr_multi(
     mwr_l1c_file: str, output_file: str, uuid: str | None = None
 ) -> str:
-    """
-    Generates MWR multiple-pointing product, including relative humidity profiles,
+    """Generates MWR multiple-pointing product, including relative humidity profiles,
     etc. from scanning measurements.
 
     Args:

cloudnetpy/products/product_tools.py

@@ -1,4 +1,5 @@
 """General helper classes and functions for all products."""
+
 import os
 from typing import NamedTuple
 
@@ -185,7 +186,7 @@ class IceSource(DataSource):
     def _get_coefficients(self) -> IceCoefficients:
         """Returns coefficients for ice effective radius retrieval.
 
-        References
+        References:
             Hogan et.al. 2006, https://doi.org/10.1175/JAM2340.1
         """
         if self.product == "ier":

cloudnetpy/utils.py

@@ -1,4 +1,5 @@
 """This module contains general helper functions."""
+
 import datetime
 import logging
 import os
@@ -75,7 +76,7 @@ def seconds2date(time_in_seconds: float, epoch: Epoch = (2001, 1, 1)) -> list:
     epoch_in_seconds = datetime.datetime.timestamp(
         datetime.datetime(*epoch, tzinfo=timezone.utc),
     )
-    timestamp = time_in_seconds + epoch_in_seconds
+    timestamp = float(time_in_seconds) + epoch_in_seconds
     return (
         datetime.datetime.fromtimestamp(timestamp, tz=datetime.timezone.utc)
         .strftime("%Y %m %d %H %M %S")
@@ -84,7 +85,7 @@ def seconds2date(time_in_seconds: float, epoch: Epoch = (2001, 1, 1)) -> list:
 
 
 def datetime2decimal_hours(data: np.ndarray | list) -> np.ndarray:
-    """Converts array of datetime to decimal_hours"""
+    """Converts array of datetime to decimal_hours."""
     output = []
     for timestamp in data:
         t = timestamp.time()
@@ -153,13 +154,10 @@ def rebin_2d(
         statistic: Statistic to be calculated. Possible statistics are 'mean', 'std'.
             Default is 'mean'.
         n_min: Minimum number of points to have good statistics in a bin. Default is 1.
+        mask_zeros: Whether to mask 0 values in the returned array. Default is True.
 
     Returns:
         tuple: Rebinned data with shape (N, m) and indices of bins without enough data.
-
-    Notes:
-        0-values are masked in the returned array.
-
     """
     edges = binvec(x_new)
     result = np.zeros((len(x_new), array.shape[1]))
@@ -208,6 +206,7 @@ def rebin_1d(
         x_new: 1-D target vector (center points) with shape (N,).
         statistic: Statistic to be calculated. Possible statistics are 'mean', 'std'.
             Default is 'mean'.
+        mask_zeros: Whether to mask 0 values in the returned array. Default is True.
 
     Returns:
         Re-binned data with shape (N,).
@@ -656,7 +655,7 @@ def isscalar(array: np.ndarray | float | list) -> bool:
 
     By "scalar" we mean that array has a single value.
 
-    Examples
+    Examples:
         >>> isscalar(1)
             True
         >>> isscalar([1])
@@ -787,17 +786,13 @@ def range_to_height(range_los: np.ndarray, tilt_angle: float) -> np.ndarray:
 
 def is_empty_line(line: str) -> bool:
     """Tests if a line (of a text file) is empty."""
-    if line in ("\n", "\r\n"):
-        return True
-    return False
+    return line in ("\n", "\r\n")
 
 
 def is_timestamp(timestamp: str) -> bool:
-    """Tests if the input string is formatted as -yyyy-mm-dd hh:mm:ss"""
+    """Tests if the input string is formatted as -yyyy-mm-dd hh:mm:ss."""
     reg_exp = re.compile(r"-\d{4}-\d{2}-\d{2} \d{2}:\d{2}:\d{2}")
-    if reg_exp.match(timestamp) is not None:
-        return True
-    return False
+    return reg_exp.match(timestamp) is not None
 
 
 def get_sorted_filenames(file_path: str, extension: str) -> list:

cloudnetpy/version.py

@@ -1,4 +1,4 @@
 MAJOR = 1
 MINOR = 61
-PATCH = 15
+PATCH = 17
 __version__ = f"{MAJOR}.{MINOR}.{PATCH}"

{cloudnetpy-1.61.15.dist-info → cloudnetpy-1.61.17.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: cloudnetpy
-Version: 1.61.15
+Version: 1.61.17
 Summary: Python package for Cloudnet processing
 Author: Simo Tukiainen
 License: MIT License

cloudnetpy-1.61.17.dist-info/RECORD

@@ -0,0 +1,115 @@
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