climate-ref-esmvaltool 0.5.5__py3-none-any.whl → 0.6.0__py3-none-any.whl

climate_ref_esmvaltool/dataset_registry/data.txt

@@ -1,3 +1,4 @@
+ESMValTool/obs4MIPs/GPCP-V2.3/v20180519/pr_GPCP-SG_L3_v2.3_197901-201710.nc 4dd4678b79ef139446c8406da5aae4fed210abb2f2160ef95f6988bf83e4525b
 ESMValTool/OBS/Tier2/CERES-EBAF/OBS_CERES-EBAF_sat_Ed4.2_Amon_rlut_200003-202311.nc ede887cf2d83c848a0d71316799232e4d717662bd2f78d5aa1fc166b41d9953b
 ESMValTool/OBS/Tier2/CERES-EBAF/OBS_CERES-EBAF_sat_Ed4.2_Amon_rlutcs_200003-202311.nc e70e3273092edf01527970693271641fc6474d1974887d7d272e7d656bab83c2
 ESMValTool/OBS/Tier2/CERES-EBAF/OBS_CERES-EBAF_sat_Ed4.2_Amon_rsut_200003-202311.nc e31e648886c4fa9c09686672a06ab18fbba687ff0d6de2891616d4c8b74e215d
@@ -84,3 +85,5 @@ ESMValTool/OBS/Tier2/OSI-450-sh/OBS_OSI-450-sh_reanaly_v3_OImon_sic_201101-20111
 ESMValTool/OBS/Tier2/OSI-450-sh/OBS_OSI-450-sh_reanaly_v3_OImon_sic_201201-201212.nc 86187c3d1174053f2cba6dad010af49ceab77d368aa9314bf53c330b5f2217b9
 ESMValTool/OBS/Tier2/OSI-450-sh/OBS_OSI-450-sh_reanaly_v3_OImon_sic_201301-201312.nc 8820353570884b2ef182caaffb5986ed6268bbe199fd867f61b56e798ca01f1a
 ESMValTool/OBS/Tier2/OSI-450-sh/OBS_OSI-450-sh_reanaly_v3_OImon_sic_201401-201412.nc 7102d0db3dc02c5b0eb0cfe3535ee50171007ef5b43eb9aae1220ac21b0b98e9
+ESMValTool/OBS/Tier2/TROPFLUX/OBS6_TROPFLUX_reanaly_v1_Amon_tauu_197901-201812.nc bf313e661b42341d5090038b501ed1ff09e58201009c3fccfe45b78e116fdd78
+ESMValTool/OBS/Tier2/TROPFLUX/OBS6_TROPFLUX_reanaly_v1_Omon_tos_197901-201812.nc 5f10a5a2aa47f5d21378ad3178bf8e4b577b0ed72ef8402dc04f5ff6fc99ec07

climate_ref_esmvaltool/diagnostics/__init__.py

@@ -3,8 +3,9 @@
 from climate_ref_esmvaltool.diagnostics.climate_at_global_warming_levels import ClimateAtGlobalWarmingLevels
 from climate_ref_esmvaltool.diagnostics.cloud_radiative_effects import CloudRadiativeEffects
 from climate_ref_esmvaltool.diagnostics.ecs import EquilibriumClimateSensitivity
+from climate_ref_esmvaltool.diagnostics.enso import ENSOBasicClimatology, ENSOCharacteristics
 from climate_ref_esmvaltool.diagnostics.example import GlobalMeanTimeseries
-from climate_ref_esmvaltool.diagnostics.sea_ice_area_seasonal_cycle import SeaIceAreaSeasonalCycle
+from climate_ref_esmvaltool.diagnostics.sea_ice_area_basic import SeaIceAreaBasic
 from climate_ref_esmvaltool.diagnostics.tcr import TransientClimateResponse
 from climate_ref_esmvaltool.diagnostics.tcre import TransientClimateResponseEmissions
 from climate_ref_esmvaltool.diagnostics.zec import ZeroEmissionCommitment
@@ -12,9 +13,11 @@ from climate_ref_esmvaltool.diagnostics.zec import ZeroEmissionCommitment
 __all__ = [
     "ClimateAtGlobalWarmingLevels",
     "CloudRadiativeEffects",
+    "ENSOBasicClimatology",
+    "ENSOCharacteristics",
     "EquilibriumClimateSensitivity",
     "GlobalMeanTimeseries",
-    "SeaIceAreaSeasonalCycle",
+    "SeaIceAreaBasic",
     "TransientClimateResponse",
     "TransientClimateResponseEmissions",
     "ZeroEmissionCommitment",

climate_ref_esmvaltool/diagnostics/base.py

@@ -101,15 +101,17 @@ class ESMValToolDiagnostic(CommandLineDiagnostic):
         config = {
             "drs": {
                 "CMIP6": "ESGF",
+                "obs4MIPs": "ESGF",
             },
             "output_dir": str(definition.to_output_path("executions")),
             "rootpath": {
-                "default": str(climate_data),
+                "CMIP6": str(climate_data),
+                "obs4MIPs": str(climate_data),
             },
             "search_esgf": "never",
         }
 
-        # Configure the paths to OBS/OBS6/native6 data
+        # Configure the paths to OBS/OBS6/native6 and non-compliant obs4MIPs data
         registry = dataset_registry_manager["esmvaltool"]
         data_dir = registry.abspath / "ESMValTool"  # type: ignore[attr-defined]
         if not data_dir.exists():
@@ -129,10 +131,14 @@ class ESMValToolDiagnostic(CommandLineDiagnostic):
             config["rootpath"].update(  # type: ignore[attr-defined]
                 {
                     "OBS": str(data_dir / "OBS"),
-                    "OBS6": str(data_dir / "OBS6"),
+                    "OBS6": str(data_dir / "OBS"),
                     "native6": str(data_dir / "RAWOBS"),
                 }
             )
+            config["rootpath"]["obs4MIPs"] = [  # type: ignore[index]
+                config["rootpath"]["obs4MIPs"],  # type: ignore[index]
+                str(data_dir),
+            ]
 
         config_dir = definition.to_output_path("config")
         config_dir.mkdir()

climate_ref_esmvaltool/diagnostics/enso.py

@@ -0,0 +1,155 @@
+from pathlib import Path
+
+import pandas
+import pandas as pd
+
+from climate_ref_core.constraints import (
+    AddSupplementaryDataset,
+    RequireContiguousTimerange,
+    RequireFacets,
+    RequireOverlappingTimerange,
+)
+from climate_ref_core.datasets import ExecutionDatasetCollection, FacetFilter, SourceDatasetType
+from climate_ref_core.diagnostics import DataRequirement
+from climate_ref_core.pycmec.metric import CMECMetric, MetricCV
+from climate_ref_core.pycmec.output import CMECOutput
+from climate_ref_esmvaltool.diagnostics.base import ESMValToolDiagnostic
+from climate_ref_esmvaltool.recipe import dataframe_to_recipe
+from climate_ref_esmvaltool.types import MetricBundleArgs, OutputBundleArgs, Recipe
+
+
+class ENSOBasicClimatology(ESMValToolDiagnostic):
+    """
+    Calculate the ENSO CLIVAR metrics - background climatology.
+    """
+
+    name = "ENSO Basic Climatology"
+    slug = "enso-basic-climatology"
+    base_recipe = "ref/recipe_enso_basicclimatology.yml"
+
+    variables = (
+        "pr",
+        "tos",
+        "tauu",
+    )
+    data_requirements = (
+        DataRequirement(
+            source_type=SourceDatasetType.CMIP6,
+            filters=(
+                FacetFilter(
+                    facets={
+                        "variable_id": variables,
+                        "experiment_id": "historical",
+                    },
+                ),
+            ),
+            group_by=("source_id", "member_id", "grid_label"),
+            constraints=(
+                RequireFacets("variable_id", variables),
+                RequireContiguousTimerange(group_by=("instance_id",)),
+                RequireOverlappingTimerange(group_by=("instance_id",)),
+            ),
+        ),
+    )
+    facets = ()
+
+    @staticmethod
+    def update_recipe(recipe: Recipe, input_files: pandas.DataFrame) -> None:
+        """Update the recipe."""
+        recipe_variables = dataframe_to_recipe(input_files)
+        recipe.pop("datasets")
+        for diagnostic in recipe["diagnostics"].values():
+            for variable in diagnostic["variables"].values():
+                variable["additional_datasets"].extend(
+                    recipe_variables[variable["short_name"]]["additional_datasets"]
+                )
+
+
+class ENSOCharacteristics(ESMValToolDiagnostic):
+    """
+    Calculate the ENSO CLIVAR metrics - basic ENSO characteristics.
+    """
+
+    name = "ENSO Characteristics"
+    slug = "enso-characteristics"
+    base_recipe = "ref/recipe_enso_characteristics.yml"
+
+    data_requirements = (
+        DataRequirement(
+            source_type=SourceDatasetType.CMIP6,
+            filters=(
+                FacetFilter(
+                    facets={
+                        "variable_id": "tos",
+                        "experiment_id": "historical",
+                    },
+                ),
+            ),
+            group_by=("source_id", "member_id", "grid_label"),
+            constraints=(
+                RequireFacets("variable_id", ("tos",)),
+                RequireContiguousTimerange(group_by=("instance_id",)),
+                RequireOverlappingTimerange(group_by=("instance_id",)),
+                AddSupplementaryDataset.from_defaults("areacello", SourceDatasetType.CMIP6),
+            ),
+        ),
+    )
+    facets = ("grid_label", "member_id", "source_id", "region", "metric")
+
+    @staticmethod
+    def update_recipe(recipe: Recipe, input_files: pandas.DataFrame) -> None:
+        """Update the recipe."""
+        recipe_variables = dataframe_to_recipe(input_files)
+        recipe["datasets"] = recipe_variables["tos"]["additional_datasets"]
+        # TODO: update the observational data requirement once available on ESGF.
+        # Observations - use only one per run
+        recipe["datasets"].append(
+            # {
+            #     "dataset": "NOAA-ERSSTv5",
+            #     "version": "v5",
+            #     "project": "OBS6",
+            #     "type": "reanaly",
+            #     "tier": 2,
+            # }
+            {
+                "dataset": "TROPFLUX",
+                "version": "v1",
+                "project": "OBS6",
+                "type": "reanaly",
+                "tier": 2,
+            }
+        )
+
+    @staticmethod
+    def format_result(
+        result_dir: Path,
+        execution_dataset: ExecutionDatasetCollection,
+        metric_args: MetricBundleArgs,
+        output_args: OutputBundleArgs,
+    ) -> tuple[CMECMetric, CMECOutput]:
+        """Format the result."""
+        metrics = pd.read_csv(
+            result_dir / "work" / "diagnostic_metrics" / "plot_script" / "matrix.csv",
+            names=["dataset", "metric_name", "metric_value"],
+        )
+
+        # Update the diagnostic bundle arguments with the computed diagnostics.
+        metric_args[MetricCV.DIMENSIONS.value] = {
+            "json_structure": [
+                "region",
+                "metric",
+            ],
+            "region": {"global": {}},
+            "metric": {metric: {} for metric in metrics.metric_name},
+        }
+        metric_args[MetricCV.RESULTS.value] = {
+            "global": {
+                metric_name: metric_value
+                for metric_name, metric_value in zip(
+                    metrics.metric_name,
+                    metrics.metric_value,
+                )
+            },
+        }
+
+        return CMECMetric.model_validate(metric_args), CMECOutput.model_validate(output_args)

climate_ref_esmvaltool/diagnostics/{sea_ice_area_seasonal_cycle.py → sea_ice_area_basic.py}

@@ -11,13 +11,13 @@ from climate_ref_esmvaltool.recipe import dataframe_to_recipe
 from climate_ref_esmvaltool.types import Recipe
 
 
-class SeaIceAreaSeasonalCycle(ESMValToolDiagnostic):
+class SeaIceAreaBasic(ESMValToolDiagnostic):
     """
     Calculate seasonal cycle and time series of NH and SH sea ice area.
     """
 
-    name = "Sea ice area seasonal cycle"
-    slug = "sea-ice-area-seasonal-cycle"
+    name = "Sea ice area basic"
+    slug = "sea-ice-area-basic"
     base_recipe = "ref/recipe_ref_sea_ice_area_basic.yml"
 
     data_requirements = (
@@ -44,14 +44,13 @@ class SeaIceAreaSeasonalCycle(ESMValToolDiagnostic):
     @staticmethod
     def update_recipe(recipe: Recipe, input_files: pandas.DataFrame) -> None:
         """Update the recipe."""
-        # Overlap between observations and historical experiment.
-        timerange = "1995/2014"
-
         # Update datasets
         recipe_variables = dataframe_to_recipe(input_files)
         recipe["datasets"] = recipe_variables["siconc"]["additional_datasets"]
+
+        # Use the timerange from the recipe, as defined in the variable.
         for dataset in recipe["datasets"]:
-            dataset["timerange"] = timerange
+            dataset.pop("timerange")
 
         # Update observational datasets
         nh_obs = {
@@ -65,7 +64,6 @@ class SeaIceAreaSeasonalCycle(ESMValToolDiagnostic):
                 },
             ],
             "tier": 2,
-            "timerange": timerange,
             "type": "reanaly",
             "version": "v3",
         }
@@ -76,3 +74,10 @@ class SeaIceAreaSeasonalCycle(ESMValToolDiagnostic):
         diagnostics["siarea_min"]["variables"]["sea_ice_area_sh_feb"]["additional_datasets"] = [sh_obs]
         diagnostics["siarea_seas"]["variables"]["sea_ice_area_nh"]["additional_datasets"] = [nh_obs]
         diagnostics["siarea_seas"]["variables"]["sea_ice_area_sh"]["additional_datasets"] = [sh_obs]
+
+        # Update the captions.
+        dataset = "{dataset}.{ensemble}.{grid}".format(**recipe["datasets"][0])
+        for diagnostic in diagnostics.values():
+            for script_settings in diagnostic["scripts"].values():
+                for plot_settings in script_settings["plots"].values():
+                    plot_settings["caption"] = plot_settings["caption"].replace("[dataset]", dataset)

climate_ref_esmvaltool/diagnostics/tcre.py

@@ -102,6 +102,17 @@ class TransientClimateResponseEmissions(ESMValToolDiagnostic):
         }
         recipe["diagnostics"].pop("barplot")
 
+        # Update descriptions.
+        dataset = tas_esm_1pctCO2["dataset"]
+        ensemble = tas_esm_1pctCO2["ensemble"]
+        settings = recipe["diagnostics"]["tcre"]["scripts"]["calculate_tcre"]
+        settings["caption"] = (
+            settings["caption"].replace("MPI-ESM1-2-LR", dataset).replace("r1i1p1f1", ensemble)
+        )
+        settings["pyplot_kwargs"]["title"] = (
+            settings["pyplot_kwargs"]["title"].replace("MPI-ESM1-2-LR", dataset).replace("r1i1p1f1", ensemble)
+        )
+
     @staticmethod
     def format_result(
         result_dir: Path,

climate_ref_esmvaltool/recipe.py

@@ -115,8 +115,8 @@ def dataframe_to_recipe(files: pd.DataFrame) -> dict[str, Any]:
     return variables
 
 
-_ESMVALTOOL_COMMIT = "a759ce46d5185e3784997ce38a3956e39322cdac"
-_ESMVALTOOL_VERSION = f"2.13.0.dev27+g{_ESMVALTOOL_COMMIT[:9]}"
+_ESMVALTOOL_COMMIT = "58fd0b8ece981bc97c4fbd213b11f2228d90db28"
+_ESMVALTOOL_VERSION = f"2.13.0.dev65+g{_ESMVALTOOL_COMMIT[:9]}"
 
 _RECIPES = pooch.create(
     path=pooch.os_cache("climate_ref_esmvaltool"),

climate_ref_esmvaltool/recipes.txt

@@ -2,7 +2,9 @@ examples/recipe_python.yml ab3f06d269bb2c1368f4dc39da9bcb232fb2adb1fa556ba769e6c
 recipe_calculate_gwl_exceedance_stats.yml 5aa266abc9a8029649b689a2b369a47623b0935d609354332ff4148994642d6b
 recipe_ecs.yml             0cc57034fcb64e32015b4ff949ece5df8cdb8c6f493618b50ceded119fb37918
 recipe_tcr.yml             35f9ef035a4e71aff5cac5dd26c49da2162fc00291bf3b0bd16b661b7b2f606b
-recipe_tcre.yml            4668e357e00c515a8264ac75cb319ce558289689e10189e6f9e982886c414c94
+recipe_tcre.yml            48fc9e3baf541bbcef7491853ea3a774053771dca33352b41466425faeaa38af
 recipe_zec.yml             b0af7f789b7610ab3f29a6617124aa40c40866ead958204fc199eaf82863de51
+ref/recipe_enso_basicclimatology.yml 9ea7deb7ee668e39ac44618b96496d898bd82285c22dcee4fce4695e0c9fa82b
+ref/recipe_enso_characteristics.yml 34c2518b138068ac96d212910b979d54a8fcedee2c0089b5acd56a42c41dc3e4
 ref/recipe_ref_cre.yml     4f35d9639f1008be3b5382a5bd8933a855cb5368ccf5d04a1c70227172e2e82c
-ref/recipe_ref_sea_ice_area_basic.yml 552e282a16ec355778b06f33897e1b8ba8388e5f8a5f814c4c42d91f63007457
+ref/recipe_ref_sea_ice_area_basic.yml 7d01a8527880663ca28284772f83a8356d9972fb4f022a4000e50a56ce044b09

{climate_ref_esmvaltool-0.5.5.dist-info → climate_ref_esmvaltool-0.6.0.dist-info}/METADATA

@@ -1,9 +1,9 @@
 Metadata-Version: 2.4
 Name: climate-ref-esmvaltool
-Version: 0.5.5
+Version: 0.6.0
 Summary: ESMValTool diagnostic provider for the Rapid Evaluation Framework
-Author-email: ESMValTool development team <esmvaltool-dev@listserv.dfn.de>
-License: Apache-2.0
+Author-email: ESMValTool development team <esmvaltool-dev@listserv.dfn.de>, Jared Lewis <jared.lewis@climate-resource.com>
+License-Expression: Apache-2.0
 License-File: LICENCE
 License-File: NOTICE
 Classifier: Development Status :: 3 - Alpha

{climate_ref_esmvaltool-0.5.5.dist-info → climate_ref_esmvaltool-0.6.0.dist-info}/RECORD

@@ -1,24 +1,25 @@
 climate_ref_esmvaltool/__init__.py,sha256=4WHuuZJvK50Djb831ws_Y2EtFLWicwsLIxhOvRld2BE,994
 climate_ref_esmvaltool/_version.py,sha256=Ed7geC_W9fxIocCdAvK1fk2k-pDt6FGOM_LEgR06-24,94
 climate_ref_esmvaltool/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-climate_ref_esmvaltool/recipe.py,sha256=wt-KTypBnx8fVfkix6UPJqOEjIv84YW4njasTqdbdzU,5111
-climate_ref_esmvaltool/recipes.txt,sha256=DJZa_kMV9xn6AAkBk05Fzf2Ru44j8wRHq0CWxCaTEnA,762
+climate_ref_esmvaltool/recipe.py,sha256=DWgcQuj58YM2VzRVt2rP3upbXHsqQZ9QihGqCONzAe0,5111
+climate_ref_esmvaltool/recipes.txt,sha256=97Nxkw9aF6c0UiE1js_05MJRcFGEopZordWHqBmNrRQ,965
 climate_ref_esmvaltool/types.py,sha256=luUMNS3LJGJEecVrHRDh5l5ElnQgz7G0auCtA_Jwnno,117
-climate_ref_esmvaltool/dataset_registry/data.txt,sha256=uovw8JYEyTF7DSIRQ_PzLG2paETpG9FdJta8djivDrM,12910
-climate_ref_esmvaltool/diagnostics/__init__.py,sha256=9PpcQ3aSnwCdUHa54hkELfVrUgVjUzDguHqkG3B1xTs,1004
-climate_ref_esmvaltool/diagnostics/base.py,sha256=1FSIvANKoBIg8VSW-1CizWqajqZgk9If6_ACU0W47DE,7575
+climate_ref_esmvaltool/dataset_registry/data.txt,sha256=MRDNDcBNbi-Qg17i_XxTHDBuHfCju7RHxbEwEExn5-o,13344
+climate_ref_esmvaltool/diagnostics/__init__.py,sha256=c340A--rrRHOt52ea9mLKMFVI6qdd-8l0I-jaKL5NoI,1128
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 climate_ref_esmvaltool/diagnostics/climate_at_global_warming_levels.py,sha256=o5xSAiZJnuMhG3i8lO1QPsN4YSk3s2jhEWi3pdMAJNw,3532
 climate_ref_esmvaltool/diagnostics/cloud_radiative_effects.py,sha256=WdG49r6zDbikpKiM5bFckl3oOwyFgBfARLrYR6OzlPs,2815
 climate_ref_esmvaltool/diagnostics/ecs.py,sha256=7Zb1llwOqW0vs-7j5iri3HWQEuvcgyeh0O0CDlBwrIA,5290
+climate_ref_esmvaltool/diagnostics/enso.py,sha256=dn6_vrNKoBUiMiMGJ8NLHI4ntCnSaK0fXz95f0UKP3E,5359
 climate_ref_esmvaltool/diagnostics/example.py,sha256=F2mazDsSju68v3JE9aU6u4SwszIN3wFR5dRlQExvNns,1981
-climate_ref_esmvaltool/diagnostics/sea_ice_area_seasonal_cycle.py,sha256=KdpXdunin-Yz2RIZms09FJwdw8Dm2Rh3z305oh8LZTA,2874
+climate_ref_esmvaltool/diagnostics/sea_ice_area_basic.py,sha256=PPJTvr97Mgie7iuADT6pZvC8byqTwJ2GhKwcxFVSNLE,3180
 climate_ref_esmvaltool/diagnostics/tcr.py,sha256=v1HwKG6JZwGZ4_lOBWj2YeqT5Ha83HliBqBeuTs-lN0,4668
-climate_ref_esmvaltool/diagnostics/tcre.py,sha256=iMiPklrRdO7tFyv21OZ5oemp4fXUycMF4s_GNNaqCZk,4880
+climate_ref_esmvaltool/diagnostics/tcre.py,sha256=s9wl2LEO8qKVoYjLE_Iwfl89jOtP6zH_teplg-yhzz0,5388
 climate_ref_esmvaltool/diagnostics/zec.py,sha256=iB1pO0VGOlXAtTzyQlFN0tMfDfL9Leq1QGVE70TagOM,3925
 climate_ref_esmvaltool/requirements/conda-lock.yml,sha256=i9jv2YX1KylXWl4oJQJWEgD6ZmY5pAsj_cbKAxzudFs,588058
 climate_ref_esmvaltool/requirements/environment.yml,sha256=Pc3Vq0ZGwSEc_bOxDYJsgoro13-YrGWjpdyO1UQwHEM,78
-climate_ref_esmvaltool-0.5.5.dist-info/METADATA,sha256=ZPRN9S-XD1koXnffBCa1GI42pq5TYM9QCSqkDvlVFhM,2366
-climate_ref_esmvaltool-0.5.5.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
-climate_ref_esmvaltool-0.5.5.dist-info/licenses/LICENCE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
-climate_ref_esmvaltool-0.5.5.dist-info/licenses/NOTICE,sha256=4qTlax9aX2-mswYJuVrLqJ9jK1IkN5kSBqfVvYLF3Ws,128
-climate_ref_esmvaltool-0.5.5.dist-info/RECORD,,
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+climate_ref_esmvaltool-0.6.0.dist-info/licenses/NOTICE,sha256=4qTlax9aX2-mswYJuVrLqJ9jK1IkN5kSBqfVvYLF3Ws,128
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