climate-ref-celery 0.5.0__py3-none-any.whl

climate_ref_celery/__init__.py

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+"""
+Rapid evaluating climate data
+"""
+
+import importlib.metadata
+
+__version__ = importlib.metadata.version("climate-ref-celery")

climate_ref_celery/app.py

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+"""
+Celery app creation
+"""
+
+import os
+from typing import Any
+
+from celery import Celery
+from celery.signals import setup_logging, worker_ready
+from loguru import logger
+from rich.pretty import pretty_repr
+
+from climate_ref.config import Config
+from climate_ref_core.logging import add_log_handler, capture_logging
+
+os.environ.setdefault("CELERY_CONFIG_MODULE", "climate_ref_celery.celeryconf.dev")
+
+
+def create_celery_app(name: str) -> Celery:
+    """
+    Create a Celery app
+
+    This function creates a new Celery app with the given name and configuration module.
+    The configuration module is loaded from the environment variable `CELERY_CONFIG_MODULE`
+    which defaults to `climate_ref_celery.celeryconf.dev` if not set.
+    """
+    app = Celery(name)
+    app.config_from_envvar("CELERY_CONFIG_MODULE")
+
+    return app
+
+
+@setup_logging.connect
+def setup_logging_handler(loglevel: int, **kwargs: Any) -> None:  # pragma: no cover
+    """Set up logging for the Celery worker using the celery signal"""
+    capture_logging()
+
+    # Include process name in celery logs
+    msg_format = (
+        "<green>{time:YYYY-MM-DD HH:mm:ss.SSS Z}</green> | <level>{level: <8}</level> | {process.name} | "
+        "<cyan>{name}</cyan>:<cyan>{function}</cyan>:<cyan>{line}</cyan> - <level>{message}</level>"
+    )
+
+    logger.remove()
+    add_log_handler(level=loglevel, format=msg_format, colorize=True)
+
+
+@worker_ready.connect
+def worker_ready_handler(**kwargs: Any) -> None:  # pragma: no cover
+    """
+    Log a message when the worker is ready
+    """
+    config = Config.default()
+    logger.info(f"Worker ready with config {pretty_repr(config)}")
+
+
+app = create_celery_app("climate_ref_celery")

climate_ref_celery/celeryconf/__init__.py

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+"""
+Celery configuration.
+
+The modules in this package are used to configure Celery for different environments.
+The selected environment is determined by the `CELERY_CONFIG_MODULE` environment variable.
+The default environment is `climate_ref_celery.celeryconf.dev` which is used when running the app locally.
+"""

climate_ref_celery/celeryconf/base.py

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+"""
+Base configuration for Celery.
+
+Other environments can use these settings as a base and override them as needed.
+"""
+
+from climate_ref_core.env import get_env
+
+env = get_env()
+
+broker_url = env.str("CELERY_BROKER_URL", "redis://localhost:6379/1")
+result_backend = env.str("CELERY_RESULT_BACKEND", broker_url)
+broker_connection_retry_on_startup = True
+
+# Accept JSON and pickle as content
+accept_content = ["json", "pickle"]
+task_serializer = "pickle"
+result_serializer = "pickle"

climate_ref_celery/celeryconf/dev.py

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+"""Configuration for running celery locally"""
+
+from loguru import logger
+
+from .base import *  # noqa: F403
+
+# Currently the dev environment is the same as the base environment
+logger.info("Using dev configuration")

climate_ref_celery/celeryconf/prod.py

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+"""Configuration for running celery in production"""
+
+from loguru import logger
+
+from .base import *  # noqa: F403
+
+# Currently the production environment is the same as the base environment
+logger.info("Using prod configuration")

climate_ref_celery/cli.py

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+"""
+Managing remote execution workers
+"""
+
+import importlib
+
+import typer
+
+from climate_ref_celery.app import create_celery_app
+from climate_ref_celery.tasks import register_celery_tasks
+from climate_ref_core.providers import DiagnosticProvider
+
+app = typer.Typer(help=__doc__)
+
+
+def import_provider(provider_package: str) -> DiagnosticProvider:
+    """
+    Import the provider from a given package.
+
+    Parameters
+    ----------
+    provider_package:
+        The package to import the provider from
+
+    Raises
+    ------
+    typer.Abort
+        If the provider_package does not define a 'provider' variable
+
+        If the provider_package is not found
+
+    Returns
+    -------
+    :
+        The provider instance
+    """
+    try:
+        imp = importlib.import_module(provider_package.replace("-", "_"))
+    except ModuleNotFoundError:
+        typer.echo(f"Package '{provider_package}' not found")
+        raise typer.Abort()
+
+    # Get the provider from the provider_package
+    try:
+        provider = imp.provider
+    except AttributeError:
+        typer.echo("The package must define a 'provider' attribute")
+        raise typer.Abort()
+    if not isinstance(provider, DiagnosticProvider):
+        typer.echo(f"Expected DiagnosticProvider, got {type(provider)}")
+        raise typer.Abort()
+    return provider
+
+
+@app.command()
+def start_worker(
+    loglevel: str = typer.Option("info", help="Log level for the worker"),
+    package: str | None = typer.Option(help="Package to import tasks from", default=None),
+    extra_args: list[str] = typer.Argument(None, help="Additional arguments for the worker"),
+) -> None:
+    """
+    Start a Celery worker for the given package.
+
+    A celery worker enables the execution of tasks in the background on multiple different nodes.
+    This worker will register a celery task for each diagnostic in the provider.
+    The worker tasks can be executed by sending a celery task with the name
+    '{package_slug}_{diagnostic_slug}'.
+
+    The package must define a 'provider' variable that is an instance of 'ref_core.DiagnosticProvider'.
+    """
+    # Create a new celery app
+    celery_app = create_celery_app("climate_ref_celery")
+
+    if package:
+        # Attempt to import the provider
+        provider = import_provider(package)
+
+        # Wrap each diagnostics in the provider with a celery tasks
+        register_celery_tasks(celery_app, provider)
+        queue = provider.slug
+    else:
+        # This might need some tweaking in later PRs to pull in the appropriate tasks
+        import climate_ref_celery.worker_tasks  # noqa: F401
+
+        queue = "celery"
+
+    argv = ["worker", f"--loglevel={loglevel}", f"--queues={queue}", *(extra_args or [])]
+    celery_app.worker_main(argv=argv)
+
+
+@app.command()
+def list_config() -> None:
+    """
+    List the celery configuration
+    """
+    celery_app = create_celery_app("climate_ref_celery")
+
+    print(celery_app.conf.humanize())
+
+
+if __name__ == "__main__":  # pragma: no cover
+    app()

climate_ref_celery/executor.py

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+"""
+Executor for running diagnostics asynchronously using Celery
+"""
+
+import time
+from typing import Any
+
+import celery.exceptions
+import celery.result
+from loguru import logger
+from tqdm import tqdm
+
+from climate_ref.config import Config
+from climate_ref.models import Execution
+from climate_ref_celery.app import app
+from climate_ref_celery.tasks import generate_task_name
+from climate_ref_core.diagnostics import Diagnostic, ExecutionDefinition, ExecutionResult
+from climate_ref_core.executor import Executor
+from climate_ref_core.providers import DiagnosticProvider
+
+
+class CeleryExecutor(Executor):
+    """
+    Run a diagnostic asynchronously
+
+    Celery is an asynchronous task queue/job queue based on distributed message passing.
+    Celery uses a message broker to distribute tasks across a cluster of worker nodes.
+    The worker nodes are responsible for executing the tasks.
+    The message broker used in this case is [Redis](https://github.com/redis/redis).
+    The worker node may be running on the same machine as the client or on a different machine,
+    either natively or via a docker container.
+
+    We cannot resume tasks that are in progress if the process terminates.
+    That should be possible tracking some additional state in the database.
+    """
+
+    name = "celery"
+
+    def __init__(self, *, config: Config, **kwargs: Any) -> None:
+        self.config = config
+        super().__init__(**kwargs)  # type: ignore
+        self._results: list[celery.result.AsyncResult[ExecutionResult]] = []
+
+    def run(
+        self,
+        provider: DiagnosticProvider,
+        diagnostic: Diagnostic,
+        definition: ExecutionDefinition,
+        execution: Execution | None = None,
+    ) -> None:
+        """
+        Run a diagnostic calculation
+
+        This will queue the diagnostic to be run by a Celery worker.
+        The executions will be stored in the database when the task completes if `execution`
+        is specified.
+        No result will be returned from this function.
+        Instead, you can periodically check the status of the task in the database.
+
+        Tasks may not execute immediately if the correct workers are not available.
+        The task will be queued and executed when a worker becomes available.
+
+        Parameters
+        ----------
+        provider
+            Provider for the diagnostic
+        diagnostic
+            Diagnostic to run
+        definition
+            A description of the information needed for this execution of the diagnostic
+            This includes relative paths to the data files,
+            which will be converted to absolute paths when being executed
+        execution
+            Result of the diagnostic execution
+            This is a database object that contains the executions of the execution.
+            If provided, it will be updated with the executions of the execution.
+            This may happen asynchronously, so the executions may not be immediately available.
+        """
+        from climate_ref_celery.worker_tasks import handle_result
+
+        name = generate_task_name(provider, diagnostic)
+
+        async_result = app.send_task(
+            name,
+            args=[definition, self.config.log_level],
+            queue=provider.slug,
+            link=handle_result.s(execution_id=execution.id).set(queue="celery") if execution else None,
+        )
+        logger.debug(f"Celery task {async_result.id} submitted")
+        self._results.append(async_result)
+
+    def join(self, timeout: float) -> None:
+        """
+        Wait for all executions to finish
+
+        This will block until all executions have finished running,
+        and display a progress bar while waiting.
+
+        Any tasks still running after the timeout will continue to run in the background.
+
+        Parameters
+        ----------
+        timeout
+            Maximum time to wait in seconds before raising a TimeoutError
+
+        Raises
+        ------
+        TimeoutError
+            If all executions aren't completed within the specified timeout
+        """
+        start_time = time.time()
+        refresh_time = 0.5  # Time to wait between checking for completed tasks in seconds
+
+        results = self._results
+        t = tqdm(total=len(results), desc="Waiting for executions to complete", unit="execution")
+
+        try:
+            while results:
+                # Wait for a short time before checking for completed executions
+                time.sleep(refresh_time)
+
+                elapsed_time = time.time() - start_time
+
+                if elapsed_time > timeout:
+                    raise TimeoutError("Not all tasks completed within the specified timeout")
+
+                # Iterate over a copy of the list and remove finished tasks
+                for result in results[:]:
+                    if result.ready():
+                        t.update(n=1)
+                        results.remove(result)
+        finally:
+            t.close()

climate_ref_celery/tasks.py

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+"""
+Task generation and registration for Celery
+
+This module provides a factory function to create Celery tasks for diagnostics.
+These celery tasks are then registered with the Celery app to enable them to be run asynchronously.
+
+Since the diagnostic definition may be in a different virtual environment it is not possible to directly
+import the provider and create the tasks in both the worker and the main process.
+
+Instead, the tasks are registered only in the worker process.
+The main process can then send tasks to the worker using the task name.
+The main process is responsible for tracking what diagnostics have been registered
+and to respond to new workers coming online.
+"""
+
+from collections.abc import Callable
+
+from celery import Celery
+from loguru import logger
+
+from climate_ref_core.diagnostics import Diagnostic, ExecutionDefinition, ExecutionResult
+from climate_ref_core.logging import redirect_logs
+from climate_ref_core.providers import DiagnosticProvider
+
+
+def generate_task_name(provider: DiagnosticProvider, diagnostic: Diagnostic) -> str:
+    """
+    Generate the name of the task for the given provider and diagnostic
+    """
+    return f"{provider.slug}.{diagnostic.slug}"
+
+
+def _diagnostic_task_factory(
+    diagnostic: Diagnostic,
+) -> Callable[
+    [ExecutionDefinition, str],
+    ExecutionResult,
+]:
+    """
+    Create a new task for the given diagnostic
+    """
+
+    def task(definition: ExecutionDefinition, log_level: str) -> ExecutionResult:
+        """
+        Task to run the diagnostic
+        """
+        logger.info(f"Running diagnostic {diagnostic.name} with definition {definition}")
+        try:
+            with redirect_logs(definition, log_level):
+                return diagnostic.run(definition)
+        except Exception:
+            logger.exception(f"Error running diagnostic {diagnostic.slug}:{definition.key}")
+            # TODO: This exception should be caught and a unsuccessful result returned.
+            raise
+
+    return task
+
+
+def register_celery_tasks(app: Celery, provider: DiagnosticProvider) -> None:
+    """
+    Register all tasks for the given provider
+
+    This is run on worker startup to register all tasks a given provider
+
+    Parameters
+    ----------
+    app
+        The Celery app to register the tasks with
+    provider
+        The provider to register tasks for
+    """
+    for metric in provider.diagnostics():
+        print(f"Registering task for diagnostic {metric.name}")
+        app.task(  # type: ignore
+            _diagnostic_task_factory(metric),
+            name=generate_task_name(provider, metric),
+            queue=provider.slug,
+        )

climate_ref_celery/worker_tasks.py

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+"""
+Celery worker tasks for handling diagnostic execution executions.
+"""
+
+from celery import current_app
+from loguru import logger
+
+from climate_ref.config import Config
+from climate_ref.database import Database
+from climate_ref.executor import handle_execution_result
+from climate_ref.models import Execution
+from climate_ref_core.diagnostics import ExecutionResult
+
+
+@current_app.task
+def handle_result(result: ExecutionResult, execution_id: int) -> None:
+    """
+    Handle the result of a diagnostic execution
+
+    This function is called when a diagnostic execution is completed.
+
+    Parameters
+    ----------
+    execution_id
+        The unique identifier for the diagnostic execution
+    result
+        The result of the diagnostic execution
+    """
+    logger.info(f"Handling result for execution {execution_id} + {result}")
+
+    config = Config.default()
+    db = Database.from_config(config, run_migrations=False)
+
+    with db.session.begin():
+        execution = db.session.get(Execution, execution_id)
+
+        if execution is None:
+            logger.error(f"Execution {execution_id} not found")
+            return
+
+        handle_execution_result(config, db, execution, result)

climate_ref_celery-0.5.0.dist-info/METADATA

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+Metadata-Version: 2.4
+Name: climate-ref-celery
+Version: 0.5.0
+Summary: Celery app for mananging tasks and workers
+Author-email: Jared Lewis <jared.lewis@climate-resource.com>
+License-File: LICENCE
+License-File: NOTICE
+Classifier: Development Status :: 4 - Beta
+Classifier: Intended Audience :: Developers
+Classifier: Intended Audience :: Science/Research
+Classifier: Operating System :: OS Independent
+Classifier: Programming Language :: Python
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
+Classifier: Topic :: Scientific/Engineering
+Requires-Python: >=3.11
+Requires-Dist: celery[redis]>=5.4.0
+Requires-Dist: cmip-ref-core
+Requires-Dist: environs>=9
+Requires-Dist: loguru>=0.7.2
+Requires-Dist: tqdm>=4.67.1
+Requires-Dist: typer>=0.12.0
+Description-Content-Type: text/markdown
+
+# climate-ref-celery
+
+[![PyPI version](https://badge.fury.io/py/climate-ref-celery.svg)](https://badge.fury.io/py/climate-ref-celery)
+[![Documentation Status](https://readthedocs.org/projects/climate-ref/badge/?version=latest)](https://climate-ref.readthedocs.io/en/latest/?badge=latest)
+[![License](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0)
+[![Python Version](https://img.shields.io/badge/python-3.11%2B-blue)](https://www.python.org/downloads/)
+
+This package provides Celery task generation and worker management for the Climate REF (Rapid Evaluation Framework).
+
+The `climate_ref_celery` package provides a CLI tool(`ref-celery`) to start a worker instance for a diagnostics provider.
+This worker instance will listen for tasks related to a provider and execute them.
+The compute engine worker will then collect the results of these tasks and store them in the database.
+This allows for the REF to be run in a distributed manner,
+with multiple workers running on different machines with a centrally managed database.
+
+## Installation
+
+```bash
+pip install climate-ref-celery
+```
+
+## Features
+
+- Distributed task execution for metrics providers
+- Worker management and monitoring
+- Automatic task routing and scheduling
+- Results collection and storage
+- Support for multiple worker instances
+
+## Usage
+
+### Starting a Worker
+
+To start a worker instance for a specific metrics provider:
+
+```bash
+# Using the standalone CLI
+ref-celery start-worker --package climate_ref_pmp
+
+# Or using the main REF CLI
+ref celery start-worker --package climate_ref_pmp
+```
+
+### Configuration
+
+Each worker instance may not share the same configuration as the orchestrator.
+This is because the worker may be running on a different machine with different resources available or
+directories.
+
+Each worker instance requires access to a shared input data directory and the output directory.
+If the worker is deployed as a docker container these directories can be mounted as volumes.
+
+Each worker instance can be configured independently. Required configurations include:
+
+- Shared input data directory
+- Output directory for results
+- Database connection settings
+
+
+## Documentation
+
+For detailed documentation, please visit [https://climate-ref.readthedocs.io/](https://climate-ref.readthedocs.io/)
+
+## Contributing
+
+Contributions are welcome! Please see the main project's [Contributing Guide](https://climate-ref.readthedocs.io/en/latest/contributing/) for more information.
+
+## License
+
+This project is licensed under the Apache License 2.0 - see the [LICENSE](LICENSE) file for details.

climate_ref_celery-0.5.0.dist-info/RECORD

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climate_ref_celery-0.5.0.dist-info/WHEEL

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+Wheel-Version: 1.0
+Generator: hatchling 1.27.0
+Root-Is-Purelib: true
+Tag: py3-none-any

climate_ref_celery-0.5.0.dist-info/entry_points.txt

@@ -0,0 +1,2 @@
+[console_scripts]
+ref-celery = climate_ref_celery.cli:app

climate_ref_celery-0.5.0.dist-info/licenses/LICENCE

@@ -0,0 +1,201 @@
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+                        http://www.apache.org/licenses/
+
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+
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+
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climate_ref_celery-0.5.0.dist-info/licenses/NOTICE

@@ -0,0 +1,3 @@
+Assessment Fast Track Rapid Evaluation Framework
+
+Copyright 2024- CMIP7 Assessment Fast Track REF Technical Implementation Team