cifar10-tools 0.1.0__py3-none-any.whl → 0.3.0__py3-none-any.whl

cifar10_tools/pytorch/__init__.py

@@ -0,0 +1,33 @@
+'''PyTorch utilities for CIFAR-10 classification.'''
+
+from cifar10_tools.pytorch.data import download_cifar10_data
+from cifar10_tools.pytorch.evaluation import evaluate_model
+from cifar10_tools.pytorch.training import train_model
+from cifar10_tools.pytorch.plotting import (
+    plot_sample_images,
+    plot_learning_curves,
+    plot_confusion_matrix,
+    plot_class_probability_distributions,
+    plot_evaluation_curves,
+    plot_optimization_results
+)
+from cifar10_tools.pytorch.hyperparameter_optimization import (
+    create_cnn,
+    train_trial,
+    create_objective
+)
+
+__all__ = [
+    'download_cifar10_data',
+    'evaluate_model',
+    'train_model',
+    'plot_sample_images',
+    'plot_learning_curves',
+    'plot_confusion_matrix',
+    'plot_class_probability_distributions',
+    'plot_evaluation_curves',
+    'plot_optimization_results',
+    'create_cnn',
+    'train_trial',
+    'create_objective'
+]

cifar10_tools/pytorch/data.py

@@ -4,7 +4,7 @@ during devcontainer creation'''
 from pathlib import Path
 from torchvision import datasets
 
-def download_cifar10_data(data_dir: str='data/pytorch/CIFAR10'):
+def download_cifar10_data(data_dir: str='data/pytorch/cifar10'):
     '''Download CIFAR-10 dataset using torchvision.datasets.'''
 
     data_dir = Path(data_dir)

cifar10_tools/pytorch/hyperparameter_optimization.py

@@ -0,0 +1,236 @@
+'''Hyperparameter optimization utilities for CNN models using Optuna.
+
+This module provides functions for building configurable CNN architectures
+and running hyperparameter optimization with Optuna.
+'''
+
+from typing import Callable
+
+import optuna
+import torch
+import torch.nn as nn
+import torch.optim as optim
+from torch.utils.data import DataLoader
+
+
+def create_cnn(
+    n_conv_blocks: int,
+    initial_filters: int,
+    fc_units_1: int,
+    fc_units_2: int,
+    dropout_rate: float,
+    use_batch_norm: bool,
+    num_classes: int = 10,
+    in_channels: int = 3,
+    input_size: int = 32
+) -> nn.Sequential:
+    '''Create a CNN with configurable architecture.
+    
+    Args:
+        n_conv_blocks: Number of convolutional blocks (1-5)
+        initial_filters: Number of filters in first conv layer (doubles each block)
+        fc_units_1: Number of units in first fully connected layer
+        fc_units_2: Number of units in second fully connected layer
+        dropout_rate: Dropout probability
+        use_batch_norm: Whether to use batch normalization
+        num_classes: Number of output classes (default: 10 for CIFAR-10)
+        in_channels: Number of input channels (default: 3 for RGB)
+        input_size: Input image size (default: 32 for CIFAR-10)
+    
+    Returns:
+        nn.Sequential model
+    '''
+    layers = []
+    current_channels = in_channels
+    current_size = input_size
+    
+    for block_idx in range(n_conv_blocks):
+        out_channels = initial_filters * (2 ** block_idx)
+        
+        # First conv in block
+        layers.append(nn.Conv2d(current_channels, out_channels, kernel_size=3, padding=1))
+
+        if use_batch_norm:
+            layers.append(nn.BatchNorm2d(out_channels))
+
+        layers.append(nn.ReLU())
+        
+        # Second conv in block
+        layers.append(nn.Conv2d(out_channels, out_channels, kernel_size=3, padding=1))
+
+        if use_batch_norm:
+            layers.append(nn.BatchNorm2d(out_channels))
+
+        layers.append(nn.ReLU())
+        
+        # Pooling and dropout
+        layers.append(nn.MaxPool2d(2, 2))
+        layers.append(nn.Dropout(dropout_rate))
+        
+        current_channels = out_channels
+        current_size //= 2
+    
+    # Calculate flattened size
+    final_channels = initial_filters * (2 ** (n_conv_blocks - 1))
+    flattened_size = final_channels * current_size * current_size
+    
+    # Classifier (3 fully connected layers)
+    layers.append(nn.Flatten())
+    layers.append(nn.Linear(flattened_size, fc_units_1))
+    layers.append(nn.ReLU())
+    layers.append(nn.Dropout(dropout_rate))
+    layers.append(nn.Linear(fc_units_1, fc_units_2))
+    layers.append(nn.ReLU())
+    layers.append(nn.Dropout(dropout_rate))
+    layers.append(nn.Linear(fc_units_2, num_classes))
+    
+    return nn.Sequential(*layers)
+
+
+def train_trial(
+    model: nn.Module,
+    optimizer: optim.Optimizer,
+    criterion: nn.Module,
+    train_loader: DataLoader,
+    val_loader: DataLoader,
+    n_epochs: int,
+    trial: optuna.Trial
+) -> float:
+    '''Train a model for a single Optuna trial with pruning support.
+    
+    Args:
+        model: PyTorch model to train
+        optimizer: Optimizer for training
+        criterion: Loss function
+        train_loader: DataLoader for training data
+        val_loader: DataLoader for validation data
+        n_epochs: Number of epochs to train
+        trial: Optuna trial object for reporting and pruning
+    
+    Returns:
+        Best validation accuracy achieved during training
+    '''
+    best_val_accuracy = 0.0
+    
+    for epoch in range(n_epochs):
+        # Training phase
+        model.train()
+
+        for images, labels in train_loader:
+            optimizer.zero_grad()
+            outputs = model(images)
+            loss = criterion(outputs, labels)
+            loss.backward()
+            optimizer.step()
+        
+        # Validation phase
+        model.eval()
+        val_correct = 0
+        val_total = 0
+        
+        with torch.no_grad():
+            for images, labels in val_loader:
+                outputs = model(images)
+                _, predicted = torch.max(outputs.data, 1)
+                val_total += labels.size(0)
+                val_correct += (predicted == labels).sum().item()
+        
+        val_accuracy = 100 * val_correct / val_total
+        best_val_accuracy = max(best_val_accuracy, val_accuracy)
+        
+        # Report intermediate value for pruning
+        trial.report(val_accuracy, epoch)
+        
+        # Prune unpromising trials
+        if trial.should_prune():
+            raise optuna.TrialPruned()
+    
+    return best_val_accuracy
+
+
+def create_objective(
+    train_loader: DataLoader,
+    val_loader: DataLoader,
+    n_epochs: int,
+    device: torch.device,
+    num_classes: int = 10,
+    in_channels: int = 3
+) -> Callable[[optuna.Trial], float]:
+    '''Create an Optuna objective function for CNN hyperparameter optimization.
+    
+    This factory function creates a closure that captures the data loaders and
+    training configuration, returning an objective function suitable for Optuna.
+    
+    Args:
+        train_loader: DataLoader for training data
+        val_loader: DataLoader for validation data
+        n_epochs: Number of epochs per trial
+        device: Device to train on (cuda or cpu)
+        num_classes: Number of output classes (default: 10)
+        in_channels: Number of input channels (default: 3 for RGB)
+    
+    Returns:
+        Objective function for optuna.Study.optimize()
+    
+    Example:
+        >>> objective = create_objective(train_loader, val_loader, n_epochs=50, device=device)
+        >>> study = optuna.create_study(direction='maximize')
+        >>> study.optimize(objective, n_trials=100)
+    '''
+    
+    def objective(trial: optuna.Trial) -> float:
+        '''Optuna objective function for CNN hyperparameter optimization.'''
+        
+        # Suggest hyperparameters
+        n_conv_blocks = trial.suggest_int('n_conv_blocks', 1, 5)
+        initial_filters = trial.suggest_categorical('initial_filters', [8, 16, 32, 64, 128])
+        fc_units_1 = trial.suggest_categorical('fc_units_1', [128, 256, 512, 1024, 2048])
+        fc_units_2 = trial.suggest_categorical('fc_units_2', [32, 64, 128, 256, 512])
+        dropout_rate = trial.suggest_float('dropout_rate', 0.2, 0.75)
+        use_batch_norm = trial.suggest_categorical('use_batch_norm', [True, False])
+        learning_rate = trial.suggest_float('learning_rate', 1e-5, 1e-1, log=True)
+        optimizer_name = trial.suggest_categorical('optimizer', ['Adam', 'SGD', 'RMSprop'])
+        
+        # Create model
+        model = create_cnn(
+            n_conv_blocks=n_conv_blocks,
+            initial_filters=initial_filters,
+            fc_units_1=fc_units_1,
+            fc_units_2=fc_units_2,
+            dropout_rate=dropout_rate,
+            use_batch_norm=use_batch_norm,
+            num_classes=num_classes,
+            in_channels=in_channels
+        ).to(device)
+        
+        # Define optimizer
+        if optimizer_name == 'Adam':
+            optimizer = optim.Adam(model.parameters(), lr=learning_rate)
+
+        elif optimizer_name == 'SGD':
+            momentum = trial.suggest_float('sgd_momentum', 0.8, 0.99)
+            optimizer = optim.SGD(model.parameters(), lr=learning_rate, momentum=momentum)
+        
+        else:  # RMSprop
+            optimizer = optim.RMSprop(model.parameters(), lr=learning_rate)
+        
+        criterion = nn.CrossEntropyLoss()
+        
+        # Train model and return best validation accuracy
+        try:
+            return train_trial(
+                model=model,
+                optimizer=optimizer,
+                criterion=criterion,
+                train_loader=train_loader,
+                val_loader=val_loader,
+                n_epochs=n_epochs,
+                trial=trial
+            )
+
+        except torch.cuda.OutOfMemoryError:
+            # Clear CUDA cache and skip this trial
+            torch.cuda.empty_cache()
+            raise optuna.TrialPruned(f'CUDA OOM with params: {trial.params}')
+    
+    return objective

cifar10_tools/pytorch/plotting.py

@@ -0,0 +1,307 @@
+'''Plotting functions for CIFAR-10 models.'''
+
+import matplotlib.pyplot as plt
+import numpy as np
+from torch.utils.data import Dataset
+
+
+def plot_sample_images(
+    dataset: Dataset,
+    class_names: list[str],
+    nrows: int = 2,
+    ncols: int = 5,
+    figsize: tuple[float, float] | None = None
+) -> tuple[plt.Figure, np.ndarray]:
+    '''Plot sample images from a dataset.
+    
+    Automatically handles both grayscale (1 channel) and RGB (3 channel) images.
+    
+    Args:
+        dataset: PyTorch dataset containing (image, label) tuples.
+        class_names: List of class names for labeling.
+        nrows: Number of rows in the grid.
+        ncols: Number of columns in the grid.
+        figsize: Figure size (width, height). Defaults to (ncols*1.5, nrows*1.5).
+        
+    Returns:
+        Tuple of (figure, axes array).
+    '''
+    if figsize is None:
+        figsize = (ncols * 1.5, nrows * 1.5)
+    
+    fig, axes = plt.subplots(nrows=nrows, ncols=ncols, figsize=figsize)
+    axes = axes.flatten()
+
+    for i, ax in enumerate(axes):
+        # Get image and label from dataset
+        img, label = dataset[i]
+        
+        # Unnormalize for plotting
+        img = img * 0.5 + 0.5
+        img = img.numpy()
+        
+        # Handle grayscale vs RGB images
+        if img.shape[0] == 1:
+
+            # Grayscale: squeeze channel dimension
+            img = img.squeeze()
+            ax.imshow(img, cmap='gray')
+    
+        else:
+
+            # RGB: transpose from (C, H, W) to (H, W, C)
+            img = np.transpose(img, (1, 2, 0))
+            ax.imshow(img)
+        
+        ax.set_title(class_names[label])
+        ax.axis('off')
+
+    plt.tight_layout()
+    
+    return fig, axes
+
+
+def plot_learning_curves(
+    history: dict[str, list[float]],
+    figsize: tuple[float, float] = (10, 4)
+) -> tuple[plt.Figure, np.ndarray]:
+    '''Plot training and validation loss and accuracy curves.
+    
+    Args:
+        history: Dictionary containing 'train_loss', 'val_loss', 
+                 'train_accuracy', and 'val_accuracy' lists.
+        figsize: Figure size (width, height).
+        
+    Returns:
+        Tuple of (figure, axes array).
+    '''
+    fig, axes = plt.subplots(1, 2, figsize=figsize)
+
+    axes[0].set_title('Loss')
+    axes[0].plot(history['train_loss'], label='Train')
+    axes[0].plot(history['val_loss'], label='Validation')
+    axes[0].set_xlabel('Epoch')
+    axes[0].set_ylabel('Loss (cross-entropy)')
+    axes[0].legend(loc='best')
+
+    axes[1].set_title('Accuracy')
+    axes[1].plot(history['train_accuracy'], label='Train')
+    axes[1].plot(history['val_accuracy'], label='Validation')
+    axes[1].set_xlabel('Epoch')
+    axes[1].set_ylabel('Accuracy (%)')
+    axes[1].legend(loc='best')
+
+    plt.tight_layout()
+    
+    return fig, axes
+
+
+def plot_confusion_matrix(
+    true_labels: np.ndarray,
+    predictions: np.ndarray,
+    class_names: list[str],
+    figsize: tuple[float, float] = (8, 8),
+    cmap: str = 'Blues'
+) -> tuple[plt.Figure, plt.Axes]:
+    '''Plot a confusion matrix heatmap.
+    
+    Args:
+        true_labels: Array of true class labels.
+        predictions: Array of predicted class labels.
+        class_names: List of class names for labeling.
+        figsize: Figure size (width, height).
+        cmap: Colormap for the heatmap.
+        
+    Returns:
+        Tuple of (figure, axes).
+    '''
+    from sklearn.metrics import confusion_matrix
+    
+    cm = confusion_matrix(true_labels, predictions)
+    
+    fig, ax = plt.subplots(figsize=figsize)
+
+    ax.set_title('Confusion matrix')
+    im = ax.imshow(cm, cmap=cmap)
+
+    # Add labels
+    ax.set_xticks(range(len(class_names)))
+    ax.set_yticks(range(len(class_names)))
+    ax.set_xticklabels(class_names, rotation=45, ha='right')
+    ax.set_yticklabels(class_names)
+    ax.set_xlabel('Predicted label')
+    ax.set_ylabel('True label')
+
+    # Add text annotations
+    for i in range(len(class_names)):
+        for j in range(len(class_names)):
+            color = 'white' if cm[i, j] > cm.max() / 2 else 'black'
+            ax.text(j, i, str(cm[i, j]), ha='center', va='center', color=color)
+
+    plt.tight_layout()
+    
+    return fig, ax
+
+
+def plot_class_probability_distributions(
+    all_probs: np.ndarray,
+    class_names: list[str],
+    nrows: int = 2,
+    ncols: int = 5,
+    figsize: tuple[float, float] = (12, 4),
+    bins: int = 50,
+    color: str = 'black'
+) -> tuple[plt.Figure, np.ndarray]:
+    '''Plot predicted probability distributions for each class.
+    
+    Args:
+        all_probs: Array of shape (n_samples, n_classes) with predicted probabilities.
+        class_names: List of class names for labeling.
+        nrows: Number of rows in the subplot grid.
+        ncols: Number of columns in the subplot grid.
+        figsize: Figure size (width, height).
+        bins: Number of histogram bins.
+        color: Histogram bar color.
+        
+    Returns:
+        Tuple of (figure, axes array).
+    '''
+    fig, axes = plt.subplots(nrows=nrows, ncols=ncols, figsize=figsize)
+
+    fig.suptitle('Predicted probability distributions by class', fontsize=14, y=1.02)
+    fig.supxlabel('Predicted probability', fontsize=12)
+    fig.supylabel('Count', fontsize=12)
+
+    axes = axes.flatten()
+
+    for i, (ax, class_name) in enumerate(zip(axes, class_names)):
+        # Get probabilities for this class across all samples
+        class_probs = all_probs[:, i]
+        
+        # Plot histogram
+        ax.hist(class_probs, bins=bins, color=color)
+        ax.set_title(class_name)
+        ax.set_xlim(0, 1)
+
+    plt.tight_layout()
+    
+    return fig, axes
+
+
+def plot_evaluation_curves(
+    true_labels: np.ndarray,
+    all_probs: np.ndarray,
+    class_names: list[str],
+    figsize: tuple[float, float] = (12, 5)
+) -> tuple[plt.Figure, tuple[plt.Axes, plt.Axes]]:
+    '''Plot ROC and Precision-Recall curves for multi-class classification.
+    
+    Args:
+        true_labels: Array of true class labels.
+        all_probs: Array of shape (n_samples, n_classes) with predicted probabilities.
+        class_names: List of class names for labeling.
+        figsize: Figure size (width, height).
+        
+    Returns:
+        Tuple of (figure, (ax1, ax2)).
+    '''
+    from sklearn.metrics import roc_curve, auc, precision_recall_curve, average_precision_score
+    from sklearn.preprocessing import label_binarize
+    
+    # Binarize true labels for one-vs-rest evaluation
+    y_test_bin = label_binarize(true_labels, classes=range(len(class_names)))
+
+    # Create figure with ROC and PR curves side by side
+    fig, (ax1, ax2) = plt.subplots(1, 2, figsize=figsize)
+
+    # Plot ROC curves for each class
+    ax1.set_title('ROC curves (one-vs-rest)')
+
+    for i, class_name in enumerate(class_names):
+        fpr, tpr, _ = roc_curve(y_test_bin[:, i], all_probs[:, i])
+        roc_auc = auc(fpr, tpr)
+        ax1.plot(fpr, tpr, label=class_name)
+
+    ax1.plot([0, 1], [0, 1], 'k--', label='Random classifier')
+    ax1.set_xlabel('False positive rate')
+    ax1.set_ylabel('True positive rate')
+    ax1.legend(loc='lower right', fontsize=12)
+    ax1.set_xlim([0, 1])
+    ax1.set_ylim([0, 1.05])
+
+    # Plot Precision-Recall curves for each class
+    ax2.set_title('Precision-recall curves (one-vs-rest)')
+
+    for i, class_name in enumerate(class_names):
+        precision, recall, _ = precision_recall_curve(y_test_bin[:, i], all_probs[:, i])
+        ap = average_precision_score(y_test_bin[:, i], all_probs[:, i])
+        ax2.plot(recall, precision)
+
+    # Random classifier baseline (horizontal line at class prevalence = 1/num_classes)
+    baseline = 1 / len(class_names)
+    ax2.axhline(y=baseline, color='k', linestyle='--')
+
+    ax2.set_xlabel('Recall')
+    ax2.set_ylabel('Precision')
+    ax2.set_xlim([0, 1])
+    ax2.set_ylim([0, 1.05])
+
+    plt.tight_layout()
+    
+    return fig, (ax1, ax2)
+
+
+def plot_optimization_results(
+    study,
+    figsize: tuple[float, float] = (12, 4)
+) -> tuple[plt.Figure, np.ndarray]:
+    '''Plot Optuna optimization history and hyperparameter importance.
+    
+    Args:
+        study: Optuna study object with completed trials.
+        figsize: Figure size (width, height).
+        
+    Returns:
+        Tuple of (figure, axes array).
+    '''
+    import optuna
+    
+    fig, axes = plt.subplots(1, 2, figsize=figsize)
+
+    # Optimization history
+    axes[0].set_title('Optimization History')
+    
+    trial_numbers = [t.number for t in study.trials if t.value is not None]
+    trial_values = [t.value for t in study.trials if t.value is not None]
+
+    axes[0].plot(trial_numbers, trial_values, 'ko-', alpha=0.6)
+    axes[0].axhline(
+        y=study.best_value,
+        color='r', linestyle='--', label=f'Best: {study.best_value:.2f}%'
+    )
+    axes[0].set_xlabel('Trial')
+    axes[0].set_ylabel('Validation Accuracy (%)')
+    axes[0].legend()
+
+    # Hyperparameter importance (if enough trials completed)
+    axes[1].set_title('Hyperparameter Importance')
+    completed_trials = [t for t in study.trials if t.state == optuna.trial.TrialState.COMPLETE]
+
+    if len(completed_trials) >= 5:
+        importance = optuna.importance.get_param_importances(study)
+        params = list(importance.keys())
+        values = list(importance.values())
+        
+        axes[1].set_xlabel('Importance')
+        axes[1].barh(params, values, color='black')
+
+    else:
+        axes[1].text(
+            0.5, 0.5,
+            'Not enough completed trials\nfor importance analysis', 
+            ha='center', va='center', transform=axes[1].transAxes
+        )
+
+    plt.tight_layout()
+    
+    return fig, axes

cifar10_tools/pytorch/training.py

@@ -12,11 +12,28 @@ def train_model(
     criterion: nn.Module,
     optimizer: optim.Optimizer,
     epochs: int = 10,
-    print_every: int = 1
+    print_every: int = 1,
+    device: torch.device | str | None = None
 ) -> dict[str, list[float]]:
     '''Training loop for PyTorch classification model.
     
-    Note: Assumes data is already on the correct device.
+    Handles both pre-loaded GPU data and lazy-loading (CPU data moved per-batch).
+    
+    Args:
+        model: PyTorch model to train.
+        train_loader: DataLoader for training data.
+        val_loader: DataLoader for validation data.
+        criterion: Loss function.
+        optimizer: Optimizer.
+        epochs: Number of training epochs.
+        print_every: Print progress every n epochs.
+        device: Device to move data to per-batch. If None, assumes data is 
+                already on the correct device (GPU pre-loading). If specified,
+                data will be moved to this device per-batch (lazy loading).
+    
+    Returns:
+        Dictionary containing training history with keys:
+        'train_loss', 'val_loss', 'train_accuracy', 'val_accuracy'.
     '''
 
     history = {'train_loss': [], 'val_loss': [], 'train_accuracy': [], 'val_accuracy': []}
@@ -30,6 +47,11 @@ def train_model(
         total = 0
 
         for images, labels in train_loader:
+            
+            # Move to device if lazy loading
+            if device is not None:
+                images = images.to(device, non_blocking=True)
+                labels = labels.to(device, non_blocking=True)
 
             # Forward pass
             optimizer.zero_grad()
@@ -59,6 +81,11 @@ def train_model(
         with torch.no_grad():
 
             for images, labels in val_loader:
+                
+                # Move to device if lazy loading
+                if device is not None:
+                    images = images.to(device, non_blocking=True)
+                    labels = labels.to(device, non_blocking=True)
 
                 outputs = model(images)
                 loss = criterion(outputs, labels)

{cifar10_tools-0.1.0.dist-info → cifar10_tools-0.3.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: cifar10_tools
-Version: 0.1.0
+Version: 0.3.0
 Summary: Tools for training neural networks on the CIFAR-10 task with PyTorch and TensorFlow
 License: GPLv3
 License-File: LICENSE

cifar10_tools-0.3.0.dist-info/RECORD

@@ -0,0 +1,12 @@
+cifar10_tools/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+cifar10_tools/pytorch/__init__.py,sha256=4er-aMGK-MZTlkH3Owz3x-Pz_Gl_NjplKwOBYdBA1p0,909
+cifar10_tools/pytorch/data.py,sha256=09zodpjto0xLq95tDAyq57CFh6MSYRuUBPcMmQcyKZM,626
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