chembfn-webui 1.0.0__py3-none-any.whl → 1.2.0__py3-none-any.whl

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chembfn_webui/bin/app.py CHANGED
@@ -42,7 +42,6 @@ from lib.version import __version__
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  vocabs = find_vocab()
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  models = find_model()
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- lora_selected = False # lora select flag
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  cache_dir = Path(__file__).parent.parent / "cache"
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  HTML_STYLE = gr.InputHTMLAttributes(
@@ -130,13 +129,9 @@ def select_lora(evt: gr.SelectData, prompt: str) -> str:
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  :return: new prompt string
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  :rtype: str
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  """
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- global lora_selected
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- if lora_selected: # avoid double select
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- lora_selected = False
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- return prompt
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  selected_lora = evt.value
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- lora_selected = True
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- if evt.index[1] != 0:
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+ exist_lora = parse_prompt(prompt)["lora"]
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+ if evt.index[1] != 0 or selected_lora in exist_lora:
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  return prompt
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  if not prompt:
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  return f"<{selected_lora}:1>"
@@ -344,7 +339,11 @@ def run(
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  if len(sar_flag) == 1:
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  sar_flag = [sar_flag[0] for _ in range(len(weights))]
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  bfn = EnsembleChemBFN(base_model_dir, lora_dir, mlps, weights)
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- y = [torch.tensor([i], dtype=torch.float32) for i in prompt_info["objective"]]
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+ y = (
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+ [torch.tensor([i], dtype=torch.float32) for i in prompt_info["objective"]]
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+ if prompt_info["objective"]
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+ else None
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+ )
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  if quantise == "on":
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  bfn.quantise()
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  if jited == "on":
@@ -616,7 +615,7 @@ def main() -> None:
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  formatter_class=argparse.ArgumentDefaultsHelpFormatter,
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  )
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  parser.add_argument(
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- "--public", default=False, help="open to public", action="store_true"
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+ "-P", "--public", default=False, help="open to public", action="store_true"
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  )
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  parser.add_argument("-V", "--version", action="version", version=__version__)
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  args = parser.parse_args()
@@ -1 +1 @@
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- CN1CCOCC1c1cccc(C(=O)Nc2ccnn2C(C)C)c1
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+ CC1(CON)CCC(N)CC1
@@ -4,5 +4,5 @@
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  Version info.
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  """
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- __version__ = "1.0.0"
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+ __version__ = "1.2.0"
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  __author__ = "Nianze A. TAO"
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: chembfn_webui
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- Version: 1.0.0
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+ Version: 1.2.0
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  Summary: WebUI for ChemBFN
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  Home-page: https://github.com/Augus1999/ChemBFN-WebUI
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  Author: Nianze A. Tao
@@ -83,6 +83,21 @@ For example,
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  └───moses_selfies_vocab.txt
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  ```
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+ > Note:
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+ >
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+ > >The file `config.json` is automatically saved by CLI tool `Madmol` provided in `bayesianflow-for-chem` package. If you train models via Python API, you need to manually create that file for your models by filling in the tempate:
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+ > >```json
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+ > >{
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+ > > "padding_index": 0,
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+ > > "start_index": 1,
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+ > > "end_index": 2,
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+ > > "padding_strategy": "static",
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+ > > "padding_length": PADDING_LENGTH,
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+ > > "label": [LABEL_NAME_I, LABEL_NAME_II, ...],
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+ > > "name": JOB_NAME
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+ > >}
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+ > >```
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+
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  If placed correctly, all these files can be seen in the "model explorer" tab.
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  > You can use an external folder to host the models if it follows the same structure as [`chembfn_webui/model`](https://github.com/Augus1999/ChemBFN-WebUI/tree/main/chembfn_webui/model). See the next section for the method.
@@ -1,16 +1,16 @@
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  chembfn_webui/__init__.py,sha256=AXUdd_PrlfVO56losFUP7A8XrqCDPylwRbTpe_WG3Uc,87
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- chembfn_webui/bin/app.py,sha256=fqIP5O5aojwZmw2-eHBcuFm4YuQBIEuwOMTvDzW7jcA,21632
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+ chembfn_webui/bin/app.py,sha256=ZyiAYiTFtTUnyrlENqXV9ByDKMi2WtMJPnAMcaKTidM,21612
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  chembfn_webui/cache/cache_file_here.txt,sha256=hi60T_q6Cf5WPtXuwe4CqjiWpaUqrczsmGMhKIUL--M,28
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- chembfn_webui/cache/results.csv,sha256=xdSOWM1GGGJEFS1Y4sfCjA-9-66AECEo6El59_yW1hw,37
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+ chembfn_webui/cache/results.csv,sha256=CaKNQmiX5sbUCdqndjWzllSVi_s9sev8i3Nj0hLJ4LU,17
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  chembfn_webui/lib/utilities.py,sha256=ALPw-Evjd9DdsU_RQA6Zp2Gc6XnRR7Y_5fZrqG9azWo,7460
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- chembfn_webui/lib/version.py,sha256=Mbvn1j2C-hWCKICax3XLfU-P0Q3j0oPQ4GQXoDFJ3fs,138
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+ chembfn_webui/lib/version.py,sha256=EBNxY5E7vFFhf4osZe_mH3SbhzHBV9PM1CC9AQ_7PWc,138
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  chembfn_webui/model/base_model/place_base_model_here.txt,sha256=oa8_ILaAlWpTXICVDi-Y46_OahV7wB6Che6gbiEIh-c,39
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  chembfn_webui/model/lora/place_lora_folder_here.txt,sha256=YYOo0Cj278DyRcgVrCLa1f2Q-cqgNeMnelaLiA3Fuic,69
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  chembfn_webui/model/standalone_model/place_standalone_model_folder_here.txt,sha256=Dp42UscfI0Zp3SnvRv5vOfWiJZnxdY7rG3jo0kf86VM,80
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  chembfn_webui/model/vocab/place_vocabulary_file_here.txt,sha256=fLOINvZP2022oE7RsmfDjgyaw2yMi7glmdu_cTwmo88,28
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- chembfn_webui-1.0.0.dist-info/licenses/LICENSE,sha256=hIahDEOTzuHCU5J2nd07LWwkLW7Hko4UFO__ffsvB-8,34523
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- chembfn_webui-1.0.0.dist-info/METADATA,sha256=iRpNEXoJZRG42fMjyHwsmcUJ5jV0MrGgWUMkZrqUb3s,5897
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- chembfn_webui-1.0.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- chembfn_webui-1.0.0.dist-info/entry_points.txt,sha256=fp8WTPybvwpeYKrUhTi456wwZbmCMJXN1TeFGpR1SlY,55
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- chembfn_webui-1.0.0.dist-info/top_level.txt,sha256=VdWt3Z7jhbB0pQO_mkRawnU5s75SBT9BV8fGaAIJTDI,14
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- chembfn_webui-1.0.0.dist-info/RECORD,,
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+ chembfn_webui-1.2.0.dist-info/licenses/LICENSE,sha256=hIahDEOTzuHCU5J2nd07LWwkLW7Hko4UFO__ffsvB-8,34523
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+ chembfn_webui-1.2.0.dist-info/METADATA,sha256=5OXhUF4QixSdnnSLTJkrLxznBQ8-y8UhCfxA7TzuliA,6412
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+ chembfn_webui-1.2.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ chembfn_webui-1.2.0.dist-info/entry_points.txt,sha256=fp8WTPybvwpeYKrUhTi456wwZbmCMJXN1TeFGpR1SlY,55
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+ chembfn_webui-1.2.0.dist-info/top_level.txt,sha256=VdWt3Z7jhbB0pQO_mkRawnU5s75SBT9BV8fGaAIJTDI,14
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+ chembfn_webui-1.2.0.dist-info/RECORD,,