chanter 0.1.2__py3-none-any.whl → 0.1.4__py3-none-any.whl

chanter/examples/filters/z_HSC.txt

@@ -0,0 +1,76 @@
+8160.00 -0.0011
+8180.00 0.0042
+8200.00 -0.0008
+8220.00 0.0020
+8240.00 -0.0011
+8260.00 -0.0025
+8280.00 0.0061
+8300.00 0.0034
+8320.00 0.0040
+8340.00 0.0045
+8360.00 0.0056
+8380.00 0.0089
+8400.00 0.0210
+8420.00 0.0333
+8440.00 0.0544
+8460.00 0.0824
+8480.00 0.1281
+8500.00 0.1891
+8520.00 0.2546
+8540.00 0.3355
+8560.00 0.4037
+8580.00 0.4649
+8600.00 0.5147
+8620.00 0.5471
+8640.00 0.5697
+8660.00 0.5809
+8680.00 0.5872
+8700.00 0.5888
+8720.00 0.5897
+8740.00 0.5902
+8760.00 0.5902
+8780.00 0.5910
+8800.00 0.5901
+8820.00 0.5883
+8840.00 0.5864
+8860.00 0.5876
+8880.00 0.5874
+8900.00 0.5853
+8920.00 0.5845
+8940.00 0.5770
+8960.00 0.5627
+8980.00 0.5424
+9000.00 0.5335
+9020.00 0.5416
+9040.00 0.5564
+9060.00 0.5466
+9080.00 0.5276
+9100.00 0.5348
+9120.00 0.5416
+9140.00 0.5336
+9160.00 0.5326
+9180.00 0.5228
+9200.00 0.5299
+9220.00 0.5135
+9240.00 0.4886
+9260.00 0.4487
+9280.00 0.3889
+9300.00 0.3104
+9320.00 0.2159
+9340.00 0.1541
+9360.00 0.1108
+9380.00 0.0766
+9400.00 0.0570
+9420.00 0.0330
+9440.00 0.0176
+9460.00 0.0111
+9480.00 0.0074
+9500.00 0.0038
+9520.00 0.0021
+9540.00 0.0012
+9560.00 0.0001
+9580.00 0.0005
+9600.00 -0.0003
+9620.00 -0.0000
+9640.00 0.0004
+9660.00 0.0004

chanter/examples/fit_galaxy_example.py

@@ -0,0 +1,58 @@
+import chanter as ch
+import matplotlib.pyplot as plt
+import numpy as np
+from nautilus import Prior
+import json
+
+# Define the filter curve filepaths
+filt_list = np.loadtxt('filters/filt_list.txt', dtype="str")
+
+# Define the observed photometry (microJy), along with their errors.
+phot_data = np.array(([ [0.00000114, 0.00000011],
+                        [0.00281023, 0.00028102],
+                        [0.03039540, 0.00303954],
+                        [0.04083275, 0.00408327],
+                        [0.06158577, 0.00615858],
+                        [0.08333301, 0.00833330],
+                        [0.15811047, 0.01581105],
+                        [0.63260459, 0.06326046],
+                        [0.96879516, 0.09687952],
+                        [1.15809244, 0.11580924],
+                        [1.30375688, 0.13037569] ]))
+
+# Define the priors for each parameter
+prior = Prior()
+prior.add_parameter("age", dist=(0., 14.))
+prior.add_parameter("tau", dist=(0.1, 15.))
+prior.add_parameter("massformed", dist=(0, 13.))
+prior.add_parameter("Av", dist=(0, 8.))
+prior.add_parameter("redshift", dist=(0., 10.))
+
+# Fit observed photometry
+fitter = ch.galaxyfitter()
+median_instructions, wavs, spectrum_samples, photometry_samples = fitter.fit(phot_data.copy(), prior, filt_list)
+
+# Print the median galaxy parameters
+print(json.dumps(median_instructions, sort_keys=True, indent=4))
+
+# Define figure
+fig, ax = plt.subplots()
+
+# Plot the observed photometry
+filt = ch.utils.filter_set(filt_list)
+effwavs = filt.eff_wavs
+phot_data_erg = phot_data.copy()
+phot_data_erg.T[0] = 2.99792458E-05 * ((1e-6 * phot_data_erg.T[0]) / ((effwavs)**2))
+phot_data_erg.T[1] = 2.99792458E-05 * ((1e-6 * phot_data_erg.T[1]) / ((effwavs)**2))
+ax.errorbar(effwavs, phot_data_erg.T[0], phot_data_erg.T[1], ls='none', marker='D', capsize=3, color='xkcd:cherry', mec='black', mew=1, ecolor='black', zorder=5)
+
+# Plot the fitted model
+ax.plot(wavs,np.median(fitter.spectrum_samples, axis=0), color='darkcyan', alpha=0.5)
+ax.scatter(effwavs,np.median(fitter.photometry_samples, axis=0), color='darkcyan', marker='D')
+ax.set_xlim(100, 50000)
+ax.set_ylim(0,)
+ax.set_ylabel('Observed Flux / erg s$^{-1}$ cm$^{-2}$ Å$^{-1}$')
+ax.set_xlabel('Observed Wavelength / Å')
+plt.show()
+
+

{chanter-0.1.2.dist-info → chanter-0.1.4.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: chanter
-Version: 0.1.2
+Version: 0.1.4
 Summary: Simple quiescent galaxy spectral modelling and fitting
 Author: Struan Stevenson
 Author-email: struan.stevenson@ed.ac.uk

chanter-0.1.4.dist-info/RECORD

@@ -0,0 +1,25 @@
+chanter/__init__.py,sha256=bubSIcCkkzRcatq5ry6iSidWzj4YK8HqTvelHLunHJs,119
+chanter/galaxy_fitter.py,sha256=g_66TJC2TpNudVz6qHOtwDADISWhhFs1v5g3oObNCcA,4201
+chanter/model_galaxy.py,sha256=o_A_hqcIVUPphhQYDIk0fpCCArZZkOHbf3IDtQBCDN4,8789
+chanter/examples/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+chanter/examples/create_galaxy_example.py,sha256=sMTZ8GVk5ZE5LAQQpek8HPB_wp6qC-k0gNthqyImV1w,1046
+chanter/examples/fit_galaxy_example.py,sha256=675bD2gc7qan7qEL1qNo9v4J_UFilPfBqjz8PdDKwJ8,2250
+chanter/examples/filters/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+chanter/examples/filters/filt_list.txt,sha256=C3Q5S1qe-zVj46g-2_pI9IxPtJANTGCH7so3-lhyEL0,340
+chanter/examples/filters/filt_list_jades.txt,sha256=JUvNcaaPC0UkKhc83CaclGwkuv1-BB3SC2Mz0TpkKB0,196
+chanter/examples/filters/g_HSC.txt,sha256=Yi__018s40EAhwniq_ii1iQ39dHnkVryftW5aclYwjU,2805
+chanter/examples/filters/i_HSC.txt,sha256=ghjvJeBhkvroIYBXRZ6Mph4kzobv6nEP-koQ2YMkTb0,8490
+chanter/examples/filters/r_HSC.txt,sha256=NpG2fA2kD0D1-SV3mZRol3a8ZvYcn6B4a0IabfnnUeg,8730
+chanter/examples/filters/y_HSC.txt,sha256=mEFfbEEn1XOsTP2p6RSVrATne5jM_9JnobEE3qirJU8,1566
+chanter/examples/filters/z_HSC.txt,sha256=DdtRyrx4iNU-LyidbCRSilWAJbayncucAOxS0Asz0n4,1146
+chanter/grids/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+chanter/grids/d_igm_grid_inoue14.fits,sha256=T5Fb71OZjOqY9YkdZaEe3zPt1lOQZNoFXTZ-N_Y_Cnc,9843840
+chanter/grids/lyman_series_coefs_inoue_2014_table2.txt,sha256=xFZsQQ8aV27G--iK0WJgBY0idFnNirWduCswT8TJ8y8,2721
+chanter/grids/ssps_5.fits,sha256=Vfr_8DMIoY-IZYTxVhiqP8nFeypVOEJ6FasBUNp52NQ,23480640
+chanter/utils/__init__.py,sha256=hn-ho-lJeT0evKXL1tV5jX0cR4meSlJmPcdxC49cLok,34
+chanter/utils/filter_set.py,sha256=EITLa2c3FG3n1-v7KatKRwHCRyfZ4TTjsi_WM7Bz64k,6819
+chanter/utils/make_igm_grid.py,sha256=nO3NvO-l15oG65mgf48FH3QdatxCfgPT_kqwZzO14CA,10280
+chanter-0.1.4.dist-info/METADATA,sha256=P7rZHAsf-iJCyPndDhU3ZQZapW8Nk2mLYvrIw80sY1Y,1016
+chanter-0.1.4.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+chanter-0.1.4.dist-info/top_level.txt,sha256=Q23dLK1syz0D-XIZ6zeY6TOZ7BQsC-BLqRiVQE7_udk,8
+chanter-0.1.4.dist-info/RECORD,,

chanter-0.1.2.dist-info/RECORD

@@ -1,14 +0,0 @@
-chanter/__init__.py,sha256=bubSIcCkkzRcatq5ry6iSidWzj4YK8HqTvelHLunHJs,119
-chanter/galaxy_fitter.py,sha256=g_66TJC2TpNudVz6qHOtwDADISWhhFs1v5g3oObNCcA,4201
-chanter/model_galaxy.py,sha256=o_A_hqcIVUPphhQYDIk0fpCCArZZkOHbf3IDtQBCDN4,8789
-chanter/grids/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-chanter/grids/d_igm_grid_inoue14.fits,sha256=T5Fb71OZjOqY9YkdZaEe3zPt1lOQZNoFXTZ-N_Y_Cnc,9843840
-chanter/grids/lyman_series_coefs_inoue_2014_table2.txt,sha256=xFZsQQ8aV27G--iK0WJgBY0idFnNirWduCswT8TJ8y8,2721
-chanter/grids/ssps_5.fits,sha256=Vfr_8DMIoY-IZYTxVhiqP8nFeypVOEJ6FasBUNp52NQ,23480640
-chanter/utils/__init__.py,sha256=hn-ho-lJeT0evKXL1tV5jX0cR4meSlJmPcdxC49cLok,34
-chanter/utils/filter_set.py,sha256=EITLa2c3FG3n1-v7KatKRwHCRyfZ4TTjsi_WM7Bz64k,6819
-chanter/utils/make_igm_grid.py,sha256=nO3NvO-l15oG65mgf48FH3QdatxCfgPT_kqwZzO14CA,10280
-chanter-0.1.2.dist-info/METADATA,sha256=40T32lxTtN-G6-hQVvKSoXqTfN3RQ8niOF8FiCVhyCU,1016
-chanter-0.1.2.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-chanter-0.1.2.dist-info/top_level.txt,sha256=Q23dLK1syz0D-XIZ6zeY6TOZ7BQsC-BLqRiVQE7_udk,8
-chanter-0.1.2.dist-info/RECORD,,