chanter 0.0.3__py3-none-any.whl → 0.0.5__py3-none-any.whl

chanter/galaxy_fitter.py

@@ -20,6 +20,7 @@ class galaxyfitter(object):
         model = modelgalaxy(fit_instruc)
         wavs, flux = model.get_spectrum()
         effwavs, phot = model.get_photometry(wavs, flux, filt_files)
+
         return phot
 
     # Liklihood function for a certain point in parameter space
@@ -73,14 +74,13 @@ class galaxyfitter(object):
         # Run fitter
         t0 = time.time()
 
-        print('Computing '+str(id)+'...')
         # Load data
         dat= photdata.T
         dat[0] = 2.99792458E-05 * ((1e-6 * dat[0]) / ((effwavs)**2))
         dat[1] = 2.99792458E-05 * ((1e-6 * dat[1]) / ((effwavs)**2))
 
         # Run the nested sampler over the likelihood function
-        sampler = Sampler(prior, lambda param_dict: self.log_likelihood(dat, self.gen_phot, filt_files, param_dict))
+        sampler = Sampler(prior, lambda param_dict: self.log_likelihood(dat, self.gen_phot, filt_files, param_dict), n_live=1000)
         success = sampler.run(verbose=True, discard_exploration=True, timeout=1800)
 
         # Plot results

chanter/model_galaxy.py

@@ -50,7 +50,7 @@ def resample_igm_grid(wavs):
 hdul = fits.open(os.path.dirname(os.path.realpath(__file__)) + '/grids/ssps.fits')
 master_base = np.array((hdul[1].data, hdul[2].data, hdul[3].data, hdul[4].data, hdul[5].data, hdul[6].data, hdul[7].data))
 
-rest_target_wavs = np.arange(100., 50000., 10.)
+rest_target_wavs = np.arange(100., 50000., 25.)
 grid = resample_ssp_wavs(rest_target_wavs)
 igm_grid = resample_igm_grid(rest_target_wavs)
 
@@ -225,22 +225,25 @@ class modelgalaxy(object):
 
         self.get_spectrum()
 
-        ax.step(self.wavs, self.flux, **kwargs)
+        ax.plot(self.wavs, self.flux, **kwargs)
         ax.set_ylabel('Observed Flux / erg s$^{-1}$ cm$^{-2}$ Å$^{-1}$')
         ax.set_xlabel('Observed Wavelength / Å')
     
 
     
-    def plot_sfh(self):
+    def plot_sfh(self, ax):
         ssp_age = grid[0].T[0, 1:]        
         sfrs = self.sfr(ssp_age, self.fit_instructions["exponential"]["age"], self.fit_instructions["exponential"]["tau"], self.fit_instructions["exponential"]["massformed"])
-        fig, ax = plt.subplots()
+
         ax.set_xlabel('Age / Gyr')
         ax.set_ylabel(' Star Formation / M$_{sun}$ Gyr$^{-1}$')
-        ax.plot((self.universe_age-self.lookback_time) - ssp_age, sfrs/1e9, color='black')
+        ax.plot((self.universe_age-self.lookback_time) - ssp_age, sfrs/1e9, color='black', lw=1)
+        ax.axvline((self.universe_age-self.lookback_time) - ssp_age[0], 0, 1, color='black', ls='dashed', lw=1)
+
+        #ax.plot(-ssp_age, sfrs/1e9, color='black')
         ax.invert_xaxis()
+        ax.set_xlim(self.universe_age,0)
         ax.set_ylim(0, )
-        return fig, ax
     
 
 

chanter-0.0.5.dist-info/METADATA

@@ -0,0 +1,18 @@
+Metadata-Version: 2.4
+Name: chanter
+Version: 0.0.5
+Summary: Simple galaxy spectral modelling and fitting
+Author: Struan Stevenson
+Author-email: struan.stevenson@ed.ac.uk
+Requires-Dist: numpy
+Requires-Dist: astropy
+Requires-Dist: matplotlib
+Requires-Dist: spectres
+Requires-Dist: nautilus-sampler
+Dynamic: author
+Dynamic: author-email
+Dynamic: description
+Dynamic: requires-dist
+Dynamic: summary
+
+CHANTER is a simple galaxy spectral energy distribution (SED) modelling/fitting code, based on the larger BAGPIPES code, of astronomical literary fame. CHANTER provides the barebones of Stellar Population Synthesis (SPS), as well as redshift and dust/IGM attenuation effects, and is written in a simple and digestible format, ideal for learning the theory behind larger spectral fitting software codes.

{chanter-0.0.3.dist-info → chanter-0.0.5.dist-info}/RECORD

@@ -1,11 +1,11 @@
 chanter/__init__.py,sha256=bubSIcCkkzRcatq5ry6iSidWzj4YK8HqTvelHLunHJs,119
-chanter/galaxy_fitter.py,sha256=JYDRc-iW5ZgDHprw4FCshrsBnG8ENvs3MEDNUtlFYxQ,3683
-chanter/model_galaxy.py,sha256=LpgMw23oRsfAH3acS1yx0PKvJxN0LPyAJAQSR0H3FYQ,7832
+chanter/galaxy_fitter.py,sha256=viqrSky3DaO2tC_j4GYxYq5GogZoShWtR5CjUEX5LA0,3655
+chanter/model_galaxy.py,sha256=kYkuEO0VTyr9S84efzHYOoWXaYAp8VYXid6y4QZePaI,7993
 chanter/grids/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 chanter/utils/__init__.py,sha256=hn-ho-lJeT0evKXL1tV5jX0cR4meSlJmPcdxC49cLok,34
 chanter/utils/filter_set.py,sha256=EITLa2c3FG3n1-v7KatKRwHCRyfZ4TTjsi_WM7Bz64k,6819
 chanter/utils/make_igm_grid.py,sha256=s9NeRmgOsj_OxvxXixIdPSSQZPlsLcPedIRr4soZUcU,10304
-chanter-0.0.3.dist-info/METADATA,sha256=AoXqJlWkuelZZRVB5TqGcpbLNHMMueeW0qwp_wsXXR0,353
-chanter-0.0.3.dist-info/WHEEL,sha256=In9FTNxeP60KnTkGw7wk6mJPYd_dQSjEZmXdBdMCI-8,91
-chanter-0.0.3.dist-info/top_level.txt,sha256=Q23dLK1syz0D-XIZ6zeY6TOZ7BQsC-BLqRiVQE7_udk,8
-chanter-0.0.3.dist-info/RECORD,,
+chanter-0.0.5.dist-info/METADATA,sha256=Q-RRZsxKqDtJ0u40IIQDSNqun3bCq8NJmNImURTCyZE,799
+chanter-0.0.5.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+chanter-0.0.5.dist-info/top_level.txt,sha256=Q23dLK1syz0D-XIZ6zeY6TOZ7BQsC-BLqRiVQE7_udk,8
+chanter-0.0.5.dist-info/RECORD,,

{chanter-0.0.3.dist-info → chanter-0.0.5.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (75.8.0)
+Generator: setuptools (80.9.0)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

chanter-0.0.3.dist-info/METADATA

@@ -1,15 +0,0 @@
-Metadata-Version: 2.2
-Name: chanter
-Version: 0.0.3
-Summary: Galaxy spectral fitting
-Author: Struan Stevenson
-Author-email: struan.stevenson@ed.ac.uk
-Requires-Dist: numpy
-Requires-Dist: astropy
-Requires-Dist: matplotlib
-Requires-Dist: spectres
-Requires-Dist: nautilus-sampler
-Dynamic: author
-Dynamic: author-email
-Dynamic: requires-dist
-Dynamic: summary