cellonator 0.1.0__py3-none-any.whl
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cellonator/__init__.py
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from .annot import annotate
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cellonator/annot.py
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import os
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import pandas as pd
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def annotate(df):
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"""
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Accepts a DataFrame of cell counts of shape (cell x gene).
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"""
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all_items = []
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path = "/"
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try:
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if os.path.exists(path) and os.path.isdir(path):
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# Get the contents and add to our master list
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items = os.listdir(path)
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all_items.extend(items)
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else:
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all_items.append(f"Error: {path} is not a valid directory")
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except Exception as e:
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all_items.append(f"Error accessing {path}: {e}")
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# Convert the flat list into a Pandas Series
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return pd.Series(all_items, name="directory_contents")
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if __name__ == "__main__":
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data = {
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'folder_paths': ['./my_docs', './downloads']
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}
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input_df = pd.DataFrame(data)
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file_series = get_directory_series(input_df)
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print(file_series)
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Metadata-Version: 2.4
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Name: cellonator
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Version: 0.1.0
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Summary: A cell type annotation package
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Author: Me
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Author-email: me@mail.email
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License: BSD 2-clause
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Classifier: Development Status :: 1 - Planning
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Classifier: Intended Audience :: Science/Research
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Classifier: License :: OSI Approved :: BSD License
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Classifier: Operating System :: POSIX :: Linux
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Classifier: Programming Language :: Python :: 3.11
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Requires-Dist: pandas
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Dynamic: author
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Dynamic: author-email
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Dynamic: classifier
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Dynamic: license
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Dynamic: requires-dist
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Dynamic: summary
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cellonator/__init__.py,sha256=_bn-NPT2-knjHbiwPhoY1HR9dretEoCOcPGy2mVUxYQ,28
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cellonator/annot.py,sha256=jQPhOrHtqf7oKEcrL0Lxplr-h-La7qQHfADMJydPBas,848
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cellonator-0.1.0.dist-info/METADATA,sha256=EVrSGBUfibq-KSi2kAcSn7vvIyD8S9XR7BpH7JqZYCA,538
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cellonator-0.1.0.dist-info/WHEEL,sha256=JNWh1Fm1UdwIQV075glCn4MVuCRs0sotJIq-J6rbxCU,109
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cellonator-0.1.0.dist-info/top_level.txt,sha256=0l6PMpu_Hy3IMx83XmFGMMX5iZw7PpasAyb-3LyPoAs,11
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cellonator-0.1.0.dist-info/RECORD,,
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cellonator
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