celldetective 1.5.0b12__py3-none-any.whl → 1.5.0b14__py3-none-any.whl

celldetective/_version.py

@@ -1 +1 @@
-__version__ = "1.5.0b12"
+__version__ = "1.5.0b14"

celldetective/gui/layouts/local_correction_layout.py

@@ -5,6 +5,7 @@ from celldetective import get_logger
 
 logger = get_logger(__name__)
 
+
 class LocalCorrectionLayout(BackgroundFitCorrectionLayout):
     """docstring for ClassName"""
 
@@ -57,11 +58,12 @@ class LocalCorrectionLayout(BackgroundFitCorrectionLayout):
                 n_channels=len(self.channel_names),
                 target_channel=self.channels_cb.currentIndex(),
                 edge_range=(0, 30),
-                initial_edge=int(thresh),
+                initial_edge=-int(thresh),
                 invert=True,
                 window_title="Set an edge distance to estimate local intensity",
                 channel_cb=False,
                 PxToUm=1,
+                single_value_mode=True,
             )
             self.viewer.show()
 

celldetective/gui/viewers/contour_viewer.py

@@ -198,7 +198,12 @@ class CellEdgeVisualizer(StackVisualizer):
     def set_measurement_in_parent_le(self):
         # Set the edge size in the parent QLineEdit
 
-        self.parent_le.setText(str(int(self.edge_slider.value())))
+        slider_val = self.edge_slider.value()
+        if isinstance(slider_val, tuple):
+            val = max(abs(slider_val[0]), abs(slider_val[1]))
+            self.parent_le.setText(str(int(val)))
+        else:
+            self.parent_le.setText(str(int(slider_val)))
         self.close()
 
     def set_measurement_in_parent_list(self):

celldetective/utils/parsing.py

@@ -392,6 +392,11 @@ def extract_cols_from_query(query: str):
     # 2. Remove backtick sections so they don't get double-counted
     cleaned_query = re.sub(backtick_pattern, "", query)
 
+    # 2b. Remove quoted strings (double and single quotes) so string literals
+    #     like "W1" or 'W1' are not mistakenly parsed as column names
+    cleaned_query = re.sub(r'"[^"]*"', "", cleaned_query)
+    cleaned_query = re.sub(r"'[^']*'", "", cleaned_query)
+
     # 3. Extract bare identifiers from the remaining string
     identifier_pattern = r"\b([A-Za-z_]\w*)\b"
     bare = set(re.findall(identifier_pattern, cleaned_query))

{celldetective-1.5.0b12.dist-info → celldetective-1.5.0b14.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: celldetective
-Version: 1.5.0b12
+Version: 1.5.0b14
 Summary: description
 Home-page: http://github.com/remyeltorro/celldetective
 Author: Rémy Torro

{celldetective-1.5.0b12.dist-info → celldetective-1.5.0b14.dist-info}/RECORD

@@ -1,6 +1,6 @@
 celldetective/__init__.py,sha256=LfnOyfUnYPGDc8xcsF_PfYEL7-CqAb7BMBPBIWGv84o,666
 celldetective/__main__.py,sha256=Rzzu9ArxZSgfBVjV-lyn-3oanQB2MumQR6itK5ZaRpA,2597
-celldetective/_version.py,sha256=qIUsLw55S96fJBnnxozjZGAVdxWEUHBpoXhNTU6Jdh0,25
+celldetective/_version.py,sha256=amPopcQgtkLsO4PonyHRn3RcuDFQrei6x9QLnJip2sE,25
 celldetective/event_detection_models.py,sha256=A7ZJFhJwfdhzfxJ-YZIj6IoI9Gc1hyAodFkKt8kNxDk,93549
 celldetective/events.py,sha256=n15R53c7QZ2wT8gjb0oeNikQbuRBrVVbyNsRCqXjzXA,8166
 celldetective/exceptions.py,sha256=f3VmIYOthWTiqMEV5xQCox2rw5c5e7yog88h-CcV4oI,356
@@ -64,7 +64,7 @@ celldetective/gui/help/tracking.json,sha256=yIAoOToqCSQ_XF4gwEZCcyXcvQ3mROju263Z
 celldetective/gui/layouts/__init__.py,sha256=Rm0i-juuITLlBLyvwaLaOCY9yyWV4OCKp8uVc89rQps,320
 celldetective/gui/layouts/background_model_free_layout.py,sha256=YvuO2YmHxDTuPxIwfuVsNrO_uM3TQCiFvZFT_6diBaI,20332
 celldetective/gui/layouts/channel_offset_layout.py,sha256=DKn0HKSVg_44khxopUz55YQoLxccMM84fmyH8H88n-c,5133
-celldetective/gui/layouts/local_correction_layout.py,sha256=oSRPYYMHsYvafxmBQ7oFTP9UajuD0cH276sO9pd4wVY,3136
+celldetective/gui/layouts/local_correction_layout.py,sha256=NG708MKI9ghFdcDrh32BG_jE8tAL2C2q9uDQe9F94Qw,3178
 celldetective/gui/layouts/model_fit_layout.py,sha256=7rxwYKaV9YaMuJljjx2oDvlF38fgd7nvWM5rCxFV_QA,14474
 celldetective/gui/layouts/operation_layout.py,sha256=mdUPEdoViFlvLy05-XP9lQyN6-MlEx3EcbbQbovUONs,2381
 celldetective/gui/layouts/protocol_designer_layout.py,sha256=JkEbUiYOHSPV08hYIC8_g2Znj4IznTYO-ui-iR_F9Us,3344
@@ -90,7 +90,7 @@ celldetective/gui/table_ops/_rename_col.py,sha256=UAgDSpXJo_h4pLJpHaNc2w2VhbaW4D
 celldetective/gui/viewers/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 celldetective/gui/viewers/base_viewer.py,sha256=Wn4na79xRL1R6PSXIoE_UabxJNtNQ-Y5l9Q-HSb508c,32013
 celldetective/gui/viewers/channel_offset_viewer.py,sha256=cywBkxyMPyKIuwZTGA03DBSS4a-H1SAohMJYOPISLEE,16289
-celldetective/gui/viewers/contour_viewer.py,sha256=gRAVkwIrAQKN9hFbWNYOO8RDOw50l92owIvDM1q5Cno,15360
+celldetective/gui/viewers/contour_viewer.py,sha256=i5kjk57KjgGWwLPityLYnLuUiH0gG60Rz08oohQJM1A,15564
 celldetective/gui/viewers/size_viewer.py,sha256=uXITjaxg5dhQ09Q6TNUxwLxi-ZglyGFcxEH1RtGIZWw,6020
 celldetective/gui/viewers/spot_detection_viewer.py,sha256=JSo6tpb7qBxGjUzUXQ-Zi4uts74eVZ2gxUdD67yhQ4A,17195
 celldetective/gui/viewers/threshold_viewer.py,sha256=F-13JF2wFhyvvKfUvgRcSjWL3leAliOXy5yUergndnE,12000
@@ -158,7 +158,7 @@ celldetective/utils/maths.py,sha256=pbbWWYNIHTnIBiaR2kJHPDaTPO0rpmQSPjHB7liUSG0,
 celldetective/utils/model_getters.py,sha256=jVq9FhAF-xUmFOETWP6hByhoWgapmJGlNmSK11fQ69g,11370
 celldetective/utils/model_loaders.py,sha256=CjScJBGtnenb8qRMZkEozdj1-ULYHvsDFS4AVgYbB5s,10576
 celldetective/utils/normalization.py,sha256=SN-nrycZtmtqv8v1S9bAKvDTGiN6cQKfryitwNtH1bA,15635
-celldetective/utils/parsing.py,sha256=1zpIH9tyULCRmO5Kwzy6yA01fqm5uE_mZKYtondy-VA,14443
+celldetective/utils/parsing.py,sha256=1yu2dZWY7E2qmeJXW2btG39Chqlb78og7ye3GV9GrvE,14708
 celldetective/utils/resources.py,sha256=3Fz_W0NYWl_Ixc2AjEmkOv5f7ejXerCLJ2z1iWhGWUI,1153
 celldetective/utils/stats.py,sha256=4TVHRqi38Y0sed-izaMI51sMP0fd5tC5M68EYyfJjkE,3636
 celldetective/utils/types.py,sha256=lRfWSMVzTkxgoctGGp0NqD551akuxu0ygna7zVGonTg,397
@@ -167,7 +167,7 @@ celldetective/utils/event_detection/__init__.py,sha256=GvsdyQLMTXJj1S_FfRXjrpOxE
 celldetective/utils/plots/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 celldetective/utils/plots/regression.py,sha256=oUCn29-hp7PxMqC-R0yoL60KMw5ZWpZAIoCDh2ErlcY,1764
 celldetective/utils/stardist_utils/__init__.py,sha256=SY2kxFNXSRjXN4ncs3heDdXT3UNk8M3dELJQySysAf4,4231
-celldetective-1.5.0b12.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
+celldetective-1.5.0b14.dist-info/licenses/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
 tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 tests/test_cellpose_fallback.py,sha256=BJZTDFF8sFR1x7rDbvZQ2RQOB1OP6wuFBRfc8zbl5zw,3513
 tests/test_contour_format.py,sha256=N11Rue_mxxwsZBhocRA621bpt4Cps-1DnPGzhKLSq9o,10873
@@ -184,15 +184,17 @@ tests/test_signals.py,sha256=upfhDyQMquOOKuYf7a34TglimHK74oYWQ9RyuK7Mg7c,4285
 tests/test_tracking.py,sha256=_YLjwQ3EChQssoHDfEnUJ7fI1yC5KEcJsFnAVR64L70,18909
 tests/test_utils.py,sha256=aSB_eMw9fzTsnxxdYoNmdQQRrXkWqBXB7Uv4TGU6kYE,4778
 tests/gui/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+tests/gui/test_classifier_widget.py,sha256=dnzTewwgbZ8h8mmO32wN6kqxIkznDZnkE2RljdxJrxE,27037
 tests/gui/test_enhancements.py,sha256=3x9au_rkQtMZ94DRj3OaEHKPr511RrWqBAUAcNQn1ys,13453
 tests/gui/test_event_annotator_cleanup.py,sha256=nIFWqC3za06VF5n8EDnK-URbir2WiXzECBeNaVNS_FI,11226
 tests/gui/test_measure_annotator_bugfix.py,sha256=tPfgWNKC0UkvrVssSrUcVDC1qgpzx6l2yCqvKtKYkM4,4544
+tests/gui/test_measurement_settings.py,sha256=1ecJeKmgff5J9yRETlVWJOHjvjNitaUv2E1HmvuXXqo,40756
 tests/gui/test_new_project.py,sha256=wRjW2vEaZb0LWT-f8G8-Ptk8CW9z8-FDPLpV5uqj6ck,8778
 tests/gui/test_project.py,sha256=KzAnodIc0Ovta0ARL5Kr5PkOR5euA6qczT_GhEZpyE4,4710
 tests/gui/test_spot_detection_viewer.py,sha256=mCEsfTAJb5W5IeLyQmaZXq9Sjr8ehCI552RkiCEQvLw,13355
 tests/gui/test_tableui_track_collapse.py,sha256=SA2Ot3wcW64nziK260QaaXY22_VEbJFbUfBVDNte7Us,6831
-celldetective-1.5.0b12.dist-info/METADATA,sha256=qa3l5N4UgS1dt9Nlhs8PxMmxHDBk-K1yzlBRtCsRHXs,11524
-celldetective-1.5.0b12.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
-celldetective-1.5.0b12.dist-info/entry_points.txt,sha256=2NU6_EOByvPxqBbCvjwxlVlvnQreqZ3BKRCVIKEv3dg,62
-celldetective-1.5.0b12.dist-info/top_level.txt,sha256=6rsIKKfGMKgud7HPuATcpq6EhdXwcg_yknBVWn9x4C4,20
-celldetective-1.5.0b12.dist-info/RECORD,,
+celldetective-1.5.0b14.dist-info/METADATA,sha256=ZtE6pGNjG4ElXzsZny820TVk0vh3TwcEr1xC-fLWSyY,11524
+celldetective-1.5.0b14.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
+celldetective-1.5.0b14.dist-info/entry_points.txt,sha256=2NU6_EOByvPxqBbCvjwxlVlvnQreqZ3BKRCVIKEv3dg,62
+celldetective-1.5.0b14.dist-info/top_level.txt,sha256=6rsIKKfGMKgud7HPuATcpq6EhdXwcg_yknBVWn9x4C4,20
+celldetective-1.5.0b14.dist-info/RECORD,,