celldetective 1.3.0.post1__py3-none-any.whl → 1.3.1__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (24) hide show
  1. celldetective/_version.py +1 -1
  2. celldetective/events.py +86 -11
  3. celldetective/extra_properties.py +5 -1
  4. celldetective/gui/InitWindow.py +35 -9
  5. celldetective/gui/classifier_widget.py +50 -22
  6. celldetective/gui/layouts.py +128 -7
  7. celldetective/gui/measurement_options.py +3 -3
  8. celldetective/gui/process_block.py +46 -12
  9. celldetective/gui/retrain_segmentation_model_options.py +24 -10
  10. celldetective/gui/survival_ui.py +19 -2
  11. celldetective/gui/viewers.py +263 -3
  12. celldetective/links/zenodo.json +136 -123
  13. celldetective/models/tracking_configs/biased_motion.json +68 -0
  14. celldetective/models/tracking_configs/no_z_motion.json +202 -0
  15. celldetective/preprocessing.py +172 -3
  16. celldetective/signals.py +5 -2
  17. celldetective/tracking.py +7 -3
  18. celldetective/utils.py +6 -6
  19. {celldetective-1.3.0.post1.dist-info → celldetective-1.3.1.dist-info}/METADATA +3 -3
  20. {celldetective-1.3.0.post1.dist-info → celldetective-1.3.1.dist-info}/RECORD +24 -22
  21. {celldetective-1.3.0.post1.dist-info → celldetective-1.3.1.dist-info}/WHEEL +1 -1
  22. {celldetective-1.3.0.post1.dist-info → celldetective-1.3.1.dist-info}/LICENSE +0 -0
  23. {celldetective-1.3.0.post1.dist-info → celldetective-1.3.1.dist-info}/entry_points.txt +0 -0
  24. {celldetective-1.3.0.post1.dist-info → celldetective-1.3.1.dist-info}/top_level.txt +0 -0
{celldetective-1.3.0.post1.dist-info → celldetective-1.3.1.dist-info}/RECORD RENAMED
@@ -1,48 +1,48 @@
1
1
  celldetective/__init__.py,sha256=bi3SGTMo6s2qQBsJAaKy-a4xaGcTQVW8zsqaiX5XKeY,139
2
2
  celldetective/__main__.py,sha256=_H9B620ntENFx9RBvlV6ybxpvtHzCbv5NnIPmDBr9Z0,1127
3
- celldetective/_version.py,sha256=psRKPA5pfVLLl8tIZkft2nS2RjrlphliNDLiwS7_UEA,28
4
- celldetective/events.py,sha256=hPnGSeQtQEwLM7Ks9_7AnuXgEVjQXD_LZeoayE4v7x0,4847
5
- celldetective/extra_properties.py,sha256=8DkxTvVs7gASsnnGurVZ3_zt6uR0pvvJhBKO2LC6hGk,5118
3
+ celldetective/_version.py,sha256=-ypEJktJToAL9by62JJKWEzDo_KPCQtmE5kwFgX24z4,22
4
+ celldetective/events.py,sha256=YI31GRGQhKlNHY5lljme2j2uhnSSmq2Y07Kzm6zReTI,7967
5
+ celldetective/extra_properties.py,sha256=88JtyoY883ibon-rqtCX_BCHOpo0MTGfiLciIR7jM24,5176
6
6
  celldetective/filters.py,sha256=b0qKwHor1fvNA_dHovP17nQz8EsW5YlyhT2TJnayn08,3615
7
7
  celldetective/io.py,sha256=erGKB0ALcLe5ffuo7pkuACDBC2DR-ZBmJHUcKfCLkrM,86442
8
8
  celldetective/measure.py,sha256=S2aEhAAdwNk2p2d8rGG78MoN1g19zTUxYQhCQ-febQI,56328
9
9
  celldetective/neighborhood.py,sha256=GjF_fTmtcU8jq5XZT-DnDSp28VDTrsaHjIGJG7W2Ppk,52799
10
- celldetective/preprocessing.py,sha256=iV5or20s8XPJXQZDsWzis7OBaqzPDyAo_cwcDVDuX5A,38188
10
+ celldetective/preprocessing.py,sha256=WmetQCgmHK6fo8AuwESPLab05WgeIy8ElBs-9KM-Cco,44081
11
11
  celldetective/relative_measurements.py,sha256=qPHC6gtUaICNGKh6Qfh8y6NA4OUJauGcaj9_TUbrswg,24998
12
12
  celldetective/segmentation.py,sha256=NjAVaVpZufpJ-LIvBx5UFH6j5kjRKE6EVLjttDrqaqs,30826
13
- celldetective/signals.py,sha256=485axzJwE3xsSsN4AmBQlZ2at7uWu9QRg0XrUHvLBUE,120552
14
- celldetective/tracking.py,sha256=HGeOtfQ-nmpaea9_Q-sq2WcwZfdPXRH028JyFlt6eUs,37901
15
- celldetective/utils.py,sha256=4Nf6jGMdd6kOcF3z0Q_3J8LLZ7Y3fOJKYUwGzUlzk3Q,88768
13
+ celldetective/signals.py,sha256=8D6n_NdVqP9Jdj6O3rcFUwombcRs0RvxrFYuRaGDASU,120626
14
+ celldetective/tracking.py,sha256=zZ9J1plUCTjKuK4HAPiuj3BysoR6hLehqYVsBEqhCnk,37995
15
+ celldetective/utils.py,sha256=siulFFTVD-KxPQJEL-lwuUqlKjCi6PbtxXO3v2wJYAs,88774
16
16
  celldetective/datasets/segmentation_annotations/blank,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
17
17
  celldetective/datasets/signal_annotations/blank,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
18
- celldetective/gui/InitWindow.py,sha256=M0v58BmOuZ05em2WSXHpDar3tp2AeS6pr44ZBtiYz-4,13683
18
+ celldetective/gui/InitWindow.py,sha256=OyEyWF6KJ4YzGK-8ZeMwYmPEG1maHcHlxmdsCJyUiEs,14963
19
19
  celldetective/gui/__init__.py,sha256=2_r2xfOj4_2xj0yBkCTIfzlF94AHKm-j6Pvpd7DddQc,989
20
20
  celldetective/gui/about.py,sha256=FJZrj6C-p6uqp_3UaprKosuW-Sw9_HPNQAvFbis9Gdk,1749
21
21
  celldetective/gui/analyze_block.py,sha256=sat8RECEeZxlaconZZIxI0IrIjwJo121PcBXqJmA1-o,24756
22
22
  celldetective/gui/btrack_options.py,sha256=OrvbG5coZhLRk5jtXiLFJu34z1hWHN9kHkBiZ7XMZoI,39269
23
- celldetective/gui/classifier_widget.py,sha256=cjCuBGvNPI9OQeBeLlLI2h9mDUHHslWkJRjn4JIuVOw,16098
23
+ celldetective/gui/classifier_widget.py,sha256=2dTOyJYIG6KXr0zHDSPMaJIX0BtGnAiy63jwQVE0fqw,16826
24
24
  celldetective/gui/configure_new_exp.py,sha256=Eyr-M4FH-4xrUJbIGNdKXAtXb_ULr8lCol26JSzXEww,20125
25
25
  celldetective/gui/control_panel.py,sha256=JbS47IFeVHc1D2olWiUB_Lo9Bn20QJCPVwhXnRdlFec,18990
26
26
  celldetective/gui/generic_signal_plot.py,sha256=OzlFr2RxspkyxW1YIhl_c3q63RXAngMPouYPhEtk0S0,29509
27
27
  celldetective/gui/gui_utils.py,sha256=afqJTeVyMa49QEbSmT0hAiXGd7EiKzckOD5tMvUr-aY,27901
28
28
  celldetective/gui/json_readers.py,sha256=Su3angSobroeGrrumGgQcs3Cr_9l9p52-Hfm3qneVcI,3664
29
- celldetective/gui/layouts.py,sha256=feeAYh7I21ZgH-x4I7lg2DAvz5PBm71D7MovCrtb9QE,47325
30
- celldetective/gui/measurement_options.py,sha256=0CAxM61NqfWVsBaHD1cuC04kMER96-Tgom1p8G5X7Qg,39249
29
+ celldetective/gui/layouts.py,sha256=f_MoRPtl6e1UAsSTVidCSNk4_hoz1me_Z1KFaia29TQ,51783
30
+ celldetective/gui/measurement_options.py,sha256=jc0_RGpbCB3BhDWjqKFBP4j5ncTSIKUz8In7ae306vE,39288
31
31
  celldetective/gui/neighborhood_options.py,sha256=BvWwsIX1KWogUgHWRZptqY3ZRmH1aj7r8tiLmbRFhW4,19783
32
32
  celldetective/gui/plot_measurements.py,sha256=SBFkY3542hW4H_vllOCMxMOgBz09KUE2FLhhgI8avXk,51024
33
33
  celldetective/gui/plot_signals_ui.py,sha256=dQINAOyOmAOHMfmjfCsx1hJ7HGeCgNCq8kESuADbQqo,15864
34
- celldetective/gui/process_block.py,sha256=PdgKKEfr-GFad3P1y0n9LB_OaIBvuBuaQdBRtzRNhDg,72245
35
- celldetective/gui/retrain_segmentation_model_options.py,sha256=eGGrimwmNfJXRPRpZ6NZ74TWx6TK70HoNRHnJl1_8XQ,22292
34
+ celldetective/gui/process_block.py,sha256=S6oYEoq1S8NejwzHDt6oKlheG3fGzRIjgkcKGeRKJnc,73700
35
+ celldetective/gui/retrain_segmentation_model_options.py,sha256=jYD9AWzDPacUgaBv9l6ldQxXNZb3BD4EwJc-0t02jXw,23207
36
36
  celldetective/gui/retrain_signal_model_options.py,sha256=XigNdGlNu3KWB_MYBcKQhfXjcWwVZNMmu0qmxNoo14E,21919
37
37
  celldetective/gui/seg_model_loader.py,sha256=vWvPMU6nkTiQfI-x2WjQHrdJGFdV4a4Ne-4YIOq_YZ8,18153
38
38
  celldetective/gui/signal_annotator.py,sha256=z205XhTZjKPo9L4lzt-g-uLiu9vk6V1w5zUlxu3bWqQ,87379
39
39
  celldetective/gui/signal_annotator2.py,sha256=Y43JSCg3bO_QL7zsqdeQ-FY8TNq_5WiV1cHO-knK0QE,109375
40
40
  celldetective/gui/signal_annotator_options.py,sha256=ztFFgA70SJ0QkntxYGsgDNCvSuSR5GjF7_J6pYVYc1g,11020
41
41
  celldetective/gui/styles.py,sha256=fup0_U1Zk0IJAjyruHde_r-X7d7cTMcrpPLPl-HuKAM,4820
42
- celldetective/gui/survival_ui.py,sha256=tzvtI0eC0bgd7Lfm20HqU7rfCJ60gy9a_Sc9cZLSKhs,9439
42
+ celldetective/gui/survival_ui.py,sha256=poPKBn8XpkYw3OkCEHjtJ5MvCRz0D2vhQcTYi1zWFEo,10171
43
43
  celldetective/gui/tableUI.py,sha256=sHmXjRhMYjYY4qCrUyMKZf4O-PorvJuMzHbVwshSNVs,46167
44
44
  celldetective/gui/thresholds_gui.py,sha256=t1hTDdaJTJWHBt9vtRCE4B1TsVHhobQwCpKfntVgaQI,50510
45
- celldetective/gui/viewers.py,sha256=mCyE9DaUX2rGq65oYEwyEfNtEUPrHdoFNg2MRp1kXs4,27701
45
+ celldetective/gui/viewers.py,sha256=rQWJoE45uncNl8-_ktNPnzxvx_Rm8MN3LIawZtWfusU,37723
46
46
  celldetective/gui/help/DL-segmentation-strategy.json,sha256=59jVtn8pECbCqPQwJifgViVYTF1AxLQDIkNJMS7CJuk,1143
47
47
  celldetective/gui/help/Threshold-vs-DL.json,sha256=SELQk3qF8xcwmkX686Bqrr7i5KiXqN7r4jbUydCLRDU,603
48
48
  celldetective/gui/help/cell-populations.json,sha256=wP0ekhokb9oHE3XqOQrC5ARewNgOlv0GJrQeVQyMJzg,1075
@@ -63,13 +63,15 @@ celldetective/icons/splash0.png,sha256=qVXsrYUinm5g6-vbHcqwyjh8SIqs9lEqPWnPa1Wij
63
63
  celldetective/icons/survival2.png,sha256=8zsualD7d9VPAecoFA4Om9TFARErqpJzMg6U7XANXf4,4479
64
64
  celldetective/icons/vignette_signals2.png,sha256=hsVOdQDpEfMGM45aaSeacEm3lvxbquRKKYutiS9qoS0,20743
65
65
  celldetective/icons/vignette_signals2.svg,sha256=muGNcQudV1jG-bmFd9FwV-Wb8PcrRV5osdZ7pHR7Ekk,5947
66
- celldetective/links/zenodo.json,sha256=qxbRAWRRXgeM4GMPhcvuRFWviI_W0pwovQOq_k5I6Uw,30216
66
+ celldetective/links/zenodo.json,sha256=puCKI6vQi_L_7H70Nii_UzIqRcYVWUQGRKpTulyoHPo,30549
67
67
  celldetective/models/pair_signal_detection/blank,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
68
68
  celldetective/models/segmentation_effectors/blank,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
69
69
  celldetective/models/segmentation_generic/blank,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
70
70
  celldetective/models/segmentation_targets/blank,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
71
71
  celldetective/models/signal_detection/blank,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
72
+ celldetective/models/tracking_configs/biased_motion.json,sha256=RZa-ZCP4jbFtMVz-M4lf1LtqmAvBrUxIhhudNiU1jtY,1782
72
73
  celldetective/models/tracking_configs/mcf7.json,sha256=iDjb8i6yxs0GleW39dvY3Ld5bZJatlXJrwI8PG3vCT0,1780
74
+ celldetective/models/tracking_configs/no_z_motion.json,sha256=b4RWOJ0w6Y2e0vJYwKMyOexedeL2eA8fEDbSzbNmB4A,2702
73
75
  celldetective/models/tracking_configs/ricm.json,sha256=L-vmwCR1f89U-qnH2Ms0cBfPFR_dxIWoe2ccH8V-QBA,2727
74
76
  celldetective/models/tracking_configs/ricm2.json,sha256=DDjJ6ScYcDWvlsy7ujPID8v8H28vcNcMuZmNR8XmGxo,2718
75
77
  celldetective/scripts/analyze_signals.py,sha256=YE05wZujl2hQFWkvqATBcCx-cAd_V3RxnvKoh0SB7To,2194
@@ -92,9 +94,9 @@ tests/test_segmentation.py,sha256=k1b_zIZdlytEdJcHjAUQEO3gTBAHtv5WvrwQN2xD4kc,34
92
94
  tests/test_signals.py,sha256=No4cah6KxplhDcKXnU8RrA7eDla4hWw6ccf7xGnBokU,3599
93
95
  tests/test_tracking.py,sha256=8hebWSqEIuttD1ABn-6dKCT7EXKRR7-4RwyFWi1WPFo,8800
94
96
  tests/test_utils.py,sha256=NKRCAC1d89aBK5cWjTb7-pInYow901RrT-uBlIdz4KI,3692
95
- celldetective-1.3.0.post1.dist-info/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
96
- celldetective-1.3.0.post1.dist-info/METADATA,sha256=QzPTXc4_K4xgHDJ60xC7CaHbejQ9wjSXGwOEGj1LYrc,9971
97
- celldetective-1.3.0.post1.dist-info/WHEEL,sha256=GV9aMThwP_4oNCtvEC2ec3qUYutgWeAzklro_0m4WJQ,91
98
- celldetective-1.3.0.post1.dist-info/entry_points.txt,sha256=2NU6_EOByvPxqBbCvjwxlVlvnQreqZ3BKRCVIKEv3dg,62
99
- celldetective-1.3.0.post1.dist-info/top_level.txt,sha256=6rsIKKfGMKgud7HPuATcpq6EhdXwcg_yknBVWn9x4C4,20
100
- celldetective-1.3.0.post1.dist-info/RECORD,,
97
+ celldetective-1.3.1.dist-info/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
98
+ celldetective-1.3.1.dist-info/METADATA,sha256=OxGpdo-I-QqAkc69wATNBWIQ6YtEGgWaCsKemDri8Pc,9969
99
+ celldetective-1.3.1.dist-info/WHEEL,sha256=P9jw-gEje8ByB7_hXoICnHtVCrEwMQh-630tKvQWehc,91
100
+ celldetective-1.3.1.dist-info/entry_points.txt,sha256=2NU6_EOByvPxqBbCvjwxlVlvnQreqZ3BKRCVIKEv3dg,62
101
+ celldetective-1.3.1.dist-info/top_level.txt,sha256=6rsIKKfGMKgud7HPuATcpq6EhdXwcg_yknBVWn9x4C4,20
102
+ celldetective-1.3.1.dist-info/RECORD,,
{celldetective-1.3.0.post1.dist-info → celldetective-1.3.1.dist-info}/WHEEL RENAMED
@@ -1,5 +1,5 @@
1
1
  Wheel-Version: 1.0
2
- Generator: setuptools (75.1.0)
2
+ Generator: setuptools (75.3.0)
3
3
  Root-Is-Purelib: true
4
4
  Tag: py3-none-any
5
5