causing 2.4.0__py3-none-any.whl → 2.4.2__py3-none-any.whl

causing/graph.py

@@ -69,8 +69,8 @@ def save_graph(path: Path, graph_dot):
     svg_code = subprocess.check_output(
         [DOT_COMMAND, "-Tsvg"], input=graph_dot, encoding="utf-8"
     )
-    if dot_version()[0] < 3:
-        svg_code = fix_svg_scale(svg_code)
+    # if dot_version()[0] < 3:
+    #     svg_code = fix_svg_scale(svg_code)
     with open(path, "w") as f:
         f.write(svg_code)
 
@@ -116,7 +116,7 @@ def annotated_graphs(
 
 NODE_PALETTE = "#ff7973 #FFC7AD #EEEEEE #BDE7BD #75cf73".split(" ")
 EDGE_PALETTE = "#ff7973 #FFC7AD #BBBBBB #aad3aa #75cf73".split(" ")
-PEN_WIDTH_PALETTE = [6, 4, 2, 4, 6]
+PEN_WIDTH_PALETTE = [12, 8, 4, 8, 12]
 
 
 def color(val, max_val, palette):
@@ -175,7 +175,10 @@ def graph_to_dot(
         )
         col_str = color(data["effect"], max_val, palette=edge_palette)
         penwidth = color(data["effect"], max_val, palette=pen_width_palette)
-        dot_str += f'    "{from_node}" -> "{to_node}" [label="{eff_str}" color="{col_str}" penwidth="{penwidth}"]\n'
+        dot_str += (
+            f'    "{from_node}" -> "{to_node}" [label="{eff_str}" color="{col_str}" penwidth="{penwidth}", '
+            f"arrowsize=0.5]\n"
+        )
 
     for from_node, to_node in invisible_edges:
         dot_str += f'    "{from_node}" -> "{to_node}" [style = "invisible", arrowhead="none"]\n'

causing/model.py

@@ -1,4 +1,5 @@
 from __future__ import annotations
+
 from dataclasses import dataclass, field
 from typing import Iterable, Callable
 from functools import cached_property
@@ -82,8 +83,18 @@ class Model:
                     eq_inputs[:, fixed_from_ind] = fixed_vals
 
                 try:
+                    # print(f"Comuting variable: {self.yvars[i]}")
+                    # yhat[i] = np.array(
+                    #     [eq(*eq_in, *parameters.values()) for eq_in in eq_inputs],
+                    #     dtype=np.float64,
+                    # )
+                    computed_yvars = []
+                    for eq_in in eq_inputs:
+                        eq_in = [np.float128(value) for value in eq_in]
+                        computed_yvars.append(eq(*eq_in, *parameters.values()))
+
                     yhat[i] = np.array(
-                        [eq(*eq_in, *parameters.values()) for eq_in in eq_inputs],
+                        computed_yvars,
                         dtype=np.float64,
                     )
                 except Exception as e:

causing/utils.py

@@ -11,7 +11,7 @@ def round_sig(x, sig=2) -> float:
     """Round x to the given number of significant figures"""
     if x == 0 or not np.isfinite(x):
         return x
-    return round(x, sig - int(floor(log10(abs(x)))) - 1)
+    return round(x, sig - int(floor(log10(abs(x)))) + 1)
 
 
 def round_sig_recursive(x, sig=2):

{causing-2.4.0.dist-info → causing-2.4.2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: causing
-Version: 2.4.0
+Version: 2.4.2
 Summary: Causing: CAUSal INterpretation using Graphs
 Home-page: https://github.com/realrate/Causing
 Author: Dr. Holger Bartel
@@ -11,11 +11,11 @@ Classifier: Operating System :: OS Independent
 Requires-Python: >=3.9
 Description-Content-Type: text/markdown
 License-File: LICENSE.md
-Requires-Dist: numpy (~=1.23)
-Requires-Dist: pandas (~=1.3)
-Requires-Dist: scipy (~=1.9)
-Requires-Dist: sympy (~=1.5)
-Requires-Dist: networkx (~=2.7)
+Requires-Dist: numpy~=1.23
+Requires-Dist: pandas~=1.3
+Requires-Dist: scipy~=1.9
+Requires-Dist: sympy~=1.5
+Requires-Dist: networkx~=2.7
 Requires-Dist: pre-commit
 
 # Causing: CAUSal INterpretation using Graphs

causing-2.4.2.dist-info/RECORD

@@ -0,0 +1,14 @@
+causing/__init__.py,sha256=O_9uV9aX3q-c6M3KhY7bQAXncAecwnSfXw7ulGmMvSw,714
+causing/graph.py,sha256=OoIwJeYnimU2CCs75UZgYB_gFZo_G3CMGeLGslUHqG8,8694
+causing/model.py,sha256=QzX9wRvmjWNWHUKECQAvvaSTrc0E9xuspamygy3TNQg,8394
+causing/utils.py,sha256=qfiNAb-MxVFeZVan7I4X-q04LVJZ8ST2YdVdvWvnjOE,2461
+tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+tests/test_estimate.py,sha256=xr9qUVzM9XO70agw_J3PE7oy3aiytUs4CMxvsegNZ6w,3120
+tests/utils.py,sha256=OPEuaBQF3_Azu4bW5q-6J5mtzGrVw4KJUWHd8utK4AE,510
+tests/examples/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+tests/examples/models.py,sha256=lr7v4LArOi3MlcKRvjGAJ6pEHVz1IQKbmKctZ02Vcjc,3849
+causing-2.4.2.dist-info/LICENSE.md,sha256=ypzox8OiFHlpmiHOnxpC6PSGuDCNwzn_Q0iPYPJtt2Q,1095
+causing-2.4.2.dist-info/METADATA,sha256=sEeSz1uXIXuSy7tmdFl3jR7SrzkzwB988W8lNp7ubtA,10026
+causing-2.4.2.dist-info/WHEEL,sha256=PZUExdf71Ui_so67QXpySuHtCi3-J3wvF4ORK6k_S8U,91
+causing-2.4.2.dist-info/top_level.txt,sha256=AZ4fGg06-ThD38PJjnIg4Yd1x4v_4hgRtPetAcKMmug,14
+causing-2.4.2.dist-info/RECORD,,

{causing-2.4.0.dist-info → causing-2.4.2.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: bdist_wheel (0.37.1)
+Generator: setuptools (75.6.0)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

causing-2.4.0.dist-info/RECORD

@@ -1,14 +0,0 @@
-causing/__init__.py,sha256=O_9uV9aX3q-c6M3KhY7bQAXncAecwnSfXw7ulGmMvSw,714
-causing/graph.py,sha256=n4PI-fjcNJvXC2qHYFPj-TRDYKN6Vff4s_XwO5GfNu4,8633
-causing/model.py,sha256=1nwo3W1o89KdBsNsG7V4MRknKyqwfBnrfUgx4t5pVPc,7937
-causing/utils.py,sha256=_sbLwqZPbCrmq8aVm_e7I8irW8v9n8b2DFqBWaNFc0o,2461
-tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-tests/test_estimate.py,sha256=xr9qUVzM9XO70agw_J3PE7oy3aiytUs4CMxvsegNZ6w,3120
-tests/utils.py,sha256=OPEuaBQF3_Azu4bW5q-6J5mtzGrVw4KJUWHd8utK4AE,510
-tests/examples/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-tests/examples/models.py,sha256=lr7v4LArOi3MlcKRvjGAJ6pEHVz1IQKbmKctZ02Vcjc,3849
-causing-2.4.0.dist-info/LICENSE.md,sha256=ypzox8OiFHlpmiHOnxpC6PSGuDCNwzn_Q0iPYPJtt2Q,1095
-causing-2.4.0.dist-info/METADATA,sha256=92MtdIQNv98u2BfHJwX6xRbPwMyY7ScyEI8YhY4TNxA,10041
-causing-2.4.0.dist-info/WHEEL,sha256=G16H4A3IeoQmnOrYV4ueZGKSjhipXx8zc8nu9FGlvMA,92
-causing-2.4.0.dist-info/top_level.txt,sha256=AZ4fGg06-ThD38PJjnIg4Yd1x4v_4hgRtPetAcKMmug,14
-causing-2.4.0.dist-info/RECORD,,