cardiac-geometriesx 0.4.3__py3-none-any.whl → 0.4.4__py3-none-any.whl

cardiac_geometries/fibers/utils.py

@@ -27,9 +27,11 @@ def save_microstructure(
     # Save for paraview visualization
 
     if functions[0].function_space.ufl_element().family_name == "quadrature":
-        from scifem.xdmf import create_pointcloud
+        from scifem.xdmf import XDMFFile
+
+        with XDMFFile(Path(outdir) / "microstructure-viz.xdmf", functions) as xdmf:
+            xdmf.write(0.0)
 
-        create_pointcloud(functions=functions, filename=Path(outdir) / "microstructure-viz.xdmf")
     else:
         try:
             with dolfinx.io.VTXWriter(

{cardiac_geometriesx-0.4.3.dist-info → cardiac_geometriesx-0.4.4.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: cardiac-geometriesx
-Version: 0.4.3
+Version: 0.4.4
 Summary: A python library for cardiac geometries
 Author-email: Henrik Finsberg <henriknf@simula.no>
 License: MIT
@@ -12,38 +12,38 @@ Classifier: Programming Language :: Python :: 3 :: Only
 Requires-Python: >=3.8
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: fenics-dolfinx >=0.8.0
+Requires-Dist: fenics-dolfinx>=0.8.0
 Requires-Dist: structlog
 Requires-Dist: cardiac-geometries-core
 Requires-Dist: rich-click
 Requires-Dist: adios4dolfinx
 Requires-Dist: scifem
 Provides-Extra: dev
-Requires-Dist: bump-my-version ; extra == 'dev'
-Requires-Dist: ipython ; extra == 'dev'
-Requires-Dist: pdbpp ; extra == 'dev'
-Requires-Dist: pre-commit ; extra == 'dev'
-Requires-Dist: twine ; extra == 'dev'
-Requires-Dist: wheel ; extra == 'dev'
+Requires-Dist: bump-my-version; extra == "dev"
+Requires-Dist: ipython; extra == "dev"
+Requires-Dist: pdbpp; extra == "dev"
+Requires-Dist: pre-commit; extra == "dev"
+Requires-Dist: twine; extra == "dev"
+Requires-Dist: wheel; extra == "dev"
 Provides-Extra: docs
-Requires-Dist: jupyter-book ; extra == 'docs'
-Requires-Dist: jupytext ; extra == 'docs'
-Requires-Dist: jupyter ; extra == 'docs'
-Requires-Dist: pyvista[all] >=0.43.0 ; extra == 'docs'
-Requires-Dist: trame-vuetify ; extra == 'docs'
-Requires-Dist: ipywidgets ; extra == 'docs'
-Requires-Dist: fenicsx-ldrb ; extra == 'docs'
-Provides-Extra: gui
-Requires-Dist: streamlit ; extra == 'gui'
-Requires-Dist: stpyvista ; extra == 'gui'
-Requires-Dist: pyvista[all] >=0.43.0 ; extra == 'gui'
-Requires-Dist: trame-vuetify ; extra == 'gui'
-Requires-Dist: ipywidgets ; extra == 'gui'
-Requires-Dist: fenicsx-ldrb ; extra == 'gui'
+Requires-Dist: jupyter-book; extra == "docs"
+Requires-Dist: jupytext; extra == "docs"
+Requires-Dist: jupyter; extra == "docs"
+Requires-Dist: pyvista[all]>=0.43.0; extra == "docs"
+Requires-Dist: trame-vuetify; extra == "docs"
+Requires-Dist: ipywidgets; extra == "docs"
+Requires-Dist: fenicsx-ldrb; extra == "docs"
 Provides-Extra: test
-Requires-Dist: pre-commit ; extra == 'test'
-Requires-Dist: pytest ; extra == 'test'
-Requires-Dist: pytest-cov ; extra == 'test'
+Requires-Dist: pre-commit; extra == "test"
+Requires-Dist: pytest; extra == "test"
+Requires-Dist: pytest-cov; extra == "test"
+Provides-Extra: gui
+Requires-Dist: streamlit; extra == "gui"
+Requires-Dist: stpyvista; extra == "gui"
+Requires-Dist: pyvista[all]>=0.43.0; extra == "gui"
+Requires-Dist: trame-vuetify; extra == "gui"
+Requires-Dist: ipywidgets; extra == "gui"
+Requires-Dist: fenicsx-ldrb; extra == "gui"
 
 ![_](docs/_static/logo.png)
 

{cardiac_geometriesx-0.4.3.dist-info → cardiac_geometriesx-0.4.4.dist-info}/RECORD

@@ -7,10 +7,10 @@ cardiac_geometries/utils.py,sha256=hR-uV9lzmfM_kQkqHY9MmJ_b3-Lv5oTsNOKCb-0nn_U,2
 cardiac_geometries/fibers/__init__.py,sha256=WpRrn9Iakl-3m8IGtFkqP0LXGjw5EZHZ8Eg9JCnCdrg,137
 cardiac_geometries/fibers/lv_ellipsoid.py,sha256=LZNhxzTsn-h88xXGP5bNfnWKhdvBROUjWjt8yrQFW48,6010
 cardiac_geometries/fibers/slab.py,sha256=TYQhckJ8mwXz_08Cx3QsPQMtemkaxZ955SnSMrDfBPE,3898
-cardiac_geometries/fibers/utils.py,sha256=bEz2MMSRhzYhiRSFahdqQRsOWzCCauERKU2V6tdgSkQ,3239
-cardiac_geometriesx-0.4.3.dist-info/LICENSE,sha256=lo5K2rJPZOSv6luutGHbzzi3IpXNaB9E2UWq60qvNx0,1111
-cardiac_geometriesx-0.4.3.dist-info/METADATA,sha256=mpSvjuPehah4Z-XxkLrZkcq7U-HUxg66uPFpAFD2BTM,4185
-cardiac_geometriesx-0.4.3.dist-info/WHEEL,sha256=P9jw-gEje8ByB7_hXoICnHtVCrEwMQh-630tKvQWehc,91
-cardiac_geometriesx-0.4.3.dist-info/entry_points.txt,sha256=xOBnlc6W-H9oCDYLNz3kpki26OmpfYSoFSrmi_4V-Ec,52
-cardiac_geometriesx-0.4.3.dist-info/top_level.txt,sha256=J0gQxkWR2my5Vf7Qt8buDY8ZOjYdVfIweVunCGXWKNE,19
-cardiac_geometriesx-0.4.3.dist-info/RECORD,,
+cardiac_geometries/fibers/utils.py,sha256=QQSpkXQR9Fk457tjGckP-fuo43YAUlrfK7s_xBDxA1Q,3245
+cardiac_geometriesx-0.4.4.dist-info/LICENSE,sha256=lo5K2rJPZOSv6luutGHbzzi3IpXNaB9E2UWq60qvNx0,1111
+cardiac_geometriesx-0.4.4.dist-info/METADATA,sha256=9Adw7oZW-ChT2_HcofTzu-XT_qtI32q4w2hAZSUv2ao,4160
+cardiac_geometriesx-0.4.4.dist-info/WHEEL,sha256=PZUExdf71Ui_so67QXpySuHtCi3-J3wvF4ORK6k_S8U,91
+cardiac_geometriesx-0.4.4.dist-info/entry_points.txt,sha256=xOBnlc6W-H9oCDYLNz3kpki26OmpfYSoFSrmi_4V-Ec,52
+cardiac_geometriesx-0.4.4.dist-info/top_level.txt,sha256=J0gQxkWR2my5Vf7Qt8buDY8ZOjYdVfIweVunCGXWKNE,19
+cardiac_geometriesx-0.4.4.dist-info/RECORD,,

{cardiac_geometriesx-0.4.3.dist-info → cardiac_geometriesx-0.4.4.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (75.3.0)
+Generator: setuptools (75.6.0)
 Root-Is-Purelib: true
 Tag: py3-none-any