canvas 0.2.5__py3-none-any.whl → 0.2.10__py3-none-any.whl

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Files changed (85) hide show
  1. {canvas-0.2.5.dist-info → canvas-0.2.10.dist-info}/METADATA +4 -1
  2. canvas-0.2.10.dist-info/RECORD +143 -0
  3. canvas_cli/apps/plugin/plugin.py +51 -9
  4. canvas_cli/apps/plugin/tests.py +51 -0
  5. canvas_cli/tests.py +193 -4
  6. canvas_cli/utils/validators/manifest_schema.py +1 -0
  7. canvas_generated/messages/effects_pb2.py +2 -2
  8. canvas_generated/messages/effects_pb2.pyi +136 -0
  9. canvas_generated/messages/events_pb2.py +3 -3
  10. canvas_generated/messages/events_pb2.pyi +614 -0
  11. canvas_sdk/__init__.py +7 -0
  12. canvas_sdk/base.py +6 -2
  13. canvas_sdk/commands/__init__.py +26 -0
  14. canvas_sdk/commands/base.py +35 -32
  15. canvas_sdk/commands/commands/allergy.py +49 -0
  16. canvas_sdk/commands/commands/assess.py +1 -1
  17. canvas_sdk/commands/commands/close_goal.py +22 -0
  18. canvas_sdk/commands/commands/diagnose.py +3 -3
  19. canvas_sdk/commands/commands/family_history.py +18 -0
  20. canvas_sdk/commands/commands/goal.py +3 -3
  21. canvas_sdk/commands/commands/history_present_illness.py +1 -1
  22. canvas_sdk/commands/commands/instruct.py +17 -0
  23. canvas_sdk/commands/commands/lab_order.py +33 -0
  24. canvas_sdk/commands/commands/medical_history.py +34 -0
  25. canvas_sdk/commands/commands/medication_statement.py +1 -1
  26. canvas_sdk/commands/commands/past_surgical_history.py +28 -0
  27. canvas_sdk/commands/commands/perform.py +17 -0
  28. canvas_sdk/commands/commands/plan.py +2 -2
  29. canvas_sdk/commands/commands/prescribe.py +10 -7
  30. canvas_sdk/commands/commands/questionnaire.py +1 -1
  31. canvas_sdk/commands/commands/refill.py +16 -0
  32. canvas_sdk/commands/commands/remove_allergy.py +26 -0
  33. canvas_sdk/commands/commands/stop_medication.py +1 -1
  34. canvas_sdk/commands/commands/task.py +52 -0
  35. canvas_sdk/commands/commands/update_diagnosis.py +27 -0
  36. canvas_sdk/commands/commands/update_goal.py +1 -1
  37. canvas_sdk/commands/commands/vitals.py +78 -0
  38. canvas_sdk/commands/constants.py +7 -0
  39. canvas_sdk/commands/tests/protocol/__init__.py +0 -0
  40. canvas_sdk/commands/tests/protocol/tests.py +55 -0
  41. canvas_sdk/commands/tests/schema/__init__.py +0 -0
  42. canvas_sdk/commands/tests/schema/tests.py +104 -0
  43. canvas_sdk/commands/tests/test_utils.py +170 -6
  44. canvas_sdk/commands/tests/unit/__init__.py +0 -0
  45. canvas_sdk/commands/tests/{tests.py → unit/tests.py} +20 -194
  46. canvas_sdk/effects/banner_alert/add_banner_alert.py +8 -7
  47. canvas_sdk/effects/banner_alert/remove_banner_alert.py +3 -2
  48. canvas_sdk/effects/banner_alert/tests.py +224 -0
  49. canvas_sdk/effects/base.py +3 -5
  50. canvas_sdk/effects/patient_chart_summary_configuration.py +39 -0
  51. canvas_sdk/effects/protocol_card/__init__.py +1 -0
  52. canvas_sdk/effects/protocol_card/protocol_card.py +83 -0
  53. canvas_sdk/effects/protocol_card/tests.py +184 -0
  54. canvas_sdk/protocols/clinical_quality_measure.py +41 -0
  55. canvas_sdk/utils/db.py +17 -0
  56. canvas_sdk/v1/__init__.py +0 -0
  57. canvas_sdk/v1/data/__init__.py +3 -0
  58. canvas_sdk/v1/data/allergy_intolerance.py +63 -0
  59. canvas_sdk/v1/data/base.py +47 -0
  60. canvas_sdk/v1/data/condition.py +48 -0
  61. canvas_sdk/v1/data/lab.py +96 -0
  62. canvas_sdk/v1/data/medication.py +54 -0
  63. canvas_sdk/v1/data/patient.py +49 -0
  64. canvas_sdk/v1/data/user.py +10 -0
  65. canvas_sdk/value_set/tests/test_value_sets.py +65 -0
  66. canvas_sdk/value_set/v2022/adverse_event.py +33 -0
  67. canvas_sdk/value_set/v2022/allergy.py +232 -0
  68. canvas_sdk/value_set/v2022/assessment.py +215 -0
  69. canvas_sdk/value_set/v2022/communication.py +325 -0
  70. canvas_sdk/value_set/v2022/condition.py +40654 -0
  71. canvas_sdk/value_set/v2022/device.py +174 -0
  72. canvas_sdk/value_set/v2022/diagnostic_study.py +4967 -0
  73. canvas_sdk/value_set/v2022/encounter.py +2564 -0
  74. canvas_sdk/value_set/v2022/immunization.py +341 -0
  75. canvas_sdk/value_set/v2022/individual_characteristic.py +307 -0
  76. canvas_sdk/value_set/v2022/intervention.py +1356 -0
  77. canvas_sdk/value_set/v2022/laboratory_test.py +1250 -0
  78. canvas_sdk/value_set/v2022/medication.py +5130 -0
  79. canvas_sdk/value_set/v2022/physical_exam.py +201 -0
  80. canvas_sdk/value_set/v2022/procedure.py +4037 -0
  81. canvas_sdk/value_set/v2022/symptom.py +176 -0
  82. canvas_sdk/value_set/value_set.py +91 -0
  83. canvas-0.2.5.dist-info/RECORD +0 -91
  84. {canvas-0.2.5.dist-info → canvas-0.2.10.dist-info}/WHEEL +0 -0
  85. {canvas-0.2.5.dist-info → canvas-0.2.10.dist-info}/entry_points.txt +0 -0
canvas_sdk/value_set/v2022/communication.py ADDED
@@ -0,0 +1,325 @@
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+ from ..value_set import ValueSet
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+
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+
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+ class LevelOfSeverityOfRetinopathyFindings(ValueSet):
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+ """
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+ **Clinical Focus:** The purpose of this value set is to represent concepts for diagnoses of the level of severity of retinopathy.
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+
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+ **Data Element Scope:** This value set may use a model element related to Diagnosis or Communication.
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+
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+ **Inclusion Criteria:** Includes concepts that represent a diagnosis of mild, moderate, severe, or very severe non-proliferative and proliferative diabetic retinopathy.
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+
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+ **Exclusion Criteria:** No exclusions.
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+
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+ ** Used in:** CMS142v10
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+ """
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+
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+ VALUE_SET_NAME = "Level of Severity of Retinopathy Findings"
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+ OID = "2.16.840.1.113883.3.526.3.1283"
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+ DEFINITION_VERSION = "20210209"
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+ EXPANSION_VERSION = "eCQM Update 2021-05-06"
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+
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+ SNOMEDCT = {
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+ "59276001", # Proliferative retinopathy due to diabetes mellitus (disorder)
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+ "312903003", # Mild nonproliferative retinopathy due to diabetes mellitus (disorder)
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+ "312904009", # Moderate nonproliferative retinopathy due to diabetes mellitus (disorder)
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+ "312905005", # Severe nonproliferative retinopathy due to diabetes mellitus (disorder)
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+ "399876000", # Very severe nonproliferative retinopathy due to diabetes mellitus (disorder)
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+ }
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+
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+
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+ class MacularEdemaFindingsPresent(ValueSet):
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+ """
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+ **Clinical Focus:** The purpose of this value set is to represent concepts for diagnoses to identify the presence of macular edema.
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+
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+ **Data Element Scope:** This value set may use a model element related to Diagnosis.
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+
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+ **Inclusion Criteria:** Includes concepts that represent a diagnosis of macular edema.
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+
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+ **Exclusion Criteria:** Excludes concepts that represent a diagnosis of non-macular edema.
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+
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+ ** Used in:** CMS142v10
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+ """
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+
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+ VALUE_SET_NAME = "Macular Edema Findings Present"
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+ OID = "2.16.840.1.113883.3.526.3.1320"
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+ DEFINITION_VERSION = "20210209"
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+ EXPANSION_VERSION = "eCQM Update 2021-05-06"
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+
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+ SNOMEDCT = {
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+ "37231002", # Macular retinal edema (disorder)
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+ "193350004", # Advanced maculopathy due to diabetes mellitus (disorder)
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+ "193387007", # Cystoid macular edema (disorder)
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+ "232020009", # Disorder of macula due to diabetes mellitus (disorder)
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+ "312911008", # Clinically significant macular edema (disorder)
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+ "312912001", # Macular edema due to diabetes mellitus (disorder)
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+ "312920004", # Postoperative cystoid macular edema (disorder)
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+ "312921000", # Autosomal dominant cystoid macular edema (disorder)
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+ "312922007", # Uveitis related cystoid macular edema (disorder)
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+ "314010006", # Diffuse exudative maculopathy due to diabetes mellitus (disorder)
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+ "314011005", # Focal exudative maculopathy due to diabetes mellitus (disorder)
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+ "314014002", # Ischemic maculopathy due to diabetes mellitus (disorder)
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+ "314015001", # Mixed maculopathy due to diabetes mellitus (disorder)
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+ "399864000", # Macular edema not clinically significant due to diabetes mellitus (disorder)
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+ "399874002", # High risk proliferative retinopathy with clinically significant macula edema due to diabetes mellitus (disorder)
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+ "399875001", # Non-high-risk proliferative retinopathy with clinically significant macular edema due to diabetes mellitus (disorder)
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+ "420486006", # Exudative maculopathy due to type 1 diabetes mellitus (disorder)
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+ "421779007", # Exudative maculopathy due to type 2 diabetes mellitus (disorder)
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+ "432789001", # Noncystoid edema of macula of retina (disorder)
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+ "769217008", # Macular edema of right eye due to diabetes mellitus (disorder)
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+ "769218003", # Macular edema of left eye due to diabetes mellitus (disorder)
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+ "769219006", # Macular edema due to type 1 diabetes mellitus (disorder)
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+ "769220000", # Macular edema due to type 2 diabetes mellitus (disorder)
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+ "770097006", # Clinically significant macular edema due to diabetes mellitus (disorder)
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+ "870529009", # Persistent macular edema due to diabetes mellitus (disorder)
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+ "871778008", # Centrally involved macular edema due to diabetes mellitus (disorder)
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+ "871781003", # Non centrally involved macular edema due to diabetes mellitus (disorder)
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+ }
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+
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+
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+ class ConsultantReport(ValueSet):
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+ """
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+ **Clinical Focus:** The purpose of this value set is to represent concepts for consultant reports.
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+
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+ **Data Element Scope:** This value set may use a model element related to Assessment.
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+
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+ **Inclusion Criteria:** Includes concepts that represent various consultant reports and notes.
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+
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+ **Exclusion Criteria:** No exclusions.
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+
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+ ** Used in:** CMS50v10
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+ """
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+
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+ VALUE_SET_NAME = "Consultant Report"
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+ OID = "2.16.840.1.113883.3.464.1003.121.12.1006"
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+ DEFINITION_VERSION = "20190315"
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+ EXPANSION_VERSION = "eCQM Update 2021-05-06"
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+
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+ LOINC = {
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+ "11488-4", # Consult note
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+ "34099-2", # Cardiology Consult note
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+ "34100-8", # Intensive care unit Consult note
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+ "34101-6", # General medicine Outpatient Consult note
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+ "34102-4", # Psychiatry Hospital Consult note
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+ "34103-2", # Pulmonary Consult note
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+ "34104-0", # Hospital Consult note
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+ "34749-2", # Anesthesiology Outpatient Consult note
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+ "34756-7", # Dentistry Consult note
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+ "34758-3", # Dermatology Consult note
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+ "34760-9", # Diabetology Consult note
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+ "34761-7", # Gastroenterology Consult note
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+ "34764-1", # General medicine Consult note
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+ "34776-5", # Geriatric medicine Consult note
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+ "34777-3", # Obstetrics and Gynecology Consult note
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+ "34779-9", # Hematology+Medical oncology Consult note
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+ "34781-5", # Infectious disease Consult note
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+ "34783-1", # Kinesiotherapy Consult note
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+ "34785-6", # Mental health Consult note
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+ "34788-0", # Psychiatry Consult note
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+ "34791-4", # Psychology Consult note
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+ "34795-5", # Nephrology Consult note
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+ "34797-1", # Neurology Consult note
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+ "34798-9", # Neurological surgery Consult note
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+ "34800-3", # Nutrition and dietetics Consult note
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+ "34803-7", # Occupational medicine Consult note
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+ "34805-2", # Oncology Consult note
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+ "34807-8", # Ophthalmology Consult note
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+ "34810-2", # Optometry Consult note
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+ "34812-8", # Oral and Maxillofacial Surgery Consult note
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+ "34814-4", # Orthopaedic surgery Consult note
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+ "34816-9", # Otolaryngology Consult note
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+ "34820-1", # Pharmacology Consult note
132
+ "34822-7", # Physical medicine and rehab Consult note
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+ "34824-3", # Physical therapy Consult note
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+ "34826-8", # Plastic surgery Consult note
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+ "34828-4", # Podiatry Consult note
136
+ "34831-8", # Radiation oncology Consult note
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+ "34833-4", # Recreational therapy Consult note
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+ "34837-5", # Respiratory therapy Consult note
139
+ "34839-1", # Rheumatology Consult note
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+ "34841-7", # Social worker Consult note
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+ "34845-8", # Speech-language pathology+Audiology Consult note
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+ "34847-4", # Surgery Consult note
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+ "34849-0", # Cardiothoracic surgery Consult note
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+ "34851-6", # Urology Consult note
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+ "34853-2", # Vascular surgery Consult note
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+ "34855-7", # Occupational therapy Consult note
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+ "34879-7", # Endocrinology Consult note
148
+ "51845-6", # Outpatient Consult note
149
+ "51846-4", # Emergency department Consult note
150
+ "51854-8", # Long term care facility Consult note
151
+ "64056-5", # General medicine Medical student Hospital Consult note
152
+ "64068-0", # Surgery Medical student Hospital Consult note
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+ "64072-2", # Critical care medicine Medical student Hospital Consult note
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+ "64076-3", # Cardiothoracic surgery Medical student Hospital Consult note
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+ "64080-5", # Pulmonary Medical student Hospital Consult note
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+ "68469-6", # Pastoral care Hospital Consult note
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+ "68486-0", # Cardiology Medical student Hospital Consult note
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+ "68551-1", # Dermatology Hospital Consult note
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+ "68566-9", # Obstetrics and Gynecology Hospital Consult note
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+ "68570-1", # Occupational therapy Hospital Consult note
161
+ "68575-0", # Ophthalmology Hospital Consult note
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+ "68586-7", # Pharmacology Hospital Consult note
163
+ "68590-9", # Physical therapy Hospital Consult note
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+ "68597-4", # Plastic surgery Hospital Consult note
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+ "68619-6", # Adolescent medicine Hospital Consult note
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+ "68633-7", # Allergy and Immunology Hospital Consult note
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+ "68639-4", # Audiology Hospital Consult note
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+ "68648-5", # Child and adolescent psychiatry Hospital Consult note
169
+ "68651-9", # Clinical biochemical genetics Hospital Consult note
170
+ "68661-8", # Clinical genetics Hospital Consult note
171
+ "68670-9", # Developmental-behavioral pediatrics Hospital Consult note
172
+ "68681-6", # Multi-specialty program Hospital Consult note
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+ "68685-7", # Neonatal perinatal medicine Hospital Consult note
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+ "68694-9", # Neurological surgery Hospital Consult note
175
+ "68705-3", # Neurology with special qualifications in child neurology Hospital Consult note
176
+ "68716-0", # Pain medicine Hospital Consult note
177
+ "68727-7", # Pediatric cardiology Hospital Consult note
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+ "68746-7", # Pediatric gastroenterology Hospital Consult note
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+ "68757-4", # Pediatric hematology-oncology Hospital Consult note
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+ "68765-7", # Pediatric infectious diseases Hospital Consult note
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+ "68787-1", # Pediatric pulmonology Hospital Consult note
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+ "68802-8", # Pediatric surgery Hospital Consult note
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+ "68812-7", # Pediatric urology Hospital Consult note
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+ "68821-8", # Pediatrics Hospital Consult note
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+ "68837-4", # Primary care Hospital Consult note
186
+ "68846-5", # Speech-language pathology Hospital Consult note
187
+ "68852-3", # Transplant surgery Hospital Consult note
188
+ "68864-8", # Pediatric transplant hepatology Hospital Consult note
189
+ "68869-7", # Pediatric nephrology Hospital Consult note
190
+ "68874-7", # Pediatric otolaryngology Hospital Consult note
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+ "68879-6", # Pediatric rheumatology Hospital Consult note
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+ "68892-9", # Pediatric dermatology Hospital Consult note
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+ "68897-8", # Pediatric endocrinology Hospital Consult note
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+ "72555-6", # Interventional radiology Consult note
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+ "73575-3", # Radiology Consult note
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+ "75424-2", # Audiology Consult note
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+ "75465-5", # Orthotics prosthetics Consult note
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+ "77403-4", # Anesthesiology Consult note
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+ "77429-9", # Allergy and Immunology Consult note
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+ "78250-8", # Colon and rectal surgery Consult note
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+ "78251-6", # Hematology Consult note
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+ "78252-4", # Multi-specialty program Consult note
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+ "78253-2", # Family medicine Consult note
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+ "78254-0", # Clinical genetics Consult note
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+ "78405-8", # Neonatal perinatal medicine Consult note
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+ "78406-6", # Nurse practitioner Consult note
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+ "78496-7", # Critical care medicine Consult note
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+ "78498-3", # Cardiopulmonary Consult note
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+ "78567-5", # Pain medicine Consult note
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+ "78568-3", # Palliative care Consult note
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+ "78726-7", # Pediatrics Consult note
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+ "78732-5", # Trauma Consult note
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+ "78738-2", # Sports medicine Consult note
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+ "79428-9", # Rapid response team Consult note
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+ "80396-5", # Gynecologic oncology Consult note
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+ "80575-4", # Cardiac surgery Consult note
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+ "80664-6", # Clinical neurophysiology Consult note
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+ "80666-1", # Vascular neurology Consult note
219
+ "80673-7", # Maternal and fetal medicine Consult note
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+ "80736-2", # Blood banking and transfusion medicine Consult note
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+ "80801-4", # Surgical oncology Consult note
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+ "81191-9", # Chemical pathology Consult note
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+ "81192-7", # Clinical pathology Consult note
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+ "81193-5", # Medical microbiology - pathology Consult note
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+ "81196-8", # Clinical pharmacology Consult note
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+ "82356-7", # Obstetrics Midwife Consult note
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+ "82359-1", # Reproductive endocrinology and infertility Consult note
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+ "83570-2", # Diabetology Nurse Consult note
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+ "83578-5", # Hematology+Medical oncology Nurse Consult note
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+ "83609-8", # Psychiatry Nurse Consult note
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+ "83621-3", # Geriatric medicine Nurse Consult note
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+ "83653-6", # Pain medicine Team Consult note
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+ "83685-8", # Hematology+Medical oncology Attending Consult note
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+ "83720-3", # Physical medicine and rehab Long term care facility Consult note
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+ "83722-9", # Physical medicine and rehabilitation Nurse Consult note
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+ "83868-0", # Preventive medicine Consult note
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+ "83873-0", # Primary care Consult note
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+ "83888-8", # Psychiatry Long term care facility Consult note
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+ "83909-2", # Public health Consult note
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+ "83912-6", # Pulmonary Patient's home Consult note
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+ "83926-6", # Recreational therapy Long term care facility Consult note
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+ "83931-6", # Research Consult note
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+ "83941-5", # Respiratory therapy Patient's home Consult note
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+ "83960-5", # Social worker Patient's home Consult note
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+ "83967-0", # Social worker Long term care facility Consult note
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+ "83984-5", # Speech-language pathology Consult note
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+ "83992-8", # Spinal cord injury medicine Consult note
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+ "83996-9", # Spinal cord injury medicine Patient's home Consult note
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+ "84035-5", # Transplant surgery Consult note
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+ "84071-0", # Chiropractic medicine Consult note
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+ "84115-5", # Geriatric medicine Long term care facility Consult note
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+ "84126-2", # Surgery of the hand Consult note
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+ "84131-2", # Primary care Patient's home Consult note
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+ "84142-9", # Hematology+Medical oncology Hospital Consult note
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+ "84145-2", # Hematology+Medical oncology Outpatient Consult note
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+ "84152-8", # Hepatology Consult note
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+ "84173-4", # Interventional cardiology Consult note
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+ "84190-8", # Medical toxicology Consult note
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+ "84213-8", # Mental health Team Consult note
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+ "84231-0", # Neurology Telehealth Consult note
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+ "84241-9", # Nurse Consult note
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+ "84280-7", # Nutrition and dietetics Patient's home Consult note
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+ "84292-2", # Nutrition and dietetics Team Consult note
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+ "84303-7", # Wound care management Consult note
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+ "84312-8", # Vocational rehabilitation Consult note
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+ "84324-3", # Physical therapy Long term care facility Consult note
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+ "84349-0", # Pastoral care Consult note
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+ "84352-4", # Palliative care Team Consult note
269
+ "84358-1", # Palliative care Patient's home Consult note
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+ "84394-6", # Occupational therapy Patient's home Consult note
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+ "84398-7", # Occupational therapy Long term care facility Consult note
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+ "85174-1", # Custodial care facility Consult note
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+ "85208-7", # Telehealth Consult note
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+ "85222-8", # Case manager Consult note
275
+ "85232-7", # Tumor board Consult note
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+ "85237-6", # Acupuncture Consult note
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+ "85238-4", # Internal medicine Consult note
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+ "85517-1", # Bariatric surgery Consult note
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+ "85519-7", # Child and adolescent psychology Consult note
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+ "85866-2", # Sleep medicine Consult note
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+ "85871-2", # Womens health Consult note
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+ "85882-9", # Ophthalmology Teleimaging Consult note
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+ "85884-5", # Epilepsy Consult note
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+ "85886-0", # Clinical cardiac electrophysiology Consult note
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+ "85890-2", # Neuropsychology Consult note
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+ "85899-3", # Community health care Consult note
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+ "86451-2", # Ethics Consult note
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+ "87233-3", # Dialysis Consult note
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+ "87254-9", # Addiction medicine Consult note
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+ "87627-6", # Brain injury Consult note
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+ "88351-2", # Polytrauma Consult note
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+ "88640-8", # Community health care Adult day care center Consult note
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+ "88644-0", # Outpatient hospital Consult note
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+ "89031-9", # Hematology Telehealth Consult note
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+ "89032-7", # Nephrology Telehealth Consult note
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+ "89033-5", # Urology Telehealth Consult note
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+ "89216-6", # Gynecology Consult note
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+ "89227-3", # Obstetrics Consult note
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+ "89446-9", # Obstetrics Hospital Consult note
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+ "89447-7", # Gynecology Hospital Consult note
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+ "89551-6", # Environmental health Consult note
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+ "90006-8", # Pharmacogenomics Consult note
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+ "90012-6", # Burn management Consult note
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+ "90343-5", # Nuclear medicine Consult note
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+ "90354-2", # Obesity medicine Consult note
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+ "90709-7", # Adolescent medicine Consult note
307
+ "90710-5", # Developmental-behavioral pediatrics Consult note
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+ "90712-1", # Sleep medicine Telehealth Consult note
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+ "90714-7", # Pain medicine Telehealth Consult note
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+ "90715-4", # Palliative care Telehealth Consult note
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+ "90717-0", # Heart failure+Transplant cardiology Consult note
312
+ "90771-7", # Heart failure Consult note
313
+ "91986-0", # Integrative medicine Consult note
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+ "92910-9", # Spinal surgery Consult note
315
+ "92912-5", # Eating disorders Consult note
316
+ "92915-8", # Immunology Consult note
317
+ "93024-8", # Pharmacist Consult note
318
+ "93413-3", # Mechanical circulatory support Consultation note
319
+ "93955-3", # Wound, Ostomy, and Continence Care Consult note
320
+ }
321
+ SNOMEDCT = {
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+ "371530004", # Clinical consultation report (record artifact)
323
+ "371531000", # Report of clinical encounter (record artifact)
324
+ "371545006", # Confirmatory consultation report (record artifact)
325
+ }