brkraw 0.3.11__py3-none-any.whl → 0.5.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- brkraw/__init__.py +9 -3
- brkraw/apps/__init__.py +12 -0
- brkraw/apps/addon/__init__.py +30 -0
- brkraw/apps/addon/core.py +35 -0
- brkraw/apps/addon/dependencies.py +402 -0
- brkraw/apps/addon/installation.py +500 -0
- brkraw/apps/addon/io.py +21 -0
- brkraw/apps/hook/__init__.py +25 -0
- brkraw/apps/hook/core.py +636 -0
- brkraw/apps/loader/__init__.py +10 -0
- brkraw/apps/loader/core.py +622 -0
- brkraw/apps/loader/formatter.py +288 -0
- brkraw/apps/loader/helper.py +797 -0
- brkraw/apps/loader/info/__init__.py +11 -0
- brkraw/apps/loader/info/scan.py +85 -0
- brkraw/apps/loader/info/scan.yaml +90 -0
- brkraw/apps/loader/info/study.py +69 -0
- brkraw/apps/loader/info/study.yaml +156 -0
- brkraw/apps/loader/info/transform.py +92 -0
- brkraw/apps/loader/types.py +220 -0
- brkraw/cli/__init__.py +5 -0
- brkraw/cli/commands/__init__.py +2 -0
- brkraw/cli/commands/addon.py +327 -0
- brkraw/cli/commands/config.py +205 -0
- brkraw/cli/commands/convert.py +903 -0
- brkraw/cli/commands/hook.py +348 -0
- brkraw/cli/commands/info.py +74 -0
- brkraw/cli/commands/init.py +214 -0
- brkraw/cli/commands/params.py +106 -0
- brkraw/cli/commands/prune.py +288 -0
- brkraw/cli/commands/session.py +371 -0
- brkraw/cli/hook_args.py +80 -0
- brkraw/cli/main.py +83 -0
- brkraw/cli/utils.py +60 -0
- brkraw/core/__init__.py +13 -0
- brkraw/core/config.py +380 -0
- brkraw/core/entrypoints.py +25 -0
- brkraw/core/formatter.py +367 -0
- brkraw/core/fs.py +495 -0
- brkraw/core/jcamp.py +600 -0
- brkraw/core/layout.py +451 -0
- brkraw/core/parameters.py +781 -0
- brkraw/core/zip.py +1121 -0
- brkraw/dataclasses/__init__.py +14 -0
- brkraw/dataclasses/node.py +139 -0
- brkraw/dataclasses/reco.py +33 -0
- brkraw/dataclasses/scan.py +61 -0
- brkraw/dataclasses/study.py +131 -0
- brkraw/default/__init__.py +3 -0
- brkraw/default/pruner_specs/deid4share.yaml +42 -0
- brkraw/default/rules/00_default.yaml +4 -0
- brkraw/default/specs/metadata_dicom.yaml +236 -0
- brkraw/default/specs/metadata_transforms.py +92 -0
- brkraw/resolver/__init__.py +7 -0
- brkraw/resolver/affine.py +539 -0
- brkraw/resolver/datatype.py +69 -0
- brkraw/resolver/fid.py +90 -0
- brkraw/resolver/helpers.py +36 -0
- brkraw/resolver/image.py +188 -0
- brkraw/resolver/nifti.py +370 -0
- brkraw/resolver/shape.py +235 -0
- brkraw/schema/__init__.py +3 -0
- brkraw/schema/context_map.yaml +62 -0
- brkraw/schema/meta.yaml +57 -0
- brkraw/schema/niftiheader.yaml +95 -0
- brkraw/schema/pruner.yaml +55 -0
- brkraw/schema/remapper.yaml +128 -0
- brkraw/schema/rules.yaml +154 -0
- brkraw/specs/__init__.py +10 -0
- brkraw/specs/hook/__init__.py +12 -0
- brkraw/specs/hook/logic.py +31 -0
- brkraw/specs/hook/validator.py +22 -0
- brkraw/specs/meta/__init__.py +5 -0
- brkraw/specs/meta/validator.py +156 -0
- brkraw/specs/pruner/__init__.py +15 -0
- brkraw/specs/pruner/logic.py +361 -0
- brkraw/specs/pruner/validator.py +119 -0
- brkraw/specs/remapper/__init__.py +27 -0
- brkraw/specs/remapper/logic.py +924 -0
- brkraw/specs/remapper/validator.py +314 -0
- brkraw/specs/rules/__init__.py +6 -0
- brkraw/specs/rules/logic.py +263 -0
- brkraw/specs/rules/validator.py +103 -0
- brkraw-0.5.0.dist-info/METADATA +81 -0
- brkraw-0.5.0.dist-info/RECORD +88 -0
- {brkraw-0.3.11.dist-info → brkraw-0.5.0.dist-info}/WHEEL +1 -2
- brkraw-0.5.0.dist-info/entry_points.txt +13 -0
- brkraw/lib/__init__.py +0 -4
- brkraw/lib/backup.py +0 -641
- brkraw/lib/bids.py +0 -0
- brkraw/lib/errors.py +0 -125
- brkraw/lib/loader.py +0 -1220
- brkraw/lib/orient.py +0 -194
- brkraw/lib/parser.py +0 -48
- brkraw/lib/pvobj.py +0 -301
- brkraw/lib/reference.py +0 -245
- brkraw/lib/utils.py +0 -471
- brkraw/scripts/__init__.py +0 -0
- brkraw/scripts/brk_backup.py +0 -106
- brkraw/scripts/brkraw.py +0 -744
- brkraw/ui/__init__.py +0 -0
- brkraw/ui/config.py +0 -17
- brkraw/ui/main_win.py +0 -214
- brkraw/ui/previewer.py +0 -225
- brkraw/ui/scan_info.py +0 -72
- brkraw/ui/scan_list.py +0 -73
- brkraw/ui/subj_info.py +0 -128
- brkraw-0.3.11.dist-info/METADATA +0 -25
- brkraw-0.3.11.dist-info/RECORD +0 -28
- brkraw-0.3.11.dist-info/entry_points.txt +0 -3
- brkraw-0.3.11.dist-info/top_level.txt +0 -2
- tests/__init__.py +0 -0
- {brkraw-0.3.11.dist-info → brkraw-0.5.0.dist-info/licenses}/LICENSE +0 -0
brkraw/lib/errors.py
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class Error(Exception):
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""" Base class for other custom exceptions """
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message = None
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class FileNotValidError(Error):
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""" Raised when the file is not valid format """
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class ArchiveFailedError(Error):
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""" Raised when the archive process is failed [designed for brkraw module] """
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class RemoveFailedError(Error):
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class RenameFailedError(Error):
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""" Raised when the os.rename process is failed (OSError)"""
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class UnexpectedError(Error):
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class ValueConflictInField(Error):
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class InvalidApproach(Error):
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