braintools 0.0.13__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- braintools/__init__.py +39 -0
- braintools/_misc.py +42 -0
- braintools/_spike_encoder.py +777 -0
- braintools/_spike_encoder_test.py +483 -0
- braintools/_spike_operation.py +213 -0
- braintools/_spike_operation_test.py +94 -0
- braintools/_transform.py +1150 -0
- braintools/_transform_test.py +197 -0
- braintools/conn/__init__.py +120 -0
- braintools/conn/_base.py +1034 -0
- braintools/conn/_base_test.py +1029 -0
- braintools/conn/_biological.py +296 -0
- braintools/conn/_biological_test.py +480 -0
- braintools/conn/_compartment.py +1705 -0
- braintools/conn/_compartment_test.py +1326 -0
- braintools/conn/_kernel.py +1219 -0
- braintools/conn/_kernel_test.py +1683 -0
- braintools/conn/_random.py +602 -0
- braintools/conn/_random_test.py +872 -0
- braintools/conn/_regular.py +231 -0
- braintools/conn/_regular_test.py +263 -0
- braintools/conn/_spatial.py +1505 -0
- braintools/conn/_spatial_test.py +322 -0
- braintools/conn/_topological.py +1628 -0
- braintools/conn/_topological_test.py +1616 -0
- braintools/file/__init__.py +25 -0
- braintools/file/_matfile.py +77 -0
- braintools/file/_matfile_test.py +148 -0
- braintools/file/_msg_checkpoint.py +845 -0
- braintools/file/_msg_checkpoint_test.py +320 -0
- braintools/init/__init__.py +37 -0
- braintools/init/_distance_base.py +349 -0
- braintools/init/_distance_base_test.py +190 -0
- braintools/init/_distance_impl.py +664 -0
- braintools/init/_distance_impl_test.py +755 -0
- braintools/init/_init_base.py +437 -0
- braintools/init/_init_base_test.py +676 -0
- braintools/init/_init_basic.py +455 -0
- braintools/init/_init_basic_test.py +468 -0
- braintools/init/_init_composite.py +275 -0
- braintools/init/_init_composite_test.py +341 -0
- braintools/init/_init_orthogonal.py +226 -0
- braintools/init/_init_orthogonal_test.py +236 -0
- braintools/init/_init_variance_scaling.py +389 -0
- braintools/init/_init_variance_scaling_test.py +255 -0
- braintools/init/_init_with_distance.py +83 -0
- braintools/init/_init_with_distance_test.py +454 -0
- braintools/input/__init__.py +73 -0
- braintools/input/_composable_base.py +1186 -0
- braintools/input/_composable_base_test.py +588 -0
- braintools/input/_composable_basic.py +634 -0
- braintools/input/_composable_basic_test.py +560 -0
- braintools/input/_composable_pulses.py +870 -0
- braintools/input/_composable_pulses_test.py +548 -0
- braintools/input/_composable_stochastic.py +621 -0
- braintools/input/_composable_stochastic_test.py +561 -0
- braintools/input/_composable_waveforms.py +1156 -0
- braintools/input/_composable_waveforms_test.py +736 -0
- braintools/input/_deprecation.py +142 -0
- braintools/input/_functional_basic.py +607 -0
- braintools/input/_functional_basic_test.py +319 -0
- braintools/input/_functional_pulses.py +720 -0
- braintools/input/_functional_pulses_test.py +393 -0
- braintools/input/_functional_stochastic.py +518 -0
- braintools/input/_functional_stochastic_test.py +337 -0
- braintools/input/_functional_waveforms.py +1172 -0
- braintools/input/_functional_waveforms_test.py +372 -0
- braintools/metric/__init__.py +46 -0
- braintools/metric/_classification.py +1079 -0
- braintools/metric/_classification_test.py +625 -0
- braintools/metric/_correlation.py +556 -0
- braintools/metric/_correlation_test.py +503 -0
- braintools/metric/_fenchel_young.py +122 -0
- braintools/metric/_fenchel_young_test.py +53 -0
- braintools/metric/_firings.py +923 -0
- braintools/metric/_firings_test.py +358 -0
- braintools/metric/_lfp.py +620 -0
- braintools/metric/_lfp_test.py +377 -0
- braintools/metric/_pariwise.py +114 -0
- braintools/metric/_ranking.py +300 -0
- braintools/metric/_ranking_test.py +242 -0
- braintools/metric/_regression.py +822 -0
- braintools/metric/_regression_test.py +131 -0
- braintools/metric/_smoothing.py +165 -0
- braintools/metric/_smoothing_test.py +54 -0
- braintools/metric/_util.py +25 -0
- braintools/optim/__init__.py +31 -0
- braintools/optim/_base.py +54 -0
- braintools/optim/_nevergrad_optimizer.py +342 -0
- braintools/optim/_nevergrad_optimizer_test.py +241 -0
- braintools/optim/_optax_lr_scheduler.py +4818 -0
- braintools/optim/_optax_lr_scheduler_test.py +1886 -0
- braintools/optim/_optax_optimizer.py +4781 -0
- braintools/optim/_optax_optimizer_test.py +3445 -0
- braintools/optim/_scipy_optimizer.py +482 -0
- braintools/optim/_scipy_optimizer_test.py +113 -0
- braintools/optim/_state_uniquifier.py +347 -0
- braintools/optim/_state_uniquifier_test.py +336 -0
- braintools/quad/__init__.py +53 -0
- braintools/quad/_dde_integrator.py +365 -0
- braintools/quad/_dde_integrator_test.py +206 -0
- braintools/quad/_imex_integrator.py +237 -0
- braintools/quad/_imex_integrator_test.py +161 -0
- braintools/quad/_ode_integrator.py +1179 -0
- braintools/quad/_ode_integrator_test.py +180 -0
- braintools/quad/_sde_integrator.py +621 -0
- braintools/quad/_sde_integrator_test.py +200 -0
- braintools/tree.py +514 -0
- braintools/tree_test.py +206 -0
- braintools/visualize/__init__.py +49 -0
- braintools/visualize/_animation.py +149 -0
- braintools/visualize/_colormaps.py +340 -0
- braintools/visualize/_colormaps_test.py +59 -0
- braintools/visualize/_figures.py +58 -0
- braintools/visualize/_interactive.py +898 -0
- braintools/visualize/_interactive_test.py +57 -0
- braintools/visualize/_neural.py +1083 -0
- braintools/visualize/_neural_test.py +116 -0
- braintools/visualize/_plots.py +628 -0
- braintools/visualize/_plots_test.py +72 -0
- braintools/visualize/_statistical.py +1094 -0
- braintools/visualize/_statistical_test.py +121 -0
- braintools/visualize/_style.py +82 -0
- braintools/visualize/_three_d.py +696 -0
- braintools/visualize/_three_d_test.py +63 -0
- braintools/visualize/_visualize_test.py +72 -0
- braintools-0.0.13.dist-info/METADATA +356 -0
- braintools-0.0.13.dist-info/RECORD +131 -0
- braintools-0.0.13.dist-info/WHEEL +5 -0
- braintools-0.0.13.dist-info/licenses/LICENSE +202 -0
- braintools-0.0.13.dist-info/top_level.txt +1 -0
braintools/__init__.py
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# Copyright 2024 BDP Ecosystem Limited. All Rights Reserved.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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# ==============================================================================
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__version__ = "0.0.13"
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__version_info__ = (0, 0, 13)
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from . import init
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from . import conn
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from . import file
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from . import input
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from . import metric
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from . import optim
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from . import quad
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from . import tree
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from . import visualize
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from ._spike_encoder import *
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from ._spike_encoder import __all__ as encoder_all
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from ._spike_operation import *
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from ._spike_operation import __all__ as operation_all
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from ._transform import *
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from ._transform import __all__ as transform_all
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__all__ = ['conn', 'input', 'init', 'file', 'metric', 'visualize', 'optim', 'tree', 'quad']
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__all__ = __all__ + encoder_all + transform_all + operation_all
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del encoder_all, transform_all, operation_all
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braintools/_misc.py
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# Copyright 2025 BDP Ecosystem Limited. All Rights Reserved.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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# ==============================================================================
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from typing import Callable, Any, Union, Sequence, Optional
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import brainstate
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import brainunit as u
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import jax
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def set_module_as(module: str):
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def wrapper(fun: callable):
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fun.__module__ = module
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return fun
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return wrapper
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def tree_map(f: Callable[..., Any], tree: Any, *rest: Any):
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return jax.tree.map(f, tree, *rest, is_leaf=u.math.is_quantity)
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def randn_like(y):
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return brainstate.random.randn(*u.math.shape(y))
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Initializer = Union[brainstate.typing.ArrayLike, Callable]
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InitializerOrNot = Optional[Union[brainstate.typing.ArrayLike, Callable]]
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