brainstate 0.1.0.post20250503__py2.py3-none-any.whl → 0.1.2__py2.py3-none-any.whl

brainstate/nn/_dynamics/_dynamics_base_test.py

@@ -15,47 +15,46 @@
 
 # -*- coding: utf-8 -*-
 
-from __future__ import annotations
 
 import unittest
 
 import numpy as np
 
-import brainstate as bst
+import brainstate
 
 
 class TestModuleGroup(unittest.TestCase):
     def test_initialization(self):
-        group = bst.nn.DynamicsGroup()
-        self.assertIsInstance(group, bst.nn.DynamicsGroup)
+        group = brainstate.nn.DynamicsGroup()
+        self.assertIsInstance(group, brainstate.nn.DynamicsGroup)
 
 
 class TestProjection(unittest.TestCase):
     def test_initialization(self):
-        proj = bst.nn.Projection()
-        self.assertIsInstance(proj, bst.nn.Projection)
+        proj = brainstate.nn.Projection()
+        self.assertIsInstance(proj, brainstate.nn.Projection)
 
     def test_update_not_implemented(self):
-        proj = bst.nn.Projection()
+        proj = brainstate.nn.Projection()
         with self.assertRaises(ValueError):
             proj.update()
 
 
 class TestDynamics(unittest.TestCase):
     def test_initialization(self):
-        dyn = bst.nn.Dynamics(in_size=10)
-        self.assertIsInstance(dyn, bst.nn.Dynamics)
+        dyn = brainstate.nn.Dynamics(in_size=10)
+        self.assertIsInstance(dyn, brainstate.nn.Dynamics)
         self.assertEqual(dyn.in_size, (10,))
         self.assertEqual(dyn.out_size, (10,))
 
     def test_size_validation(self):
         with self.assertRaises(ValueError):
-            bst.nn.Dynamics(in_size=[])
+            brainstate.nn.Dynamics(in_size=[])
         with self.assertRaises(ValueError):
-            bst.nn.Dynamics(in_size="invalid")
+            brainstate.nn.Dynamics(in_size="invalid")
 
     def test_input_handling(self):
-        dyn = bst.nn.Dynamics(in_size=10)
+        dyn = brainstate.nn.Dynamics(in_size=10)
         dyn.add_current_input("test_current", lambda: np.random.rand(10))
         dyn.add_delta_input("test_delta", lambda: np.random.rand(10))
 
@@ -63,15 +62,15 @@ class TestDynamics(unittest.TestCase):
         self.assertIn("test_delta", dyn.delta_inputs)
 
     def test_duplicate_input_key(self):
-        dyn = bst.nn.Dynamics(in_size=10)
+        dyn = brainstate.nn.Dynamics(in_size=10)
         dyn.add_current_input("test", lambda: np.random.rand(10))
         with self.assertRaises(ValueError):
             dyn.add_current_input("test", lambda: np.random.rand(10))
 
     def test_varshape(self):
-        dyn = bst.nn.Dynamics(in_size=(2, 3))
+        dyn = brainstate.nn.Dynamics(in_size=(2, 3))
         self.assertEqual(dyn.varshape, (2, 3))
-        dyn = bst.nn.Dynamics(in_size=(2, 3))
+        dyn = brainstate.nn.Dynamics(in_size=(2, 3))
         self.assertEqual(dyn.varshape, (2, 3))
 
 

brainstate/nn/_dynamics/_projection_base.py

@@ -12,7 +12,6 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 # ==============================================================================
-from __future__ import annotations
 
 from typing import Union, Callable, Optional
 

brainstate/nn/_dynamics/_state_delay.py

@@ -13,8 +13,6 @@
 # limitations under the License.
 # ==============================================================================
 
-from __future__ import annotations
-
 import math
 import numbers
 from functools import partial

brainstate/nn/_dynamics/_synouts.py

@@ -15,8 +15,6 @@
 
 # -*- coding: utf-8 -*-
 
-from __future__ import annotations
-
 import brainunit as u
 import jax.numpy as jnp
 

brainstate/nn/_dynamics/_synouts_test.py

@@ -13,7 +13,6 @@
 # limitations under the License.
 # ==============================================================================
 
-from __future__ import annotations
 
 import unittest
 
@@ -21,7 +20,7 @@ import brainunit as u
 import jax.numpy as jnp
 import numpy as np
 
-import brainstate as bst
+import brainstate
 
 
 class TestSynOutModels(unittest.TestCase):
@@ -35,19 +34,19 @@ class TestSynOutModels(unittest.TestCase):
         self.V_offset = jnp.array([0.0])
 
     def test_COBA(self):
-        model = bst.nn.COBA(E=self.E)
+        model = brainstate.nn.COBA(E=self.E)
         output = model.update(self.conductance, self.potential)
         expected_output = self.conductance * (self.E - self.potential)
         np.testing.assert_array_almost_equal(output, expected_output)
 
     def test_CUBA(self):
-        model = bst.nn.CUBA()
+        model = brainstate.nn.CUBA()
         output = model.update(self.conductance)
         expected_output = self.conductance * model.scale
         self.assertTrue(u.math.allclose(output, expected_output))
 
     def test_MgBlock(self):
-        model = bst.nn.MgBlock(E=self.E, cc_Mg=self.cc_Mg, alpha=self.alpha, beta=self.beta, V_offset=self.V_offset)
+        model = brainstate.nn.MgBlock(E=self.E, cc_Mg=self.cc_Mg, alpha=self.alpha, beta=self.beta, V_offset=self.V_offset)
         output = model.update(self.conductance, self.potential)
         norm = (1 + self.cc_Mg / self.beta * jnp.exp(self.alpha * (self.V_offset - self.potential)))
         expected_output = self.conductance * (self.E - self.potential) / norm

brainstate/nn/_elementwise/_dropout.py

@@ -14,8 +14,6 @@
 # ==============================================================================
 
 
-from __future__ import annotations
-
 from functools import partial
 from typing import Optional, Sequence
 

brainstate/nn/_elementwise/_dropout_test.py

@@ -18,19 +18,19 @@ import unittest
 
 import numpy as np
 
-import brainstate as bst
+import brainstate
 
 
 class TestDropout(unittest.TestCase):
 
     def test_dropout(self):
         # Create a Dropout layer with a dropout rate of 0.5
-        dropout_layer = bst.nn.Dropout(0.5)
+        dropout_layer = brainstate.nn.Dropout(0.5)
 
         # Input data
         input_data = np.arange(20)
 
-        with bst.environ.context(fit=True):
+        with brainstate.environ.context(fit=True):
             # Apply dropout
             output_data = dropout_layer(input_data)
 
@@ -47,10 +47,10 @@ class TestDropout(unittest.TestCase):
             np.testing.assert_almost_equal(non_zero_elements, expected_non_zero_elements)
 
     def test_DropoutFixed(self):
-        dropout_layer = bst.nn.DropoutFixed(in_size=(2, 3), prob=0.5)
+        dropout_layer = brainstate.nn.DropoutFixed(in_size=(2, 3), prob=0.5)
         dropout_layer.init_state(batch_size=2)
         input_data = np.random.randn(2, 2, 3)
-        with bst.environ.context(fit=True):
+        with brainstate.environ.context(fit=True):
             output_data = dropout_layer.update(input_data)
         self.assertEqual(input_data.shape, output_data.shape)
         self.assertTrue(np.any(output_data == 0))
@@ -72,9 +72,9 @@ class TestDropout(unittest.TestCase):
     #     np.testing.assert_almost_equal(non_zero_elements, expected_non_zero_elements, decimal=4)
 
     def test_Dropout2d(self):
-        dropout_layer = bst.nn.Dropout2d(prob=0.5)
+        dropout_layer = brainstate.nn.Dropout2d(prob=0.5)
         input_data = np.random.randn(2, 3, 4, 5)
-        with bst.environ.context(fit=True):
+        with brainstate.environ.context(fit=True):
             output_data = dropout_layer(input_data)
         self.assertEqual(input_data.shape, output_data.shape)
         self.assertTrue(np.any(output_data == 0))
@@ -84,9 +84,9 @@ class TestDropout(unittest.TestCase):
         np.testing.assert_almost_equal(non_zero_elements, expected_non_zero_elements, decimal=4)
 
     def test_Dropout3d(self):
-        dropout_layer = bst.nn.Dropout3d(prob=0.5)
+        dropout_layer = brainstate.nn.Dropout3d(prob=0.5)
         input_data = np.random.randn(2, 3, 4, 5, 6)
-        with bst.environ.context(fit=True):
+        with brainstate.environ.context(fit=True):
             output_data = dropout_layer(input_data)
         self.assertEqual(input_data.shape, output_data.shape)
         self.assertTrue(np.any(output_data == 0))

brainstate/nn/_elementwise/_elementwise.py

@@ -15,8 +15,6 @@
 
 # -*- coding: utf-8 -*-
 
-from __future__ import annotations
-
 from typing import Optional
 
 import brainunit as u

brainstate/nn/_elementwise/_elementwise_test.py

@@ -13,157 +13,155 @@
 # limitations under the License.
 # ==============================================================================
 
-from __future__ import annotations
-
 from absl.testing import absltest
 from absl.testing import parameterized
 
-import brainstate as bst
+import brainstate
 
 
 class Test_Activation(parameterized.TestCase):
 
     def test_Threshold(self):
-        threshold_layer = bst.nn.Threshold(5, 20)
-        input = bst.random.randn(2)
+        threshold_layer = brainstate.nn.Threshold(5, 20)
+        input = brainstate.random.randn(2)
         output = threshold_layer(input)
 
     def test_ReLU(self):
-        ReLU_layer = bst.nn.ReLU()
-        input = bst.random.randn(2)
+        ReLU_layer = brainstate.nn.ReLU()
+        input = brainstate.random.randn(2)
         output = ReLU_layer(input)
 
     def test_RReLU(self):
-        RReLU_layer = bst.nn.RReLU(lower=0, upper=1)
-        input = bst.random.randn(2)
+        RReLU_layer = brainstate.nn.RReLU(lower=0, upper=1)
+        input = brainstate.random.randn(2)
         output = RReLU_layer(input)
 
     def test_Hardtanh(self):
-        Hardtanh_layer = bst.nn.Hardtanh(min_val=0, max_val=1, )
-        input = bst.random.randn(2)
+        Hardtanh_layer = brainstate.nn.Hardtanh(min_val=0, max_val=1, )
+        input = brainstate.random.randn(2)
         output = Hardtanh_layer(input)
 
     def test_ReLU6(self):
-        ReLU6_layer = bst.nn.ReLU6()
-        input = bst.random.randn(2)
+        ReLU6_layer = brainstate.nn.ReLU6()
+        input = brainstate.random.randn(2)
         output = ReLU6_layer(input)
 
     def test_Sigmoid(self):
-        Sigmoid_layer = bst.nn.Sigmoid()
-        input = bst.random.randn(2)
+        Sigmoid_layer = brainstate.nn.Sigmoid()
+        input = brainstate.random.randn(2)
         output = Sigmoid_layer(input)
 
     def test_Hardsigmoid(self):
-        Hardsigmoid_layer = bst.nn.Hardsigmoid()
-        input = bst.random.randn(2)
+        Hardsigmoid_layer = brainstate.nn.Hardsigmoid()
+        input = brainstate.random.randn(2)
         output = Hardsigmoid_layer(input)
 
     def test_Tanh(self):
-        Tanh_layer = bst.nn.Tanh()
-        input = bst.random.randn(2)
+        Tanh_layer = brainstate.nn.Tanh()
+        input = brainstate.random.randn(2)
         output = Tanh_layer(input)
 
     def test_SiLU(self):
-        SiLU_layer = bst.nn.SiLU()
-        input = bst.random.randn(2)
+        SiLU_layer = brainstate.nn.SiLU()
+        input = brainstate.random.randn(2)
         output = SiLU_layer(input)
 
     def test_Mish(self):
-        Mish_layer = bst.nn.Mish()
-        input = bst.random.randn(2)
+        Mish_layer = brainstate.nn.Mish()
+        input = brainstate.random.randn(2)
         output = Mish_layer(input)
 
     def test_Hardswish(self):
-        Hardswish_layer = bst.nn.Hardswish()
-        input = bst.random.randn(2)
+        Hardswish_layer = brainstate.nn.Hardswish()
+        input = brainstate.random.randn(2)
         output = Hardswish_layer(input)
 
     def test_ELU(self):
-        ELU_layer = bst.nn.ELU(alpha=0.5, )
-        input = bst.random.randn(2)
+        ELU_layer = brainstate.nn.ELU(alpha=0.5, )
+        input = brainstate.random.randn(2)
         output = ELU_layer(input)
 
     def test_CELU(self):
-        CELU_layer = bst.nn.CELU(alpha=0.5, )
-        input = bst.random.randn(2)
+        CELU_layer = brainstate.nn.CELU(alpha=0.5, )
+        input = brainstate.random.randn(2)
         output = CELU_layer(input)
 
     def test_SELU(self):
-        SELU_layer = bst.nn.SELU()
-        input = bst.random.randn(2)
+        SELU_layer = brainstate.nn.SELU()
+        input = brainstate.random.randn(2)
         output = SELU_layer(input)
 
     def test_GLU(self):
-        GLU_layer = bst.nn.GLU()
-        input = bst.random.randn(4, 2)
+        GLU_layer = brainstate.nn.GLU()
+        input = brainstate.random.randn(4, 2)
         output = GLU_layer(input)
 
     @parameterized.product(
         approximate=['tanh', 'none']
     )
     def test_GELU(self, approximate):
-        GELU_layer = bst.nn.GELU()
-        input = bst.random.randn(2)
+        GELU_layer = brainstate.nn.GELU()
+        input = brainstate.random.randn(2)
         output = GELU_layer(input)
 
     def test_Hardshrink(self):
-        Hardshrink_layer = bst.nn.Hardshrink(lambd=1)
-        input = bst.random.randn(2)
+        Hardshrink_layer = brainstate.nn.Hardshrink(lambd=1)
+        input = brainstate.random.randn(2)
         output = Hardshrink_layer(input)
 
     def test_LeakyReLU(self):
-        LeakyReLU_layer = bst.nn.LeakyReLU()
-        input = bst.random.randn(2)
+        LeakyReLU_layer = brainstate.nn.LeakyReLU()
+        input = brainstate.random.randn(2)
         output = LeakyReLU_layer(input)
 
     def test_LogSigmoid(self):
-        LogSigmoid_layer = bst.nn.LogSigmoid()
-        input = bst.random.randn(2)
+        LogSigmoid_layer = brainstate.nn.LogSigmoid()
+        input = brainstate.random.randn(2)
         output = LogSigmoid_layer(input)
 
     def test_Softplus(self):
-        Softplus_layer = bst.nn.Softplus()
-        input = bst.random.randn(2)
+        Softplus_layer = brainstate.nn.Softplus()
+        input = brainstate.random.randn(2)
         output = Softplus_layer(input)
 
     def test_Softshrink(self):
-        Softshrink_layer = bst.nn.Softshrink(lambd=1)
-        input = bst.random.randn(2)
+        Softshrink_layer = brainstate.nn.Softshrink(lambd=1)
+        input = brainstate.random.randn(2)
         output = Softshrink_layer(input)
 
     def test_PReLU(self):
-        PReLU_layer = bst.nn.PReLU(num_parameters=2, init=0.5)
-        input = bst.random.randn(2)
+        PReLU_layer = brainstate.nn.PReLU(num_parameters=2, init=0.5)
+        input = brainstate.random.randn(2)
         output = PReLU_layer(input)
 
     def test_Softsign(self):
-        Softsign_layer = bst.nn.Softsign()
-        input = bst.random.randn(2)
+        Softsign_layer = brainstate.nn.Softsign()
+        input = brainstate.random.randn(2)
         output = Softsign_layer(input)
 
     def test_Tanhshrink(self):
-        Tanhshrink_layer = bst.nn.Tanhshrink()
-        input = bst.random.randn(2)
+        Tanhshrink_layer = brainstate.nn.Tanhshrink()
+        input = brainstate.random.randn(2)
         output = Tanhshrink_layer(input)
 
     def test_Softmin(self):
-        Softmin_layer = bst.nn.Softmin(dim=2)
-        input = bst.random.randn(2, 3, 4)
+        Softmin_layer = brainstate.nn.Softmin(dim=2)
+        input = brainstate.random.randn(2, 3, 4)
         output = Softmin_layer(input)
 
     def test_Softmax(self):
-        Softmax_layer = bst.nn.Softmax(dim=2)
-        input = bst.random.randn(2, 3, 4)
+        Softmax_layer = brainstate.nn.Softmax(dim=2)
+        input = brainstate.random.randn(2, 3, 4)
         output = Softmax_layer(input)
 
     def test_Softmax2d(self):
-        Softmax2d_layer = bst.nn.Softmax2d()
-        input = bst.random.randn(2, 3, 12, 13)
+        Softmax2d_layer = brainstate.nn.Softmax2d()
+        input = brainstate.random.randn(2, 3, 12, 13)
         output = Softmax2d_layer(input)
 
     def test_LogSoftmax(self):
-        LogSoftmax_layer = bst.nn.LogSoftmax(dim=2)
-        input = bst.random.randn(2, 3, 4)
+        LogSoftmax_layer = brainstate.nn.LogSoftmax(dim=2)
+        input = brainstate.random.randn(2, 3, 4)
         output = LogSoftmax_layer(input)
 
 

brainstate/nn/_event/_fixedprob_mv.py

@@ -13,7 +13,6 @@
 # limitations under the License.
 # ==============================================================================
 
-from __future__ import annotations
 
 from typing import Union, Callable, Optional
 

brainstate/nn/_event/_fixedprob_mv_test.py

@@ -13,7 +13,6 @@
 # limitations under the License.
 # ==============================================================================
 
-from __future__ import annotations
 
 import jax.numpy
 import jax.numpy as jnp

brainstate/nn/_event/_linear_mv.py

@@ -13,8 +13,6 @@
 # limitations under the License.
 # ==============================================================================
 
-from __future__ import annotations
-
 from typing import Union, Callable, Optional
 
 import brainunit as u

brainstate/nn/_event/_linear_mv_test.py

@@ -13,7 +13,6 @@
 # limitations under the License.
 # ==============================================================================
 
-from __future__ import annotations
 
 import jax
 import jax.numpy as jnp

brainstate/nn/_exp_euler.py

@@ -14,8 +14,6 @@
 # ==============================================================================
 
 
-from __future__ import annotations
-
 from typing import Callable
 
 import brainunit as u

brainstate/nn/_exp_euler_test.py

@@ -13,13 +13,12 @@
 # limitations under the License.
 # ==============================================================================
 
-from __future__ import annotations
 
 import unittest
 
 import brainunit as u
 
-import brainstate as bst
+import brainstate
 
 
 class TestExpEuler(unittest.TestCase):
@@ -27,10 +26,10 @@ class TestExpEuler(unittest.TestCase):
         def fun(x, tau):
             return -x / tau
 
-        with bst.environ.context(dt=0.1):
+        with brainstate.environ.context(dt=0.1):
             with self.assertRaises(AssertionError):
-                r = bst.nn.exp_euler_step(fun, 1.0 * u.mV, 1. * u.ms)
+                r = brainstate.nn.exp_euler_step(fun, 1.0 * u.mV, 1. * u.ms)
 
-        with bst.environ.context(dt=1. * u.ms):
-            r = bst.nn.exp_euler_step(fun, 1.0 * u.mV, 1. * u.ms)
+        with brainstate.environ.context(dt=1. * u.ms):
+            r = brainstate.nn.exp_euler_step(fun, 1.0 * u.mV, 1. * u.ms)
             print(r)

brainstate/nn/_interaction/_conv.py

@@ -15,8 +15,6 @@
 
 # -*- coding: utf-8 -*-
 
-from __future__ import annotations
-
 import collections.abc
 from typing import Callable, Tuple, Union, Sequence, Optional, TypeVar