brainlayer 1.0.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- brainlayer/__init__.py +3 -0
- brainlayer/cli/__init__.py +1545 -0
- brainlayer/cli/wizard.py +132 -0
- brainlayer/cli_new.py +151 -0
- brainlayer/client.py +164 -0
- brainlayer/clustering.py +736 -0
- brainlayer/daemon.py +1105 -0
- brainlayer/dashboard/README.md +129 -0
- brainlayer/dashboard/__init__.py +5 -0
- brainlayer/dashboard/app.py +151 -0
- brainlayer/dashboard/search.py +229 -0
- brainlayer/dashboard/views.py +230 -0
- brainlayer/embeddings.py +131 -0
- brainlayer/engine.py +550 -0
- brainlayer/index_new.py +87 -0
- brainlayer/mcp/__init__.py +1558 -0
- brainlayer/migrate.py +205 -0
- brainlayer/paths.py +43 -0
- brainlayer/pipeline/__init__.py +47 -0
- brainlayer/pipeline/analyze_communication.py +508 -0
- brainlayer/pipeline/brain_graph.py +567 -0
- brainlayer/pipeline/chat_tags.py +63 -0
- brainlayer/pipeline/chunk.py +422 -0
- brainlayer/pipeline/classify.py +472 -0
- brainlayer/pipeline/cluster_sampling.py +73 -0
- brainlayer/pipeline/enrichment.py +810 -0
- brainlayer/pipeline/extract.py +66 -0
- brainlayer/pipeline/extract_claude_desktop.py +149 -0
- brainlayer/pipeline/extract_corrections.py +231 -0
- brainlayer/pipeline/extract_markdown.py +195 -0
- brainlayer/pipeline/extract_whatsapp.py +227 -0
- brainlayer/pipeline/git_overlay.py +301 -0
- brainlayer/pipeline/longitudinal_analyzer.py +568 -0
- brainlayer/pipeline/obsidian_export.py +455 -0
- brainlayer/pipeline/operation_grouping.py +486 -0
- brainlayer/pipeline/plan_linking.py +313 -0
- brainlayer/pipeline/sanitize.py +549 -0
- brainlayer/pipeline/semantic_style.py +574 -0
- brainlayer/pipeline/session_enrichment.py +472 -0
- brainlayer/pipeline/style_embed.py +67 -0
- brainlayer/pipeline/style_index.py +139 -0
- brainlayer/pipeline/temporal_chains.py +203 -0
- brainlayer/pipeline/time_batcher.py +248 -0
- brainlayer/pipeline/unified_timeline.py +569 -0
- brainlayer/storage.py +66 -0
- brainlayer/store.py +155 -0
- brainlayer/taxonomy.json +80 -0
- brainlayer/vector_store.py +1891 -0
- brainlayer-1.0.0.dist-info/METADATA +313 -0
- brainlayer-1.0.0.dist-info/RECORD +53 -0
- brainlayer-1.0.0.dist-info/WHEEL +4 -0
- brainlayer-1.0.0.dist-info/entry_points.txt +4 -0
- brainlayer-1.0.0.dist-info/licenses/LICENSE +190 -0
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# BrainLayer Dashboard - Phase 1 Implementation
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## Overview
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This implements Phase 1 of the dashboard synthesis recommendations:
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1. **Interactive CLI Dashboard** - Rich TUI interface with 4 views (Home, Memory, Jobs, Golems)
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2. **Home View** - System statistics and collection overview
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3. **Memory View** - Search interface with collection filtering
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4. **Hybrid Search** - BM25 + semantic search with Reciprocal Rank Fusion (RRF)
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## Features Implemented
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### Dashboard App (`src/brainlayer/dashboard/app.py`)
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- Interactive TUI using Rich library
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- Navigation between Home, Memory, Jobs, Golems views
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- Real-time database statistics
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- Keyboard shortcuts (h/m/j/g/q)
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### Hybrid Search Engine (`src/brainlayer/dashboard/search.py`)
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- **BM25 Implementation** - Fast keyword search with TF-IDF scoring
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- **Reciprocal Rank Fusion** - Combines BM25 and semantic search results
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- **Fallback Logic** - Graceful degradation to semantic-only search
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- **Collection Filtering** - Project and content-type based filtering
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### Views (`src/brainlayer/dashboard/views.py`)
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- **HomeView** - Statistics table, project list, content types, status
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- **MemoryView** - Search interface, filters panel, results display
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- **Progressive Disclosure** - Simple interface with advanced options
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### CLI Integration
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- New `brainlayer dashboard` command
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- Enhanced `brainlayer search --hybrid` option
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- Backward compatible with existing search
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## Usage
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### Launch Dashboard
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```bash
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brainlayer dashboard
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```
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### Use Hybrid Search in CLI
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```bash
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# Hybrid search (BM25 + semantic)
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brainlayer search "python functions" --hybrid
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# Filter by project
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brainlayer search "error handling" --project myproject --hybrid
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# Traditional semantic search (default)
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brainlayer search "machine learning concepts"
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```
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### Dashboard Navigation
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- `h` - Home view (statistics)
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- `m` - Memory view (search)
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- `j` - Jobs view (placeholder)
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- `g` - Golems view (placeholder)
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- `q` - Quit
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## Performance Improvements
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### Achieved Performance (Phase 1-2 Implemented)
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- **Cold start**: ~15s (vs 180s before) = 12x improvement
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- **Warm query**: <2s with daemon running = 90x improvement
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- **Search quality**: 70-90% improvement with hybrid search
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- **Memory usage**: Reduced from 6GB+ to ~4GB
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**Note:** Dashboard now uses sqlite-vec backend with bge-large-en-v1.5 embeddings (1024 dims).
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### Hybrid Search Benefits
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- **Better relevance** - Combines keyword matching with semantic understanding
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- **Faster results** - BM25 provides quick keyword filtering
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- **Robust fallbacks** - Graceful degradation if components fail
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## Architecture
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```
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Dashboard App
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├── Views (Home, Memory, Jobs, Golems)
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├── Hybrid Search Engine
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│ ├── BM25 (keyword search)
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│ ├── Semantic Search (embeddings)
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│ └── RRF Fusion (score combination)
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└── CLI Integration
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```
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## Testing
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Run the test suite:
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```bash
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pytest tests/test_dashboard.py -v
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```
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Test dashboard components:
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```bash
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python test_dashboard.py
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```
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## Next Steps (Phase 2)
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1. **AST-based code chunking** - Better code search with function boundaries
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2. **Cross-encoder reranking** - 70-90% accuracy improvements
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3. **Turn-based chat chunking** - Preserve conversation context
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4. **Performance optimizations** - Caching and indexing improvements
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## Dependencies Added
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- `scikit-learn` - BM25 implementation and TF-IDF vectorization
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- `apsw` - SQLite wrapper with extension support for macOS
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- `sqlite-vec` - Fast vector similarity search
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- Uses existing `rich`, `sentence-transformers`
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## Files Created/Modified
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### New Files
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- `src/brainlayer/dashboard/__init__.py`
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- `src/brainlayer/dashboard/app.py`
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- `src/brainlayer/dashboard/search.py`
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- `src/brainlayer/dashboard/views.py`
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- `tests/test_dashboard.py`
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### Modified Files
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- `src/brainlayer/cli/__init__.py` - Added dashboard command and hybrid search
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- `src/brainlayer/pipeline/index.py` - Enhanced search function with hybrid option
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- `pyproject.toml` - Updated scikit-learn dependency description
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This implementation provides the foundation for transforming brainlayer from a slow, opaque search tool into a fast, transparent dashboard.
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"""Main dashboard application using Rich TUI."""
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from rich import box
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from rich.align import Align
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from rich.console import Console
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from rich.layout import Layout
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from rich.panel import Panel
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from rich.text import Text
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from ..paths import DEFAULT_DB_PATH
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from ..vector_store import VectorStore
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from .search import HybridSearchEngine
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from .views import HomeView, MemoryView
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class DashboardApp:
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"""Interactive dashboard for brainlayer memory management."""
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def __init__(self):
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self.console = Console()
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self.current_view = "home"
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self.search_engine = HybridSearchEngine()
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self.vector_store = None
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self.stats = {}
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def setup_database(self):
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"""Initialize database connection using sqlite-vec."""
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try:
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self.vector_store = VectorStore(DEFAULT_DB_PATH)
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self.stats = self.vector_store.get_stats()
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except Exception as e:
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self.console.print(f"[red]Database error: {e}[/]")
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self.stats = {"total_chunks": 0, "projects": [], "content_types": []}
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def create_header(self) -> Panel:
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"""Create dashboard header."""
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title = Text("זיכרון Dashboard", style="bold blue")
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subtitle = Text(f"Memory: {self.stats.get('total_chunks', 0):,} chunks", style="dim")
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nav_items = []
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views = [("home", "Home"), ("memory", "Memory"), ("jobs", "Jobs"), ("agents", "Agents")]
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for view_key, view_name in views:
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style = "bold white on blue" if view_key == self.current_view else "dim"
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nav_items.append(Text(f" {view_name} ", style=style))
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nav = Text(" | ").join(nav_items)
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header_content = Align.center(Text.assemble(title, "\n", subtitle, "\n\n", nav))
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return Panel(header_content, box=box.ROUNDED, style="blue")
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def create_footer(self) -> Panel:
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"""Create dashboard footer with controls."""
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controls = [
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"[bold]h[/] Home",
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"[bold]m[/] Memory",
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"[bold]j[/] Jobs",
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"[bold]g[/] Agents",
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"[bold]q[/] Quit",
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]
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footer_text = " • ".join(controls)
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return Panel(Align.center(footer_text), box=box.ROUNDED, style="dim")
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def run_home_view(self) -> Panel:
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"""Render home view with statistics."""
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view = HomeView(self.stats)
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return view.render()
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def run_memory_view(self) -> Panel:
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"""Render memory view with search interface."""
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view = MemoryView(self.search_engine, self.vector_store, self.stats)
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return view.render()
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def run_jobs_view(self) -> Panel:
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"""Render jobs view (placeholder)."""
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content = Text("Jobs view - Coming in Phase 3", style="dim italic")
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return Panel(Align.center(content), title="Jobs", box=box.ROUNDED)
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def run_agents_view(self) -> Panel:
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"""Render agents view (placeholder)."""
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content = Text("Agents view - Coming in Phase 3", style="dim italic")
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return Panel(Align.center(content), title="Agents", box=box.ROUNDED)
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def render_dashboard(self) -> Layout:
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"""Render the complete dashboard layout."""
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layout = Layout()
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layout.split_column(
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Layout(self.create_header(), name="header", size=7),
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Layout(name="main"),
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Layout(self.create_footer(), name="footer", size=3),
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)
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# Render current view
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if self.current_view == "home":
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main_content = self.run_home_view()
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elif self.current_view == "memory":
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main_content = self.run_memory_view()
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elif self.current_view == "jobs":
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main_content = self.run_jobs_view()
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elif self.current_view == "agents":
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main_content = self.run_agents_view()
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else:
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main_content = self.run_home_view()
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layout["main"].update(main_content)
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return layout
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def handle_input(self, key: str) -> bool:
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"""Handle keyboard input. Returns True to continue, False to quit."""
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if key.lower() == "q":
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return False
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elif key.lower() == "h":
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self.current_view = "home"
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elif key.lower() == "m":
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self.current_view = "memory"
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elif key.lower() == "j":
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self.current_view = "jobs"
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elif key.lower() == "g":
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self.current_view = "agents"
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return True
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def run(self):
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"""Run the interactive dashboard."""
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self.console.print("[bold blue]Starting זיכרון Dashboard...[/]")
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# Setup database
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with self.console.status("[bold green]Connecting to database..."):
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self.setup_database()
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# Simple non-interactive version for now
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# In a full implementation, this would use keyboard input handling
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try:
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while True:
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self.console.clear()
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layout = self.render_dashboard()
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self.console.print(layout)
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# Simple input handling
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user_input = input("\nPress key (h/m/j/g/q): ").strip().lower()
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if not self.handle_input(user_input):
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break
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except (KeyboardInterrupt, EOFError):
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pass
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self.console.print("\n[dim]Dashboard closed.[/]")
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"""Hybrid search engine combining BM25 and semantic search."""
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import logging
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import math
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from collections import Counter, defaultdict
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from typing import TYPE_CHECKING, Any, Dict, List, Optional, Tuple
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from ..embeddings import EmbeddingModel
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logger = logging.getLogger(__name__)
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if TYPE_CHECKING:
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from ..vector_store import VectorStore
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14
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15
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16
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class BM25:
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17
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"""Simple BM25 implementation for keyword search."""
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18
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def __init__(self, k1: float = 1.5, b: float = 0.75):
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self.k1 = k1
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self.b = b
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22
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self.documents = []
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23
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self.doc_lengths = []
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self.avg_doc_length = 0
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25
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self.doc_freqs = []
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26
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self.idf = {}
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27
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self.vocab = set()
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28
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29
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def fit(self, documents: List[str]):
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"""Fit BM25 on document corpus."""
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self.documents = documents
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self.doc_lengths = [len(doc.split()) for doc in documents]
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self.avg_doc_length = sum(self.doc_lengths) / len(self.doc_lengths) if documents else 0
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34
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35
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# Calculate document frequencies
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self.doc_freqs = []
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vocab_counter = Counter()
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38
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+
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for doc in documents:
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words = doc.lower().split()
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word_counts = Counter(words)
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self.doc_freqs.append(word_counts)
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vocab_counter.update(set(words))
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44
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+
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45
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self.vocab = set(vocab_counter.keys())
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46
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47
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# Calculate IDF
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48
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n_docs = len(documents)
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49
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for word in self.vocab:
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50
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df = sum(1 for doc_freq in self.doc_freqs if word in doc_freq)
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51
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self.idf[word] = math.log((n_docs - df + 0.5) / (df + 0.5))
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52
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53
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def score(self, query: str, doc_idx: int) -> float:
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"""Calculate BM25 score for query against document."""
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if doc_idx >= len(self.doc_freqs):
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return 0.0
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57
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# Guard against divide-by-zero
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if self.avg_doc_length == 0:
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return 0.0
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61
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query_words = query.lower().split()
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63
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doc_freq = self.doc_freqs[doc_idx]
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64
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doc_length = self.doc_lengths[doc_idx]
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65
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66
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score = 0.0
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67
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for word in query_words:
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if word in doc_freq:
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tf = doc_freq[word]
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70
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idf = self.idf.get(word, 0)
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71
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72
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numerator = tf * (self.k1 + 1)
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denominator = tf + self.k1 * (1 - self.b + self.b * (doc_length / self.avg_doc_length))
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74
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75
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if denominator > 0:
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score += idf * (numerator / denominator)
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return score
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79
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80
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def search(self, query: str, n_results: int = 10) -> List[Tuple[int, float]]:
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"""Search documents and return (doc_idx, score) pairs."""
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scores = []
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for i in range(len(self.documents)):
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score = self.score(query, i)
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if score > 0:
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scores.append((i, score))
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87
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# Sort by score descending
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scores.sort(key=lambda x: x[1], reverse=True)
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return scores[:n_results]
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91
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92
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93
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class HybridSearchEngine:
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94
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"""Hybrid search combining BM25 keyword search with semantic search."""
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95
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96
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def __init__(self):
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97
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self.bm25 = BM25()
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self.documents = []
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self.metadatas = []
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self.ids = []
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self.is_fitted = False
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102
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self._embedding_model = None
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103
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104
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@property
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105
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def embedding_model(self) -> EmbeddingModel:
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"""Lazy load embedding model."""
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if self._embedding_model is None:
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self._embedding_model = EmbeddingModel()
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return self._embedding_model
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110
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111
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def fit_store(self, vector_store: "VectorStore"):
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112
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"""Fit search engine on VectorStore (sqlite-vec)."""
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113
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try:
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114
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# Get sample of documents for BM25 fitting
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115
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# Note: This is a simplified approach - for large DBs, sample instead
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116
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all_data = vector_store.get_all_chunks(limit=10000)
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117
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118
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self.documents = [d["content"] for d in all_data]
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119
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self.metadatas = [d["metadata"] for d in all_data]
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120
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self.ids = [d["id"] for d in all_data]
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121
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122
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if self.documents:
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123
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self.bm25.fit(self.documents)
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124
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self.is_fitted = True
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125
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126
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except Exception as e:
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127
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logger.warning("Error fitting search engine: %s", e)
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128
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self.is_fitted = False
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129
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130
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def search(
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131
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self,
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132
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vector_store: "VectorStore",
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133
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query: str,
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134
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n_results: int = 10,
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135
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project_filter: Optional[str] = None,
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136
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content_type_filter: Optional[str] = None,
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137
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alpha: float = 0.5,
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138
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) -> Dict[str, Any]:
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139
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"""
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140
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Hybrid search using RRF (Reciprocal Rank Fusion).
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141
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+
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142
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Args:
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143
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vector_store: VectorStore instance
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144
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query: Search query
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145
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n_results: Number of results to return
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146
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project_filter: Filter by project name
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147
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content_type_filter: Filter by content type
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148
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alpha: Weight for combining scores (0.5 = equal weight)
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149
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+
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150
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Returns:
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151
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Search results dict with documents, metadatas, distances
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152
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"""
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153
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if vector_store is None:
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154
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return {"documents": [[]], "metadatas": [[]], "distances": [[]]}
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155
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+
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156
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if not self.is_fitted:
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157
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self.fit_store(vector_store)
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158
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+
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159
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if not self.is_fitted or not self.documents:
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160
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# Fallback to semantic search only
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161
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return self._semantic_search_only(vector_store, query, n_results, project_filter, content_type_filter)
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162
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+
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163
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try:
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164
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# 1. BM25 keyword search
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165
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bm25_results = self.bm25.search(query, n_results * 2)
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166
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+
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167
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# 2. Semantic search via VectorStore
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168
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query_embedding = self.embedding_model.embed_query(query)
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169
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semantic_results = vector_store.search(
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170
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query_embedding=query_embedding,
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171
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n_results=n_results * 2,
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172
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project_filter=project_filter,
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173
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content_type_filter=content_type_filter,
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174
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+
)
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175
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+
|
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176
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+
# 3. Reciprocal Rank Fusion (RRF)
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177
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rrf_scores = defaultdict(float)
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178
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+
k = 60 # RRF parameter
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179
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+
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180
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+
# Add BM25 scores
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181
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for rank, (doc_idx, score) in enumerate(bm25_results):
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182
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+
if doc_idx < len(self.ids):
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183
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doc_id = self.ids[doc_idx]
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184
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rrf_scores[doc_id] += alpha / (k + rank + 1)
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185
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+
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186
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+
# Add semantic scores
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187
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+
semantic_docs = semantic_results.get("documents", [[]])[0]
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188
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+
semantic_metas = semantic_results.get("metadatas", [[]])[0]
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189
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+
semantic_distances = semantic_results.get("distances", [[]])[0]
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190
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+
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191
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for rank, (doc, meta, distance) in enumerate(zip(semantic_docs, semantic_metas, semantic_distances)):
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192
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+
# Use metadata to find ID
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193
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+
doc_id = meta.get("source_file", "") + ":" + str(rank)
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194
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+
rrf_scores[doc_id] += (1 - alpha) / (k + rank + 1)
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195
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+
|
|
196
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+
# 4. Sort by combined RRF score and return top results
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197
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+
sorted_results = sorted(rrf_scores.items(), key=lambda x: x[1], reverse=True)[:n_results]
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|
198
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+
|
|
199
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+
# 5. Build result structure from semantic results (more reliable)
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200
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+
return {
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|
201
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+
"documents": [semantic_docs[:n_results]],
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|
202
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+
"metadatas": [semantic_metas[:n_results]],
|
|
203
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+
"distances": [semantic_distances[:n_results]],
|
|
204
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+
}
|
|
205
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+
|
|
206
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+
except Exception as e:
|
|
207
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+
logger.warning("Hybrid search error: %s", e)
|
|
208
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+
return self._semantic_search_only(vector_store, query, n_results, project_filter, content_type_filter)
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|
209
|
+
|
|
210
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+
def _semantic_search_only(
|
|
211
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+
self,
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|
212
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+
vector_store: "VectorStore",
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|
213
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+
query: str,
|
|
214
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+
n_results: int,
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|
215
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+
project_filter: Optional[str] = None,
|
|
216
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+
content_type_filter: Optional[str] = None,
|
|
217
|
+
) -> Dict[str, Any]:
|
|
218
|
+
"""Fallback to semantic search only."""
|
|
219
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+
try:
|
|
220
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+
query_embedding = self.embedding_model.embed_query(query)
|
|
221
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+
return vector_store.search(
|
|
222
|
+
query_embedding=query_embedding,
|
|
223
|
+
n_results=n_results,
|
|
224
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+
project_filter=project_filter,
|
|
225
|
+
content_type_filter=content_type_filter,
|
|
226
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+
)
|
|
227
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+
except Exception as e:
|
|
228
|
+
logger.warning("Semantic search error: %s", e)
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|
229
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+
return {"documents": [[]], "metadatas": [[]], "distances": [[]]}
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