boris-behav-obs 8.16.5__py3-none-any.whl → 9.7.1__py3-none-any.whl

boris/add_modifier_ui.py

@@ -1,181 +1,285 @@
 # -*- coding: utf-8 -*-
 
-# Form implementation generated from reading ui file 'add_modifier.ui'
-#
-# Created by: PyQt5 UI code generator 5.15.7
-#
-# WARNING: Any manual changes made to this file will be lost when pyuic5 is
-# run again.  Do not edit this file unless you know what you are doing.
-
-
-from PyQt5 import QtCore, QtGui, QtWidgets
+################################################################################
+## Form generated from reading UI file 'add_modifier.ui'
+##
+## Created by: Qt User Interface Compiler version 6.8.0
+##
+## WARNING! All changes made in this file will be lost when recompiling UI file!
+################################################################################
 
+from PySide6.QtCore import (QCoreApplication, QDate, QDateTime, QLocale,
+    QMetaObject, QObject, QPoint, QRect,
+    QSize, QTime, QUrl, Qt)
+from PySide6.QtGui import (QBrush, QColor, QConicalGradient, QCursor,
+    QFont, QFontDatabase, QGradient, QIcon,
+    QImage, QKeySequence, QLinearGradient, QPainter,
+    QPalette, QPixmap, QRadialGradient, QTransform)
+from PySide6.QtWidgets import (QApplication, QCheckBox, QComboBox, QDialog,
+    QHBoxLayout, QLabel, QLineEdit, QListWidget,
+    QListWidgetItem, QPushButton, QSizePolicy, QSpacerItem,
+    QTabWidget, QVBoxLayout, QWidget)
 
 class Ui_Dialog(object):
     def setupUi(self, Dialog):
-        Dialog.setObjectName("Dialog")
-        Dialog.resize(638, 636)
-        self.verticalLayout_5 = QtWidgets.QVBoxLayout(Dialog)
-        self.verticalLayout_5.setObjectName("verticalLayout_5")
-        self.verticalLayout_4 = QtWidgets.QVBoxLayout()
-        self.verticalLayout_4.setObjectName("verticalLayout_4")
-        self.horizontalLayout_5 = QtWidgets.QHBoxLayout()
-        self.horizontalLayout_5.setObjectName("horizontalLayout_5")
-        self.verticalLayout_2 = QtWidgets.QVBoxLayout()
-        self.verticalLayout_2.setObjectName("verticalLayout_2")
-        self.lbModifier = QtWidgets.QLabel(Dialog)
-        self.lbModifier.setObjectName("lbModifier")
+        if not Dialog.objectName():
+            Dialog.setObjectName(u"Dialog")
+        Dialog.resize(1088, 654)
+        self.verticalLayout_5 = QVBoxLayout(Dialog)
+        self.verticalLayout_5.setObjectName(u"verticalLayout_5")
+        self.cb_ask_at_stop = QCheckBox(Dialog)
+        self.cb_ask_at_stop.setObjectName(u"cb_ask_at_stop")
+
+        self.verticalLayout_5.addWidget(self.cb_ask_at_stop)
+
+        self.verticalLayout_4 = QVBoxLayout()
+        self.verticalLayout_4.setObjectName(u"verticalLayout_4")
+        self.horizontalLayout_5 = QHBoxLayout()
+        self.horizontalLayout_5.setObjectName(u"horizontalLayout_5")
+        self.verticalLayout_2 = QVBoxLayout()
+        self.verticalLayout_2.setObjectName(u"verticalLayout_2")
+        self.lbModifier = QLabel(Dialog)
+        self.lbModifier.setObjectName(u"lbModifier")
+
         self.verticalLayout_2.addWidget(self.lbModifier)
-        self.leModifier = QtWidgets.QLineEdit(Dialog)
-        self.leModifier.setObjectName("leModifier")
+
+        self.leModifier = QLineEdit(Dialog)
+        self.leModifier.setObjectName(u"leModifier")
+
         self.verticalLayout_2.addWidget(self.leModifier)
-        self.lbCode = QtWidgets.QLabel(Dialog)
-        self.lbCode.setObjectName("lbCode")
+
+        self.lbCode = QLabel(Dialog)
+        self.lbCode.setObjectName(u"lbCode")
+
         self.verticalLayout_2.addWidget(self.lbCode)
-        self.leCode = QtWidgets.QLineEdit(Dialog)
-        self.leCode.setObjectName("leCode")
+
+        self.leCode = QLineEdit(Dialog)
+        self.leCode.setObjectName(u"leCode")
+
         self.verticalLayout_2.addWidget(self.leCode)
-        self.lbCodeHelp = QtWidgets.QLabel(Dialog)
+
+        self.lbCodeHelp = QLabel(Dialog)
+        self.lbCodeHelp.setObjectName(u"lbCodeHelp")
         self.lbCodeHelp.setWordWrap(True)
-        self.lbCodeHelp.setObjectName("lbCodeHelp")
+
         self.verticalLayout_2.addWidget(self.lbCodeHelp)
-        spacerItem = QtWidgets.QSpacerItem(20, 40, QtWidgets.QSizePolicy.Minimum, QtWidgets.QSizePolicy.Expanding)
-        self.verticalLayout_2.addItem(spacerItem)
+
+        self.verticalSpacer = QSpacerItem(20, 40, QSizePolicy.Policy.Minimum, QSizePolicy.Policy.Expanding)
+
+        self.verticalLayout_2.addItem(self.verticalSpacer)
+
+
         self.horizontalLayout_5.addLayout(self.verticalLayout_2)
-        self.verticalLayout_3 = QtWidgets.QVBoxLayout()
-        self.verticalLayout_3.setObjectName("verticalLayout_3")
-        self.pbAddModifier = QtWidgets.QPushButton(Dialog)
-        self.pbAddModifier.setText("")
-        self.pbAddModifier.setObjectName("pbAddModifier")
+
+        self.verticalLayout_3 = QVBoxLayout()
+        self.verticalLayout_3.setObjectName(u"verticalLayout_3")
+        self.pbAddModifier = QPushButton(Dialog)
+        self.pbAddModifier.setObjectName(u"pbAddModifier")
+
         self.verticalLayout_3.addWidget(self.pbAddModifier)
-        self.pbModifyModifier = QtWidgets.QPushButton(Dialog)
-        self.pbModifyModifier.setText("")
-        self.pbModifyModifier.setObjectName("pbModifyModifier")
+
+        self.pbModifyModifier = QPushButton(Dialog)
+        self.pbModifyModifier.setObjectName(u"pbModifyModifier")
+
         self.verticalLayout_3.addWidget(self.pbModifyModifier)
-        spacerItem1 = QtWidgets.QSpacerItem(20, 40, QtWidgets.QSizePolicy.Minimum, QtWidgets.QSizePolicy.Expanding)
-        self.verticalLayout_3.addItem(spacerItem1)
+
+        self.verticalSpacer_2 = QSpacerItem(20, 40, QSizePolicy.Policy.Minimum, QSizePolicy.Policy.Expanding)
+
+        self.verticalLayout_3.addItem(self.verticalSpacer_2)
+
+
         self.horizontalLayout_5.addLayout(self.verticalLayout_3)
-        self.verticalLayout = QtWidgets.QVBoxLayout()
-        self.verticalLayout.setObjectName("verticalLayout")
-        self.tabWidgetModifiersSets = QtWidgets.QTabWidget(Dialog)
-        self.tabWidgetModifiersSets.setMaximumSize(QtCore.QSize(16777215, 30))
-        self.tabWidgetModifiersSets.setTabPosition(QtWidgets.QTabWidget.North)
-        self.tabWidgetModifiersSets.setTabShape(QtWidgets.QTabWidget.Rounded)
-        self.tabWidgetModifiersSets.setElideMode(QtCore.Qt.ElideNone)
+
+        self.verticalLayout = QVBoxLayout()
+        self.verticalLayout.setObjectName(u"verticalLayout")
+        self.tabWidgetModifiersSets = QTabWidget(Dialog)
+        self.tabWidgetModifiersSets.setObjectName(u"tabWidgetModifiersSets")
+        self.tabWidgetModifiersSets.setMaximumSize(QSize(16777215, 30))
+        self.tabWidgetModifiersSets.setTabPosition(QTabWidget.TabPosition.North)
+        self.tabWidgetModifiersSets.setTabShape(QTabWidget.TabShape.Rounded)
+        self.tabWidgetModifiersSets.setElideMode(Qt.TextElideMode.ElideNone)
         self.tabWidgetModifiersSets.setDocumentMode(True)
-        self.tabWidgetModifiersSets.setObjectName("tabWidgetModifiersSets")
+
         self.verticalLayout.addWidget(self.tabWidgetModifiersSets)
-        self.lb_name = QtWidgets.QLabel(Dialog)
-        self.lb_name.setObjectName("lb_name")
+
+        self.lb_name = QLabel(Dialog)
+        self.lb_name.setObjectName(u"lb_name")
+
         self.verticalLayout.addWidget(self.lb_name)
-        self.le_name = QtWidgets.QLineEdit(Dialog)
-        self.le_name.setObjectName("le_name")
+
+        self.le_name = QLineEdit(Dialog)
+        self.le_name.setObjectName(u"le_name")
+
         self.verticalLayout.addWidget(self.le_name)
-        self.lb_description = QtWidgets.QLabel(Dialog)
-        self.lb_description.setObjectName("lb_description")
+
+        self.lb_description = QLabel(Dialog)
+        self.lb_description.setObjectName(u"lb_description")
+
         self.verticalLayout.addWidget(self.lb_description)
-        self.le_description = QtWidgets.QLineEdit(Dialog)
-        self.le_description.setObjectName("le_description")
+
+        self.le_description = QLineEdit(Dialog)
+        self.le_description.setObjectName(u"le_description")
+
         self.verticalLayout.addWidget(self.le_description)
-        self.lbType = QtWidgets.QLabel(Dialog)
-        self.lbType.setObjectName("lbType")
+
+        self.lbType = QLabel(Dialog)
+        self.lbType.setObjectName(u"lbType")
+
         self.verticalLayout.addWidget(self.lbType)
-        self.cbType = QtWidgets.QComboBox(Dialog)
-        self.cbType.setObjectName("cbType")
+
+        self.cbType = QComboBox(Dialog)
         self.cbType.addItem("")
         self.cbType.addItem("")
         self.cbType.addItem("")
         self.cbType.addItem("")
+        self.cbType.setObjectName(u"cbType")
+
         self.verticalLayout.addWidget(self.cbType)
-        self.lbValues = QtWidgets.QLabel(Dialog)
-        self.lbValues.setObjectName("lbValues")
+
+        self.lbValues = QLabel(Dialog)
+        self.lbValues.setObjectName(u"lbValues")
+
         self.verticalLayout.addWidget(self.lbValues)
-        self.lwModifiers = QtWidgets.QListWidget(Dialog)
-        self.lwModifiers.setObjectName("lwModifiers")
+
+        self.lwModifiers = QListWidget(Dialog)
+        self.lwModifiers.setObjectName(u"lwModifiers")
+
         self.verticalLayout.addWidget(self.lwModifiers)
-        self.horizontalLayout = QtWidgets.QHBoxLayout()
-        self.horizontalLayout.setObjectName("horizontalLayout")
-        self.pbMoveUp = QtWidgets.QPushButton(Dialog)
-        self.pbMoveUp.setObjectName("pbMoveUp")
+
+        self.horizontalLayout = QHBoxLayout()
+        self.horizontalLayout.setObjectName(u"horizontalLayout")
+        self.pbMoveUp = QPushButton(Dialog)
+        self.pbMoveUp.setObjectName(u"pbMoveUp")
+
         self.horizontalLayout.addWidget(self.pbMoveUp)
-        self.pbMoveDown = QtWidgets.QPushButton(Dialog)
-        self.pbMoveDown.setObjectName("pbMoveDown")
+
+        self.pbMoveDown = QPushButton(Dialog)
+        self.pbMoveDown.setObjectName(u"pbMoveDown")
+
         self.horizontalLayout.addWidget(self.pbMoveDown)
+
+        self.pb_sort_modifiers = QPushButton(Dialog)
+        self.pb_sort_modifiers.setObjectName(u"pb_sort_modifiers")
+
+        self.horizontalLayout.addWidget(self.pb_sort_modifiers)
+
+        self.pbRemoveModifier = QPushButton(Dialog)
+        self.pbRemoveModifier.setObjectName(u"pbRemoveModifier")
+
+        self.horizontalLayout.addWidget(self.pbRemoveModifier)
+
+
         self.verticalLayout.addLayout(self.horizontalLayout)
-        self.pbRemoveModifier = QtWidgets.QPushButton(Dialog)
-        self.pbRemoveModifier.setObjectName("pbRemoveModifier")
-        self.verticalLayout.addWidget(self.pbRemoveModifier)
-        self.pb_sort_modifiers = QtWidgets.QPushButton(Dialog)
-        self.pb_sort_modifiers.setObjectName("pb_sort_modifiers")
-        self.verticalLayout.addWidget(self.pb_sort_modifiers)
-        self.horizontalLayout_3 = QtWidgets.QHBoxLayout()
-        self.horizontalLayout_3.setObjectName("horizontalLayout_3")
-        self.pbAddSet = QtWidgets.QPushButton(Dialog)
-        self.pbAddSet.setObjectName("pbAddSet")
+
+        self.horizontalLayout_3 = QHBoxLayout()
+        self.horizontalLayout_3.setObjectName(u"horizontalLayout_3")
+        self.pbAddSet = QPushButton(Dialog)
+        self.pbAddSet.setObjectName(u"pbAddSet")
+
         self.horizontalLayout_3.addWidget(self.pbAddSet)
-        self.pbRemoveSet = QtWidgets.QPushButton(Dialog)
-        self.pbRemoveSet.setObjectName("pbRemoveSet")
+
+        self.pbMoveSetLeft = QPushButton(Dialog)
+        self.pbMoveSetLeft.setObjectName(u"pbMoveSetLeft")
+
+        self.horizontalLayout_3.addWidget(self.pbMoveSetLeft)
+
+        self.pbMoveSetRight = QPushButton(Dialog)
+        self.pbMoveSetRight.setObjectName(u"pbMoveSetRight")
+
+        self.horizontalLayout_3.addWidget(self.pbMoveSetRight)
+
+        self.pbRemoveSet = QPushButton(Dialog)
+        self.pbRemoveSet.setObjectName(u"pbRemoveSet")
+
         self.horizontalLayout_3.addWidget(self.pbRemoveSet)
+
+
         self.verticalLayout.addLayout(self.horizontalLayout_3)
-        self.horizontalLayout_4 = QtWidgets.QHBoxLayout()
-        self.horizontalLayout_4.setObjectName("horizontalLayout_4")
-        self.pbMoveSetLeft = QtWidgets.QPushButton(Dialog)
-        self.pbMoveSetLeft.setObjectName("pbMoveSetLeft")
-        self.horizontalLayout_4.addWidget(self.pbMoveSetLeft)
-        self.pbMoveSetRight = QtWidgets.QPushButton(Dialog)
-        self.pbMoveSetRight.setObjectName("pbMoveSetRight")
-        self.horizontalLayout_4.addWidget(self.pbMoveSetRight)
+
+        self.horizontalLayout_4 = QHBoxLayout()
+        self.horizontalLayout_4.setObjectName(u"horizontalLayout_4")
+
         self.verticalLayout.addLayout(self.horizontalLayout_4)
-        self.pb_add_subjects = QtWidgets.QPushButton(Dialog)
-        self.pb_add_subjects.setObjectName("pb_add_subjects")
+
+        self.pb_add_subjects = QPushButton(Dialog)
+        self.pb_add_subjects.setObjectName(u"pb_add_subjects")
+
         self.verticalLayout.addWidget(self.pb_add_subjects)
-        self.pb_load_file = QtWidgets.QPushButton(Dialog)
-        self.pb_load_file.setObjectName("pb_load_file")
+
+        self.pb_load_file = QPushButton(Dialog)
+        self.pb_load_file.setObjectName(u"pb_load_file")
+
         self.verticalLayout.addWidget(self.pb_load_file)
-        spacerItem2 = QtWidgets.QSpacerItem(20, 40, QtWidgets.QSizePolicy.Minimum, QtWidgets.QSizePolicy.Expanding)
-        self.verticalLayout.addItem(spacerItem2)
+
+        self.verticalSpacer_3 = QSpacerItem(20, 40, QSizePolicy.Policy.Minimum, QSizePolicy.Policy.Expanding)
+
+        self.verticalLayout.addItem(self.verticalSpacer_3)
+
+
         self.horizontalLayout_5.addLayout(self.verticalLayout)
+
+
         self.verticalLayout_4.addLayout(self.horizontalLayout_5)
-        self.horizontalLayout_2 = QtWidgets.QHBoxLayout()
-        self.horizontalLayout_2.setObjectName("horizontalLayout_2")
-        spacerItem3 = QtWidgets.QSpacerItem(40, 20, QtWidgets.QSizePolicy.Expanding, QtWidgets.QSizePolicy.Minimum)
-        self.horizontalLayout_2.addItem(spacerItem3)
-        self.pbCancel = QtWidgets.QPushButton(Dialog)
-        self.pbCancel.setObjectName("pbCancel")
+
+        self.horizontalLayout_2 = QHBoxLayout()
+        self.horizontalLayout_2.setObjectName(u"horizontalLayout_2")
+        self.horizontalSpacer = QSpacerItem(40, 20, QSizePolicy.Policy.Expanding, QSizePolicy.Policy.Minimum)
+
+        self.horizontalLayout_2.addItem(self.horizontalSpacer)
+
+        self.pbCancel = QPushButton(Dialog)
+        self.pbCancel.setObjectName(u"pbCancel")
+
         self.horizontalLayout_2.addWidget(self.pbCancel)
-        self.pbOK = QtWidgets.QPushButton(Dialog)
-        self.pbOK.setObjectName("pbOK")
+
+        self.pbOK = QPushButton(Dialog)
+        self.pbOK.setObjectName(u"pbOK")
+
         self.horizontalLayout_2.addWidget(self.pbOK)
+
+
         self.verticalLayout_4.addLayout(self.horizontalLayout_2)
+
+
         self.verticalLayout_5.addLayout(self.verticalLayout_4)
 
+
         self.retranslateUi(Dialog)
+
         self.tabWidgetModifiersSets.setCurrentIndex(-1)
-        QtCore.QMetaObject.connectSlotsByName(Dialog)
+
+
+        QMetaObject.connectSlotsByName(Dialog)
+    # setupUi
 
     def retranslateUi(self, Dialog):
-        _translate = QtCore.QCoreApplication.translate
-        Dialog.setWindowTitle(_translate("Dialog", "Set modifiers"))
-        self.lbModifier.setText(_translate("Dialog", "Modifier"))
-        self.lbCode.setText(_translate("Dialog", "Key code"))
-        self.lbCodeHelp.setText(_translate("Dialog", "Key code is case sensitive. Type one character or a function key (F1, F2... F12)"))
-        self.lb_name.setText(_translate("Dialog", "Set name"))
-        self.lb_description.setText(_translate("Dialog", "Description"))
-        self.lbType.setText(_translate("Dialog", "Modifier type"))
-        self.cbType.setItemText(0, _translate("Dialog", "Single selection"))
-        self.cbType.setItemText(1, _translate("Dialog", "Multiple selection"))
-        self.cbType.setItemText(2, _translate("Dialog", "Numeric"))
-        self.cbType.setItemText(3, _translate("Dialog", "Value from external data file"))
-        self.lbValues.setText(_translate("Dialog", "Values"))
-        self.pbMoveUp.setText(_translate("Dialog", "Move modifier up"))
-        self.pbMoveDown.setText(_translate("Dialog", "Move modifier down"))
-        self.pbRemoveModifier.setText(_translate("Dialog", "Remove modifier"))
-        self.pb_sort_modifiers.setText(_translate("Dialog", "Sort modifiers"))
-        self.pbAddSet.setText(_translate("Dialog", "Add set of modifiers"))
-        self.pbRemoveSet.setText(_translate("Dialog", "Remove set of modifiers"))
-        self.pbMoveSetLeft.setText(_translate("Dialog", "Move set left"))
-        self.pbMoveSetRight.setText(_translate("Dialog", "Move set right"))
-        self.pb_add_subjects.setText(_translate("Dialog", "Add subjects as modifiers"))
-        self.pb_load_file.setText(_translate("Dialog", "Load modifiers from file"))
-        self.pbCancel.setText(_translate("Dialog", "Cancel"))
-        self.pbOK.setText(_translate("Dialog", "OK"))
+        Dialog.setWindowTitle(QCoreApplication.translate("Dialog", u"Set modifiers", None))
+        self.cb_ask_at_stop.setText(QCoreApplication.translate("Dialog", u"Ask for modifier(s) when behavior stops", None))
+        self.lbModifier.setText(QCoreApplication.translate("Dialog", u"Modifier", None))
+        self.lbCode.setText(QCoreApplication.translate("Dialog", u"Key code", None))
+        self.lbCodeHelp.setText(QCoreApplication.translate("Dialog", u"Key code is case sensitive. Type one character or a function key (F1, F2... F12)", None))
+        self.pbAddModifier.setText(QCoreApplication.translate("Dialog", u"->", None))
+        self.pbModifyModifier.setText(QCoreApplication.translate("Dialog", u"<-", None))
+        self.lb_name.setText(QCoreApplication.translate("Dialog", u"Set name", None))
+        self.lb_description.setText(QCoreApplication.translate("Dialog", u"Description", None))
+        self.lbType.setText(QCoreApplication.translate("Dialog", u"Modifier type", None))
+        self.cbType.setItemText(0, QCoreApplication.translate("Dialog", u"Single selection", None))
+        self.cbType.setItemText(1, QCoreApplication.translate("Dialog", u"Multiple selection", None))
+        self.cbType.setItemText(2, QCoreApplication.translate("Dialog", u"Numeric", None))
+        self.cbType.setItemText(3, QCoreApplication.translate("Dialog", u"Value from external data file", None))
+
+        self.lbValues.setText(QCoreApplication.translate("Dialog", u"Values", None))
+        self.pbMoveUp.setText(QCoreApplication.translate("Dialog", u"Move modifier up", None))
+        self.pbMoveDown.setText(QCoreApplication.translate("Dialog", u"Move modifier down", None))
+        self.pb_sort_modifiers.setText(QCoreApplication.translate("Dialog", u"Sort modifiers", None))
+        self.pbRemoveModifier.setText(QCoreApplication.translate("Dialog", u"Remove modifier", None))
+        self.pbAddSet.setText(QCoreApplication.translate("Dialog", u"Add set of modifiers", None))
+        self.pbMoveSetLeft.setText(QCoreApplication.translate("Dialog", u"Move set left", None))
+        self.pbMoveSetRight.setText(QCoreApplication.translate("Dialog", u"Move set right", None))
+        self.pbRemoveSet.setText(QCoreApplication.translate("Dialog", u"Remove set of modifiers", None))
+        self.pb_add_subjects.setText(QCoreApplication.translate("Dialog", u"Add subjects as modifiers", None))
+        self.pb_load_file.setText(QCoreApplication.translate("Dialog", u"Load modifiers from file", None))
+        self.pbCancel.setText(QCoreApplication.translate("Dialog", u"Cancel", None))
+        self.pbOK.setText(QCoreApplication.translate("Dialog", u"OK", None))
+    # retranslateUi
+

boris/advanced_event_filtering.py

@@ -1,7 +1,7 @@
 """
 BORIS
 Behavioral Observation Research Interactive Software
-Copyright 2012-2023 Olivier Friard
+Copyright 2012-2025 Olivier Friard
 
   This program is free software; you can redistribute it and/or modify
   it under the terms of the GNU General Public License as published by
@@ -19,16 +19,15 @@ Copyright 2012-2023 Olivier Friard
   MA 02110-1301, USA.
 """
 
-from decimal import Decimal as dec
 import pathlib
 import re
 import statistics
 import sys
 
 import tablib
-from PyQt5.QtCore import Qt
-from PyQt5.QtGui import QIcon
-from PyQt5.QtWidgets import (
+from PySide6.QtCore import Qt
+from PySide6.QtGui import QIcon
+from PySide6.QtWidgets import (
     QDialog,
     QFileDialog,
     QHBoxLayout,
@@ -156,7 +155,7 @@ class Advanced_event_filtering_dialog(QDialog):
         hbox.addItem(QSpacerItem(241, 20, QSizePolicy.Expanding, QSizePolicy.Minimum))
         self.pb_save = QPushButton("Save results", clicked=self.save_results)
         hbox.addWidget(self.pb_save)
-        self.pb_close = QPushButton("Close", clicked=self.close)
+        self.pb_close = QPushButton(cfg.CLOSE, clicked=self.close)
         hbox.addWidget(self.pb_close)
         vbox.addLayout(hbox)
 
@@ -190,7 +189,6 @@ class Advanced_event_filtering_dialog(QDialog):
         add selected logic operaton to lineedit
         """
         if self.lw3.currentItem():
-
             text = ""
             if self.lw3.currentItem().text() == "AND":
                 text = " & "
@@ -208,7 +206,7 @@ class Advanced_event_filtering_dialog(QDialog):
         if not self.logic.text():
             return
         if self.logic.text().count('"') % 2:
-            QMessageBox.warning(self, cfg.programName, f'Wrong number of double quotes (")')
+            QMessageBox.warning(self, cfg.programName, 'Wrong number of double quotes (")')
             return
 
         sb_list = re.findall('"([^"]*)"', self.logic.text())
@@ -237,15 +235,13 @@ class Advanced_event_filtering_dialog(QDialog):
         self.tw.clear()
 
         if flag_error or self.rb_details.isChecked():
-
-            self.lb_results.setText(f"Results ({len(self.out)} event{'s'*(len(self.out) > 1)})")
+            self.lb_results.setText(f"Results ({len(self.out)} event{'s' * (len(self.out) > 1)})")
 
             self.tw.setRowCount(len(self.out))
             self.tw.setColumnCount(len(self.details_header))  # obs_id, comment, start, stop, duration
             self.tw.setHorizontalHeaderLabels(self.details_header)
 
         if not flag_error and self.rb_summary.isChecked():
-
             summary = {}
             for row in self.out:
                 obs_id, _, start, stop, duration = row
@@ -255,7 +251,6 @@ class Advanced_event_filtering_dialog(QDialog):
 
             self.out = []
             for obs_id in summary:
-
                 self.out.append(
                     [
                         obs_id,
@@ -266,7 +261,7 @@ class Advanced_event_filtering_dialog(QDialog):
                     ]
                 )
 
-            self.lb_results.setText(f"Results ({len(summary)} observation{'s'*(len(summary) > 1)})")
+            self.lb_results.setText(f"Results ({len(summary)} observation{'s' * (len(summary) > 1)})")
             self.tw.setRowCount(len(summary))
             self.tw.setColumnCount(len(self.summary_header))  # obs_id, mean, stdev
             self.tw.setHorizontalHeaderLabels(self.summary_header)
@@ -303,9 +298,7 @@ class Advanced_event_filtering_dialog(QDialog):
             # check if file with new extension already exists
             if pathlib.Path(file_name).is_file():
                 if (
-                    dialog.MessageDialog(
-                        cfg.programName, f"The file {file_name} already exists.", [cfg.CANCEL, cfg.OVERWRITE]
-                    )
+                    dialog.MessageDialog(cfg.programName, f"The file {file_name} already exists.", [cfg.CANCEL, cfg.OVERWRITE])
                     == cfg.CANCEL
                 ):
                     return
@@ -357,22 +350,27 @@ def event_filtering(self):
         )
         return
 
-    max_media_duration_all_obs, _ = observation_operations.media_duration(
-        self.pj[cfg.OBSERVATIONS], selected_observations
-    )
+    max_media_duration_all_obs, _ = observation_operations.media_duration(self.pj[cfg.OBSERVATIONS], selected_observations)
+
+    start_interval, end_interval = observation_operations.time_intervals_range(self.pj[cfg.OBSERVATIONS], selected_observations)
 
     parameters = select_subj_behav.choose_obs_subj_behav_category(
         self,
         selected_observations,
         start_coding=start_coding,
         end_coding=end_coding,
+        # start_interval=start_interval,
+        # end_interval=end_interval,
+        start_interval=None,
+        end_interval=None,
         maxTime=max_media_duration_all_obs,
-        flagShowIncludeModifiers=False,
-        flagShowExcludeBehaviorsWoEvents=False,
+        show_include_modifiers=False,
+        show_exclude_non_coded_behaviors=False,
         by_category=False,
         n_observations=len(selected_observations),
     )
-    if parameters == {}:
+
+    if not parameters:
         return
 
     if not parameters[cfg.SELECTED_SUBJECTS] or not parameters[cfg.SELECTED_BEHAVIORS]:
@@ -389,7 +387,7 @@ def event_filtering(self):
         cursor.execute("SELECT MIN(start), MAX(stop) FROM aggregated_events")
         min_time, max_time = cursor.fetchone()
 
-    if parameters[cfg.TIME_INTERVAL] == cfg.TIME_ARBITRARY_INTERVAL:
+    if parameters[cfg.TIME_INTERVAL] in (cfg.TIME_ARBITRARY_INTERVAL, cfg.TIME_OBS_INTERVAL):
         min_time = float(parameters[cfg.START_TIME])
         max_time = float(parameters[cfg.END_TIME])
 
@@ -438,7 +436,7 @@ def event_filtering(self):
     for row in cursor.fetchall():
         obs, subj, behav, start, stop = row
         if obs not in events:
-            events[obs]: dict = {}
+            events[obs] = {}
 
         # use function in base at event (state or point)
         interval_func = icc if start == stop else ico
@@ -452,10 +450,6 @@ def event_filtering(self):
 
     w = Advanced_event_filtering_dialog(events)
     w.lb_time_interval.setText(
-        (
-            f"Time interval: "
-            f"{util.dynamic_time_format(min_time, cfg.DYNAMIC_TIME_CUTOFF_DEFAULT, self.timeFormat)} - "
-            f"{util.dynamic_time_format(max_time, cfg.DYNAMIC_TIME_CUTOFF_DEFAULT, self.timeFormat)}"
-        )
+        (f"Time interval: {util.smart_time_format(min_time, self.timeFormat)} - {util.smart_time_format(max_time, self.timeFormat)}")
     )
     w.exec_()

boris/analysis_plugins/_latency.py

@@ -0,0 +1,59 @@
+"""
+BORIS plugin
+
+number of occurences of behaviors
+"""
+
+import pandas as pd
+
+__version__ = "0.0.1"
+__version_date__ = "2025-04-10"
+__plugin_name__ = "Behavior latencyxxx"
+__author__ = "Olivier Friard - University of Torino - Italy"
+
+
+import itertools
+
+
+def run(df: pd.DataFrame):
+    """
+    Latency of a behavior after another.
+    """
+
+    df["start_time"] = pd.to_datetime(df["Start (s)"])
+    df["end_time"] = pd.to_datetime(df["Stop (s)"])
+
+    latency_by_subject: dict = {}
+
+    for subject, group in df.groupby("subject"):
+        behaviors = group["behavior"].tolist()
+        # combinations = []
+        # Utiliser itertools pour créer des combinaisons 2 à 2 des comportements
+        for comb in itertools.combinations(behaviors, 2):
+            # combinations.append(comb)
+
+            last_A_end_time = None
+
+            # Liste pour stocker les latences de chaque sujet
+            subject_latency = []
+
+            for index, row in group.iterrows():
+                if row["behavior"] == comb[0]:
+                    # Si on rencontre un comportement A, on réinitialise le temps de fin du comportement A
+                    last_A_end_time = row["end_time"]
+                    subject_latency.append(None)  # Pas de latence pour A
+                elif row["behavior"] == comb[1] and last_A_end_time is not None:
+                    # Si on rencontre un comportement B et qu'on a déjà vu un A avant
+                    latency_time = row["start_time"] - last_A_end_time
+                    subject_latency.append(latency_time)
+                else:
+                    # Si on rencontre un B mais sans A avant
+                    subject_latency.append(None)
+
+            # Ajout des latences calculées au DataFrame
+            df.loc[group.index, f"latency {comb[1]} after {comb[0]}"] = subject_latency
+
+            # Calcul de la latence totale ou moyenne par sujet
+            latency_by_subject[(subject, comb)] = df.groupby("subject")["latency"].agg(["sum", "mean"])
+
+    return str(latency_by_subject)