boris-behav-obs 8.12__py3-none-any.whl → 9.7.6__py3-none-any.whl

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Files changed (128) hide show
  1. boris/__init__.py +1 -1
  2. boris/__main__.py +1 -1
  3. boris/about.py +28 -39
  4. boris/add_modifier.py +122 -109
  5. boris/add_modifier_ui.py +239 -135
  6. boris/advanced_event_filtering.py +81 -45
  7. boris/analysis_plugins/__init__.py +0 -0
  8. boris/analysis_plugins/_latency.py +59 -0
  9. boris/analysis_plugins/irr_cohen_kappa.py +109 -0
  10. boris/analysis_plugins/irr_cohen_kappa_with_modifiers.py +112 -0
  11. boris/analysis_plugins/irr_weighted_cohen_kappa.py +157 -0
  12. boris/analysis_plugins/irr_weighted_cohen_kappa_with_modifiers.py +162 -0
  13. boris/analysis_plugins/list_of_dataframe_columns.py +22 -0
  14. boris/analysis_plugins/number_of_occurences.py +22 -0
  15. boris/analysis_plugins/number_of_occurences_by_independent_variable.py +54 -0
  16. boris/analysis_plugins/time_budget.py +61 -0
  17. boris/behav_coding_map_creator.py +228 -229
  18. boris/behavior_binary_table.py +33 -50
  19. boris/behaviors_coding_map.py +17 -18
  20. boris/boris_cli.py +6 -25
  21. boris/cmd_arguments.py +12 -1
  22. boris/coding_pad.py +42 -49
  23. boris/config.py +141 -65
  24. boris/config_file.py +58 -67
  25. boris/connections.py +107 -61
  26. boris/converters.py +13 -37
  27. boris/converters_ui.py +187 -110
  28. boris/cooccurence.py +250 -0
  29. boris/core.py +2373 -1786
  30. boris/core_qrc.py +15895 -10743
  31. boris/core_ui.py +943 -798
  32. boris/db_functions.py +17 -42
  33. boris/dev.py +109 -8
  34. boris/dialog.py +482 -236
  35. boris/duration_widget.py +9 -14
  36. boris/edit_event.py +61 -31
  37. boris/edit_event_ui.py +208 -97
  38. boris/event_operations.py +408 -293
  39. boris/events_cursor.py +25 -17
  40. boris/events_snapshots.py +36 -82
  41. boris/exclusion_matrix.py +4 -9
  42. boris/export_events.py +184 -223
  43. boris/export_observation.py +74 -100
  44. boris/external_processes.py +123 -98
  45. boris/geometric_measurement.py +644 -290
  46. boris/gui_utilities.py +91 -14
  47. boris/image_overlay.py +4 -4
  48. boris/import_observations.py +190 -98
  49. boris/ipc_mpv.py +325 -0
  50. boris/irr.py +20 -57
  51. boris/latency.py +31 -24
  52. boris/measurement_widget.py +14 -18
  53. boris/media_file.py +17 -19
  54. boris/menu_options.py +17 -6
  55. boris/modifier_coding_map_creator.py +1013 -0
  56. boris/modifiers_coding_map.py +7 -9
  57. boris/mpv.py +1 -0
  58. boris/mpv2.py +732 -705
  59. boris/observation.py +533 -221
  60. boris/observation_operations.py +1025 -390
  61. boris/observation_ui.py +572 -362
  62. boris/observations_list.py +71 -53
  63. boris/otx_parser.py +74 -68
  64. boris/param_panel.py +31 -16
  65. boris/param_panel_ui.py +254 -138
  66. boris/player_dock_widget.py +90 -60
  67. boris/plot_data_module.py +25 -33
  68. boris/plot_events.py +127 -90
  69. boris/plot_events_rt.py +17 -31
  70. boris/plot_spectrogram_rt.py +95 -30
  71. boris/plot_waveform_rt.py +32 -21
  72. boris/plugins.py +431 -0
  73. boris/portion/__init__.py +18 -8
  74. boris/portion/const.py +35 -18
  75. boris/portion/dict.py +5 -5
  76. boris/portion/func.py +2 -2
  77. boris/portion/interval.py +21 -41
  78. boris/portion/io.py +41 -32
  79. boris/preferences.py +306 -83
  80. boris/preferences_ui.py +684 -227
  81. boris/project.py +448 -293
  82. boris/project_functions.py +671 -238
  83. boris/project_import_export.py +213 -222
  84. boris/project_ui.py +674 -438
  85. boris/qrc_boris.py +6 -3
  86. boris/qrc_boris5.py +6 -3
  87. boris/select_modifiers.py +74 -48
  88. boris/select_observations.py +20 -198
  89. boris/select_subj_behav.py +67 -39
  90. boris/state_events.py +52 -35
  91. boris/subjects_pad.py +6 -9
  92. boris/synthetic_time_budget.py +45 -28
  93. boris/time_budget_functions.py +171 -171
  94. boris/time_budget_widget.py +84 -114
  95. boris/transitions.py +41 -47
  96. boris/utilities.py +627 -236
  97. boris/version.py +3 -3
  98. boris/video_equalizer.py +16 -14
  99. boris/video_equalizer_ui.py +199 -130
  100. boris/video_operations.py +95 -29
  101. boris/view_df.py +104 -0
  102. boris/view_df_ui.py +75 -0
  103. boris/write_event.py +538 -0
  104. boris_behav_obs-9.7.6.dist-info/METADATA +139 -0
  105. boris_behav_obs-9.7.6.dist-info/RECORD +109 -0
  106. {boris_behav_obs-8.12.dist-info → boris_behav_obs-9.7.6.dist-info}/WHEEL +1 -1
  107. boris_behav_obs-9.7.6.dist-info/entry_points.txt +2 -0
  108. boris/README.TXT +0 -22
  109. boris/add_modifier.ui +0 -323
  110. boris/converters.ui +0 -289
  111. boris/core.qrc +0 -36
  112. boris/core.ui +0 -1556
  113. boris/edit_event.ui +0 -233
  114. boris/icons/logo_eye.ico +0 -0
  115. boris/map_creator.py +0 -850
  116. boris/observation.ui +0 -814
  117. boris/param_panel.ui +0 -379
  118. boris/preferences.ui +0 -537
  119. boris/project.ui +0 -1069
  120. boris/project_server.py +0 -236
  121. boris/vlc.py +0 -10343
  122. boris/vlc_local.py +0 -90
  123. boris_behav_obs-8.12.dist-info/LICENSE.TXT +0 -674
  124. boris_behav_obs-8.12.dist-info/METADATA +0 -128
  125. boris_behav_obs-8.12.dist-info/RECORD +0 -108
  126. boris_behav_obs-8.12.dist-info/entry_points.txt +0 -3
  127. {boris → boris_behav_obs-9.7.6.dist-info/licenses}/LICENSE.TXT +0 -0
  128. {boris_behav_obs-8.12.dist-info → boris_behav_obs-9.7.6.dist-info}/top_level.txt +0 -0
boris/preferences.ui DELETED
@@ -1,537 +0,0 @@
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- <?xml version="1.0" encoding="UTF-8"?>
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- <ui version="4.0">
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- <class>prefDialog</class>
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- <widget class="QDialog" name="prefDialog">
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- <property name="windowModality">
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- <enum>Qt::WindowModal</enum>
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- </property>
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- <property name="geometry">
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- <rect>
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- <x>0</x>
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- <y>0</y>
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- <width>719</width>
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- <height>554</height>
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- </rect>
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- </property>
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- <property name="windowTitle">
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- <string>Preferences</string>
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- </property>
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- <layout class="QGridLayout" name="gridLayout">
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- <item row="0" column="0">
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- <layout class="QVBoxLayout" name="verticalLayout_2">
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- <item>
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- <widget class="QTabWidget" name="tabWidget">
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- <property name="enabled">
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- <bool>true</bool>
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- </property>
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- <property name="currentIndex">
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- <number>1</number>
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- </property>
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- <widget class="QWidget" name="tab">
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- <attribute name="title">
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- <string>Project</string>
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- </attribute>
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- <layout class="QVBoxLayout" name="verticalLayout_5">
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_14">
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- <item>
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- <widget class="QLabel" name="label">
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- <property name="text">
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- <string>Default project time format</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QComboBox" name="cbTimeFormat">
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- <item>
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- <property name="text">
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- <string>seconds</string>
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- </property>
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- </item>
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- <item>
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- <property name="text">
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- <string>hh:mm:ss.mss</string>
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- </property>
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- </item>
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- </widget>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_15">
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- <item>
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- <widget class="QLabel" name="label_6">
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- <property name="text">
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- <string>Auto-save project every (minutes)</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QSpinBox" name="sbAutomaticBackup">
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- <property name="minimum">
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- <number>-10000</number>
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- </property>
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- <property name="maximum">
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- <number>10000</number>
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- </property>
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- <property name="value">
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- <number>10</number>
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- </property>
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- </widget>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_13">
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- <item>
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- <widget class="QLabel" name="label_3">
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- <property name="text">
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- <string>Separator for behavioural strings (events export)</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QLineEdit" name="leSeparator">
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- <property name="text">
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- <string>|</string>
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- </property>
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- </widget>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <widget class="QCheckBox" name="cbCheckForNewVersion">
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- <property name="text">
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- <string>Check for new version and news</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_11">
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- <item>
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- <widget class="QLabel" name="lb_hwdec">
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- <property name="text">
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- <string>MPV player hardware video decoding</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QComboBox" name="cb_hwdec"/>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_9">
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- <item>
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- <widget class="QLabel" name="lb_project_file_indent">
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- <property name="text">
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- <string>Project file indentation type</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QComboBox" name="combo_project_file_indentation"/>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <spacer name="verticalSpacer_2">
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- <property name="orientation">
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- <enum>Qt::Vertical</enum>
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- </property>
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- <property name="sizeHint" stdset="0">
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- <size>
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- <width>20</width>
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- <height>40</height>
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- </size>
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- </property>
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- </spacer>
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- </item>
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- </layout>
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- </widget>
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- <widget class="QWidget" name="tab_results">
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- <attribute name="title">
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- <string>Observations</string>
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- </attribute>
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- <layout class="QVBoxLayout" name="verticalLayout">
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_4">
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- <item>
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- <widget class="QLabel" name="label_4">
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- <property name="text">
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- <string>Fast forward/backward value (seconds)</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QSpinBox" name="sbffSpeed">
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- <property name="minimum">
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- <number>0</number>
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- </property>
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- <property name="maximum">
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- <number>10000</number>
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- </property>
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- <property name="value">
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- <number>10</number>
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- </property>
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- </widget>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <widget class="QCheckBox" name="cb_adapt_fast_jump">
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- <property name="text">
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- <string>Adapt the fast forward/backward jump to playback speed</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_5">
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- <item>
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- <widget class="QLabel" name="label_5">
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- <property name="text">
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- <string>Playback speed step value</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QDoubleSpinBox" name="sbSpeedStep">
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- <property name="decimals">
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- <number>1</number>
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- </property>
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- <property name="minimum">
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- <double>0.100000000000000</double>
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- </property>
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- <property name="maximum">
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- <double>10.000000000000000</double>
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- </property>
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- <property name="singleStep">
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- <double>0.100000000000000</double>
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- </property>
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- <property name="value">
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- <double>0.100000000000000</double>
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- </property>
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- </widget>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_6">
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- <item>
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- <widget class="QLabel" name="label_2">
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- <property name="text">
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- <string>Time offset for video/audio reposition (seconds)</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QSpinBox" name="sbRepositionTimeOffset">
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- <property name="minimum">
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- <number>-10000</number>
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- </property>
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- <property name="maximum">
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- <number>10000</number>
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- </property>
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- <property name="value">
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- <number>-3</number>
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- </property>
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- </widget>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <widget class="QCheckBox" name="cbConfirmSound">
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- <property name="text">
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- <string>Play sound when a key is pressed</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QCheckBox" name="cbCloseSameEvent">
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- <property name="text">
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- <string>Close the same current event independently of modifiers</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_8">
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- <item>
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- <widget class="QLabel" name="label_8">
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- <property name="text">
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- <string>Beep every (seconds)</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QSpinBox" name="sbBeepEvery"/>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <widget class="QCheckBox" name="cb_display_subtitles">
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- <property name="text">
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- <string>Display subtitles</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QCheckBox" name="cbTrackingCursorAboveEvent">
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- <property name="text">
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- <string>Tracking cursor above current event</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QCheckBox" name="cbAlertNoFocalSubject">
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- <property name="text">
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- <string>Alert if focal subject is not set</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QCheckBox" name="cb_pause_before_addevent">
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- <property name="text">
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- <string>Pause media before &quot;Add event&quot; command</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <spacer name="verticalSpacer_4">
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- <property name="orientation">
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- <enum>Qt::Vertical</enum>
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- </property>
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- <property name="sizeHint" stdset="0">
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- <size>
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- <width>20</width>
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- <height>391</height>
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- </size>
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- </property>
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- </spacer>
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- </item>
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- </layout>
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- </widget>
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- <widget class="QWidget" name="tab_2">
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- <attribute name="title">
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- <string>FFmpeg framework</string>
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- </attribute>
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- <layout class="QVBoxLayout" name="verticalLayout_4">
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- <item>
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- <layout class="QVBoxLayout" name="verticalLayout_3">
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- <item>
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- <widget class="QLabel" name="lbFFmpegPath">
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- <property name="text">
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- <string>FFmpeg path:</string>
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- </property>
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- <property name="scaledContents">
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- <bool>false</bool>
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- </property>
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- <property name="wordWrap">
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- <bool>true</bool>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout"/>
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- </item>
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_3">
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- <item>
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- <widget class="QLabel" name="lbFFmpegCacheDir">
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- <property name="text">
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- <string>FFmpeg cache directory</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QLineEdit" name="leFFmpegCacheDir"/>
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- </item>
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- <item>
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- <widget class="QPushButton" name="pbBrowseFFmpegCacheDir">
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- <property name="text">
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- <string>...</string>
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- </property>
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- </widget>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <spacer name="verticalSpacer">
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- <property name="orientation">
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- <enum>Qt::Vertical</enum>
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- </property>
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- <property name="sizeHint" stdset="0">
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- <size>
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- <width>20</width>
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- <height>40</height>
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- </size>
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- </property>
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- </spacer>
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- </item>
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- </layout>
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- </item>
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- </layout>
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- </widget>
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- <widget class="QWidget" name="tab_4">
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- <attribute name="title">
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- <string>Spectrogram/Wave form</string>
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- </attribute>
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- <layout class="QVBoxLayout" name="verticalLayout_8">
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_7">
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- <item>
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- <widget class="QLabel" name="label_7">
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- <property name="text">
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- <string>Spectrogram color map</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QComboBox" name="cbSpectrogramColorMap"/>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_10">
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- <item>
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- <widget class="QLabel" name="label_12">
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- <property name="text">
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- <string>Default time interval (s)</string>
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- </property>
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- </widget>
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- </item>
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- <item>
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- <widget class="QSpinBox" name="sb_time_interval">
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- <property name="minimum">
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- <number>2</number>
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- </property>
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- <property name="maximum">
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- <number>360</number>
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- </property>
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- <property name="value">
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- <number>10</number>
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- </property>
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- </widget>
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- </item>
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- </layout>
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- </item>
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- <item>
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- <spacer name="verticalSpacer_3">
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- <property name="orientation">
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- <enum>Qt::Vertical</enum>
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- </property>
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- <property name="sizeHint" stdset="0">
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- <size>
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- <width>20</width>
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- <height>319</height>
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- </size>
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- </property>
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- </spacer>
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- </item>
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- </layout>
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- </widget>
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- <widget class="QWidget" name="tab_5">
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- <attribute name="title">
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- <string>Plot colors</string>
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- </attribute>
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- <layout class="QVBoxLayout" name="verticalLayout_10">
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- <item>
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- <layout class="QHBoxLayout" name="horizontalLayout_12">
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- <item>
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- <layout class="QVBoxLayout" name="verticalLayout_6">
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- <item>
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- <widget class="QLabel" name="label_10">
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- <property name="text">
444
- <string>&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;List of colors for behaviors. See &lt;a href=&quot;https://matplotlib.org/api/colors_api.html&quot;&gt;&lt;span style=&quot; text-decoration: underline; color:#0000ff;&quot;&gt;matplotlib colors&lt;/span&gt;&lt;/a&gt;&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;</string>
445
- </property>
446
- <property name="openExternalLinks">
447
- <bool>true</bool>
448
- </property>
449
- </widget>
450
- </item>
451
- <item>
452
- <widget class="QPlainTextEdit" name="te_behav_colors"/>
453
- </item>
454
- <item>
455
- <widget class="QPushButton" name="pb_reset_behav_colors">
456
- <property name="text">
457
- <string>Reset colors to default</string>
458
- </property>
459
- </widget>
460
- </item>
461
- </layout>
462
- </item>
463
- <item>
464
- <layout class="QVBoxLayout" name="verticalLayout_9">
465
- <item>
466
- <widget class="QLabel" name="label_11">
467
- <property name="text">
468
- <string>&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;List of colors for behavioral categories. See &lt;a href=&quot;https://matplotlib.org/api/colors_api.html&quot;&gt;&lt;span style=&quot; text-decoration: underline; color:#0000ff;&quot;&gt;matplotlib colors&lt;/span&gt;&lt;/a&gt;&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;</string>
469
- </property>
470
- <property name="openExternalLinks">
471
- <bool>true</bool>
472
- </property>
473
- </widget>
474
- </item>
475
- <item>
476
- <widget class="QPlainTextEdit" name="te_category_colors"/>
477
- </item>
478
- <item>
479
- <widget class="QPushButton" name="pb_reset_category_colors">
480
- <property name="text">
481
- <string>Reset colors to default</string>
482
- </property>
483
- </widget>
484
- </item>
485
- </layout>
486
- </item>
487
- </layout>
488
- </item>
489
- </layout>
490
- </widget>
491
- </widget>
492
- </item>
493
- <item>
494
- <layout class="QHBoxLayout" name="horizontalLayout_2">
495
- <item>
496
- <spacer name="horizontalSpacer">
497
- <property name="orientation">
498
- <enum>Qt::Horizontal</enum>
499
- </property>
500
- <property name="sizeHint" stdset="0">
501
- <size>
502
- <width>241</width>
503
- <height>20</height>
504
- </size>
505
- </property>
506
- </spacer>
507
- </item>
508
- <item>
509
- <widget class="QPushButton" name="pb_refresh">
510
- <property name="text">
511
- <string>Refresh</string>
512
- </property>
513
- </widget>
514
- </item>
515
- <item>
516
- <widget class="QPushButton" name="pbCancel">
517
- <property name="text">
518
- <string>Cancel</string>
519
- </property>
520
- </widget>
521
- </item>
522
- <item>
523
- <widget class="QPushButton" name="pbOK">
524
- <property name="text">
525
- <string>OK</string>
526
- </property>
527
- </widget>
528
- </item>
529
- </layout>
530
- </item>
531
- </layout>
532
- </item>
533
- </layout>
534
- </widget>
535
- <resources/>
536
- <connections/>
537
- </ui>