bmtool 0.6.9.26__py3-none-any.whl → 0.6.9.27__py3-none-any.whl

bmtool/analysis/netcon_reports.py

@@ -4,7 +4,7 @@ import xarray as xr
 import pandas as pd
 from ..util.util import load_nodes_from_config
 
-def load_synapse_report(h5_file_path, config_path):
+def load_synapse_report(h5_file_path, config_path, network):
     """
     Load and process a synapse report from a bmtk simulation into an xarray.
     
@@ -23,7 +23,7 @@ def load_synapse_report(h5_file_path, config_path):
     # Load the h5 file
     with h5py.File(h5_file_path, 'r') as file:
         # Get the report data
-        report = file['report']['cortex']
+        report = file['report'][network]
         mapping = report['mapping']
         
         # Get the data - shape is (n_timesteps, n_synapses)
@@ -47,10 +47,10 @@ def load_synapse_report(h5_file_path, config_path):
         
     # Load node information
     nodes = load_nodes_from_config(config_path)
-    cortex_nodes = nodes['cortex']
+    nodes = nodes[network]
     
     # Create a mapping from node IDs to population names
-    node_to_pop = dict(zip(cortex_nodes.index, cortex_nodes['pop_name']))
+    node_to_pop = dict(zip(nodes.index, nodes['pop_name']))
     
     # Get the number of synapses
     n_synapses = data.shape[1]

{bmtool-0.6.9.26.dist-info → bmtool-0.6.9.27.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: bmtool
-Version: 0.6.9.26
+Version: 0.6.9.27
 Summary: BMTool
 Home-page: https://github.com/cyneuro/bmtool
 Download-URL: 

{bmtool-0.6.9.26.dist-info → bmtool-0.6.9.27.dist-info}/RECORD

@@ -11,7 +11,7 @@ bmtool/synapses.py,sha256=Ow2fZavA_3_5BYCjcgPjW0YsyVOetn1wvLxL7hQvbZo,64556
 bmtool/analysis/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 bmtool/analysis/entrainment.py,sha256=GCytdEdCbHwF5yJ4vfK947YLxbBfA88-zSnf2n26fjk,17618
 bmtool/analysis/lfp.py,sha256=pMXhqWO5TB-B1cIkR9ZhPgJZi7zpiqrGdRb-JNjjI2Y,18707
-bmtool/analysis/netcon_reports.py,sha256=WWh12H9gjEZXhI_q7RErgGQ9iSPoTvCUnUjwNGxRwsY,3071
+bmtool/analysis/netcon_reports.py,sha256=7moyoUC45Cl1_6sGqwZ5aKphK_8i4AimroePXcgUnIo,3057
 bmtool/analysis/spikes.py,sha256=x24kd0RUhumJkiunfHNEE7mM6JUqdWy1gqabmkMM4cU,14129
 bmtool/debug/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 bmtool/debug/commands.py,sha256=AwtcR7BUUheM0NxvU1Nu234zCdpobhJv5noX8x5K2vY,583
@@ -21,9 +21,9 @@ bmtool/util/commands.py,sha256=zJF-fiLk0b8LyzHDfvewUyS7iumOxVnj33IkJDzux4M,64396
 bmtool/util/util.py,sha256=XR0qZnv_Q47jMBKQpFzCSkCuKe9u8L3YSGJAOpP2zT0,57630
 bmtool/util/neuron/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 bmtool/util/neuron/celltuner.py,sha256=xSRpRN6DhPFz4q5buq_W8UmsD7BbUrkzYBEbKVloYss,87194
-bmtool-0.6.9.26.dist-info/licenses/LICENSE,sha256=qrXg2jj6kz5d0EnN11hllcQt2fcWVNumx0xNbV05nyM,1068
-bmtool-0.6.9.26.dist-info/METADATA,sha256=Gmua9ix4SE_bNrtjQQjAFGZA3os31l3-8FC4I4Su36Q,2769
-bmtool-0.6.9.26.dist-info/WHEEL,sha256=ooBFpIzZCPdw3uqIQsOo4qqbA4ZRPxHnOH7peeONza0,91
-bmtool-0.6.9.26.dist-info/entry_points.txt,sha256=0-BHZ6nUnh0twWw9SXNTiRmKjDnb1VO2DfG_-oprhAc,45
-bmtool-0.6.9.26.dist-info/top_level.txt,sha256=gpd2Sj-L9tWbuJEd5E8C8S8XkNm5yUE76klUYcM-eWM,7
-bmtool-0.6.9.26.dist-info/RECORD,,
+bmtool-0.6.9.27.dist-info/licenses/LICENSE,sha256=qrXg2jj6kz5d0EnN11hllcQt2fcWVNumx0xNbV05nyM,1068
+bmtool-0.6.9.27.dist-info/METADATA,sha256=nAFsZqm3J7bCCj-dx0V9YZM6NWswxxZ26VAu2JeOvQM,2769
+bmtool-0.6.9.27.dist-info/WHEEL,sha256=wXxTzcEDnjrTwFYjLPcsW_7_XihufBwmpiBeiXNBGEA,91
+bmtool-0.6.9.27.dist-info/entry_points.txt,sha256=0-BHZ6nUnh0twWw9SXNTiRmKjDnb1VO2DfG_-oprhAc,45
+bmtool-0.6.9.27.dist-info/top_level.txt,sha256=gpd2Sj-L9tWbuJEd5E8C8S8XkNm5yUE76klUYcM-eWM,7
+bmtool-0.6.9.27.dist-info/RECORD,,

{bmtool-0.6.9.26.dist-info → bmtool-0.6.9.27.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (80.0.1)
+Generator: setuptools (80.1.0)
 Root-Is-Purelib: true
 Tag: py3-none-any