bmtool 0.3.8__py3-none-any.whl → 0.3.9__py3-none-any.whl

bmtool/bmplot.py

@@ -483,13 +483,17 @@ def cell_rotation_3d(**kwargs):
             uvw = pd.DataFrame([U,V,W]).T
             init_vector = init_vector.split(',')
             init_vector = np.repeat([init_vector],len(X),axis=0)
+            
             # To get the final cell orientation after rotation, 
             # you need to use function Rotaion.apply(init_vec), 
             # where init_vec is a vector of the initial orientation of a cell
-            rots = R.from_euler('xyz', uvw).apply(init_vector.astype(float))
-            rots = R.from_euler('xyz', pd.DataFrame([rots[:,0],rots[:,1],rots[:,2]]).T).as_rotvec().T
+            #rots = R.from_euler('xyz', uvw).apply(init_vector.astype(float))
+            #rots = R.from_euler('xyz', pd.DataFrame([rots[:,0],rots[:,1],rots[:,2]]).T).as_rotvec().T
 
+            rots = R.from_euler('zyx', uvw).apply(init_vector.astype(float)).T
             h = ax.quiver(X, Y, Z, rots[0],rots[1],rots[2],color=color,label=group_name, arrow_length_ratio = arrow_length_ratio, length=quiver_length)
+
+            #h = ax.quiver(X, Y, Z, rots[0],rots[1],rots[2],color=color,label=group_name, arrow_length_ratio = arrow_length_ratio, length=quiver_length)
             ax.scatter(X,Y,Z,color=color,label=group_name)
             handles.append(h)
     if not handles:

{bmtool-0.3.8.dist-info → bmtool-0.3.9.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bmtool
-Version: 0.3.8
+Version: 0.3.9
 Summary: BMTool
 Home-page: https://github.com/tjbanks/bmtool
 Download-URL: 

{bmtool-0.3.8.dist-info → bmtool-0.3.9.dist-info}/RECORD

@@ -1,6 +1,6 @@
 bmtool/__init__.py,sha256=FrcSFNlD5lhNIWDYrX0kZiBYS_lDSK5rBkSXMuDoEWg,141
 bmtool/__main__.py,sha256=61s3Dd4-brkJt_amGpGapdIoV-3QNPbjRvIVQHlfZZI,676
-bmtool/bmplot.py,sha256=_TU3cVTM5sFygZeZ8_4oiuYNypfACEnH3fn--MiNmQU,29471
+bmtool/bmplot.py,sha256=pf7TKzjHAEIqRCQiEdzJho3IXCBhr2-VDopRIP54EzQ,29723
 bmtool/manage.py,sha256=ALYltiBaljm1pBtz-0ifvrkrzlPNDiIu7Lr5q3-_oFU,688
 bmtool/plot.py,sha256=C1novNnisc_7IuQbY4p4ZbYcgj11UttUIqnHtpqHoJs,25374
 bmtool/plot_commands.py,sha256=U3up0PLZN8drcjyLsbrhsA4mVh9iXX-5dt0NsXgfjxI,12528
@@ -30,9 +30,9 @@ bmtools/cli/plugins/util/commands.py,sha256=7BRj6PEm5XCQaYk4EhIGvqXNcsCbykw3I9l9
 bmtools/cli/plugins/util/util.py,sha256=ir7omOJgAMO3RxIKI39ZpIzI6to9LqToI6Dck4wkLyw,50126
 bmtools/cli/plugins/util/neuron/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 bmtools/cli/plugins/util/neuron/celltuner.py,sha256=d3WTbEq4WW6koHc5TdiUGGm2JWJU3LuPeiAFtUiaMgM,89264
-bmtool-0.3.8.dist-info/LICENSE,sha256=eOgqgvoeIS9FFSJjHbxCyfHyXdHUhk2YHLqQlWWzdXk,1089
-bmtool-0.3.8.dist-info/METADATA,sha256=zbdjrysnGgg3p7Rpcwc_mYX42RKsuocuORBO4UleHP8,17987
-bmtool-0.3.8.dist-info/WHEEL,sha256=pkctZYzUS4AYVn6dJ-7367OJZivF2e8RA9b_ZBjif18,92
-bmtool-0.3.8.dist-info/entry_points.txt,sha256=0-BHZ6nUnh0twWw9SXNTiRmKjDnb1VO2DfG_-oprhAc,45
-bmtool-0.3.8.dist-info/top_level.txt,sha256=gpd2Sj-L9tWbuJEd5E8C8S8XkNm5yUE76klUYcM-eWM,7
-bmtool-0.3.8.dist-info/RECORD,,
+bmtool-0.3.9.dist-info/LICENSE,sha256=eOgqgvoeIS9FFSJjHbxCyfHyXdHUhk2YHLqQlWWzdXk,1089
+bmtool-0.3.9.dist-info/METADATA,sha256=c5iCJrjQ193_4LcJ1maVtBkBz3hF8y2GwmMlzN4CGIc,17987
+bmtool-0.3.9.dist-info/WHEEL,sha256=pkctZYzUS4AYVn6dJ-7367OJZivF2e8RA9b_ZBjif18,92
+bmtool-0.3.9.dist-info/entry_points.txt,sha256=0-BHZ6nUnh0twWw9SXNTiRmKjDnb1VO2DfG_-oprhAc,45
+bmtool-0.3.9.dist-info/top_level.txt,sha256=gpd2Sj-L9tWbuJEd5E8C8S8XkNm5yUE76klUYcM-eWM,7
+bmtool-0.3.9.dist-info/RECORD,,