biotite 1.3.0__cp312-cp312-win_amd64.whl → 1.5.0__cp312-cp312-win_amd64.whl

{biotite-1.3.0.dist-info → biotite-1.5.0.dist-info}/RECORD

@@ -2,7 +2,7 @@ biotite/__init__.py,sha256=gzqOy5P7Zf667uYuUwqjLLW0GiBdqc23NLcZaXMuHKw,563
 biotite/copyable.py,sha256=Qnja44k58dAc3WkIUM0svqrbvqO9pSV-Atr9MUJSoCI,1968
 biotite/file.py,sha256=ktpRUk0OH5_wKIJHtCX3zDjXeJ3eQ4ycDjpp7HttUYM,6977
 biotite/setup_ccd.py,sha256=9StRz4qPVdTJNrPUoA_liwvkKnTb8O0U8PDxt1tDVwc,6248
-biotite/version.py,sha256=gjq5-5A1fJztrO0JABjZYm7eEvg0FysPGOYPEkyBwM8,532
+biotite/version.py,sha256=a0LCpMUrWvoHmGZMFOnfkJM72arixdqmkpppsg9N0JI,738
 biotite/visualize.py,sha256=z4lBfJAt5YxGqtgxgcLHKMwVcE4u6fqExEyrOHcSiaY,14330
 biotite/application/__init__.py,sha256=Rei3EwlpCnC_cJNQoTJYY_Gw_qLdsqgnRxV5b1slHJU,3148
 biotite/application/application.py,sha256=J9ydVvN_5C3nYuLl12EPBhM67i0GQm6MPy0F1K-jdgc,8372
@@ -18,7 +18,7 @@ biotite/application/blast/webapp.py,sha256=7-r_Jw7gHysUb8Zjsv5mc0WyFdbWblamqVXYq
 biotite/application/clustalo/__init__.py,sha256=UtEQiS9nDZF9-Sup3kbi06mTjv6YRD9Qbu5A722bNlY,338
 biotite/application/clustalo/app.py,sha256=hBnmdh2nhA1ipxz4OzVZ52UMyA0hqxf_MAej3bygbWU,7637
 biotite/application/dssp/__init__.py,sha256=smuKF9_8g5xzY-MFjYXTYa3wbTfQD4g6L3TDCfMTr8w,335
-biotite/application/dssp/app.py,sha256=ZBgW5R5Y1nt1D69imUpc_79-XPm9N3yqfdZKxgVc8-M,5482
+biotite/application/dssp/app.py,sha256=0HwYT2XDo8nPPtixlLUfL-rPAZkt4wjtMKEuogQQ57Q,7828
 biotite/application/mafft/__init__.py,sha256=urPUmmuKAsB9DQeEeaj8EDt3uL0UjgBSo76H2HnLsLs,327
 biotite/application/mafft/app.py,sha256=W_iWXuaO0CaCFpnTyawlmQ1P0wt9pnGnwr-AzAudLM0,3397
 biotite/application/muscle/__init__.py,sha256=26qqctlXpZqoFBD1K_y_Zv7QZfDdMHOodGAXW20r42Q,351
@@ -36,7 +36,7 @@ biotite/application/viennarna/util.py,sha256=lfssotSqZl4cO1ibgtgXgEFVzL9s1xMM-99
 biotite/database/__init__.py,sha256=N3PuLKuEbQ0J55CddwryBGiLfYSazC697F8KnxizrKY,748
 biotite/database/error.py,sha256=L_FvDa-F4XUaCIVo6ZtLXIMn6P-cv783lvxR_Rtluqw,426
 biotite/database/afdb/__init__.py,sha256=SMcUJ0mPNdc-bnnW3wlsw7sDyBwGfU-_2Z2Dt_nB6xo,345
-biotite/database/afdb/download.py,sha256=GMyGuT5RHSWXdwA712_1yLWwloEBgJEWsbLTtVVs6vs,6558
+biotite/database/afdb/download.py,sha256=kXhNvxKQJETZlbBTdNUPlmMjPyF32adr5PIv_HPVZHw,6876
 biotite/database/entrez/__init__.py,sha256=88kXhS1XqXb4exnfZIaKD98t3RH3gEZBiNR-aBhl-OE,403
 biotite/database/entrez/check.py,sha256=3JQZshjekA1woJll6UefEsUZ8kMw-MG1uh86jGgDomQ,1913
 biotite/database/entrez/dbnames.py,sha256=uQ5t5PCb1qrAmAdh8xWzO0WPWY3DybkW-JS4BRjQiR0,2873
@@ -49,8 +49,8 @@ biotite/database/pubchem/error.py,sha256=zQKHntwQDkcdm2ImKQgta2V45KeUaFfmM8tTaVw
 biotite/database/pubchem/query.py,sha256=NJoFI-feTXivZfa6AoJGJDrYA6v_CEQSQjR5dDExvTM,26905
 biotite/database/pubchem/throttle.py,sha256=V4RzypMfh1IaBC8yZrH1l8W1k7v2KLpj1_fK94k-__w,3384
 biotite/database/rcsb/__init__.py,sha256=BKYOAhSIX1zb00wp_6bw30M7XGliu64B35Dm2Gf-A14,345
-biotite/database/rcsb/download.py,sha256=hknojHvR_pj6Q_zwuHEJbQudOZehRG0dBsHZzlQkTfk,5836
-biotite/database/rcsb/query.py,sha256=Dvpp7nV4UwPH_3gVmIyHmvP4AsIHGQcgoZPUDkULG-4,33858
+biotite/database/rcsb/download.py,sha256=xqaazuObTNsuhcebeJhvn6_kRomjnIET-wTklEGQ4q4,5918
+biotite/database/rcsb/query.py,sha256=A0omwS_Ax4Jd0bvgpuRW8f-NW5_5LS59ehTQQJphgR4,33860
 biotite/database/uniprot/__init__.py,sha256=0U1mt1nphhPZomlauOeMEVDfFx-6Npyi2eGsf6ztH6E,347
 biotite/database/uniprot/check.py,sha256=cVF0UfiUCT2nZ1jLWVfs1Ygghzx30ZXy1yj2vvASL1A,1418
 biotite/database/uniprot/download.py,sha256=7hv050jxaeVQpmKiAEG_pRsyEtHbiTH-6Qc1VUsjBpk,4360
@@ -65,11 +65,11 @@ biotite/interface/pymol/__init__.py,sha256=fL56vVJ0Ro-3aftoE3lBVRmwPRl2iHWhsnSEB
 biotite/interface/pymol/cgo.py,sha256=naAQ-5R2wpsbXy3UkjkFvGkzRx8xVr53qlGpltyRO8I,10205
 biotite/interface/pymol/convert.py,sha256=mukBkBjGO0kv5Ec_ALG9i3BPYUCap1Zf1LiIJvBLrZw,6229
 biotite/interface/pymol/display.py,sha256=R8vgVRoByPr_mkhm81fJdtzyZCMzRj8jyfviNPAfTLU,8725
-biotite/interface/pymol/object.py,sha256=t_sT7lu1Vh_jC0uzzv7ydSf02jzeClT4tfiPN9fIMyY,45419
+biotite/interface/pymol/object.py,sha256=-eegu5qwye8_WE_89baCsk7nfqeHpQo50VoXPa4dCjA,45508
 biotite/interface/pymol/shapes.py,sha256=w0_fBczmPtI3tQrmrwOp8owg6WUfhX3qXhKXibtfwBA,6244
 biotite/interface/pymol/startup.py,sha256=vHdpd3RusQXJr9PSPbJxWbo8CuJSN4YpecNCM0az1Ak,4788
 biotite/interface/rdkit/__init__.py,sha256=0hPcE6j-HKorkcFq3thhx6k2BEjeo0bbwuCGTEqB5YI,551
-biotite/interface/rdkit/mol.py,sha256=GH0iSrs54qNWSZbVjPw3T0hjJbTWkCFjTwpq8ef7XTI,20134
+biotite/interface/rdkit/mol.py,sha256=EbNDkS0EqjJ6IxDIJHrAjMParbIDkfZpjjRY9R9L5M8,20119
 biotite/sequence/__init__.py,sha256=fUoOYLTavBTicHu-JCQkvrCAyRfKRspfCItufOBDGGE,3507
 biotite/sequence/alphabet.py,sha256=rI3KC_U05_gdLdXypGDicmJWvU2ruISMlCxr-NGPi0E,17782
 biotite/sequence/annotation.py,sha256=XeVjiagSR5aVIRywAIl927Iwdgni4VKj7SyQJjP9Wkw,30541
@@ -239,19 +239,19 @@ biotite/sequence/phylo/nj.pyx,sha256=YOseJP7fKCnqhh8w3mK1z3fw6cKF5sU5oRkb1D3X9vI
 biotite/sequence/phylo/tree.pyx,sha256=kmT2kO9cH3svQOxsyuPLfbUsWnTNdfVrx5xaxcmTC3I,40374
 biotite/sequence/phylo/upgma.pyx,sha256=llgc-9fEOU-D1a-ESMSIAoPjHvsd_L0-GnwkL-uzWNc,5376
 biotite/structure/__init__.py,sha256=nTlutppQQCPYYPH0MXB104--L70rOPUj6P8CcRDyUKA,5623
-biotite/structure/atoms.py,sha256=x6SnfqCTZIWWReEh62YDUTF3sPjjJKkldDYqu2XigDk,52406
+biotite/structure/atoms.py,sha256=O44og4-KvdmHv2ogAHkCRo9p-D228XxWvy2ueXjL8Ro,52399
 biotite/structure/basepairs.py,sha256=4IfbB0yE7-a1cGnMmYwpCu53zVBiJBOyGJ-TxzzigmY,51311
-biotite/structure/bonds.pyx,sha256=mFJxrbNtGDHQWdSD5KwEJgGsIsfZBo8B18C4DvknYvo,71734
-biotite/structure/box.py,sha256=ryQDQc0PkuPHfk7dRdMMVUreKWGhbZGPOZZUwhtCaW4,24112
+biotite/structure/bonds.pyx,sha256=b3MKKo_ttNUNfoDCCaxrYKNhpNgwOcPdGe2pd-ZrreA,73827
+biotite/structure/box.py,sha256=8JjPHYdc0_SQsMSb6i05GmghW8O0KQZ20ZrSgtKYuXo,24120
 biotite/structure/celllist.pyx,sha256=tZXwbuN1QACGG2lHiA71ZMtfcdcvypoxCyRdodKFvyU,35427
-biotite/structure/chains.py,sha256=Xv9VwUQbko6Yg7zCqwNAUCm7x6qTciQ0NqUUSRYmswo,8600
+biotite/structure/chains.py,sha256=uEGd7AHk-UHjQm1o_vYSeSWs5tbu7YpOv2LFi1BSpn0,9657
 biotite/structure/charges.pyx,sha256=ZqQeMaSr0kjgBWRN_mYWBXV6wYtglADRrvY4ZQ0KKSU,19341
-biotite/structure/compare.py,sha256=h6v6pAVxLiDKzeEbFltI9OuLtVBNVCAmFU7m8whFcKE,28034
+biotite/structure/compare.py,sha256=Sy9xVcDY0sELBHcVfvXV9fn6OawgUjGGyKOTnWwavqM,28120
 biotite/structure/density.py,sha256=bCRVos_1LF2Uqq8fmVnZNhRUdDupdTXgPem-bkca24s,4306
 biotite/structure/dotbracket.py,sha256=1aOy386N6H666YK_vVaE1Ed28Xx9-OlW9jWLI51v0U4,7411
 biotite/structure/error.py,sha256=NaQBi7CGUYpa7-Y9t0We8iVEJwqpsNWLXkr1PTBKlxQ,822
-biotite/structure/filter.py,sha256=Iw5G6Qa53D6ZA-XH0fLY-vosl6AZHMJtmIvs4hcHc94,18585
-biotite/structure/geometry.py,sha256=vAMYYyTU-wrhx5twVYLrtan0UEdLmG-C-opuTZjhHjM,24331
+biotite/structure/filter.py,sha256=-5okdIyY5TmLQzeA2ra5LZ1e1N_VVdZTGJqLWhDAlww,18717
+biotite/structure/geometry.py,sha256=ycXKiQKahVmUMCmUx985z44bck3CzgLS6vULhNKN9c8,30098
 biotite/structure/hbond.py,sha256=prj1l763yMQGPWL41HoLtSpiDveHoMVP7dlUNYO9pjE,15617
 biotite/structure/integrity.py,sha256=v1lJrEcvH_bdV0-5ToIKBPWKV5Mq-TDSlSFZgRjn614,6976
 biotite/structure/mechanics.py,sha256=hg1wre3uPAuXfyZ976mryvd0_Db1UE-iTLE9qjfwijw,2659
@@ -259,10 +259,10 @@ biotite/structure/molecules.py,sha256=VdfD4w5cbbT4_qQdNHYgIjqwQSvaS-SbfNE5ytNCBq
 biotite/structure/pseudoknots.py,sha256=8kknr_m4eUsVdJUe2gPRofWkWP9NYgOU-NAmJw2oPEc,22716
 biotite/structure/rdf.py,sha256=XAkbnbfk0wx_cIlrDYXBMUzzShgICUCpyPPfTNviWBQ,8349
 biotite/structure/repair.py,sha256=MqWQTIOH67giGQ-_yRFARa0uqNFRHHOb-PwSBkdzUL4,7298
-biotite/structure/residues.py,sha256=3g3b1SBh-euil6wKg-WSNJWwhhsUp2BUAI68-Yhgu14,22378
-biotite/structure/rings.py,sha256=2lkqhvlR1ENvmbXpzXg5stzh1mVfLwSXGBSLrtXUzYY,11781
+biotite/structure/residues.py,sha256=ly9chJtAtdfebJ2mVOAWMCXOjUG6-ktXlChl8l0dRxE,29119
+biotite/structure/rings.py,sha256=XF4wH_nCIswVgtC22gF81nxDvwyWO2gRKtNLoJgxiIs,16035
 biotite/structure/sasa.pyx,sha256=Vp-WbGMa2HduTf9KDOoR4IQnarUGemVqjVyn_PbFGhU,13239
-biotite/structure/segments.py,sha256=ZfU1WtimhcvXy0tWv7AYbW1wis04_DtxC4Eal2u2JrM,10033
+biotite/structure/segments.py,sha256=LfdrVVkXGi47q4dMkY9snp6IISuO4BYoT-ZHWQhheHc,11113
 biotite/structure/sequence.py,sha256=RFayTEC85_ETGq0mQVX0gy3tZU6-dTQStyReVzauTqU,4355
 biotite/structure/spacegroups.json,sha256=C3O--eJKKKOScmCyqPAElFh-qTlMN5f4EkzxWfhaigs,53125
 biotite/structure/spacegroups.license,sha256=-9GpM4nLKzKQgPXGf1PNUXhCM8CQUm79QWFA40KG_aY,1323
@@ -270,7 +270,7 @@ biotite/structure/sse.py,sha256=Th5LBvwV6x94d1vbBdxFnKGBqaPxDkTit9qNgeFBC78,1171
 biotite/structure/superimpose.py,sha256=cE2Q3E0YXzYh6KDhYcBbBi2O1c1O2ZIPUbBlGNEvh2Q,20073
 biotite/structure/tm.py,sha256=dzLLD3GYPFsVgXgND8-fZT2Y3pp0FDA6S_Z8QJUr9S0,21548
 biotite/structure/transform.py,sha256=WZ6fysoP2OR-tpJxSjNmCkUVqdBwCCnCYRyWa4hPP1k,27711
-biotite/structure/util.py,sha256=7X_h7YYzwXLYc2XjFR-BQPAosNCqdZnxbbfonyO-NGA,5127
+biotite/structure/util.py,sha256=4RFmNVWBahav330Cd9YbxJIAmBO9FHzSeV5oGPl9lEY,4558
 biotite/structure/alphabet/__init__.py,sha256=UxJZ1_WsI1SPs89ZGv4Xmr-n0pWwlQcBBglfJEXzanY,953
 biotite/structure/alphabet/encoder.py,sha256=OMQXiMo6xnhIsWoCZ2xKvGpV28k24lM8LhL9cZDDFNE,11715
 biotite/structure/alphabet/encoder_weights_3di.kerasify,sha256=m4JF4oVWBbiu6r8DM9ONQ5Bmcbqwr5dxKfqYThOmHpk,1032
@@ -284,10 +284,10 @@ biotite/structure/graphics/atoms.py,sha256=acZXrWVRblk83FfLePe3pHoMcjJJH2eEDyZFm
 biotite/structure/graphics/rna.py,sha256=g3Rxzz2nCFXKv6IXCuKd9nnN57SI5WZtAcjzxRAhHtw,12140
 biotite/structure/info/__init__.py,sha256=D1ure7j8lAfbLGqQricxHLuiDHf0FLzV_p4m5rd0dPQ,722
 biotite/structure/info/atom_masses.json,sha256=DJ2YMCN4Fvn0zzT91N6TotoLMPm_EkeOF23Yjb5mvGg,2504
-biotite/structure/info/atoms.py,sha256=rBmzMqUffYmKuQVVHFEz-SaaFSrsRSLFoMwa8dzYYZg,3100
+biotite/structure/info/atoms.py,sha256=cjswMLpmM6Vv9A944oR9WLZkQV9uFEZY4x1c-2MmxR4,3369
 biotite/structure/info/bonds.py,sha256=7qp4EYo61x6j7OK9Eyolh7Pmg4PU8Rodr5_KfmnyzP8,4793
 biotite/structure/info/ccd.py,sha256=o0Jb7YYJbYpyljfNGiqXF6bXP7IUlCY3cRMQj1EyWvg,6051
-biotite/structure/info/components.bcif,sha256=ouff7fpRp47Fq6CYsKBZlLpHkaN6x6X6q-dVnRs7uro,59990720
+biotite/structure/info/components.bcif,sha256=mQrO6PEOkPNw2i1DHp5qugNyDx0g-2d_uV-T4KD1bwI,62070945
 biotite/structure/info/groups.py,sha256=0NTOaFgvqf-yWTMNiZguVx6i0sVWXB-AhnPyhuRcK5o,3312
 biotite/structure/info/masses.py,sha256=s8heq0bG33-6NTeRqA2WpoOqUy-mwQTfM5a7CWA0YE0,4676
 biotite/structure/info/misc.py,sha256=_-TSbBsZ70fv3Kcwa-28LTOOZpLJZkHE23XjvysLdF4,3565
@@ -310,45 +310,45 @@ biotite/structure/io/mol/sdf.py,sha256=yV0ROsMsMAN0Y6rgLSri4KVsHwxoBrln4ANldqihM
 biotite/structure/io/netcdf/__init__.py,sha256=BVUimn1EklpgdoCFE5sC-H4E47exDe_xIviMeGnn_tk,363
 biotite/structure/io/netcdf/file.py,sha256=8jht6qCgw0Q7q1-WaQ1iCBjc1QLzjrwpppe3uBZhZ1Y,2256
 biotite/structure/io/pdb/__init__.py,sha256=UqePAxP48oww8SEexxr6JlugRua8wgOryAvxmHd58f4,753
-biotite/structure/io/pdb/convert.py,sha256=EN9-10tp_ZZ199lhJNHMUA7jp1IO0FfRaxRHD20wSNw,14188
-biotite/structure/io/pdb/file.py,sha256=ncGCHbdrk4jlC0TkOt6HenEgOMcYUugPP5UYwu0xs6I,54991
+biotite/structure/io/pdb/convert.py,sha256=YMeoXWE2OMU0fcyTMPPPAK0XMdprG3QdK0uNSK5dS6s,14215
+biotite/structure/io/pdb/file.py,sha256=6-F4HEVEiv18dHZlQJACDLrfudv-N7bfngWMfhdp7S4,55937
 biotite/structure/io/pdb/hybrid36.pyx,sha256=-feGX_k9H7uAfbqmy37PvlWbuij-mknpbCR2ot1l4kk,8277
 biotite/structure/io/pdbqt/__init__.py,sha256=JiBnbhNHevtmVIwEeYBubOzK5xu1d9dSny7Zf3Aas74,456
 biotite/structure/io/pdbqt/convert.py,sha256=M2SytCYO2ihvpcUQCqz4PD4DAKwCPxcjGbhFhJjbDZY,4121
 biotite/structure/io/pdbqt/file.py,sha256=Jl4DiewnIGd9UeVruhTxkZaclIW94aYpMDBHB37PVtc,27326
 biotite/structure/io/pdbx/__init__.py,sha256=0G68Qdc29KdXt0R9di2uBv4r173kuXXqGCbMtDdth0E,740
-biotite/structure/io/pdbx/bcif.py,sha256=cpl55pbDDlQKWZDkTZsgMDZKWv303AvedV3-n5Y05OA,21808
-biotite/structure/io/pdbx/cif.py,sha256=7jaC3DueZ0m738nFGYfkMkseXDiMhiBKWF0Gx_fk6AI,35956
+biotite/structure/io/pdbx/bcif.py,sha256=vYZIaoZnLHL6Da6n0oKjWjHpwUt33LKvxPqbB7DQ3nw,21922
+biotite/structure/io/pdbx/cif.py,sha256=rGITCwhzG271cnB0Ik1-ktdqUfi0YJkkHJfYxxn-ufg,36070
 biotite/structure/io/pdbx/component.py,sha256=MiVzeqTI9FHl8hbbpQkOGmlHyhtmwW4V18nQVcL-Quk,8649
-biotite/structure/io/pdbx/compress.py,sha256=r8Odnftx_k5CQgkpJ0tvfQkbQwTjaWVjWtyef4DtI7M,13668
-biotite/structure/io/pdbx/convert.py,sha256=QSv6O0sEE1XKrzqVQ_bjIKrziSGxOJzJCuBZKEQ1Ho0,81994
-biotite/structure/io/pdbx/encoding.pyx,sha256=mZHuUc9ScdwXlwSnCwD9UiUzArW8Dqf-9Yyu5xYms5w,33174
+biotite/structure/io/pdbx/compress.py,sha256=N3oHoysqLSEw2CKVFYEc_ZWXMfWYn_fejL2oI4xHgK4,13769
+biotite/structure/io/pdbx/convert.py,sha256=MSsO7iykSszhdu8Ex_UVGGGVpnaOWv5_XDuHrru4pTQ,82846
+biotite/structure/io/pdbx/encoding.pyx,sha256=72V1cGoz1bXvW9mA4qxJrnNFftSXQ4SkkqDyiNHWB8o,34686
 biotite/structure/io/trr/__init__.py,sha256=xp4FpuAy_ESqzVWyugRXUHZ0iF8j5ox6EfCxSWhkcUY,372
 biotite/structure/io/trr/file.py,sha256=XcdYOf9M2tjRXMM87p9U7jMdQb0PlTFvDHXHgSdjbl8,1278
 biotite/structure/io/xtc/__init__.py,sha256=P17UBQnG-KmOlScHp46FXAb5i7d-ZCMlyljcOkFolMw,370
 biotite/structure/io/xtc/file.py,sha256=X4iIDjAWn1ZySg3NjbPeSMNByoyH1y8asmtqcBYycpE,1278
-biotite/sequence/codec.cp312-win_amd64.pyd,sha256=Z5Dq2Bf3-i-nZCifXo0uPvRG2lXS0lICzlmyuYa9vRM,253952
-biotite/structure/bonds.cp312-win_amd64.pyd,sha256=Ovk87hETIE0LQTllnSacRp25LglDW-eDchIIpsBrCys,483328
-biotite/structure/celllist.cp312-win_amd64.pyd,sha256=Z-Kdlfri-k-crJ4DjxGCvUQ7sH2w7FmqaZ-zEnbjLy8,258560
-biotite/structure/charges.cp312-win_amd64.pyd,sha256=LV75UQLCRT5jAz9Tn-puV25IO4zZkKsfzi5dscl4v1s,215552
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