biotite 1.2.0__cp313-cp313-win_amd64.whl → 1.4.0__cp313-cp313-win_amd64.whl

{biotite-1.2.0.dist-info → biotite-1.4.0.dist-info}/RECORD

@@ -2,7 +2,7 @@ biotite/__init__.py,sha256=gzqOy5P7Zf667uYuUwqjLLW0GiBdqc23NLcZaXMuHKw,563
 biotite/copyable.py,sha256=Qnja44k58dAc3WkIUM0svqrbvqO9pSV-Atr9MUJSoCI,1968
 biotite/file.py,sha256=ktpRUk0OH5_wKIJHtCX3zDjXeJ3eQ4ycDjpp7HttUYM,6977
 biotite/setup_ccd.py,sha256=9StRz4qPVdTJNrPUoA_liwvkKnTb8O0U8PDxt1tDVwc,6248
-biotite/version.py,sha256=bkKCVnDOy6zWTEO3tQhqGU5jAs0SW1QnX5UfCnuEW3U,532
+biotite/version.py,sha256=mQpvfIn8roT-O8LS07P1pK-7O17jWuq_vL-TTh8VVvs,532
 biotite/visualize.py,sha256=z4lBfJAt5YxGqtgxgcLHKMwVcE4u6fqExEyrOHcSiaY,14330
 biotite/application/__init__.py,sha256=Rei3EwlpCnC_cJNQoTJYY_Gw_qLdsqgnRxV5b1slHJU,3148
 biotite/application/application.py,sha256=J9ydVvN_5C3nYuLl12EPBhM67i0GQm6MPy0F1K-jdgc,8372
@@ -31,7 +31,7 @@ biotite/application/tantan/app.py,sha256=nWE3rlDqf3-jfpIXUw1ddH4ooiD2lZ1GeqBvGXE
 biotite/application/viennarna/__init__.py,sha256=HlvHvgsTdzTbq3e9luAmMP-4DbkiBqx5ru69swdz4ns,491
 biotite/application/viennarna/rnaalifold.py,sha256=16arcCP55XC8OXNLkSLPNrMrHuU7b5VLyz0xqO_MDhI,10993
 biotite/application/viennarna/rnafold.py,sha256=skqZzqE-otS6uL38isGpikLUbwf8srsOQirINB6qi-8,8164
-biotite/application/viennarna/rnaplot.py,sha256=Y8-HLg27i9USuxKM2Xut2TFU8VR85Hd_eTEsMuDqRB4,6704
+biotite/application/viennarna/rnaplot.py,sha256=rIEFAdX_GhJkyDAG3CztxLnJZo8gy5-7yq7fGKqEPus,6572
 biotite/application/viennarna/util.py,sha256=lfssotSqZl4cO1ibgtgXgEFVzL9s1xMM-99wmuaD-wc,2712
 biotite/database/__init__.py,sha256=N3PuLKuEbQ0J55CddwryBGiLfYSazC697F8KnxizrKY,748
 biotite/database/error.py,sha256=L_FvDa-F4XUaCIVo6ZtLXIMn6P-cv783lvxR_Rtluqw,426
@@ -56,20 +56,20 @@ biotite/database/uniprot/check.py,sha256=cVF0UfiUCT2nZ1jLWVfs1Ygghzx30ZXy1yj2vvA
 biotite/database/uniprot/download.py,sha256=7hv050jxaeVQpmKiAEG_pRsyEtHbiTH-6Qc1VUsjBpk,4360
 biotite/database/uniprot/query.py,sha256=qvwvCF8ae3WZLrT-GNt-DppKAnwdHQ-3XF8TJfZ9N6A,7810
 biotite/interface/__init__.py,sha256=Mb4FPYW46Y6iduU8XVwWXUtgpsyVrk5gvM5xS2k1F40,736
-biotite/interface/version.py,sha256=e-hm-dr8ju9T5eNQYpaoPYEIUCbCx0avR-CoHlZln4I,2435
+biotite/interface/version.py,sha256=-w9vOmwj_OmK98zNNZgXSIt9J2vMAZvw55-O3LgEEiQ,3046
 biotite/interface/warning.py,sha256=3kwFPSEZMk8Q7yccD1Fsgu51gENA1ZbcsdNG_RBnrUM,596
-biotite/interface/openmm/__init__.py,sha256=_sFCuVdsc3CaMAKq55OvnUYFETqYpOrqyVNbJb4nBTA,521
+biotite/interface/openmm/__init__.py,sha256=lCD3SVZXBNKwDsriwFG1ala-mlxfz40GxsKSTlwmBUU,607
 biotite/interface/openmm/state.py,sha256=DuoheeVwF8FqLQmer2mRJ_gRjnbIOkOsJGMfd6ARFdk,2816
 biotite/interface/openmm/system.py,sha256=wIAlQQzJMfHJDSMIJ6CwScNgJ10DBFiBSLkR7BU4o3s,7245
-biotite/interface/pymol/__init__.py,sha256=nu7HLGrp9DF-iOCbt1oMn8-TeOnOn2CipkwPAXCQACA,6766
+biotite/interface/pymol/__init__.py,sha256=fL56vVJ0Ro-3aftoE3lBVRmwPRl2iHWhsnSEB5JQmK0,6849
 biotite/interface/pymol/cgo.py,sha256=naAQ-5R2wpsbXy3UkjkFvGkzRx8xVr53qlGpltyRO8I,10205
 biotite/interface/pymol/convert.py,sha256=mukBkBjGO0kv5Ec_ALG9i3BPYUCap1Zf1LiIJvBLrZw,6229
 biotite/interface/pymol/display.py,sha256=R8vgVRoByPr_mkhm81fJdtzyZCMzRj8jyfviNPAfTLU,8725
-biotite/interface/pymol/object.py,sha256=t_sT7lu1Vh_jC0uzzv7ydSf02jzeClT4tfiPN9fIMyY,45419
+biotite/interface/pymol/object.py,sha256=-eegu5qwye8_WE_89baCsk7nfqeHpQo50VoXPa4dCjA,45508
 biotite/interface/pymol/shapes.py,sha256=w0_fBczmPtI3tQrmrwOp8owg6WUfhX3qXhKXibtfwBA,6244
 biotite/interface/pymol/startup.py,sha256=vHdpd3RusQXJr9PSPbJxWbo8CuJSN4YpecNCM0az1Ak,4788
-biotite/interface/rdkit/__init__.py,sha256=HWKhHJY0bCKlDDj3g-Ey7sjis0tsan6aC7b_l8qB0GA,466
-biotite/interface/rdkit/mol.py,sha256=GH0iSrs54qNWSZbVjPw3T0hjJbTWkCFjTwpq8ef7XTI,20134
+biotite/interface/rdkit/__init__.py,sha256=0hPcE6j-HKorkcFq3thhx6k2BEjeo0bbwuCGTEqB5YI,551
+biotite/interface/rdkit/mol.py,sha256=EbNDkS0EqjJ6IxDIJHrAjMParbIDkfZpjjRY9R9L5M8,20119
 biotite/sequence/__init__.py,sha256=fUoOYLTavBTicHu-JCQkvrCAyRfKRspfCItufOBDGGE,3507
 biotite/sequence/alphabet.py,sha256=rI3KC_U05_gdLdXypGDicmJWvU2ruISMlCxr-NGPi0E,17782
 biotite/sequence/annotation.py,sha256=XeVjiagSR5aVIRywAIl927Iwdgni4VKj7SyQJjP9Wkw,30541
@@ -82,7 +82,7 @@ biotite/sequence/seqtypes.py,sha256=szRx8sKaLOTq1Lp8qtg7Ru4dd_3SALl2zBqw0DFzy5s,
 biotite/sequence/sequence.py,sha256=lWG4TjGLDjhBStQk-y3ECLjElch4korQ5BSAiGJ-X0Q,12064
 biotite/sequence/align/__init__.py,sha256=ncVKWSjBtX6mjeikahsOXheqnlh9bT4mAzwkcMPYMWU,4910
 biotite/sequence/align/alignment.py,sha256=YSQCSXaUJ-q78RP3NAAsBhQ04aDtWRZxdjKNJD7on3o,23082
-biotite/sequence/align/banded.pyx,sha256=Td2d38XuNUzPK0X--Zo_GiogjdY2LntmvAA_ZhQhcwA,25951
+biotite/sequence/align/banded.pyx,sha256=cy1ZhBpQcZSyZGLhPYGa8HKce_u58mfnHHyk18ZTBkQ,25934
 biotite/sequence/align/buckets.py,sha256=3QLzBDorc0ZYJv2SNuRn-mWmT3I2XljfCD1AoNV3ldw,2535
 biotite/sequence/align/cigar.py,sha256=5Q7TU4jVsCsk1gbyVtwiX3ugvqN90WRGqhl0UCNteec,14760
 biotite/sequence/align/kmeralphabet.pyx,sha256=CW2EymGklsnL_REWTdGx_r2pe0fNwdDmfjmSqf-IfiY,19231
@@ -91,8 +91,8 @@ biotite/sequence/align/kmertable.pyx,sha256=NM0ja9hxigllGNu4_8lrnUwYRi58EUDoHTun
 biotite/sequence/align/localgapped.pyx,sha256=4rYWmMe_6fxmnAK-7mN3cV6dTy3xirWG4T65a7iayWk,33998
 biotite/sequence/align/localungapped.pyx,sha256=2cRRgd4cbgClyzEV_PJJf5FUp8XqXjk4P0tAkbIuEKM,9938
 biotite/sequence/align/matrix.py,sha256=IXh2nM_nmClLQ_qRiT1cQWGhFAJuPUDHzbzWVxcV6qY,22991
-biotite/sequence/align/multiple.pyx,sha256=J9MLWqzSvJN-1eWsjCPGlCdr51cSYkkiwyjyyE46qFo,22585
-biotite/sequence/align/pairwise.pyx,sha256=ekSxD8zMK8lbSZGAxZAPe_bo339Me6ON4lTvzM-jn9I,23266
+biotite/sequence/align/multiple.pyx,sha256=hJbBCmZreDm06f4o-GH_poUEOPZ_VBPtwlSnqlGLvZ8,22543
+biotite/sequence/align/pairwise.pyx,sha256=2eqiJFopGk6XXtE6-UX04lTEG0T-VcHrm6dDUiA9HM0,23182
 biotite/sequence/align/permutation.pyx,sha256=G9quD4yyP_5BCgVkJE_Xf_9wovn1Bg_MXPtltopaUYw,10340
 biotite/sequence/align/primes.txt,sha256=XcNX2_hYQI4H-8MPvZH1oiYeQ1lfxU8rBvuwMlcQa3Y,10961
 biotite/sequence/align/selector.pyx,sha256=YQB2rASzwMa_7bAGV_mPa828MIvrVQMuVObCAlW4B34,34425
@@ -240,34 +240,36 @@ biotite/sequence/phylo/tree.pyx,sha256=kmT2kO9cH3svQOxsyuPLfbUsWnTNdfVrx5xaxcmTC
 biotite/sequence/phylo/upgma.pyx,sha256=llgc-9fEOU-D1a-ESMSIAoPjHvsd_L0-GnwkL-uzWNc,5376
 biotite/structure/__init__.py,sha256=nTlutppQQCPYYPH0MXB104--L70rOPUj6P8CcRDyUKA,5623
 biotite/structure/atoms.py,sha256=x6SnfqCTZIWWReEh62YDUTF3sPjjJKkldDYqu2XigDk,52406
-biotite/structure/basepairs.py,sha256=-Jvzj9rOxy0ojTF0EEFtQRbS1S9hdg0Rc-xwY1Nhi2M,51417
-biotite/structure/bonds.pyx,sha256=mFJxrbNtGDHQWdSD5KwEJgGsIsfZBo8B18C4DvknYvo,71734
-biotite/structure/box.py,sha256=sBljPGIoBg27PHb2v1r6lsEfJejTmieOI6zAbKt6Fog,19336
-biotite/structure/celllist.pyx,sha256=7U5gEO99xp0pd07ZeMtlY77j_5wU-9e9la0tIR8wB1k,35453
-biotite/structure/chains.py,sha256=ybGE1OaLH3eEe9VwKmVfa5tF0UMtmma0dh8yQjxz2S4,8766
+biotite/structure/basepairs.py,sha256=4IfbB0yE7-a1cGnMmYwpCu53zVBiJBOyGJ-TxzzigmY,51311
+biotite/structure/bonds.pyx,sha256=b3MKKo_ttNUNfoDCCaxrYKNhpNgwOcPdGe2pd-ZrreA,73827
+biotite/structure/box.py,sha256=8JjPHYdc0_SQsMSb6i05GmghW8O0KQZ20ZrSgtKYuXo,24120
+biotite/structure/celllist.pyx,sha256=tZXwbuN1QACGG2lHiA71ZMtfcdcvypoxCyRdodKFvyU,35427
+biotite/structure/chains.py,sha256=Xv9VwUQbko6Yg7zCqwNAUCm7x6qTciQ0NqUUSRYmswo,8600
 biotite/structure/charges.pyx,sha256=ZqQeMaSr0kjgBWRN_mYWBXV6wYtglADRrvY4ZQ0KKSU,19341
-biotite/structure/compare.py,sha256=h6v6pAVxLiDKzeEbFltI9OuLtVBNVCAmFU7m8whFcKE,28034
+biotite/structure/compare.py,sha256=Sy9xVcDY0sELBHcVfvXV9fn6OawgUjGGyKOTnWwavqM,28120
 biotite/structure/density.py,sha256=bCRVos_1LF2Uqq8fmVnZNhRUdDupdTXgPem-bkca24s,4306
-biotite/structure/dotbracket.py,sha256=tzSvOB9mWErIIg9dcXY9wz-gha6MxQ_zESyPm18fmRg,7475
+biotite/structure/dotbracket.py,sha256=1aOy386N6H666YK_vVaE1Ed28Xx9-OlW9jWLI51v0U4,7411
 biotite/structure/error.py,sha256=NaQBi7CGUYpa7-Y9t0We8iVEJwqpsNWLXkr1PTBKlxQ,822
 biotite/structure/filter.py,sha256=Iw5G6Qa53D6ZA-XH0fLY-vosl6AZHMJtmIvs4hcHc94,18585
 biotite/structure/geometry.py,sha256=vAMYYyTU-wrhx5twVYLrtan0UEdLmG-C-opuTZjhHjM,24331
-biotite/structure/hbond.py,sha256=0DoqTzLHq529OOViZIhIAl0OiEHCDVJyTmCDa3ZKRQA,15645
+biotite/structure/hbond.py,sha256=prj1l763yMQGPWL41HoLtSpiDveHoMVP7dlUNYO9pjE,15617
 biotite/structure/integrity.py,sha256=v1lJrEcvH_bdV0-5ToIKBPWKV5Mq-TDSlSFZgRjn614,6976
 biotite/structure/mechanics.py,sha256=hg1wre3uPAuXfyZ976mryvd0_Db1UE-iTLE9qjfwijw,2659
 biotite/structure/molecules.py,sha256=VdfD4w5cbbT4_qQdNHYgIjqwQSvaS-SbfNE5ytNCBqI,15628
-biotite/structure/pseudoknots.py,sha256=OXofcx8-ePheFQ5du9ZGKRxEAzZAco01nw7X70_Yk3c,22789
+biotite/structure/pseudoknots.py,sha256=8kknr_m4eUsVdJUe2gPRofWkWP9NYgOU-NAmJw2oPEc,22716
 biotite/structure/rdf.py,sha256=XAkbnbfk0wx_cIlrDYXBMUzzShgICUCpyPPfTNviWBQ,8349
 biotite/structure/repair.py,sha256=MqWQTIOH67giGQ-_yRFARa0uqNFRHHOb-PwSBkdzUL4,7298
-biotite/structure/residues.py,sha256=hiCCLRmowlAm6C24f7gwvhVoZLSzD_z8DKxuwPD30bQ,22898
-biotite/structure/rings.py,sha256=ei1suKE53QGP5XvEPeO8tDGvbYkkI5f6Mn-Hi0rmOcw,11781
-biotite/structure/sasa.pyx,sha256=L3cpqVZBG8RbtP-JLn9R39FszvnomwozvSf6ReAiy1o,13432
-biotite/structure/segments.py,sha256=crDed1Lv4DaCOETw8qM75LXfjLVTCtlBKKRiFdCcobY,7833
+biotite/structure/residues.py,sha256=3g3b1SBh-euil6wKg-WSNJWwhhsUp2BUAI68-Yhgu14,22378
+biotite/structure/rings.py,sha256=XF4wH_nCIswVgtC22gF81nxDvwyWO2gRKtNLoJgxiIs,16035
+biotite/structure/sasa.pyx,sha256=Vp-WbGMa2HduTf9KDOoR4IQnarUGemVqjVyn_PbFGhU,13239
+biotite/structure/segments.py,sha256=ZfU1WtimhcvXy0tWv7AYbW1wis04_DtxC4Eal2u2JrM,10033
 biotite/structure/sequence.py,sha256=RFayTEC85_ETGq0mQVX0gy3tZU6-dTQStyReVzauTqU,4355
+biotite/structure/spacegroups.json,sha256=C3O--eJKKKOScmCyqPAElFh-qTlMN5f4EkzxWfhaigs,53125
+biotite/structure/spacegroups.license,sha256=-9GpM4nLKzKQgPXGf1PNUXhCM8CQUm79QWFA40KG_aY,1323
 biotite/structure/sse.py,sha256=Th5LBvwV6x94d1vbBdxFnKGBqaPxDkTit9qNgeFBC78,11710
-biotite/structure/superimpose.py,sha256=8XfPyHfbU943lB4YcBZ9ZRWGXj_8ZQTc52jGQz8WcjQ,26598
+biotite/structure/superimpose.py,sha256=cE2Q3E0YXzYh6KDhYcBbBi2O1c1O2ZIPUbBlGNEvh2Q,20073
 biotite/structure/tm.py,sha256=dzLLD3GYPFsVgXgND8-fZT2Y3pp0FDA6S_Z8QJUr9S0,21548
-biotite/structure/transform.py,sha256=NHY9enchMmEvnJzRp-CUqgWFmYMXjwda3zdniMRoQnI,20200
+biotite/structure/transform.py,sha256=WZ6fysoP2OR-tpJxSjNmCkUVqdBwCCnCYRyWa4hPP1k,27711
 biotite/structure/util.py,sha256=7X_h7YYzwXLYc2XjFR-BQPAosNCqdZnxbbfonyO-NGA,5127
 biotite/structure/alphabet/__init__.py,sha256=UxJZ1_WsI1SPs89ZGv4Xmr-n0pWwlQcBBglfJEXzanY,953
 biotite/structure/alphabet/encoder.py,sha256=OMQXiMo6xnhIsWoCZ2xKvGpV28k24lM8LhL9cZDDFNE,11715
@@ -279,13 +281,13 @@ biotite/structure/alphabet/pb.py,sha256=n9EyAgWLZ055CMFhQwc_t1xvG4KJ6lTMGwh_3H1U
 biotite/structure/alphabet/unkerasify.py,sha256=YjuM8molBvuhfhGAAF5L-zo8agC2S3WLTDWMdARn_7Y,3429
 biotite/structure/graphics/__init__.py,sha256=crwq14wVv4ttDEecmExvEyh5Z1LCafb3wznZWB7HOhA,366
 biotite/structure/graphics/atoms.py,sha256=acZXrWVRblk83FfLePe3pHoMcjJJH2eEDyZFmqmw-xs,8359
-biotite/structure/graphics/rna.py,sha256=7PSX9JHfo1840k8HqKcC8UXX-rxP8YwFtN_VLgUilbE,12311
+biotite/structure/graphics/rna.py,sha256=g3Rxzz2nCFXKv6IXCuKd9nnN57SI5WZtAcjzxRAhHtw,12140
 biotite/structure/info/__init__.py,sha256=D1ure7j8lAfbLGqQricxHLuiDHf0FLzV_p4m5rd0dPQ,722
 biotite/structure/info/atom_masses.json,sha256=DJ2YMCN4Fvn0zzT91N6TotoLMPm_EkeOF23Yjb5mvGg,2504
 biotite/structure/info/atoms.py,sha256=rBmzMqUffYmKuQVVHFEz-SaaFSrsRSLFoMwa8dzYYZg,3100
 biotite/structure/info/bonds.py,sha256=7qp4EYo61x6j7OK9Eyolh7Pmg4PU8Rodr5_KfmnyzP8,4793
 biotite/structure/info/ccd.py,sha256=o0Jb7YYJbYpyljfNGiqXF6bXP7IUlCY3cRMQj1EyWvg,6051
-biotite/structure/info/components.bcif,sha256=ClKq5vYpizeAB7JSaz-ZnZ_rby7mVVn3MS5bv8muoqU,59077222
+biotite/structure/info/components.bcif,sha256=y9ysqudHo8BQmtqI5JEMnEFXQtG1yt1X9WBtyw8yD2Y,60736935
 biotite/structure/info/groups.py,sha256=0NTOaFgvqf-yWTMNiZguVx6i0sVWXB-AhnPyhuRcK5o,3312
 biotite/structure/info/masses.py,sha256=s8heq0bG33-6NTeRqA2WpoOqUy-mwQTfM5a7CWA0YE0,4676
 biotite/structure/info/misc.py,sha256=_-TSbBsZ70fv3Kcwa-28LTOOZpLJZkHE23XjvysLdF4,3565
@@ -308,45 +310,45 @@ biotite/structure/io/mol/sdf.py,sha256=yV0ROsMsMAN0Y6rgLSri4KVsHwxoBrln4ANldqihM
 biotite/structure/io/netcdf/__init__.py,sha256=BVUimn1EklpgdoCFE5sC-H4E47exDe_xIviMeGnn_tk,363
 biotite/structure/io/netcdf/file.py,sha256=8jht6qCgw0Q7q1-WaQ1iCBjc1QLzjrwpppe3uBZhZ1Y,2256
 biotite/structure/io/pdb/__init__.py,sha256=UqePAxP48oww8SEexxr6JlugRua8wgOryAvxmHd58f4,753
-biotite/structure/io/pdb/convert.py,sha256=AP4PPNvZ_SMjH1afal8jGzMGYyim_wTZNLbG9gOBNlo,11026
-biotite/structure/io/pdb/file.py,sha256=V3I1kH2dFj9uiOjCxcnan5wAStGw_vLt5xFWNJziwg8,51633
+biotite/structure/io/pdb/convert.py,sha256=EN9-10tp_ZZ199lhJNHMUA7jp1IO0FfRaxRHD20wSNw,14188
+biotite/structure/io/pdb/file.py,sha256=TsOj8f3L6PgoRpYer3QAlWUCxiExtSLmU3VDd5B8iaE,55451
 biotite/structure/io/pdb/hybrid36.pyx,sha256=-feGX_k9H7uAfbqmy37PvlWbuij-mknpbCR2ot1l4kk,8277
 biotite/structure/io/pdbqt/__init__.py,sha256=JiBnbhNHevtmVIwEeYBubOzK5xu1d9dSny7Zf3Aas74,456
 biotite/structure/io/pdbqt/convert.py,sha256=M2SytCYO2ihvpcUQCqz4PD4DAKwCPxcjGbhFhJjbDZY,4121
 biotite/structure/io/pdbqt/file.py,sha256=Jl4DiewnIGd9UeVruhTxkZaclIW94aYpMDBHB37PVtc,27326
 biotite/structure/io/pdbx/__init__.py,sha256=0G68Qdc29KdXt0R9di2uBv4r173kuXXqGCbMtDdth0E,740
-biotite/structure/io/pdbx/bcif.py,sha256=cpl55pbDDlQKWZDkTZsgMDZKWv303AvedV3-n5Y05OA,21808
-biotite/structure/io/pdbx/cif.py,sha256=7jaC3DueZ0m738nFGYfkMkseXDiMhiBKWF0Gx_fk6AI,35956
+biotite/structure/io/pdbx/bcif.py,sha256=RP9WdnD2nmqiDarNyjOm9FgnEbnLY1Yvm-DM8DyCykk,21921
+biotite/structure/io/pdbx/cif.py,sha256=wnFthOoyIugjAUoYVddaP_1lSEbnWNf5NM564fMFER4,36069
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@@ -1,4 +1,4 @@
 Wheel-Version: 1.0
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+Generator: hatchling 1.27.0
 Root-Is-Purelib: false
 Tag: cp313-cp313-win_amd64