biotite 0.40.0__cp310-cp310-win_amd64.whl → 0.41.0__cp310-cp310-win_amd64.whl

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Files changed (90) hide show
  1. biotite/__init__.py +1 -1
  2. biotite/database/pubchem/download.py +23 -23
  3. biotite/database/pubchem/query.py +7 -7
  4. biotite/file.py +17 -9
  5. biotite/sequence/align/banded.c +119 -119
  6. biotite/sequence/align/banded.cp310-win_amd64.pyd +0 -0
  7. biotite/sequence/align/cigar.py +60 -15
  8. biotite/sequence/align/kmeralphabet.c +119 -119
  9. biotite/sequence/align/kmeralphabet.cp310-win_amd64.pyd +0 -0
  10. biotite/sequence/align/kmersimilarity.c +119 -119
  11. biotite/sequence/align/kmersimilarity.cp310-win_amd64.pyd +0 -0
  12. biotite/sequence/align/kmertable.cp310-win_amd64.pyd +0 -0
  13. biotite/sequence/align/kmertable.cpp +119 -119
  14. biotite/sequence/align/localgapped.c +119 -119
  15. biotite/sequence/align/localgapped.cp310-win_amd64.pyd +0 -0
  16. biotite/sequence/align/localungapped.c +119 -119
  17. biotite/sequence/align/localungapped.cp310-win_amd64.pyd +0 -0
  18. biotite/sequence/align/multiple.c +119 -119
  19. biotite/sequence/align/multiple.cp310-win_amd64.pyd +0 -0
  20. biotite/sequence/align/pairwise.c +119 -119
  21. biotite/sequence/align/pairwise.cp310-win_amd64.pyd +0 -0
  22. biotite/sequence/align/permutation.c +119 -119
  23. biotite/sequence/align/permutation.cp310-win_amd64.pyd +0 -0
  24. biotite/sequence/align/selector.c +119 -119
  25. biotite/sequence/align/selector.cp310-win_amd64.pyd +0 -0
  26. biotite/sequence/align/tracetable.c +119 -119
  27. biotite/sequence/align/tracetable.cp310-win_amd64.pyd +0 -0
  28. biotite/sequence/annotation.py +2 -2
  29. biotite/sequence/codec.c +119 -119
  30. biotite/sequence/codec.cp310-win_amd64.pyd +0 -0
  31. biotite/sequence/io/fasta/convert.py +27 -24
  32. biotite/sequence/phylo/nj.c +119 -119
  33. biotite/sequence/phylo/nj.cp310-win_amd64.pyd +0 -0
  34. biotite/sequence/phylo/tree.c +119 -119
  35. biotite/sequence/phylo/tree.cp310-win_amd64.pyd +0 -0
  36. biotite/sequence/phylo/upgma.c +119 -119
  37. biotite/sequence/phylo/upgma.cp310-win_amd64.pyd +0 -0
  38. biotite/structure/__init__.py +2 -0
  39. biotite/structure/bonds.c +1124 -915
  40. biotite/structure/bonds.cp310-win_amd64.pyd +0 -0
  41. biotite/structure/celllist.c +119 -119
  42. biotite/structure/celllist.cp310-win_amd64.pyd +0 -0
  43. biotite/structure/charges.c +119 -119
  44. biotite/structure/charges.cp310-win_amd64.pyd +0 -0
  45. biotite/structure/dotbracket.py +2 -0
  46. biotite/structure/info/atoms.py +6 -1
  47. biotite/structure/info/bonds.py +1 -1
  48. biotite/structure/info/ccd/amino_acids.txt +17 -0
  49. biotite/structure/info/ccd/carbohydrates.txt +2 -0
  50. biotite/structure/info/ccd/components.bcif +0 -0
  51. biotite/structure/info/ccd/nucleotides.txt +1 -0
  52. biotite/structure/info/misc.py +69 -5
  53. biotite/structure/integrity.py +19 -70
  54. biotite/structure/io/ctab.py +12 -106
  55. biotite/structure/io/general.py +157 -165
  56. biotite/structure/io/gro/file.py +16 -16
  57. biotite/structure/io/mmtf/convertarray.c +119 -119
  58. biotite/structure/io/mmtf/convertarray.cp310-win_amd64.pyd +0 -0
  59. biotite/structure/io/mmtf/convertfile.c +119 -119
  60. biotite/structure/io/mmtf/convertfile.cp310-win_amd64.pyd +0 -0
  61. biotite/structure/io/mmtf/decode.c +119 -119
  62. biotite/structure/io/mmtf/decode.cp310-win_amd64.pyd +0 -0
  63. biotite/structure/io/mmtf/encode.c +119 -119
  64. biotite/structure/io/mmtf/encode.cp310-win_amd64.pyd +0 -0
  65. biotite/structure/io/mol/__init__.py +4 -2
  66. biotite/structure/io/mol/convert.py +71 -7
  67. biotite/structure/io/mol/ctab.py +414 -0
  68. biotite/structure/io/mol/header.py +116 -0
  69. biotite/structure/io/mol/{file.py → mol.py} +69 -82
  70. biotite/structure/io/mol/sdf.py +909 -0
  71. biotite/structure/io/pdb/file.py +84 -31
  72. biotite/structure/io/pdb/hybrid36.cp310-win_amd64.pyd +0 -0
  73. biotite/structure/io/pdbx/__init__.py +0 -1
  74. biotite/structure/io/pdbx/bcif.py +2 -3
  75. biotite/structure/io/pdbx/cif.py +9 -5
  76. biotite/structure/io/pdbx/component.py +4 -1
  77. biotite/structure/io/pdbx/convert.py +203 -79
  78. biotite/structure/io/pdbx/encoding.c +119 -119
  79. biotite/structure/io/pdbx/encoding.cp310-win_amd64.pyd +0 -0
  80. biotite/structure/repair.py +253 -0
  81. biotite/structure/sasa.c +119 -119
  82. biotite/structure/sasa.cp310-win_amd64.pyd +0 -0
  83. biotite/structure/sequence.py +112 -0
  84. biotite/structure/superimpose.py +472 -13
  85. {biotite-0.40.0.dist-info → biotite-0.41.0.dist-info}/METADATA +2 -2
  86. {biotite-0.40.0.dist-info → biotite-0.41.0.dist-info}/RECORD +89 -85
  87. biotite/structure/io/pdbx/error.py +0 -14
  88. {biotite-0.40.0.dist-info → biotite-0.41.0.dist-info}/LICENSE.rst +0 -0
  89. {biotite-0.40.0.dist-info → biotite-0.41.0.dist-info}/WHEEL +0 -0
  90. {biotite-0.40.0.dist-info → biotite-0.41.0.dist-info}/top_level.txt +0 -0
@@ -1,6 +1,6 @@
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- biotite/__init__.py,sha256=idLYRVttRoHGTws624jHvtwxXEg0zyjQek4xaHbip1s,541
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+ biotite/__init__.py,sha256=Ik4G4g6cxAnWqDNPfy8RfXVnO39z1jyD5QxOXwNKXng,541
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  biotite/copyable.py,sha256=bS6JvqiG2G-8Kav7hzJb2mhO0mSpgjFvm_LD_t9dTLA,2042
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- biotite/file.py,sha256=M7FlQdNOUjDOBjkLMrzPq-xljwEFe93jFCLrFV6rprw,7578
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+ biotite/file.py,sha256=Hu4NPQOgTtgt10fgRSOaD92Ur2rBMUUBW-fOniFUsJw,7680
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  biotite/temp.py,sha256=zROAfIdwaqso8_cvpVkCM37LNtzpke-XIoidHZkDnuY,2130
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  biotite/visualize.py,sha256=yuQJEwZhfbXPR8tWKUywusP1puFlLc_DAbctY_nCrhM,10092
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  biotite/application/__init__.py,sha256=k1y1IgbK_vZJdHbQt4cgNgR1auc-riGcjrb5rkhyQuQ,1778
@@ -41,9 +41,9 @@ biotite/database/entrez/download.py,sha256=Ieqx9Rx_A36RZiEMzuY1pw8CXEnofHguLQ9qR
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  biotite/database/entrez/key.py,sha256=XSaqJT7IhbGI1UUZNmgbu0elKJ9KWRvxHhOS6aw8QhI,1154
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  biotite/database/entrez/query.py,sha256=n55TM0yhJVhywTA60o159_GDrnff3kfxXrS5MbrE76o,7245
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  biotite/database/pubchem/__init__.py,sha256=pTsYwm9pQYHTVFmkVJC0qZkN0cxl21ZwT5KqIR_qpuQ,688
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- biotite/database/pubchem/download.py,sha256=6BC3p9lM6dF-AXc34LlkrI04AgUQAT_ZAG1b8jutLks,10377
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+ biotite/database/pubchem/download.py,sha256=Y15plkcYOJCJOY7-kxGd_xoFs7xEscDLzj-INkFggxM,10257
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  biotite/database/pubchem/error.py,sha256=rC91vT5WHPwdanldwLMJWUrYkdFDCZkjCiEHy_WpDZc,730
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- biotite/database/pubchem/query.py,sha256=JhmrlulVF0FAFf92fmCipXkMALqTZgv9EV93pDcDxvs,27267
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+ biotite/database/pubchem/query.py,sha256=1yvLR_wYtT-1ywij7wW8JIM7ohj2qO8ux7flu4PLOVY,27252
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  biotite/database/pubchem/throttle.py,sha256=GK-x6_zV7gJ3gUyxEUSbO8YbT5J6Oj3XIB5zs5ZoU1c,3643
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  biotite/database/rcsb/__init__.py,sha256=qb0x-Z4npqOyGi5nY5A-66xXb7woPSy1M2d_jVadRj4,343
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  biotite/database/rcsb/download.py,sha256=ZlbYbAvCsri4NnpDvaLeCSTJUSlz6etQOExd_301rN0,6163
@@ -54,9 +54,9 @@ biotite/database/uniprot/download.py,sha256=MGxeS3DwSIn8WUur1-hOFEKgr4tgKZLmDdTc
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  biotite/database/uniprot/query.py,sha256=283jqn5qr_Lfsi5oUQ-LkK5Cutauy8kDih26rZdkEzg,7099
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  biotite/sequence/__init__.py,sha256=K2I_Ds-pEmY25pEbzrIKCUMt9De2pPOG-hoMfsxn8nQ,3106
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  biotite/sequence/alphabet.py,sha256=-f1p9hVGEgFbjawce2J3Ybug5VY2hkZiN3gPujeYStU,18350
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- biotite/sequence/annotation.py,sha256=fuhMCjQ_MBkVyTyx4nU_VaGRgVr-u448KZ2G8Q_CVgY,30615
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- biotite/sequence/codec.c,sha256=TX2bbUqLt28sgh1oQquA0acXGgeFkz4f-VQvWKD1S2I,1529118
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- biotite/sequence/codec.cp310-win_amd64.pyd,sha256=h7oARp3vwwrixgUI8aa0RVVMMtLTn5J81j6AtSwouzA,240640
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+ biotite/sequence/annotation.py,sha256=U1-vAsQvF02eazhEE0qqujBSkTv1_jiPrjSkoU8LY88,30575
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+ biotite/sequence/codec.c,sha256=LHBLZOW1dRLTy8memGu5ZHSOztUtHd8EX0sq_A9iEfo,1529118
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+ biotite/sequence/codec.cp310-win_amd64.pyd,sha256=pDZ_YFks354WG77p3_rJOCh_9lsmMcFmpBSSChqxIoA,240640
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  biotite/sequence/codon.py,sha256=g3CfUkCbzm0kwDf0jsQdOk0RBKU9B4HvJEq5bCqTvRc,16921
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  biotite/sequence/profile.py,sha256=a455N4r1ua9e5tDZIp8u014ELxZE-Sxw_IUeCuqjgrQ,17269
@@ -65,33 +65,33 @@ biotite/sequence/seqtypes.py,sha256=NjBXwpTer2PhcEwngpWBYwYwR6yj3N_7JTILIoG3UNM,
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- biotite/sequence/align/banded.c,sha256=ffyObiHOIyLgDs14EcMGiyBW8wAdkOu45-WWAHqGHms,2578665
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- biotite/sequence/align/banded.cp310-win_amd64.pyd,sha256=Abe1tcBXdCq-Nph7mKqyeUZXnGlS9qjA9ABp_hJg_4I,489472
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+ biotite/sequence/align/banded.c,sha256=TV_JaielQcl9bfDwpw65UK61rAeI5E_3qn7gdU_WqvA,2578665
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+ biotite/sequence/align/banded.cp310-win_amd64.pyd,sha256=-aeg65CxQ6Utfn6Od-hQexeU3oSLAX5Q18RNQmkSox0,489472
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- biotite/sequence/align/cigar.py,sha256=jx5Str7TTIfRPZwvIk-JLE8_cueVMoobokAweq5TUv4,13303
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- biotite/sequence/align/kmeralphabet.c,sha256=F7ZQtWEjwBkzZ99bveM3066zHpYXberihRrzJnCvD3Y,1912880
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- biotite/sequence/align/kmeralphabet.cp310-win_amd64.pyd,sha256=iZNk-EhkMhhaSHhnhS3KDeJEBum64qdLz4dR_S4FbBI,307712
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- biotite/sequence/align/kmersimilarity.c,sha256=kaGmq6Ld6EEfXaiDoTfVwGlu1un0yyKopO8yPibht3E,1252717
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- biotite/sequence/align/kmersimilarity.cp310-win_amd64.pyd,sha256=bJirV4rjiYDx_NHUCzkIZgzWdcR48f9hnaxfdhI9Efg,172032
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- biotite/sequence/align/kmertable.cp310-win_amd64.pyd,sha256=X2qzSiBZuIJoMi8xurK_t00Vxw3AeCoEkO5ltUPga2c,597504
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- biotite/sequence/align/kmertable.cpp,sha256=WnI_WouD5DBJLnW7sTRe-8Xjn-kreHwezTTTKeDlc14,3030299
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- biotite/sequence/align/localgapped.c,sha256=7QozhJ-n9UN1MBdg5TFYKSnjIYAgPCijPJVvbGKNnrY,4599727
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- biotite/sequence/align/localgapped.cp310-win_amd64.pyd,sha256=bjTkW3CJYuSH6aDm6lFQLXXFiK7yRL23KO6YGDDEA2w,987648
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- biotite/sequence/align/localungapped.c,sha256=cX8gvph5tLdgeSGphNAnCotFS7GenEPbd5oci30kY5U,1605971
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- biotite/sequence/align/localungapped.cp310-win_amd64.pyd,sha256=MbhqERI5kLnDML5wqbKv2C92l-kpMp07aZyMnXE9ZDA,253952
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+ biotite/sequence/align/cigar.py,sha256=HNVubK3eESGrlYX40Ks80KHVIniKxhLofsts5PVcgJg,15080
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+ biotite/sequence/align/kmeralphabet.c,sha256=7izlD8MlQjdWo2jmsA2H0MnpL2G8YlJ19X73PDvmwS0,1912880
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+ biotite/sequence/align/kmeralphabet.cp310-win_amd64.pyd,sha256=k951Ba7kEbTXo72VmHbfHd5hDr5v6AftKE-A4ImQJTc,307712
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+ biotite/sequence/align/kmersimilarity.c,sha256=2tXhAz63o1RIVuSVvTGlHCk9dLECUXkGwEKVUIiKB-o,1252717
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+ biotite/sequence/align/kmersimilarity.cp310-win_amd64.pyd,sha256=-BJKCYtkfF82N-c8ocNIPAfgPea-r3QfKolkNaYKBcM,172032
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+ biotite/sequence/align/kmertable.cp310-win_amd64.pyd,sha256=c3kchSGLmxEKqq7LCx959W_6Nwb5uUzgwpi6Uh9_-L0,597504
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+ biotite/sequence/align/kmertable.cpp,sha256=bZVPT5Jq7FeaxQ2gzKYDRBtLuIKzqJCtEh8PGuDnqDo,3030299
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+ biotite/sequence/align/localgapped.c,sha256=RkTOtKSJ63121eJIjVi99el5PxZtubZVhnjIDIT_TPQ,4599727
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+ biotite/sequence/align/localgapped.cp310-win_amd64.pyd,sha256=Bw1ZlUKJAwmT-AswXHvfNBS2tWt-2bj2kO-rqedYClk,987648
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+ biotite/sequence/align/localungapped.c,sha256=Ow-G4kV8pg5GVwaQ3cBObDBifj7HKx7CCXjw4fH5Uvs,1605971
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+ biotite/sequence/align/localungapped.cp310-win_amd64.pyd,sha256=5nKsBf7zWou3dNYotAMWg1dI2RmDsP_FYm6wiZOKdVA,253952
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- biotite/sequence/align/multiple.c,sha256=HD1i2LD91HYXZGNY6Z5bGqoxikDfaFp8nOfSYDoBXTc,2275188
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- biotite/sequence/align/multiple.cp310-win_amd64.pyd,sha256=ai52uJsy2GNiip1cti033mP539_5Gca833kdwpz4OMQ,404480
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- biotite/sequence/align/pairwise.c,sha256=hYgeF4T5xxjWKATlijBE2i3kfznLiehmqf8ALlEoqC0,2882781
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- biotite/sequence/align/pairwise.cp310-win_amd64.pyd,sha256=Fq0_UlOvDRchC2W7kJuj42lI_nm2Anu0rTD8qGIu1DY,533504
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- biotite/sequence/align/permutation.c,sha256=5fFTfT8WxwPgvCYcAg50QnQNe1g0Lcs58hgvZGR4PC4,1278890
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- biotite/sequence/align/permutation.cp310-win_amd64.pyd,sha256=D-c0R2wURZZXP7xMVMVryzZ6_uk2X1Zh4BYU0BnB-fs,180224
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+ biotite/sequence/align/multiple.c,sha256=OgT9PbtR2uG_1xjBgaTrdyL-bUwWy3ASXwYApzy65tg,2275188
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+ biotite/sequence/align/multiple.cp310-win_amd64.pyd,sha256=og0xqMaWSdICgh8Ddp6pRhbdQHKEQ8Qb8c118NlSbfE,404480
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+ biotite/sequence/align/pairwise.c,sha256=G4714JfJCcqTbGhxKIT6AYB9hWYTgZiTRd6iU7psY00,2882781
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+ biotite/sequence/align/pairwise.cp310-win_amd64.pyd,sha256=AzSjwgkbiYxfPQol2DGPjg_Jg4SYDc2Zf3Yc8CAkzv8,533504
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+ biotite/sequence/align/permutation.c,sha256=KzBfYAi3hDtOjDscYTWJFUrvPQmnbkYGi39hKJ0llUc,1278890
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+ biotite/sequence/align/permutation.cp310-win_amd64.pyd,sha256=7MiaQNTuvIs8N4It79oOmfL1uihfWSrU7goDg-xZaRQ,180224
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- biotite/sequence/align/selector.c,sha256=7LtjdMFy7kNF_mo6VcmuvO8_A56yJc1Nn-pED99bk8E,1632745
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+ biotite/sequence/align/selector.c,sha256=9-PUCQbBq0bufsChu1FtWm6gL9bjNnZmc7wAQbVB-Wc,1632745
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- biotite/sequence/align/tracetable.c,sha256=CeMU6xA65JBk-5otFkYa9TRZqq8ohU-S4WLXdBUQwDI,1219044
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- biotite/sequence/align/tracetable.cp310-win_amd64.pyd,sha256=yVETDnXSuGAXieXdquhKcxL9PMU14Kra7gB8NE2FENY,145408
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+ biotite/sequence/align/tracetable.c,sha256=oXYaWtjlc0fLVN9mfzDp-N56auff64gve_0newqP9LQ,1219044
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+ biotite/sequence/align/tracetable.cp310-win_amd64.pyd,sha256=mAEkt_I9KY5tzeIc1Wa1UKCt34yz4m_Cjuhdc-lIewQ,145408
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@@ -210,7 +210,7 @@ biotite/sequence/graphics/color_schemes/wither.json,sha256=SawwzITBHvhS4XYf6CkND
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- biotite/sequence/io/fasta/convert.py,sha256=9A1J5rbKWVuuS1eVwyxaE3q3VYHKkwVxuaJlpNi-Ow0,9720
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+ biotite/sequence/phylo/upgma.c,sha256=Jw7o-AWM1tUUAIU-wvNiCN-BTGqGXkNnc7SwhyiRK6A,1168702
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+ biotite/structure/repair.py,sha256=kFI6NZ4HheXofPWN6_6GJPq-zo82GVruvhDK3SiH9Q0,7988
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+ biotite/structure/sasa.c,sha256=TU_jVDjUsbQtXzH-h72lxwFCt6WztHEiD1gDg9zcAco,1322355
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+ biotite/structure/sasa.cp310-win_amd64.pyd,sha256=vyzUXH_t1l524DTx6tXTQJqFyR6LVcJ44tGscSVNpnE,187392
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+ biotite/structure/sequence.py,sha256=JLrxZ4Gl1GND-Z-tP2lxRRUYfzPAw0onHqTXsmf6KyM,4263
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- biotite/structure/superimpose.py,sha256=DRGkXYeHOX1sM4S_xHBOY_mrLGoFy5hvOGeuCybFKVc,9352
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+ biotite/structure/superimpose.py,sha256=xskOEf8aJvfRDIQ-QF_BbDb0_Y5j6We9Q0_0TuRE-3k,26879
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@@ -266,61 +268,63 @@ biotite/structure/graphics/atoms.py,sha256=kgLdRfwOxsZCJ4PQCxiJC6cV-wSJ6qUSwvW4s
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+ biotite/structure/info/atoms.py,sha256=ScWweOXKeLhbOPtxVSYTT4ySfQG6ESAWd-7sOTpLQb0,2650
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- biotite/structure/info/misc.py,sha256=LEWdooTH8E6PDqFpgO8amwN2oPsYMad3Cx9QQKGJMl0,1920
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+ biotite/structure/info/ccd/amino_acids.txt,sha256=l1yE8BcddZ8aJtMhDr0wfn_zRHy-am39xuMm80DIsuA,8332
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+ biotite/structure/info/ccd/carbohydrates.txt,sha256=R6WD5xRqmmiYAQp6QrdtlSBF6IBVC4BeMPPl5keEMeA,5679
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+ biotite/structure/io/ctab.py,sha256=crhK0a-E0aa9xPEERdMhLu3CXeBi092OXFuUUmm5HXw,2255
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- biotite/structure/io/mmtf/convertfile.c,sha256=AKJ6OW0xPI5i_27vZyuCBbcDt3YN4z0GP9qGZ9s7uOA,1548920
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- biotite/structure/io/mmtf/decode.c,sha256=d4I-nnMGR43q0nqewHNOw85PJ1c590PpYrszPzd8FzA,1379620
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+ biotite/structure/io/mmtf/convertarray.c,sha256=YJwzn3JvCEAgV9Rqv4W5mkTVSX3-oRtFtOCqS4wTHSc,669776
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+ biotite/structure/io/mmtf/convertarray.cp310-win_amd64.pyd,sha256=ucn-lo_1b1w5K9BsTiZi7uIocoC9N1k9XUa1dx8RpKw,104960
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+ biotite/structure/io/mmtf/convertfile.c,sha256=G615skQjlASZT0si1jD4C6B9IHprUx8fDjUc_Kf4DlU,1548920
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+ biotite/structure/io/mmtf/convertfile.cp310-win_amd64.pyd,sha256=XRrtk01JJKoyNqAn_wyUYx7k9kEqDKrkUHkKEO58iaI,240640
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+ biotite/structure/io/mmtf/decode.c,sha256=reijpg_eZz-eNldqIAVgIhsCfTB4ask3F0-FOXxB0Z8,1379620
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+ biotite/structure/io/mmtf/decode.cp310-win_amd64.pyd,sha256=LTHFHTbU1RCWXUM8vvKoN53U9veOlrTC0NOt_yWuMdo,202752
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+ biotite/structure/io/mmtf/encode.c,sha256=elQYNYc7X9wW9j0DEJs3yEfC3p3p369mv90X7KVPZS8,1327444
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+ biotite/structure/io/mol/__init__.py,sha256=JvYPvpyywjkpRzQZbu-6VfJNVrcLfwqOlKxx1cVgU-M,600
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+ biotite/structure/io/mol/convert.py,sha256=mUflED5yKZZp5iczGOdi1AS17wXdgVhogZzuRdnW-1w,3895
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+ biotite/structure/io/mol/ctab.py,sha256=HskYb61-lATyf-sdyjWQ0EqTEA1fkhc4qGeCxwSfnwA,13945
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+ biotite/structure/io/mol/header.py,sha256=5gyk5bnsQZSNASmVOIVq7Ww8wM_qxhCy82aqAn_G4vE,3496
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+ biotite/structure/io/mol/mol.py,sha256=b7mR7ErSqGy18RhlS-Bpbq_BfFbPjNWpdq8M1h-xmUU,6486
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- biotite/structure/io/pdb/file.py,sha256=FFetp4Iy-CV_wvixp0BAhJx1Ew2370msEOPGgsPLN44,47202
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+ biotite/structure/io/pdb/file.py,sha256=l4iwz3FywAYrHMwuPIm1n2-mOMCDVptgE7d-4DivQig,49242
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  biotite/structure/io/pdb/hybrid36.c,sha256=yw8r2oBNNEMROcjaxNltVl_ToNMAEHy9_Y4ksV0NtaY,1110900
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- biotite/structure/io/pdb/hybrid36.cp310-win_amd64.pyd,sha256=okbNzMsJpukHLKUfmPLs3DlGxlCxz5GYAWlbtoW-0Uk,147456
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+ biotite/structure/io/pdb/hybrid36.cp310-win_amd64.pyd,sha256=WFx3lqCXnPEJtAnEQDOz50N-Nc9_wW6Q2PUzJLcfLFI,147456
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  biotite/structure/io/pdbqt/__init__.py,sha256=_e0Cyo-9kxX__O47RJwLJrylIWfAOiqqX-eVZ6w5RpQ,454
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  biotite/structure/io/pdbqt/convert.py,sha256=8DEo4oOhp5MXqXXr3EWHnKD4y4zI6kqZ-Fjv19g6IjI,4133
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  biotite/structure/io/pdbqt/file.py,sha256=okgs4zmpumCDkmrtQqbm6uCaM99J-cJlST1oNqGQqRY,27038
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- biotite/structure/io/pdbx/__init__.py,sha256=-eVtrykPw8Jup6mn3hQryWaQ8cN9tTasv7ptv3GDhBI,758
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- biotite/structure/io/pdbx/bcif.py,sha256=fOUQuPeEcYt2JmzVqYBtAgC_stQ1N2Yq3DNFjwLFmio,21065
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- biotite/structure/io/pdbx/cif.py,sha256=vV6Uau35WUNinU6sD29xwkkSi2yhSNUfZ9MHL0WXNKQ,33276
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- biotite/structure/io/pdbx/component.py,sha256=T0vAbDF_S6Zojipss7Kq8pTsVgJtRwGrOkXwxNEX4F8,8323
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- biotite/structure/io/pdbx/convert.py,sha256=i_zjTG3NMUW3ibnnab4uDxrjTgeuNLVTA7P6iQBi4TQ,56274
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- biotite/structure/io/pdbx/encoding.c,sha256=UaSWs7Fr4V6aYvlAgeencRg1N4i0F6LuqYaaGWPsn6Q,4731168
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- biotite/structure/io/pdbx/encoding.cp310-win_amd64.pyd,sha256=_N1Zt5ZqO9HiXZlJo5lW94IbBXgZ3HZfAXpMCmIkQoQ,976384
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- biotite/structure/io/pdbx/error.py,sha256=9j5OHx46cumrYrJZ6lkCgItRgF6emfF0eIg9DwvgSt4,393
321
+ biotite/structure/io/pdbx/__init__.py,sha256=aEMr9p4gbeQQFeWgwohV0TBPOa77hFfdhk6pgjTola4,736
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+ biotite/structure/io/pdbx/bcif.py,sha256=ds0XISbKBb1IDiNm215GW0Yfjlr9u8oA7oqvKQXFlig,21027
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+ biotite/structure/io/pdbx/cif.py,sha256=_f93PMs269cwEwMszGlqtd4Ajy_wONW1TWdTV8ThLs0,33469
324
+ biotite/structure/io/pdbx/component.py,sha256=v_DJAM8VgDUgT7bQQdqrA7yn6vzU7fy_cQ9YljAvw4U,8389
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+ biotite/structure/io/pdbx/convert.py,sha256=Pk89MknEXzAitzxYQdpwWSD4zz0IqOl3bFfu1xitGDU,61354
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+ biotite/structure/io/pdbx/encoding.c,sha256=EzcjdXNswm1yeHO1EFetw_pa_YZiKdSs4UL2CML2JwE,4731168
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+ biotite/structure/io/pdbx/encoding.cp310-win_amd64.pyd,sha256=_eg9wa4gqOcC5EAOdAsDpCKBNzeK7FZnHL6UvlFIQ7Y,976384
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  biotite/structure/io/pdbx/legacy.py,sha256=Nix6sAg5S4-hRsbRXltx2CIQJKa7B7TPnPEgFLm8XaE,9108
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  biotite/structure/io/tng/__init__.py,sha256=3aQ_lcXAswoklT3IkbCK6yLKDMjBJwE7jU0ke0aNLmE,368
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  biotite/structure/io/tng/file.py,sha256=MW861kpo8fRqd3GFHFuV0LALkP6Q8nPhQkuj-uz1gU0,1348
@@ -328,8 +332,8 @@ biotite/structure/io/trr/__init__.py,sha256=ayqC8DyqjJ93VVytJEdmBHNcHTaIZOCfktzp
328
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  biotite/structure/io/trr/file.py,sha256=4rS9HNoXQXCauquOTbkUWeveq9LEy0CKBNgi_IMTL-s,1348
329
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  biotite/structure/io/xtc/__init__.py,sha256=NHHFO6mTJCj3pfbP4saehOcKXrYr9CxVMSuJVb9QJHE,368
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  biotite/structure/io/xtc/file.py,sha256=UQ-QF5leM2ujMPde8RFe3dNShHXjl8lJ0qWU77QkbCY,1344
331
- biotite-0.40.0.dist-info/LICENSE.rst,sha256=wDDtR8LuBedgqNIor2N5YGv4nj9flZltCDSu2fhjGbo,1564
332
- biotite-0.40.0.dist-info/METADATA,sha256=bZaApTixEG5jblqNDNHutNAeuPPNvwy8EnEAY7VXb6U,7339
333
- biotite-0.40.0.dist-info/WHEEL,sha256=lO6CqtLHCAi38X3Es1a4R1lAjZFvN010IMRCFo2S7Mc,102
334
- biotite-0.40.0.dist-info/top_level.txt,sha256=Tvj5T6Zfz3AhevTRlDRVhNC1WgPlFk-wDtSkzTgFM8w,8
335
- biotite-0.40.0.dist-info/RECORD,,
335
+ biotite-0.41.0.dist-info/LICENSE.rst,sha256=wDDtR8LuBedgqNIor2N5YGv4nj9flZltCDSu2fhjGbo,1564
336
+ biotite-0.41.0.dist-info/METADATA,sha256=0LGUK1F2cL2-XIIPgWe4eINM6GkgaA3rUggBNeh2MZQ,7340
337
+ biotite-0.41.0.dist-info/WHEEL,sha256=lO6CqtLHCAi38X3Es1a4R1lAjZFvN010IMRCFo2S7Mc,102
338
+ biotite-0.41.0.dist-info/top_level.txt,sha256=Tvj5T6Zfz3AhevTRlDRVhNC1WgPlFk-wDtSkzTgFM8w,8
339
+ biotite-0.41.0.dist-info/RECORD,,
@@ -1,14 +0,0 @@
1
- # This source code is part of the Biotite package and is distributed
2
- # under the 3-Clause BSD License. Please see 'LICENSE.rst' for further
3
- # information.
4
-
5
- __name__ = "biotite.structure.io.pdbx"
6
- __author__ = "Patrick Kunzmann"
7
- __all__ = ["SerializationError", "DeserializationError"]
8
-
9
-
10
- class SerializationError(Exception):
11
- pass
12
-
13
- class DeserializationError(Exception):
14
- pass