biotite 0.40.0__cp310-cp310-macosx_11_0_arm64.whl → 0.41.0__cp310-cp310-macosx_11_0_arm64.whl

{biotite-0.40.0.dist-info → biotite-0.41.0.dist-info}/RECORD

@@ -1,12 +1,12 @@
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 biotite/visualize.py,sha256=mLME6fOGwdcUZLUzDTbwUpZokC4D1cVE6ICdtJDc0yw,9842
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 biotite/temp.py,sha256=AenIC7m3rrezikJDKgTEnLZigACubfsw_UcmYMGyGa8,2045
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 biotite/database/__init__.py,sha256=_C25CsDE8O_770Vmk6sCK4FKlQ0A1hUhWaMRPOvkDtM,724
@@ -21,8 +21,8 @@ biotite/database/uniprot/query.py,sha256=bzJenXwN3iKLxwJT9uaB19LBam8GRYWfeBzS_Py
 biotite/database/uniprot/download.py,sha256=rWrgLrDCnItLe5fU3_oSZvYJToqWmqfffN5JvBumdyM,4378
 biotite/database/uniprot/__init__.py,sha256=Lsk5Jd-qb5167VTgN48lWSSbqpjCM-fD0XKJyxaZb7o,334
 biotite/database/pubchem/error.py,sha256=5kLtd9r3KkR9PZfTEfaRA5LRIG2K-XQKqiEBZZ0pd4g,711
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 biotite/database/pubchem/throttle.py,sha256=RzMFaBKJVWygH2QlLQEFO_EBcN7nGxj6Sq-sAB7njvY,3534
 biotite/database/rcsb/query.py,sha256=I5eAsdsW8FT-O0cKz_71dpS-HrEe0VtauliAPQMPBSo,33065
@@ -57,10 +57,10 @@ biotite/application/clustalo/app.py,sha256=tPZFZ5SP1jCE1OQlTz7WzFOmdZ5B6JHTTjaCU
 biotite/application/muscle/app3.py,sha256=tm51pw2zuDcuua-an5eaD_oBGh_PBL8vdlGdfUkXLF4,8450
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 biotite/application/muscle/app5.py,sha256=9tbw6XISmu9CEvFPDxoXW72HnrpAPf0MZY4jH7F8jK0,4799
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 biotite/sequence/sequence.py,sha256=AbOf4a3ApXUBgflzYRux2nqpd6jDCXVAByUBkt9Jroo,11911
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@@ -70,7 +70,7 @@ biotite/sequence/search.py,sha256=er8lqF2WM4rFG3gixxgEnJ8yNHiWae--02TjJCNRo1c,31
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 biotite/sequence/io/general.py,sha256=4HIIU6VNNfOLfVqAkg_mXzmNZZlOeJWzwsChu_dTVvc,6570
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@@ -84,35 +84,35 @@ biotite/sequence/io/genbank/file.py,sha256=lY5LPFJU7q1mGWkE_iF8XQgBzkY_3aOFCxI9n
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+biotite/structure/sequence.py,sha256=s_ugDoGWYWTfUprxOOR-fv422qFkQFkOshLQ0yXXw4Q,4152
+biotite/structure/sasa.cpython-310-darwin.so,sha256=QWqSbnxVj_YimIwCqxwHDZ39zsMaUY3GaGOF4ldkzgU,282919
+biotite/structure/__init__.py,sha256=x60JjCz9II2kvycGwLHvdWMOKsF3Oqdy9oPbqXMskuU,5323
 biotite/structure/mechanics.py,sha256=wQIK33d6NhJNTxqr6fSashXrlraLJC3-xcfCXM6ZPqA,2702
 biotite/structure/sse.py,sha256=8fa1-bRax5nZQKYRqr893ymn-Uv1SASg3yKx8HDi5dg,11963
-biotite/structure/charges.c,sha256=8yY73BwAEnzLB-5KwOTgii0eIRzj8KbODAxqNIjrCE8,1415318
-biotite/structure/charges.cpython-310-darwin.so,sha256=_Dvf_2bsXD_9_n9oMvhqYmkpG7fAUy28xUbQw5CudF0,283498
+biotite/structure/charges.c,sha256=XtyAXn9rCsYHzg16cIXd0BlOSiiyFh9YluKAE1keTaI,1415318
+biotite/structure/charges.cpython-310-darwin.so,sha256=nKbqvI2wTihm6fTfRIQWvqK8qSzTuGcbqXGXsFZ9pFY,283498
 biotite/structure/density.py,sha256=TLKvLLbKRWDmH_A0mSFZeHkmbFb49lyyiL7Eeu-mLEg,4234
 biotite/structure/rdf.py,sha256=dS99s-n_N9zunYn5AQffXdEkapmUizGkugGLj9EDXBo,8059
 biotite/structure/transform.py,sha256=4xlUbN1JiLqw1Tc-qFKNWj2qBJb0jXadW_LuJWHcsQc,19767
@@ -257,32 +259,31 @@ biotite/structure/geometry.py,sha256=yWHq7u50_TqqpFpG4ARVZNqCal9JFJWnRyYADdvgEYs
 biotite/structure/molecules.py,sha256=_p09r_BmyMs6QcbxrZhGuT2qwR8oQrgHV2OMQ5W7U9g,15478
 biotite/structure/filter.py,sha256=k0BpA7E980Yzyt5EE8KQTlyhs0XOud3G5jdq6mRzTwM,18716
 biotite/structure/atoms.py,sha256=dyIp5l5QuMcmqDcimNU94NsLF3zqZtbyK4dN-w1OLoc,48016
-biotite/structure/bonds.cpython-310-darwin.so,sha256=HtLXqJEBqJkI9JbsuqKkdXUI-j0Ep2E9khYLvKRgHjo,582888
+biotite/structure/bonds.cpython-310-darwin.so,sha256=kXcf7r8HfS-SsJ6RmKIuBqED1OKexe_HYj1pDRhADXE,599688
 biotite/structure/pseudoknots.py,sha256=C8Id-1QyNBDuQNRCumspE_RoXuDNqJ-eFEimuzFdLIo,22380
 biotite/structure/basepairs.py,sha256=7TK4E-PXjt0GwE1JOE_AUfKmbrUY1IE9Tc6I9HLpb2s,50148
-biotite/structure/sasa.c,sha256=T1WBb_dph5nY5hew8hbEp2_2wu5Dfp2lP0GB-U6BTds,1327338
-biotite/structure/integrity.py,sha256=9XndLoDGyOxB6l16to5mv4sGyUyRTb2PxD_hxxPk_ec,10061
+biotite/structure/sasa.c,sha256=fb3hVGSMDMRqchUwi6k-tdparQ84plxPTLeu_yYzVvg,1327338
+biotite/structure/integrity.py,sha256=Z1g7HLB-nFtCWXbhZ2QyVML9jvnXty6YwO_FTpaWfzc,8609
 biotite/structure/compare.py,sha256=eBUGhlTSYApvoKoZ4LnMI5Ku2sB9aCeQ-V7Fcld4YiM,9502
 biotite/structure/hbond.py,sha256=zkJ1NLaOGhpwUz7WFd6ATihlJ44GGEZ9rRc9JRZ_PzE,15162
-biotite/structure/dotbracket.py,sha256=HEE79LzPeKNW2DXmg0VLfNCs8xmdc1Wlj8kebPep1H8,6837
+biotite/structure/dotbracket.py,sha256=dzuqP1J51sq85Ng0J7IfWUXT103gIjuQsare99-jeOU,6885
 biotite/structure/residues.py,sha256=dywbV7cTrJSNBAugC012gKrx_GrMZOcs7J76ojBM2AY,22370
 biotite/structure/io/trajfile.py,sha256=9hAnnKKycYXqEyaPoy3CxYJHC_PA9d_iUSmIstJfqFU,25694
 biotite/structure/io/__init__.py,sha256=ROMPxtVLBLjvMWskQefRcSjeLlzAJP9H1lTWokp9oIc,1034
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 biotite/structure/io/dcd/__init__.py,sha256=APOO_JGG2CyUCLF4xCPmA-Ji79r4rAUaoSXajzkOEWg,387
 biotite/structure/io/dcd/file.py,sha256=JLAOdn4LkTfXqIEvbwtRHiXvRcJYEcFwr7kaIKOmC-g,2170
 biotite/structure/io/trr/__init__.py,sha256=ut-5WHHpk0n1Vs6zHhi4RnNHb3NQsLH8iVclcmkEbQE,358
 biotite/structure/io/trr/file.py,sha256=kE4pOoJJL6eKtPHcSRyirTK4Tsrv_mMJOhTY8gxidMM,1302
 biotite/structure/io/pdbx/legacy.py,sha256=01mS2bA5_GptHDpe_F7_6IyueQ8_tlgB_X_m9dRa694,8842
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-biotite/structure/io/pdbx/encoding.cpython-310-darwin.so,sha256=RwEw74CAKFCIVV7cfLyYF52JFDCGPQEyuZjAL20QOsc,1157387
-biotite/structure/io/pdbx/cif.py,sha256=29QXV5gMJSiI1-pJOY7QINbdNgDMYknW9PJ6GVRUdtM,32248
-biotite/structure/io/pdbx/component.py,sha256=jBFoQ9X6Sj-rSi1wBud2JebjlcsUr-KmqSQpfkJ28xQ,8080
-biotite/structure/io/pdbx/encoding.c,sha256=XPUviwhkPf-vmz0coPpaosk5Ke3w-uTzRNl2_49SAo0,4736141
+biotite/structure/io/pdbx/bcif.py,sha256=u4F5FxpGIA0jR1gaG_SRGJNlLjHSo-xzueBcHfE_ukE,20379
+biotite/structure/io/pdbx/convert.py,sha256=jrBqyx5vEnZLr81MXeZxjHrubmGzph3KNKYQm6c2Eyc,59757
+biotite/structure/io/pdbx/__init__.py,sha256=2rl6Fn2aPcu8-2QtgIVzjCOPVdvCWfqZh3LJr43TUP8,714
+biotite/structure/io/pdbx/encoding.cpython-310-darwin.so,sha256=9TIAGoITXOpHD4dpW1KFJ2j4jd01UU7GK7a_c3-B6ig,1157387
+biotite/structure/io/pdbx/cif.py,sha256=OuL9csoC1BsyMutILRnPL433LPvNxcTwnJcv-RzLpao,32437
+biotite/structure/io/pdbx/component.py,sha256=vS_aicTCme52-nqfjJPz4ZhKhbBZYHU7kOVLUOU7ypA,8143
+biotite/structure/io/pdbx/encoding.c,sha256=RaXH6QC1mzrz6W1kAqU0F99OXP8eLf7mdrhSJwdRioA,4736141
 biotite/structure/io/tng/__init__.py,sha256=7JZqpfMSSlQItvolf_JGn2PRrAh1P_1AX1C18Oo5uww,356
 biotite/structure/io/tng/file.py,sha256=ulIW3m1wfSARQoNQwhE2TcLnDyWf7U3Q6_pN4tgSb9I,1302
 biotite/structure/io/npz/__init__.py,sha256=WBUmxbb3qaFjLdAQwzYhVI_vh8w7gMZRlcpNZBYBc0s,736
@@ -295,41 +296,44 @@ biotite/structure/io/pdbqt/file.py,sha256=mSeaAXfgYH0SDKTiIH-TvKgMbJeWkoUbqngE7R
 biotite/structure/io/netcdf/__init__.py,sha256=Vzr56ymoVeSlXqEF-nhPJFPBjxSFWuyD9uy8QpzhFyU,349
 biotite/structure/io/netcdf/file.py,sha256=AW2TX7qubiDqI27Q9zknC4zE5mrZetjk8U6QNhqUnpg,2156
 biotite/structure/io/gro/__init__.py,sha256=lY39nljfVlWbHsR4RKAM3rRJzZdQliRevVzZM1MT-eY,407
-biotite/structure/io/gro/file.py,sha256=TiPUGb1_kMLGtkKO_7xXYmZ6v7KYcLzgyDlk6OkLAl4,12948
-biotite/structure/io/mol/convert.py,sha256=BMMq4W2765XwglI0RxDSDUbpk_fuQNPmpsBbGWGaNMQ,1305
-biotite/structure/io/mol/__init__.py,sha256=DT2L1kMbZeUKt6OgWOaI9pn1h5sP3qkXcdRM-qMdRXY,541
-biotite/structure/io/mol/file.py,sha256=ljV4rpbUv7o9lUvWxT06HmNs9wbfT4a-QrAWYzDDF-Q,7388
+biotite/structure/io/gro/file.py,sha256=AEmYhsl1ieO1OJ1sg4pSCDt2j9Iguurnhn-aFCqAFCM,12800
+biotite/structure/io/mol/header.py,sha256=l-1vqEEnxgJ6KhWFfkf3xATf-SETOERB-apS_npFnwg,3381
+biotite/structure/io/mol/convert.py,sha256=vPS3ZzbVX9qpWj4f5lz0_XtZ_GW6WkBJMfcqCbC8eYM,3781
+biotite/structure/io/mol/__init__.py,sha256=fuqvVcydfrxekEsU7qAQ2Zb9sYX3vfQ1uygG20wJNZg,581
+biotite/structure/io/mol/ctab.py,sha256=retJO8KrIgpg9FxjvrRnCeI6BwqYo43Duh2Kfv_B2Ik,13532
+biotite/structure/io/mol/mol.py,sha256=_55esbURwK1sNWkSopDR6WOpOOPdGXwaDW74_-pWrgg,6293
+biotite/structure/io/mol/sdf.py,sha256=IsHlF2JADsu_18tdhRlaXxYdJUE0TMgceTG-jGv-QuE,32006
 biotite/structure/io/pdb/hybrid36.c,sha256=QnVrzSl-4F2C33KonKXRql1jPMhbywHQVUoMwwCwgfM,1110875
 biotite/structure/io/pdb/convert.py,sha256=jysm2PrrfyzYy3ZmkIiMuOEoaSdID5qDkJ7LHI3WavA,10659
 biotite/structure/io/pdb/__init__.py,sha256=2qtLwVQu10AZhk-DUAqcIbvofyIC8BKGh4Gk9b_Ha70,732
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 biotite/structure/io/mmtf/__init__.py,sha256=5kmc5agVc7eCUhtA0DCKIj7eR8qlvaqIIaJXUHFnc6k,662
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 biotite/structure/io/mmtf/file.py,sha256=mMNUCXx6cKptqqcfteE_2i-e_PPwDAyVFLebZnvoQS4,6946
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 biotite/structure/io/mmtf/assembly.py,sha256=HYVy2Knir1TqWT_NfvrmUmR2UX8eFNzVmQImSLZP-7w,8184
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 biotite/structure/info/atom_masses.json,sha256=WME4ezDPy-HrEIhxkOGxcmIMdgxf1x7e_xwBkFRdTsY,2383
 biotite/structure/info/__init__.py,sha256=k57tfM03apKfR3UlJMoDXZHS6jilhkeni1DoQa_nWLs,702
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 biotite/structure/info/radii.py,sha256=GlTPOCvtqGy7PQJlTOZA57PXg7xPLwKYEy0wcrCmiEc,5648
 biotite/structure/info/standardize.py,sha256=AaYn7mx6Y6NylkeOg1kIpyNoI-KrWbGSXXu_GEcSAZw,7772
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 biotite/structure/info/masses.py,sha256=dnZbg4k_89SuTwFUulyTKAL6Mnk4POPMIVhJLl5xswA,4489
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 biotite/structure/info/ccd.py,sha256=26BnKJEGH6Bhmvkll_ev6HSCIi0hNx_cs_N9hqNXP-4,2754
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 biotite/structure/info/ccd/README.rst,sha256=sfFRGesjpATIp5S8kiEV7cr-Jb51fWLGT4KypmzsoPM,342
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 biotite/structure/graphics/__init__.py,sha256=YwMT8-c2DjrkcwyK6jPeDtAKxQda0OhElnwk8J0y3Hc,353
 biotite/structure/graphics/rna.py,sha256=bhIHoB_9sFuZPrHQ8qQnToRiTCfgQ7JLVNIdsQVvkw8,11888
 biotite/structure/graphics/atoms.py,sha256=nMhbmnjytxEDkxTTm2wHM2dObSw3izjvRbqssCW876E,8171

biotite/structure/io/pdbx/error.py

@@ -1,14 +0,0 @@
-# This source code is part of the Biotite package and is distributed
-# under the 3-Clause BSD License. Please see 'LICENSE.rst' for further
-# information.
-
-__name__ = "biotite.structure.io.pdbx"
-__author__ = "Patrick Kunzmann"
-__all__ = ["SerializationError", "DeserializationError"]
-
-
-class SerializationError(Exception):
-    pass
-
-class DeserializationError(Exception):
-    pass