biotite 0.39.0__cp312-cp312-macosx_11_0_arm64.whl → 0.41.0__cp312-cp312-macosx_11_0_arm64.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Potentially problematic release.
This version of biotite might be problematic. Click here for more details.
- biotite/__init__.py +3 -3
- biotite/application/dssp/app.py +18 -18
- biotite/database/pubchem/download.py +23 -23
- biotite/database/pubchem/query.py +7 -7
- biotite/database/rcsb/download.py +19 -14
- biotite/file.py +17 -9
- biotite/sequence/align/banded.c +256 -235
- biotite/sequence/align/banded.cpython-312-darwin.so +0 -0
- biotite/sequence/align/cigar.py +60 -15
- biotite/sequence/align/kmeralphabet.c +241 -220
- biotite/sequence/align/kmeralphabet.cpython-312-darwin.so +0 -0
- biotite/sequence/align/kmersimilarity.c +213 -194
- biotite/sequence/align/kmersimilarity.cpython-312-darwin.so +0 -0
- biotite/sequence/align/kmertable.cpp +231 -203
- biotite/sequence/align/kmertable.cpython-312-darwin.so +0 -0
- biotite/sequence/align/localgapped.c +256 -235
- biotite/sequence/align/localgapped.cpython-312-darwin.so +0 -0
- biotite/sequence/align/localungapped.c +233 -212
- biotite/sequence/align/localungapped.cpython-312-darwin.so +0 -0
- biotite/sequence/align/multiple.c +253 -232
- biotite/sequence/align/multiple.cpython-312-darwin.so +0 -0
- biotite/sequence/align/pairwise.c +272 -251
- biotite/sequence/align/pairwise.cpython-312-darwin.so +0 -0
- biotite/sequence/align/permutation.c +213 -194
- biotite/sequence/align/permutation.cpython-312-darwin.so +0 -0
- biotite/sequence/align/selector.c +215 -195
- biotite/sequence/align/selector.cpython-312-darwin.so +0 -0
- biotite/sequence/align/tracetable.c +213 -193
- biotite/sequence/align/tracetable.cpython-312-darwin.so +0 -0
- biotite/sequence/annotation.py +2 -2
- biotite/sequence/codec.c +233 -212
- biotite/sequence/codec.cpython-312-darwin.so +0 -0
- biotite/sequence/io/fasta/convert.py +27 -24
- biotite/sequence/phylo/nj.c +213 -194
- biotite/sequence/phylo/nj.cpython-312-darwin.so +0 -0
- biotite/sequence/phylo/tree.c +225 -200
- biotite/sequence/phylo/tree.cpython-312-darwin.so +0 -0
- biotite/sequence/phylo/upgma.c +213 -194
- biotite/sequence/phylo/upgma.cpython-312-darwin.so +0 -0
- biotite/structure/__init__.py +2 -0
- biotite/structure/basepairs.py +7 -12
- biotite/structure/bonds.c +1435 -1277
- biotite/structure/bonds.cpython-312-darwin.so +0 -0
- biotite/structure/celllist.c +215 -195
- biotite/structure/celllist.cpython-312-darwin.so +0 -0
- biotite/structure/charges.c +1050 -1099
- biotite/structure/charges.cpython-312-darwin.so +0 -0
- biotite/structure/dotbracket.py +2 -0
- biotite/structure/filter.py +30 -37
- biotite/structure/info/__init__.py +5 -8
- biotite/structure/info/atoms.py +31 -68
- biotite/structure/info/bonds.py +47 -101
- biotite/structure/info/ccd/README.rst +8 -0
- biotite/structure/info/ccd/amino_acids.txt +1663 -0
- biotite/structure/info/ccd/carbohydrates.txt +1135 -0
- biotite/structure/info/ccd/components.bcif +0 -0
- biotite/structure/info/ccd/nucleotides.txt +798 -0
- biotite/structure/info/ccd.py +95 -0
- biotite/structure/info/groups.py +90 -0
- biotite/structure/info/masses.py +21 -20
- biotite/structure/info/misc.py +78 -25
- biotite/structure/info/standardize.py +17 -12
- biotite/structure/integrity.py +19 -70
- biotite/structure/io/__init__.py +2 -4
- biotite/structure/io/ctab.py +12 -106
- biotite/structure/io/general.py +167 -181
- biotite/structure/io/gro/file.py +16 -16
- biotite/structure/io/mmtf/__init__.py +3 -0
- biotite/structure/io/mmtf/convertarray.c +217 -196
- biotite/structure/io/mmtf/convertarray.cpython-312-darwin.so +0 -0
- biotite/structure/io/mmtf/convertfile.c +215 -195
- biotite/structure/io/mmtf/convertfile.cpython-312-darwin.so +0 -0
- biotite/structure/io/mmtf/decode.c +223 -202
- biotite/structure/io/mmtf/decode.cpython-312-darwin.so +0 -0
- biotite/structure/io/mmtf/encode.c +213 -194
- biotite/structure/io/mmtf/encode.cpython-312-darwin.so +0 -0
- biotite/structure/io/mmtf/file.py +34 -26
- biotite/structure/io/mol/__init__.py +4 -2
- biotite/structure/io/mol/convert.py +71 -7
- biotite/structure/io/mol/ctab.py +414 -0
- biotite/structure/io/mol/header.py +116 -0
- biotite/structure/io/mol/{file.py → mol.py} +69 -82
- biotite/structure/io/mol/sdf.py +909 -0
- biotite/structure/io/npz/__init__.py +3 -0
- biotite/structure/io/npz/file.py +21 -18
- biotite/structure/io/pdb/__init__.py +3 -3
- biotite/structure/io/pdb/file.py +89 -34
- biotite/structure/io/pdb/hybrid36.c +63 -43
- biotite/structure/io/pdb/hybrid36.cpython-312-darwin.so +0 -0
- biotite/structure/io/pdbqt/file.py +32 -32
- biotite/structure/io/pdbx/__init__.py +12 -6
- biotite/structure/io/pdbx/bcif.py +648 -0
- biotite/structure/io/pdbx/cif.py +1032 -0
- biotite/structure/io/pdbx/component.py +246 -0
- biotite/structure/io/pdbx/convert.py +858 -386
- biotite/structure/io/pdbx/encoding.c +112803 -0
- biotite/structure/io/pdbx/encoding.cpython-312-darwin.so +0 -0
- biotite/structure/io/pdbx/legacy.py +267 -0
- biotite/structure/molecules.py +151 -151
- biotite/structure/repair.py +253 -0
- biotite/structure/sasa.c +213 -194
- biotite/structure/sasa.cpython-312-darwin.so +0 -0
- biotite/structure/sequence.py +112 -0
- biotite/structure/superimpose.py +618 -116
- {biotite-0.39.0.dist-info → biotite-0.41.0.dist-info}/METADATA +3 -3
- {biotite-0.39.0.dist-info → biotite-0.41.0.dist-info}/RECORD +109 -103
- {biotite-0.39.0.dist-info → biotite-0.41.0.dist-info}/WHEEL +1 -1
- biotite/structure/info/amino_acids.json +0 -1556
- biotite/structure/info/amino_acids.py +0 -42
- biotite/structure/info/carbohydrates.json +0 -1122
- biotite/structure/info/carbohydrates.py +0 -39
- biotite/structure/info/intra_bonds.msgpack +0 -0
- biotite/structure/info/link_types.msgpack +0 -1
- biotite/structure/info/nucleotides.json +0 -772
- biotite/structure/info/nucleotides.py +0 -39
- biotite/structure/info/residue_masses.msgpack +0 -0
- biotite/structure/info/residue_names.msgpack +0 -3
- biotite/structure/info/residues.msgpack +0 -0
- biotite/structure/io/pdbx/file.py +0 -652
- {biotite-0.39.0.dist-info → biotite-0.41.0.dist-info}/LICENSE.rst +0 -0
- {biotite-0.39.0.dist-info → biotite-0.41.0.dist-info}/top_level.txt +0 -0
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
/* Generated by Cython 3.0.
|
|
1
|
+
/* Generated by Cython 3.0.10 */
|
|
2
2
|
|
|
3
3
|
/* BEGIN: Cython Metadata
|
|
4
4
|
{
|
|
@@ -37,10 +37,10 @@ END: Cython Metadata */
|
|
|
37
37
|
#else
|
|
38
38
|
#define __PYX_EXTRA_ABI_MODULE_NAME ""
|
|
39
39
|
#endif
|
|
40
|
-
#define CYTHON_ABI "
|
|
40
|
+
#define CYTHON_ABI "3_0_10" __PYX_EXTRA_ABI_MODULE_NAME
|
|
41
41
|
#define __PYX_ABI_MODULE_NAME "_cython_" CYTHON_ABI
|
|
42
42
|
#define __PYX_TYPE_MODULE_PREFIX __PYX_ABI_MODULE_NAME "."
|
|
43
|
-
#define CYTHON_HEX_VERSION
|
|
43
|
+
#define CYTHON_HEX_VERSION 0x03000AF0
|
|
44
44
|
#define CYTHON_FUTURE_DIVISION 1
|
|
45
45
|
#include <stddef.h>
|
|
46
46
|
#ifndef offsetof
|
|
@@ -132,6 +132,8 @@ END: Cython Metadata */
|
|
|
132
132
|
#ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
|
|
133
133
|
#define CYTHON_UPDATE_DESCRIPTOR_DOC 0
|
|
134
134
|
#endif
|
|
135
|
+
#undef CYTHON_USE_FREELISTS
|
|
136
|
+
#define CYTHON_USE_FREELISTS 0
|
|
135
137
|
#elif defined(PYPY_VERSION)
|
|
136
138
|
#define CYTHON_COMPILING_IN_PYPY 1
|
|
137
139
|
#define CYTHON_COMPILING_IN_CPYTHON 0
|
|
@@ -193,6 +195,8 @@ END: Cython Metadata */
|
|
|
193
195
|
#ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
|
|
194
196
|
#define CYTHON_UPDATE_DESCRIPTOR_DOC 0
|
|
195
197
|
#endif
|
|
198
|
+
#undef CYTHON_USE_FREELISTS
|
|
199
|
+
#define CYTHON_USE_FREELISTS 0
|
|
196
200
|
#elif defined(CYTHON_LIMITED_API)
|
|
197
201
|
#ifdef Py_LIMITED_API
|
|
198
202
|
#undef __PYX_LIMITED_VERSION_HEX
|
|
@@ -254,6 +258,8 @@ END: Cython Metadata */
|
|
|
254
258
|
#ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
|
|
255
259
|
#define CYTHON_UPDATE_DESCRIPTOR_DOC 0
|
|
256
260
|
#endif
|
|
261
|
+
#undef CYTHON_USE_FREELISTS
|
|
262
|
+
#define CYTHON_USE_FREELISTS 0
|
|
257
263
|
#elif defined(Py_GIL_DISABLED) || defined(Py_NOGIL)
|
|
258
264
|
#define CYTHON_COMPILING_IN_PYPY 0
|
|
259
265
|
#define CYTHON_COMPILING_IN_CPYTHON 0
|
|
@@ -263,11 +269,17 @@ END: Cython Metadata */
|
|
|
263
269
|
#ifndef CYTHON_USE_TYPE_SLOTS
|
|
264
270
|
#define CYTHON_USE_TYPE_SLOTS 1
|
|
265
271
|
#endif
|
|
272
|
+
#ifndef CYTHON_USE_TYPE_SPECS
|
|
273
|
+
#define CYTHON_USE_TYPE_SPECS 0
|
|
274
|
+
#endif
|
|
266
275
|
#undef CYTHON_USE_PYTYPE_LOOKUP
|
|
267
276
|
#define CYTHON_USE_PYTYPE_LOOKUP 0
|
|
268
277
|
#ifndef CYTHON_USE_ASYNC_SLOTS
|
|
269
278
|
#define CYTHON_USE_ASYNC_SLOTS 1
|
|
270
279
|
#endif
|
|
280
|
+
#ifndef CYTHON_USE_PYLONG_INTERNALS
|
|
281
|
+
#define CYTHON_USE_PYLONG_INTERNALS 0
|
|
282
|
+
#endif
|
|
271
283
|
#undef CYTHON_USE_PYLIST_INTERNALS
|
|
272
284
|
#define CYTHON_USE_PYLIST_INTERNALS 0
|
|
273
285
|
#ifndef CYTHON_USE_UNICODE_INTERNALS
|
|
@@ -275,8 +287,6 @@ END: Cython Metadata */
|
|
|
275
287
|
#endif
|
|
276
288
|
#undef CYTHON_USE_UNICODE_WRITER
|
|
277
289
|
#define CYTHON_USE_UNICODE_WRITER 0
|
|
278
|
-
#undef CYTHON_USE_PYLONG_INTERNALS
|
|
279
|
-
#define CYTHON_USE_PYLONG_INTERNALS 0
|
|
280
290
|
#ifndef CYTHON_AVOID_BORROWED_REFS
|
|
281
291
|
#define CYTHON_AVOID_BORROWED_REFS 0
|
|
282
292
|
#endif
|
|
@@ -288,11 +298,22 @@ END: Cython Metadata */
|
|
|
288
298
|
#endif
|
|
289
299
|
#undef CYTHON_FAST_THREAD_STATE
|
|
290
300
|
#define CYTHON_FAST_THREAD_STATE 0
|
|
301
|
+
#undef CYTHON_FAST_GIL
|
|
302
|
+
#define CYTHON_FAST_GIL 0
|
|
303
|
+
#ifndef CYTHON_METH_FASTCALL
|
|
304
|
+
#define CYTHON_METH_FASTCALL 1
|
|
305
|
+
#endif
|
|
291
306
|
#undef CYTHON_FAST_PYCALL
|
|
292
307
|
#define CYTHON_FAST_PYCALL 0
|
|
308
|
+
#ifndef CYTHON_PEP487_INIT_SUBCLASS
|
|
309
|
+
#define CYTHON_PEP487_INIT_SUBCLASS 1
|
|
310
|
+
#endif
|
|
293
311
|
#ifndef CYTHON_PEP489_MULTI_PHASE_INIT
|
|
294
312
|
#define CYTHON_PEP489_MULTI_PHASE_INIT 1
|
|
295
313
|
#endif
|
|
314
|
+
#ifndef CYTHON_USE_MODULE_STATE
|
|
315
|
+
#define CYTHON_USE_MODULE_STATE 0
|
|
316
|
+
#endif
|
|
296
317
|
#ifndef CYTHON_USE_TP_FINALIZE
|
|
297
318
|
#define CYTHON_USE_TP_FINALIZE 1
|
|
298
319
|
#endif
|
|
@@ -300,6 +321,12 @@ END: Cython Metadata */
|
|
|
300
321
|
#define CYTHON_USE_DICT_VERSIONS 0
|
|
301
322
|
#undef CYTHON_USE_EXC_INFO_STACK
|
|
302
323
|
#define CYTHON_USE_EXC_INFO_STACK 0
|
|
324
|
+
#ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
|
|
325
|
+
#define CYTHON_UPDATE_DESCRIPTOR_DOC 1
|
|
326
|
+
#endif
|
|
327
|
+
#ifndef CYTHON_USE_FREELISTS
|
|
328
|
+
#define CYTHON_USE_FREELISTS 0
|
|
329
|
+
#endif
|
|
303
330
|
#else
|
|
304
331
|
#define CYTHON_COMPILING_IN_PYPY 0
|
|
305
332
|
#define CYTHON_COMPILING_IN_CPYTHON 1
|
|
@@ -390,6 +417,9 @@ END: Cython Metadata */
|
|
|
390
417
|
#ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
|
|
391
418
|
#define CYTHON_UPDATE_DESCRIPTOR_DOC 1
|
|
392
419
|
#endif
|
|
420
|
+
#ifndef CYTHON_USE_FREELISTS
|
|
421
|
+
#define CYTHON_USE_FREELISTS 1
|
|
422
|
+
#endif
|
|
393
423
|
#endif
|
|
394
424
|
#if !defined(CYTHON_FAST_PYCCALL)
|
|
395
425
|
#define CYTHON_FAST_PYCCALL (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1)
|
|
@@ -582,14 +612,14 @@ END: Cython Metadata */
|
|
|
582
612
|
PyObject *exception_table = NULL;
|
|
583
613
|
PyObject *types_module=NULL, *code_type=NULL, *result=NULL;
|
|
584
614
|
#if __PYX_LIMITED_VERSION_HEX < 0x030B0000
|
|
585
|
-
PyObject *version_info;
|
|
615
|
+
PyObject *version_info;
|
|
586
616
|
PyObject *py_minor_version = NULL;
|
|
587
617
|
#endif
|
|
588
618
|
long minor_version = 0;
|
|
589
619
|
PyObject *type, *value, *traceback;
|
|
590
620
|
PyErr_Fetch(&type, &value, &traceback);
|
|
591
621
|
#if __PYX_LIMITED_VERSION_HEX >= 0x030B0000
|
|
592
|
-
minor_version = 11;
|
|
622
|
+
minor_version = 11;
|
|
593
623
|
#else
|
|
594
624
|
if (!(version_info = PySys_GetObject("version_info"))) goto end;
|
|
595
625
|
if (!(py_minor_version = PySequence_GetItem(version_info, 1))) goto end;
|
|
@@ -647,7 +677,7 @@ END: Cython Metadata */
|
|
|
647
677
|
PyObject *fv, PyObject *cell, PyObject* fn,
|
|
648
678
|
PyObject *name, int fline, PyObject *lnos) {
|
|
649
679
|
PyCodeObject *result;
|
|
650
|
-
PyObject *empty_bytes = PyBytes_FromStringAndSize("", 0);
|
|
680
|
+
PyObject *empty_bytes = PyBytes_FromStringAndSize("", 0);
|
|
651
681
|
if (!empty_bytes) return NULL;
|
|
652
682
|
result =
|
|
653
683
|
#if PY_VERSION_HEX >= 0x030C0000
|
|
@@ -733,8 +763,13 @@ END: Cython Metadata */
|
|
|
733
763
|
typedef PyObject *(*__Pyx_PyCFunctionFastWithKeywords) (PyObject *self, PyObject *const *args,
|
|
734
764
|
Py_ssize_t nargs, PyObject *kwnames);
|
|
735
765
|
#else
|
|
736
|
-
#
|
|
737
|
-
#define
|
|
766
|
+
#if PY_VERSION_HEX >= 0x030d00A4
|
|
767
|
+
# define __Pyx_PyCFunctionFast PyCFunctionFast
|
|
768
|
+
# define __Pyx_PyCFunctionFastWithKeywords PyCFunctionFastWithKeywords
|
|
769
|
+
#else
|
|
770
|
+
# define __Pyx_PyCFunctionFast _PyCFunctionFast
|
|
771
|
+
# define __Pyx_PyCFunctionFastWithKeywords _PyCFunctionFastWithKeywords
|
|
772
|
+
#endif
|
|
738
773
|
#endif
|
|
739
774
|
#if CYTHON_METH_FASTCALL
|
|
740
775
|
#define __Pyx_METH_FASTCALL METH_FASTCALL
|
|
@@ -1086,7 +1121,7 @@ static CYTHON_INLINE PyObject * __Pyx_PyDict_GetItemStrWithError(PyObject *dict,
|
|
|
1086
1121
|
#define __Pyx_PyBytes_GET_SIZE(o) PyBytes_Size(o)
|
|
1087
1122
|
#define __Pyx_PyByteArray_GET_SIZE(o) PyByteArray_Size(o)
|
|
1088
1123
|
#endif
|
|
1089
|
-
#if
|
|
1124
|
+
#if __PYX_LIMITED_VERSION_HEX >= 0x030d00A1
|
|
1090
1125
|
#define __Pyx_PyImport_AddModuleRef(name) PyImport_AddModuleRef(name)
|
|
1091
1126
|
#else
|
|
1092
1127
|
static CYTHON_INLINE PyObject *__Pyx_PyImport_AddModuleRef(const char *name) {
|
|
@@ -1173,7 +1208,7 @@ static CYTHON_INLINE float __PYX_NAN() {
|
|
|
1173
1208
|
#endif
|
|
1174
1209
|
|
|
1175
1210
|
#define __PYX_MARK_ERR_POS(f_index, lineno) \
|
|
1176
|
-
{ __pyx_filename = __pyx_f[f_index]; (void)__pyx_filename; __pyx_lineno = lineno; (void)__pyx_lineno; __pyx_clineno = __LINE__;
|
|
1211
|
+
{ __pyx_filename = __pyx_f[f_index]; (void)__pyx_filename; __pyx_lineno = lineno; (void)__pyx_lineno; __pyx_clineno = __LINE__; (void)__pyx_clineno; }
|
|
1177
1212
|
#define __PYX_ERR(f_index, lineno, Ln_error) \
|
|
1178
1213
|
{ __PYX_MARK_ERR_POS(f_index, lineno) goto Ln_error; }
|
|
1179
1214
|
|
|
@@ -1288,24 +1323,7 @@ static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*);
|
|
|
1288
1323
|
#define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s)
|
|
1289
1324
|
#define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s)
|
|
1290
1325
|
#define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s)
|
|
1291
|
-
#if CYTHON_COMPILING_IN_LIMITED_API
|
|
1292
|
-
static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const wchar_t *u)
|
|
1293
|
-
{
|
|
1294
|
-
const wchar_t *u_end = u;
|
|
1295
|
-
while (*u_end++) ;
|
|
1296
|
-
return (size_t)(u_end - u - 1);
|
|
1297
|
-
}
|
|
1298
|
-
#else
|
|
1299
|
-
static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
|
|
1300
|
-
{
|
|
1301
|
-
const Py_UNICODE *u_end = u;
|
|
1302
|
-
while (*u_end++) ;
|
|
1303
|
-
return (size_t)(u_end - u - 1);
|
|
1304
|
-
}
|
|
1305
|
-
#endif
|
|
1306
1326
|
#define __Pyx_PyUnicode_FromOrdinal(o) PyUnicode_FromOrdinal((int)o)
|
|
1307
|
-
#define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u))
|
|
1308
|
-
#define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode
|
|
1309
1327
|
#define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode
|
|
1310
1328
|
#define __Pyx_NewRef(obj) (Py_INCREF(obj), obj)
|
|
1311
1329
|
#define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None)
|
|
@@ -1355,7 +1373,7 @@ static CYTHON_INLINE Py_hash_t __Pyx_PyIndex_AsHash_t(PyObject*);
|
|
|
1355
1373
|
#endif
|
|
1356
1374
|
typedef Py_ssize_t __Pyx_compact_pylong;
|
|
1357
1375
|
typedef size_t __Pyx_compact_upylong;
|
|
1358
|
-
#else
|
|
1376
|
+
#else
|
|
1359
1377
|
#define __Pyx_PyLong_IsNeg(x) (Py_SIZE(x) < 0)
|
|
1360
1378
|
#define __Pyx_PyLong_IsNonNeg(x) (Py_SIZE(x) >= 0)
|
|
1361
1379
|
#define __Pyx_PyLong_IsZero(x) (Py_SIZE(x) == 0)
|
|
@@ -1645,7 +1663,7 @@ typedef struct {
|
|
|
1645
1663
|
|
|
1646
1664
|
/* #### Code section: numeric_typedefs ### */
|
|
1647
1665
|
|
|
1648
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1666
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":730
|
|
1649
1667
|
* # in Cython to enable them only on the right systems.
|
|
1650
1668
|
*
|
|
1651
1669
|
* ctypedef npy_int8 int8_t # <<<<<<<<<<<<<<
|
|
@@ -1654,7 +1672,7 @@ typedef struct {
|
|
|
1654
1672
|
*/
|
|
1655
1673
|
typedef npy_int8 __pyx_t_5numpy_int8_t;
|
|
1656
1674
|
|
|
1657
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1675
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":731
|
|
1658
1676
|
*
|
|
1659
1677
|
* ctypedef npy_int8 int8_t
|
|
1660
1678
|
* ctypedef npy_int16 int16_t # <<<<<<<<<<<<<<
|
|
@@ -1663,7 +1681,7 @@ typedef npy_int8 __pyx_t_5numpy_int8_t;
|
|
|
1663
1681
|
*/
|
|
1664
1682
|
typedef npy_int16 __pyx_t_5numpy_int16_t;
|
|
1665
1683
|
|
|
1666
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1684
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":732
|
|
1667
1685
|
* ctypedef npy_int8 int8_t
|
|
1668
1686
|
* ctypedef npy_int16 int16_t
|
|
1669
1687
|
* ctypedef npy_int32 int32_t # <<<<<<<<<<<<<<
|
|
@@ -1672,7 +1690,7 @@ typedef npy_int16 __pyx_t_5numpy_int16_t;
|
|
|
1672
1690
|
*/
|
|
1673
1691
|
typedef npy_int32 __pyx_t_5numpy_int32_t;
|
|
1674
1692
|
|
|
1675
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1693
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":733
|
|
1676
1694
|
* ctypedef npy_int16 int16_t
|
|
1677
1695
|
* ctypedef npy_int32 int32_t
|
|
1678
1696
|
* ctypedef npy_int64 int64_t # <<<<<<<<<<<<<<
|
|
@@ -1681,7 +1699,7 @@ typedef npy_int32 __pyx_t_5numpy_int32_t;
|
|
|
1681
1699
|
*/
|
|
1682
1700
|
typedef npy_int64 __pyx_t_5numpy_int64_t;
|
|
1683
1701
|
|
|
1684
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1702
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":737
|
|
1685
1703
|
* #ctypedef npy_int128 int128_t
|
|
1686
1704
|
*
|
|
1687
1705
|
* ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<<
|
|
@@ -1690,7 +1708,7 @@ typedef npy_int64 __pyx_t_5numpy_int64_t;
|
|
|
1690
1708
|
*/
|
|
1691
1709
|
typedef npy_uint8 __pyx_t_5numpy_uint8_t;
|
|
1692
1710
|
|
|
1693
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1711
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":738
|
|
1694
1712
|
*
|
|
1695
1713
|
* ctypedef npy_uint8 uint8_t
|
|
1696
1714
|
* ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<<
|
|
@@ -1699,7 +1717,7 @@ typedef npy_uint8 __pyx_t_5numpy_uint8_t;
|
|
|
1699
1717
|
*/
|
|
1700
1718
|
typedef npy_uint16 __pyx_t_5numpy_uint16_t;
|
|
1701
1719
|
|
|
1702
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1720
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":739
|
|
1703
1721
|
* ctypedef npy_uint8 uint8_t
|
|
1704
1722
|
* ctypedef npy_uint16 uint16_t
|
|
1705
1723
|
* ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<<
|
|
@@ -1708,7 +1726,7 @@ typedef npy_uint16 __pyx_t_5numpy_uint16_t;
|
|
|
1708
1726
|
*/
|
|
1709
1727
|
typedef npy_uint32 __pyx_t_5numpy_uint32_t;
|
|
1710
1728
|
|
|
1711
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1729
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":740
|
|
1712
1730
|
* ctypedef npy_uint16 uint16_t
|
|
1713
1731
|
* ctypedef npy_uint32 uint32_t
|
|
1714
1732
|
* ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<<
|
|
@@ -1717,7 +1735,7 @@ typedef npy_uint32 __pyx_t_5numpy_uint32_t;
|
|
|
1717
1735
|
*/
|
|
1718
1736
|
typedef npy_uint64 __pyx_t_5numpy_uint64_t;
|
|
1719
1737
|
|
|
1720
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1738
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":744
|
|
1721
1739
|
* #ctypedef npy_uint128 uint128_t
|
|
1722
1740
|
*
|
|
1723
1741
|
* ctypedef npy_float32 float32_t # <<<<<<<<<<<<<<
|
|
@@ -1726,7 +1744,7 @@ typedef npy_uint64 __pyx_t_5numpy_uint64_t;
|
|
|
1726
1744
|
*/
|
|
1727
1745
|
typedef npy_float32 __pyx_t_5numpy_float32_t;
|
|
1728
1746
|
|
|
1729
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1747
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":745
|
|
1730
1748
|
*
|
|
1731
1749
|
* ctypedef npy_float32 float32_t
|
|
1732
1750
|
* ctypedef npy_float64 float64_t # <<<<<<<<<<<<<<
|
|
@@ -1735,7 +1753,7 @@ typedef npy_float32 __pyx_t_5numpy_float32_t;
|
|
|
1735
1753
|
*/
|
|
1736
1754
|
typedef npy_float64 __pyx_t_5numpy_float64_t;
|
|
1737
1755
|
|
|
1738
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1756
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":754
|
|
1739
1757
|
* # The int types are mapped a bit surprising --
|
|
1740
1758
|
* # numpy.int corresponds to 'l' and numpy.long to 'q'
|
|
1741
1759
|
* ctypedef npy_long int_t # <<<<<<<<<<<<<<
|
|
@@ -1744,7 +1762,7 @@ typedef npy_float64 __pyx_t_5numpy_float64_t;
|
|
|
1744
1762
|
*/
|
|
1745
1763
|
typedef npy_long __pyx_t_5numpy_int_t;
|
|
1746
1764
|
|
|
1747
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1765
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":755
|
|
1748
1766
|
* # numpy.int corresponds to 'l' and numpy.long to 'q'
|
|
1749
1767
|
* ctypedef npy_long int_t
|
|
1750
1768
|
* ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<<
|
|
@@ -1753,7 +1771,7 @@ typedef npy_long __pyx_t_5numpy_int_t;
|
|
|
1753
1771
|
*/
|
|
1754
1772
|
typedef npy_longlong __pyx_t_5numpy_longlong_t;
|
|
1755
1773
|
|
|
1756
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1774
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":757
|
|
1757
1775
|
* ctypedef npy_longlong longlong_t
|
|
1758
1776
|
*
|
|
1759
1777
|
* ctypedef npy_ulong uint_t # <<<<<<<<<<<<<<
|
|
@@ -1762,7 +1780,7 @@ typedef npy_longlong __pyx_t_5numpy_longlong_t;
|
|
|
1762
1780
|
*/
|
|
1763
1781
|
typedef npy_ulong __pyx_t_5numpy_uint_t;
|
|
1764
1782
|
|
|
1765
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1783
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":758
|
|
1766
1784
|
*
|
|
1767
1785
|
* ctypedef npy_ulong uint_t
|
|
1768
1786
|
* ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<<
|
|
@@ -1771,7 +1789,7 @@ typedef npy_ulong __pyx_t_5numpy_uint_t;
|
|
|
1771
1789
|
*/
|
|
1772
1790
|
typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t;
|
|
1773
1791
|
|
|
1774
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1792
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":760
|
|
1775
1793
|
* ctypedef npy_ulonglong ulonglong_t
|
|
1776
1794
|
*
|
|
1777
1795
|
* ctypedef npy_intp intp_t # <<<<<<<<<<<<<<
|
|
@@ -1780,7 +1798,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t;
|
|
|
1780
1798
|
*/
|
|
1781
1799
|
typedef npy_intp __pyx_t_5numpy_intp_t;
|
|
1782
1800
|
|
|
1783
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1801
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":761
|
|
1784
1802
|
*
|
|
1785
1803
|
* ctypedef npy_intp intp_t
|
|
1786
1804
|
* ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<<
|
|
@@ -1789,7 +1807,7 @@ typedef npy_intp __pyx_t_5numpy_intp_t;
|
|
|
1789
1807
|
*/
|
|
1790
1808
|
typedef npy_uintp __pyx_t_5numpy_uintp_t;
|
|
1791
1809
|
|
|
1792
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1810
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":763
|
|
1793
1811
|
* ctypedef npy_uintp uintp_t
|
|
1794
1812
|
*
|
|
1795
1813
|
* ctypedef npy_double float_t # <<<<<<<<<<<<<<
|
|
@@ -1798,7 +1816,7 @@ typedef npy_uintp __pyx_t_5numpy_uintp_t;
|
|
|
1798
1816
|
*/
|
|
1799
1817
|
typedef npy_double __pyx_t_5numpy_float_t;
|
|
1800
1818
|
|
|
1801
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1819
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":764
|
|
1802
1820
|
*
|
|
1803
1821
|
* ctypedef npy_double float_t
|
|
1804
1822
|
* ctypedef npy_double double_t # <<<<<<<<<<<<<<
|
|
@@ -1807,7 +1825,7 @@ typedef npy_double __pyx_t_5numpy_float_t;
|
|
|
1807
1825
|
*/
|
|
1808
1826
|
typedef npy_double __pyx_t_5numpy_double_t;
|
|
1809
1827
|
|
|
1810
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1828
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":765
|
|
1811
1829
|
* ctypedef npy_double float_t
|
|
1812
1830
|
* ctypedef npy_double double_t
|
|
1813
1831
|
* ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<<
|
|
@@ -1902,7 +1920,7 @@ struct __pyx_MemviewEnum_obj;
|
|
|
1902
1920
|
struct __pyx_memoryview_obj;
|
|
1903
1921
|
struct __pyx_memoryviewslice_obj;
|
|
1904
1922
|
|
|
1905
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1923
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":767
|
|
1906
1924
|
* ctypedef npy_longdouble longdouble_t
|
|
1907
1925
|
*
|
|
1908
1926
|
* ctypedef npy_cfloat cfloat_t # <<<<<<<<<<<<<<
|
|
@@ -1911,7 +1929,7 @@ struct __pyx_memoryviewslice_obj;
|
|
|
1911
1929
|
*/
|
|
1912
1930
|
typedef npy_cfloat __pyx_t_5numpy_cfloat_t;
|
|
1913
1931
|
|
|
1914
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1932
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":768
|
|
1915
1933
|
*
|
|
1916
1934
|
* ctypedef npy_cfloat cfloat_t
|
|
1917
1935
|
* ctypedef npy_cdouble cdouble_t # <<<<<<<<<<<<<<
|
|
@@ -1920,7 +1938,7 @@ typedef npy_cfloat __pyx_t_5numpy_cfloat_t;
|
|
|
1920
1938
|
*/
|
|
1921
1939
|
typedef npy_cdouble __pyx_t_5numpy_cdouble_t;
|
|
1922
1940
|
|
|
1923
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1941
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":769
|
|
1924
1942
|
* ctypedef npy_cfloat cfloat_t
|
|
1925
1943
|
* ctypedef npy_cdouble cdouble_t
|
|
1926
1944
|
* ctypedef npy_clongdouble clongdouble_t # <<<<<<<<<<<<<<
|
|
@@ -1929,7 +1947,7 @@ typedef npy_cdouble __pyx_t_5numpy_cdouble_t;
|
|
|
1929
1947
|
*/
|
|
1930
1948
|
typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t;
|
|
1931
1949
|
|
|
1932
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
1950
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":771
|
|
1933
1951
|
* ctypedef npy_clongdouble clongdouble_t
|
|
1934
1952
|
*
|
|
1935
1953
|
* ctypedef npy_cdouble complex_t # <<<<<<<<<<<<<<
|
|
@@ -2294,8 +2312,8 @@ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int
|
|
|
2294
2312
|
#define __Pyx_Arg_NewRef_VARARGS(arg) __Pyx_NewRef(arg)
|
|
2295
2313
|
#define __Pyx_Arg_XDECREF_VARARGS(arg) Py_XDECREF(arg)
|
|
2296
2314
|
#else
|
|
2297
|
-
#define __Pyx_Arg_NewRef_VARARGS(arg) arg
|
|
2298
|
-
#define __Pyx_Arg_XDECREF_VARARGS(arg)
|
|
2315
|
+
#define __Pyx_Arg_NewRef_VARARGS(arg) arg
|
|
2316
|
+
#define __Pyx_Arg_XDECREF_VARARGS(arg)
|
|
2299
2317
|
#endif
|
|
2300
2318
|
#define __Pyx_NumKwargs_VARARGS(kwds) PyDict_Size(kwds)
|
|
2301
2319
|
#define __Pyx_KwValues_VARARGS(args, nargs) NULL
|
|
@@ -2311,8 +2329,9 @@ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int
|
|
|
2311
2329
|
#else
|
|
2312
2330
|
#define __Pyx_KwargsAsDict_FASTCALL(kw, kwvalues) _PyStack_AsDict(kwvalues, kw)
|
|
2313
2331
|
#endif
|
|
2314
|
-
#define __Pyx_Arg_NewRef_FASTCALL(arg) arg
|
|
2315
|
-
|
|
2332
|
+
#define __Pyx_Arg_NewRef_FASTCALL(arg) arg /* no-op, __Pyx_Arg_FASTCALL is direct and this needs
|
|
2333
|
+
to have the same reference counting */
|
|
2334
|
+
#define __Pyx_Arg_XDECREF_FASTCALL(arg)
|
|
2316
2335
|
#else
|
|
2317
2336
|
#define __Pyx_Arg_FASTCALL __Pyx_Arg_VARARGS
|
|
2318
2337
|
#define __Pyx_NumKwargs_FASTCALL __Pyx_NumKwargs_VARARGS
|
|
@@ -2948,22 +2967,22 @@ static int __Pyx_setup_reduce(PyObject* type_obj);
|
|
|
2948
2967
|
#endif
|
|
2949
2968
|
|
|
2950
2969
|
/* TypeImport.proto */
|
|
2951
|
-
#ifndef
|
|
2952
|
-
#define
|
|
2970
|
+
#ifndef __PYX_HAVE_RT_ImportType_proto_3_0_10
|
|
2971
|
+
#define __PYX_HAVE_RT_ImportType_proto_3_0_10
|
|
2953
2972
|
#if defined (__STDC_VERSION__) && __STDC_VERSION__ >= 201112L
|
|
2954
2973
|
#include <stdalign.h>
|
|
2955
2974
|
#endif
|
|
2956
2975
|
#if (defined (__STDC_VERSION__) && __STDC_VERSION__ >= 201112L) || __cplusplus >= 201103L
|
|
2957
|
-
#define
|
|
2976
|
+
#define __PYX_GET_STRUCT_ALIGNMENT_3_0_10(s) alignof(s)
|
|
2958
2977
|
#else
|
|
2959
|
-
#define
|
|
2978
|
+
#define __PYX_GET_STRUCT_ALIGNMENT_3_0_10(s) sizeof(void*)
|
|
2960
2979
|
#endif
|
|
2961
|
-
enum
|
|
2962
|
-
|
|
2963
|
-
|
|
2964
|
-
|
|
2980
|
+
enum __Pyx_ImportType_CheckSize_3_0_10 {
|
|
2981
|
+
__Pyx_ImportType_CheckSize_Error_3_0_10 = 0,
|
|
2982
|
+
__Pyx_ImportType_CheckSize_Warn_3_0_10 = 1,
|
|
2983
|
+
__Pyx_ImportType_CheckSize_Ignore_3_0_10 = 2
|
|
2965
2984
|
};
|
|
2966
|
-
static PyTypeObject *
|
|
2985
|
+
static PyTypeObject *__Pyx_ImportType_3_0_10(PyObject* module, const char *module_name, const char *class_name, size_t size, size_t alignment, enum __Pyx_ImportType_CheckSize_3_0_10 check_size);
|
|
2967
2986
|
#endif
|
|
2968
2987
|
|
|
2969
2988
|
/* FetchSharedCythonModule.proto */
|
|
@@ -3056,7 +3075,7 @@ typedef struct {
|
|
|
3056
3075
|
#endif
|
|
3057
3076
|
void *defaults;
|
|
3058
3077
|
int defaults_pyobjects;
|
|
3059
|
-
size_t defaults_size;
|
|
3078
|
+
size_t defaults_size;
|
|
3060
3079
|
int flags;
|
|
3061
3080
|
PyObject *defaults_tuple;
|
|
3062
3081
|
PyObject *defaults_kwdict;
|
|
@@ -3408,7 +3427,7 @@ static unsigned long __Pyx_get_runtime_version(void);
|
|
|
3408
3427
|
static int __Pyx_check_binary_version(unsigned long ct_version, unsigned long rt_version, int allow_newer);
|
|
3409
3428
|
|
|
3410
3429
|
/* FunctionImport.proto */
|
|
3411
|
-
static int
|
|
3430
|
+
static int __Pyx_ImportFunction_3_0_10(PyObject *module, const char *funcname, void (**f)(void), const char *sig);
|
|
3412
3431
|
|
|
3413
3432
|
/* InitStrings.proto */
|
|
3414
3433
|
static int __Pyx_InitStrings(__Pyx_StringTabEntry *t);
|
|
@@ -19069,7 +19088,7 @@ static PyObject *__pyx_unpickle_Enum__set_state(struct __pyx_MemviewEnum_obj *__
|
|
|
19069
19088
|
return __pyx_r;
|
|
19070
19089
|
}
|
|
19071
19090
|
|
|
19072
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19091
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":245
|
|
19073
19092
|
*
|
|
19074
19093
|
* @property
|
|
19075
19094
|
* cdef inline PyObject* base(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19080,7 +19099,7 @@ static PyObject *__pyx_unpickle_Enum__set_state(struct __pyx_MemviewEnum_obj *__
|
|
|
19080
19099
|
static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject *__pyx_v_self) {
|
|
19081
19100
|
PyObject *__pyx_r;
|
|
19082
19101
|
|
|
19083
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19102
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":248
|
|
19084
19103
|
* """Returns a borrowed reference to the object owning the data/memory.
|
|
19085
19104
|
* """
|
|
19086
19105
|
* return PyArray_BASE(self) # <<<<<<<<<<<<<<
|
|
@@ -19090,7 +19109,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject
|
|
|
19090
19109
|
__pyx_r = PyArray_BASE(__pyx_v_self);
|
|
19091
19110
|
goto __pyx_L0;
|
|
19092
19111
|
|
|
19093
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19112
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":245
|
|
19094
19113
|
*
|
|
19095
19114
|
* @property
|
|
19096
19115
|
* cdef inline PyObject* base(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19103,7 +19122,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject
|
|
|
19103
19122
|
return __pyx_r;
|
|
19104
19123
|
}
|
|
19105
19124
|
|
|
19106
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19125
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":251
|
|
19107
19126
|
*
|
|
19108
19127
|
* @property
|
|
19109
19128
|
* cdef inline dtype descr(self): # <<<<<<<<<<<<<<
|
|
@@ -19117,7 +19136,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
|
|
|
19117
19136
|
PyArray_Descr *__pyx_t_1;
|
|
19118
19137
|
__Pyx_RefNannySetupContext("descr", 1);
|
|
19119
19138
|
|
|
19120
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19139
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":254
|
|
19121
19140
|
* """Returns an owned reference to the dtype of the array.
|
|
19122
19141
|
* """
|
|
19123
19142
|
* return <dtype>PyArray_DESCR(self) # <<<<<<<<<<<<<<
|
|
@@ -19130,7 +19149,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
|
|
|
19130
19149
|
__pyx_r = ((PyArray_Descr *)__pyx_t_1);
|
|
19131
19150
|
goto __pyx_L0;
|
|
19132
19151
|
|
|
19133
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19152
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":251
|
|
19134
19153
|
*
|
|
19135
19154
|
* @property
|
|
19136
19155
|
* cdef inline dtype descr(self): # <<<<<<<<<<<<<<
|
|
@@ -19145,7 +19164,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
|
|
|
19145
19164
|
return __pyx_r;
|
|
19146
19165
|
}
|
|
19147
19166
|
|
|
19148
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19167
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":257
|
|
19149
19168
|
*
|
|
19150
19169
|
* @property
|
|
19151
19170
|
* cdef inline int ndim(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19156,7 +19175,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
|
|
|
19156
19175
|
static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx_v_self) {
|
|
19157
19176
|
int __pyx_r;
|
|
19158
19177
|
|
|
19159
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19178
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":260
|
|
19160
19179
|
* """Returns the number of dimensions in the array.
|
|
19161
19180
|
* """
|
|
19162
19181
|
* return PyArray_NDIM(self) # <<<<<<<<<<<<<<
|
|
@@ -19166,7 +19185,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx
|
|
|
19166
19185
|
__pyx_r = PyArray_NDIM(__pyx_v_self);
|
|
19167
19186
|
goto __pyx_L0;
|
|
19168
19187
|
|
|
19169
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19188
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":257
|
|
19170
19189
|
*
|
|
19171
19190
|
* @property
|
|
19172
19191
|
* cdef inline int ndim(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19179,7 +19198,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx
|
|
|
19179
19198
|
return __pyx_r;
|
|
19180
19199
|
}
|
|
19181
19200
|
|
|
19182
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19201
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":263
|
|
19183
19202
|
*
|
|
19184
19203
|
* @property
|
|
19185
19204
|
* cdef inline npy_intp *shape(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19190,7 +19209,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx
|
|
|
19190
19209
|
static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObject *__pyx_v_self) {
|
|
19191
19210
|
npy_intp *__pyx_r;
|
|
19192
19211
|
|
|
19193
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19212
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":268
|
|
19194
19213
|
* Can return NULL for 0-dimensional arrays.
|
|
19195
19214
|
* """
|
|
19196
19215
|
* return PyArray_DIMS(self) # <<<<<<<<<<<<<<
|
|
@@ -19200,7 +19219,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObjec
|
|
|
19200
19219
|
__pyx_r = PyArray_DIMS(__pyx_v_self);
|
|
19201
19220
|
goto __pyx_L0;
|
|
19202
19221
|
|
|
19203
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19222
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":263
|
|
19204
19223
|
*
|
|
19205
19224
|
* @property
|
|
19206
19225
|
* cdef inline npy_intp *shape(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19213,7 +19232,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObjec
|
|
|
19213
19232
|
return __pyx_r;
|
|
19214
19233
|
}
|
|
19215
19234
|
|
|
19216
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19235
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":271
|
|
19217
19236
|
*
|
|
19218
19237
|
* @property
|
|
19219
19238
|
* cdef inline npy_intp *strides(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19224,7 +19243,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObjec
|
|
|
19224
19243
|
static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayObject *__pyx_v_self) {
|
|
19225
19244
|
npy_intp *__pyx_r;
|
|
19226
19245
|
|
|
19227
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19246
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":275
|
|
19228
19247
|
* The number of elements matches the number of dimensions of the array (ndim).
|
|
19229
19248
|
* """
|
|
19230
19249
|
* return PyArray_STRIDES(self) # <<<<<<<<<<<<<<
|
|
@@ -19234,7 +19253,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayO
|
|
|
19234
19253
|
__pyx_r = PyArray_STRIDES(__pyx_v_self);
|
|
19235
19254
|
goto __pyx_L0;
|
|
19236
19255
|
|
|
19237
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19256
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":271
|
|
19238
19257
|
*
|
|
19239
19258
|
* @property
|
|
19240
19259
|
* cdef inline npy_intp *strides(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19247,7 +19266,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayO
|
|
|
19247
19266
|
return __pyx_r;
|
|
19248
19267
|
}
|
|
19249
19268
|
|
|
19250
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19269
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":278
|
|
19251
19270
|
*
|
|
19252
19271
|
* @property
|
|
19253
19272
|
* cdef inline npy_intp size(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19258,7 +19277,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayO
|
|
|
19258
19277
|
static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *__pyx_v_self) {
|
|
19259
19278
|
npy_intp __pyx_r;
|
|
19260
19279
|
|
|
19261
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19280
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":281
|
|
19262
19281
|
* """Returns the total size (in number of elements) of the array.
|
|
19263
19282
|
* """
|
|
19264
19283
|
* return PyArray_SIZE(self) # <<<<<<<<<<<<<<
|
|
@@ -19268,7 +19287,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *
|
|
|
19268
19287
|
__pyx_r = PyArray_SIZE(__pyx_v_self);
|
|
19269
19288
|
goto __pyx_L0;
|
|
19270
19289
|
|
|
19271
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19290
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":278
|
|
19272
19291
|
*
|
|
19273
19292
|
* @property
|
|
19274
19293
|
* cdef inline npy_intp size(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19281,7 +19300,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *
|
|
|
19281
19300
|
return __pyx_r;
|
|
19282
19301
|
}
|
|
19283
19302
|
|
|
19284
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19303
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":284
|
|
19285
19304
|
*
|
|
19286
19305
|
* @property
|
|
19287
19306
|
* cdef inline char* data(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19292,7 +19311,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *
|
|
|
19292
19311
|
static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__pyx_v_self) {
|
|
19293
19312
|
char *__pyx_r;
|
|
19294
19313
|
|
|
19295
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19314
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":290
|
|
19296
19315
|
* of `PyArray_DATA()` instead, which returns a 'void*'.
|
|
19297
19316
|
* """
|
|
19298
19317
|
* return PyArray_BYTES(self) # <<<<<<<<<<<<<<
|
|
@@ -19302,7 +19321,7 @@ static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__p
|
|
|
19302
19321
|
__pyx_r = PyArray_BYTES(__pyx_v_self);
|
|
19303
19322
|
goto __pyx_L0;
|
|
19304
19323
|
|
|
19305
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19324
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":284
|
|
19306
19325
|
*
|
|
19307
19326
|
* @property
|
|
19308
19327
|
* cdef inline char* data(self) nogil: # <<<<<<<<<<<<<<
|
|
@@ -19315,7 +19334,7 @@ static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__p
|
|
|
19315
19334
|
return __pyx_r;
|
|
19316
19335
|
}
|
|
19317
19336
|
|
|
19318
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19337
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":773
|
|
19319
19338
|
* ctypedef npy_cdouble complex_t
|
|
19320
19339
|
*
|
|
19321
19340
|
* cdef inline object PyArray_MultiIterNew1(a): # <<<<<<<<<<<<<<
|
|
@@ -19332,7 +19351,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__
|
|
|
19332
19351
|
int __pyx_clineno = 0;
|
|
19333
19352
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew1", 1);
|
|
19334
19353
|
|
|
19335
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19354
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":774
|
|
19336
19355
|
*
|
|
19337
19356
|
* cdef inline object PyArray_MultiIterNew1(a):
|
|
19338
19357
|
* return PyArray_MultiIterNew(1, <void*>a) # <<<<<<<<<<<<<<
|
|
@@ -19346,7 +19365,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__
|
|
|
19346
19365
|
__pyx_t_1 = 0;
|
|
19347
19366
|
goto __pyx_L0;
|
|
19348
19367
|
|
|
19349
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19368
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":773
|
|
19350
19369
|
* ctypedef npy_cdouble complex_t
|
|
19351
19370
|
*
|
|
19352
19371
|
* cdef inline object PyArray_MultiIterNew1(a): # <<<<<<<<<<<<<<
|
|
@@ -19365,7 +19384,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__
|
|
|
19365
19384
|
return __pyx_r;
|
|
19366
19385
|
}
|
|
19367
19386
|
|
|
19368
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19387
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":776
|
|
19369
19388
|
* return PyArray_MultiIterNew(1, <void*>a)
|
|
19370
19389
|
*
|
|
19371
19390
|
* cdef inline object PyArray_MultiIterNew2(a, b): # <<<<<<<<<<<<<<
|
|
@@ -19382,7 +19401,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__
|
|
|
19382
19401
|
int __pyx_clineno = 0;
|
|
19383
19402
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew2", 1);
|
|
19384
19403
|
|
|
19385
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19404
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":777
|
|
19386
19405
|
*
|
|
19387
19406
|
* cdef inline object PyArray_MultiIterNew2(a, b):
|
|
19388
19407
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b) # <<<<<<<<<<<<<<
|
|
@@ -19396,7 +19415,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__
|
|
|
19396
19415
|
__pyx_t_1 = 0;
|
|
19397
19416
|
goto __pyx_L0;
|
|
19398
19417
|
|
|
19399
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19418
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":776
|
|
19400
19419
|
* return PyArray_MultiIterNew(1, <void*>a)
|
|
19401
19420
|
*
|
|
19402
19421
|
* cdef inline object PyArray_MultiIterNew2(a, b): # <<<<<<<<<<<<<<
|
|
@@ -19415,7 +19434,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__
|
|
|
19415
19434
|
return __pyx_r;
|
|
19416
19435
|
}
|
|
19417
19436
|
|
|
19418
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19437
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":779
|
|
19419
19438
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b)
|
|
19420
19439
|
*
|
|
19421
19440
|
* cdef inline object PyArray_MultiIterNew3(a, b, c): # <<<<<<<<<<<<<<
|
|
@@ -19432,7 +19451,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__
|
|
|
19432
19451
|
int __pyx_clineno = 0;
|
|
19433
19452
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew3", 1);
|
|
19434
19453
|
|
|
19435
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19454
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":780
|
|
19436
19455
|
*
|
|
19437
19456
|
* cdef inline object PyArray_MultiIterNew3(a, b, c):
|
|
19438
19457
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c) # <<<<<<<<<<<<<<
|
|
@@ -19446,7 +19465,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__
|
|
|
19446
19465
|
__pyx_t_1 = 0;
|
|
19447
19466
|
goto __pyx_L0;
|
|
19448
19467
|
|
|
19449
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19468
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":779
|
|
19450
19469
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b)
|
|
19451
19470
|
*
|
|
19452
19471
|
* cdef inline object PyArray_MultiIterNew3(a, b, c): # <<<<<<<<<<<<<<
|
|
@@ -19465,7 +19484,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__
|
|
|
19465
19484
|
return __pyx_r;
|
|
19466
19485
|
}
|
|
19467
19486
|
|
|
19468
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19487
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":782
|
|
19469
19488
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
|
|
19470
19489
|
*
|
|
19471
19490
|
* cdef inline object PyArray_MultiIterNew4(a, b, c, d): # <<<<<<<<<<<<<<
|
|
@@ -19482,7 +19501,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__
|
|
|
19482
19501
|
int __pyx_clineno = 0;
|
|
19483
19502
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew4", 1);
|
|
19484
19503
|
|
|
19485
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19504
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":783
|
|
19486
19505
|
*
|
|
19487
19506
|
* cdef inline object PyArray_MultiIterNew4(a, b, c, d):
|
|
19488
19507
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d) # <<<<<<<<<<<<<<
|
|
@@ -19496,7 +19515,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__
|
|
|
19496
19515
|
__pyx_t_1 = 0;
|
|
19497
19516
|
goto __pyx_L0;
|
|
19498
19517
|
|
|
19499
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19518
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":782
|
|
19500
19519
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
|
|
19501
19520
|
*
|
|
19502
19521
|
* cdef inline object PyArray_MultiIterNew4(a, b, c, d): # <<<<<<<<<<<<<<
|
|
@@ -19515,7 +19534,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__
|
|
|
19515
19534
|
return __pyx_r;
|
|
19516
19535
|
}
|
|
19517
19536
|
|
|
19518
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19537
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":785
|
|
19519
19538
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
|
|
19520
19539
|
*
|
|
19521
19540
|
* cdef inline object PyArray_MultiIterNew5(a, b, c, d, e): # <<<<<<<<<<<<<<
|
|
@@ -19532,7 +19551,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__
|
|
|
19532
19551
|
int __pyx_clineno = 0;
|
|
19533
19552
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew5", 1);
|
|
19534
19553
|
|
|
19535
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19554
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":786
|
|
19536
19555
|
*
|
|
19537
19556
|
* cdef inline object PyArray_MultiIterNew5(a, b, c, d, e):
|
|
19538
19557
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e) # <<<<<<<<<<<<<<
|
|
@@ -19546,7 +19565,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__
|
|
|
19546
19565
|
__pyx_t_1 = 0;
|
|
19547
19566
|
goto __pyx_L0;
|
|
19548
19567
|
|
|
19549
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19568
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":785
|
|
19550
19569
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
|
|
19551
19570
|
*
|
|
19552
19571
|
* cdef inline object PyArray_MultiIterNew5(a, b, c, d, e): # <<<<<<<<<<<<<<
|
|
@@ -19565,7 +19584,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__
|
|
|
19565
19584
|
return __pyx_r;
|
|
19566
19585
|
}
|
|
19567
19586
|
|
|
19568
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19587
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":788
|
|
19569
19588
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
|
|
19570
19589
|
*
|
|
19571
19590
|
* cdef inline tuple PyDataType_SHAPE(dtype d): # <<<<<<<<<<<<<<
|
|
@@ -19579,7 +19598,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
19579
19598
|
int __pyx_t_1;
|
|
19580
19599
|
__Pyx_RefNannySetupContext("PyDataType_SHAPE", 1);
|
|
19581
19600
|
|
|
19582
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19601
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":789
|
|
19583
19602
|
*
|
|
19584
19603
|
* cdef inline tuple PyDataType_SHAPE(dtype d):
|
|
19585
19604
|
* if PyDataType_HASSUBARRAY(d): # <<<<<<<<<<<<<<
|
|
@@ -19589,7 +19608,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
19589
19608
|
__pyx_t_1 = PyDataType_HASSUBARRAY(__pyx_v_d);
|
|
19590
19609
|
if (__pyx_t_1) {
|
|
19591
19610
|
|
|
19592
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19611
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":790
|
|
19593
19612
|
* cdef inline tuple PyDataType_SHAPE(dtype d):
|
|
19594
19613
|
* if PyDataType_HASSUBARRAY(d):
|
|
19595
19614
|
* return <tuple>d.subarray.shape # <<<<<<<<<<<<<<
|
|
@@ -19601,7 +19620,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
19601
19620
|
__pyx_r = ((PyObject*)__pyx_v_d->subarray->shape);
|
|
19602
19621
|
goto __pyx_L0;
|
|
19603
19622
|
|
|
19604
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19623
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":789
|
|
19605
19624
|
*
|
|
19606
19625
|
* cdef inline tuple PyDataType_SHAPE(dtype d):
|
|
19607
19626
|
* if PyDataType_HASSUBARRAY(d): # <<<<<<<<<<<<<<
|
|
@@ -19610,7 +19629,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
19610
19629
|
*/
|
|
19611
19630
|
}
|
|
19612
19631
|
|
|
19613
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19632
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":792
|
|
19614
19633
|
* return <tuple>d.subarray.shape
|
|
19615
19634
|
* else:
|
|
19616
19635
|
* return () # <<<<<<<<<<<<<<
|
|
@@ -19624,7 +19643,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
19624
19643
|
goto __pyx_L0;
|
|
19625
19644
|
}
|
|
19626
19645
|
|
|
19627
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19646
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":788
|
|
19628
19647
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
|
|
19629
19648
|
*
|
|
19630
19649
|
* cdef inline tuple PyDataType_SHAPE(dtype d): # <<<<<<<<<<<<<<
|
|
@@ -19639,7 +19658,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
|
|
|
19639
19658
|
return __pyx_r;
|
|
19640
19659
|
}
|
|
19641
19660
|
|
|
19642
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19661
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":968
|
|
19643
19662
|
* int _import_umath() except -1
|
|
19644
19663
|
*
|
|
19645
19664
|
* cdef inline void set_array_base(ndarray arr, object base): # <<<<<<<<<<<<<<
|
|
@@ -19653,7 +19672,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
|
|
|
19653
19672
|
const char *__pyx_filename = NULL;
|
|
19654
19673
|
int __pyx_clineno = 0;
|
|
19655
19674
|
|
|
19656
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19675
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":969
|
|
19657
19676
|
*
|
|
19658
19677
|
* cdef inline void set_array_base(ndarray arr, object base):
|
|
19659
19678
|
* Py_INCREF(base) # important to do this before stealing the reference below! # <<<<<<<<<<<<<<
|
|
@@ -19662,7 +19681,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
|
|
|
19662
19681
|
*/
|
|
19663
19682
|
Py_INCREF(__pyx_v_base);
|
|
19664
19683
|
|
|
19665
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19684
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":970
|
|
19666
19685
|
* cdef inline void set_array_base(ndarray arr, object base):
|
|
19667
19686
|
* Py_INCREF(base) # important to do this before stealing the reference below!
|
|
19668
19687
|
* PyArray_SetBaseObject(arr, base) # <<<<<<<<<<<<<<
|
|
@@ -19671,7 +19690,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
|
|
|
19671
19690
|
*/
|
|
19672
19691
|
__pyx_t_1 = PyArray_SetBaseObject(__pyx_v_arr, __pyx_v_base); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(2, 970, __pyx_L1_error)
|
|
19673
19692
|
|
|
19674
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19693
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":968
|
|
19675
19694
|
* int _import_umath() except -1
|
|
19676
19695
|
*
|
|
19677
19696
|
* cdef inline void set_array_base(ndarray arr, object base): # <<<<<<<<<<<<<<
|
|
@@ -19686,7 +19705,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
|
|
|
19686
19705
|
__pyx_L0:;
|
|
19687
19706
|
}
|
|
19688
19707
|
|
|
19689
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19708
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":972
|
|
19690
19709
|
* PyArray_SetBaseObject(arr, base)
|
|
19691
19710
|
*
|
|
19692
19711
|
* cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<<
|
|
@@ -19701,7 +19720,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
19701
19720
|
int __pyx_t_1;
|
|
19702
19721
|
__Pyx_RefNannySetupContext("get_array_base", 1);
|
|
19703
19722
|
|
|
19704
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19723
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":973
|
|
19705
19724
|
*
|
|
19706
19725
|
* cdef inline object get_array_base(ndarray arr):
|
|
19707
19726
|
* base = PyArray_BASE(arr) # <<<<<<<<<<<<<<
|
|
@@ -19710,7 +19729,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
19710
19729
|
*/
|
|
19711
19730
|
__pyx_v_base = PyArray_BASE(__pyx_v_arr);
|
|
19712
19731
|
|
|
19713
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19732
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":974
|
|
19714
19733
|
* cdef inline object get_array_base(ndarray arr):
|
|
19715
19734
|
* base = PyArray_BASE(arr)
|
|
19716
19735
|
* if base is NULL: # <<<<<<<<<<<<<<
|
|
@@ -19720,7 +19739,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
19720
19739
|
__pyx_t_1 = (__pyx_v_base == NULL);
|
|
19721
19740
|
if (__pyx_t_1) {
|
|
19722
19741
|
|
|
19723
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19742
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":975
|
|
19724
19743
|
* base = PyArray_BASE(arr)
|
|
19725
19744
|
* if base is NULL:
|
|
19726
19745
|
* return None # <<<<<<<<<<<<<<
|
|
@@ -19731,7 +19750,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
19731
19750
|
__pyx_r = Py_None; __Pyx_INCREF(Py_None);
|
|
19732
19751
|
goto __pyx_L0;
|
|
19733
19752
|
|
|
19734
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19753
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":974
|
|
19735
19754
|
* cdef inline object get_array_base(ndarray arr):
|
|
19736
19755
|
* base = PyArray_BASE(arr)
|
|
19737
19756
|
* if base is NULL: # <<<<<<<<<<<<<<
|
|
@@ -19740,7 +19759,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
19740
19759
|
*/
|
|
19741
19760
|
}
|
|
19742
19761
|
|
|
19743
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19762
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":976
|
|
19744
19763
|
* if base is NULL:
|
|
19745
19764
|
* return None
|
|
19746
19765
|
* return <object>base # <<<<<<<<<<<<<<
|
|
@@ -19752,7 +19771,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
19752
19771
|
__pyx_r = ((PyObject *)__pyx_v_base);
|
|
19753
19772
|
goto __pyx_L0;
|
|
19754
19773
|
|
|
19755
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19774
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":972
|
|
19756
19775
|
* PyArray_SetBaseObject(arr, base)
|
|
19757
19776
|
*
|
|
19758
19777
|
* cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<<
|
|
@@ -19767,7 +19786,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
|
|
|
19767
19786
|
return __pyx_r;
|
|
19768
19787
|
}
|
|
19769
19788
|
|
|
19770
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19789
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":980
|
|
19771
19790
|
* # Versions of the import_* functions which are more suitable for
|
|
19772
19791
|
* # Cython code.
|
|
19773
19792
|
* cdef inline int import_array() except -1: # <<<<<<<<<<<<<<
|
|
@@ -19791,7 +19810,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
19791
19810
|
int __pyx_clineno = 0;
|
|
19792
19811
|
__Pyx_RefNannySetupContext("import_array", 1);
|
|
19793
19812
|
|
|
19794
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19813
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":981
|
|
19795
19814
|
* # Cython code.
|
|
19796
19815
|
* cdef inline int import_array() except -1:
|
|
19797
19816
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -19807,7 +19826,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
19807
19826
|
__Pyx_XGOTREF(__pyx_t_3);
|
|
19808
19827
|
/*try:*/ {
|
|
19809
19828
|
|
|
19810
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19829
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":982
|
|
19811
19830
|
* cdef inline int import_array() except -1:
|
|
19812
19831
|
* try:
|
|
19813
19832
|
* __pyx_import_array() # <<<<<<<<<<<<<<
|
|
@@ -19816,7 +19835,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
19816
19835
|
*/
|
|
19817
19836
|
__pyx_t_4 = _import_array(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(2, 982, __pyx_L3_error)
|
|
19818
19837
|
|
|
19819
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19838
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":981
|
|
19820
19839
|
* # Cython code.
|
|
19821
19840
|
* cdef inline int import_array() except -1:
|
|
19822
19841
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -19830,7 +19849,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
19830
19849
|
goto __pyx_L8_try_end;
|
|
19831
19850
|
__pyx_L3_error:;
|
|
19832
19851
|
|
|
19833
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19852
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":983
|
|
19834
19853
|
* try:
|
|
19835
19854
|
* __pyx_import_array()
|
|
19836
19855
|
* except Exception: # <<<<<<<<<<<<<<
|
|
@@ -19845,7 +19864,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
19845
19864
|
__Pyx_XGOTREF(__pyx_t_6);
|
|
19846
19865
|
__Pyx_XGOTREF(__pyx_t_7);
|
|
19847
19866
|
|
|
19848
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19867
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":984
|
|
19849
19868
|
* __pyx_import_array()
|
|
19850
19869
|
* except Exception:
|
|
19851
19870
|
* raise ImportError("numpy.core.multiarray failed to import") # <<<<<<<<<<<<<<
|
|
@@ -19860,7 +19879,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
19860
19879
|
}
|
|
19861
19880
|
goto __pyx_L5_except_error;
|
|
19862
19881
|
|
|
19863
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19882
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":981
|
|
19864
19883
|
* # Cython code.
|
|
19865
19884
|
* cdef inline int import_array() except -1:
|
|
19866
19885
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -19876,7 +19895,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
19876
19895
|
__pyx_L8_try_end:;
|
|
19877
19896
|
}
|
|
19878
19897
|
|
|
19879
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19898
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":980
|
|
19880
19899
|
* # Versions of the import_* functions which are more suitable for
|
|
19881
19900
|
* # Cython code.
|
|
19882
19901
|
* cdef inline int import_array() except -1: # <<<<<<<<<<<<<<
|
|
@@ -19899,7 +19918,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
|
|
|
19899
19918
|
return __pyx_r;
|
|
19900
19919
|
}
|
|
19901
19920
|
|
|
19902
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19921
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":986
|
|
19903
19922
|
* raise ImportError("numpy.core.multiarray failed to import")
|
|
19904
19923
|
*
|
|
19905
19924
|
* cdef inline int import_umath() except -1: # <<<<<<<<<<<<<<
|
|
@@ -19923,7 +19942,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
19923
19942
|
int __pyx_clineno = 0;
|
|
19924
19943
|
__Pyx_RefNannySetupContext("import_umath", 1);
|
|
19925
19944
|
|
|
19926
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19945
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":987
|
|
19927
19946
|
*
|
|
19928
19947
|
* cdef inline int import_umath() except -1:
|
|
19929
19948
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -19939,7 +19958,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
19939
19958
|
__Pyx_XGOTREF(__pyx_t_3);
|
|
19940
19959
|
/*try:*/ {
|
|
19941
19960
|
|
|
19942
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19961
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":988
|
|
19943
19962
|
* cdef inline int import_umath() except -1:
|
|
19944
19963
|
* try:
|
|
19945
19964
|
* _import_umath() # <<<<<<<<<<<<<<
|
|
@@ -19948,7 +19967,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
19948
19967
|
*/
|
|
19949
19968
|
__pyx_t_4 = _import_umath(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(2, 988, __pyx_L3_error)
|
|
19950
19969
|
|
|
19951
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19970
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":987
|
|
19952
19971
|
*
|
|
19953
19972
|
* cdef inline int import_umath() except -1:
|
|
19954
19973
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -19962,7 +19981,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
19962
19981
|
goto __pyx_L8_try_end;
|
|
19963
19982
|
__pyx_L3_error:;
|
|
19964
19983
|
|
|
19965
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19984
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":989
|
|
19966
19985
|
* try:
|
|
19967
19986
|
* _import_umath()
|
|
19968
19987
|
* except Exception: # <<<<<<<<<<<<<<
|
|
@@ -19977,7 +19996,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
19977
19996
|
__Pyx_XGOTREF(__pyx_t_6);
|
|
19978
19997
|
__Pyx_XGOTREF(__pyx_t_7);
|
|
19979
19998
|
|
|
19980
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
19999
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":990
|
|
19981
20000
|
* _import_umath()
|
|
19982
20001
|
* except Exception:
|
|
19983
20002
|
* raise ImportError("numpy.core.umath failed to import") # <<<<<<<<<<<<<<
|
|
@@ -19992,7 +20011,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
19992
20011
|
}
|
|
19993
20012
|
goto __pyx_L5_except_error;
|
|
19994
20013
|
|
|
19995
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20014
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":987
|
|
19996
20015
|
*
|
|
19997
20016
|
* cdef inline int import_umath() except -1:
|
|
19998
20017
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -20008,7 +20027,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
20008
20027
|
__pyx_L8_try_end:;
|
|
20009
20028
|
}
|
|
20010
20029
|
|
|
20011
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20030
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":986
|
|
20012
20031
|
* raise ImportError("numpy.core.multiarray failed to import")
|
|
20013
20032
|
*
|
|
20014
20033
|
* cdef inline int import_umath() except -1: # <<<<<<<<<<<<<<
|
|
@@ -20031,7 +20050,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
|
|
|
20031
20050
|
return __pyx_r;
|
|
20032
20051
|
}
|
|
20033
20052
|
|
|
20034
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20053
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":992
|
|
20035
20054
|
* raise ImportError("numpy.core.umath failed to import")
|
|
20036
20055
|
*
|
|
20037
20056
|
* cdef inline int import_ufunc() except -1: # <<<<<<<<<<<<<<
|
|
@@ -20055,7 +20074,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
20055
20074
|
int __pyx_clineno = 0;
|
|
20056
20075
|
__Pyx_RefNannySetupContext("import_ufunc", 1);
|
|
20057
20076
|
|
|
20058
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20077
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":993
|
|
20059
20078
|
*
|
|
20060
20079
|
* cdef inline int import_ufunc() except -1:
|
|
20061
20080
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -20071,7 +20090,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
20071
20090
|
__Pyx_XGOTREF(__pyx_t_3);
|
|
20072
20091
|
/*try:*/ {
|
|
20073
20092
|
|
|
20074
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20093
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":994
|
|
20075
20094
|
* cdef inline int import_ufunc() except -1:
|
|
20076
20095
|
* try:
|
|
20077
20096
|
* _import_umath() # <<<<<<<<<<<<<<
|
|
@@ -20080,7 +20099,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
20080
20099
|
*/
|
|
20081
20100
|
__pyx_t_4 = _import_umath(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(2, 994, __pyx_L3_error)
|
|
20082
20101
|
|
|
20083
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20102
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":993
|
|
20084
20103
|
*
|
|
20085
20104
|
* cdef inline int import_ufunc() except -1:
|
|
20086
20105
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -20094,7 +20113,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
20094
20113
|
goto __pyx_L8_try_end;
|
|
20095
20114
|
__pyx_L3_error:;
|
|
20096
20115
|
|
|
20097
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20116
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":995
|
|
20098
20117
|
* try:
|
|
20099
20118
|
* _import_umath()
|
|
20100
20119
|
* except Exception: # <<<<<<<<<<<<<<
|
|
@@ -20109,7 +20128,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
20109
20128
|
__Pyx_XGOTREF(__pyx_t_6);
|
|
20110
20129
|
__Pyx_XGOTREF(__pyx_t_7);
|
|
20111
20130
|
|
|
20112
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20131
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":996
|
|
20113
20132
|
* _import_umath()
|
|
20114
20133
|
* except Exception:
|
|
20115
20134
|
* raise ImportError("numpy.core.umath failed to import") # <<<<<<<<<<<<<<
|
|
@@ -20124,7 +20143,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
20124
20143
|
}
|
|
20125
20144
|
goto __pyx_L5_except_error;
|
|
20126
20145
|
|
|
20127
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20146
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":993
|
|
20128
20147
|
*
|
|
20129
20148
|
* cdef inline int import_ufunc() except -1:
|
|
20130
20149
|
* try: # <<<<<<<<<<<<<<
|
|
@@ -20140,7 +20159,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
20140
20159
|
__pyx_L8_try_end:;
|
|
20141
20160
|
}
|
|
20142
20161
|
|
|
20143
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20162
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":992
|
|
20144
20163
|
* raise ImportError("numpy.core.umath failed to import")
|
|
20145
20164
|
*
|
|
20146
20165
|
* cdef inline int import_ufunc() except -1: # <<<<<<<<<<<<<<
|
|
@@ -20163,7 +20182,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
20163
20182
|
return __pyx_r;
|
|
20164
20183
|
}
|
|
20165
20184
|
|
|
20166
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20185
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":999
|
|
20167
20186
|
*
|
|
20168
20187
|
*
|
|
20169
20188
|
* cdef inline bint is_timedelta64_object(object obj): # <<<<<<<<<<<<<<
|
|
@@ -20174,7 +20193,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
|
|
|
20174
20193
|
static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_obj) {
|
|
20175
20194
|
int __pyx_r;
|
|
20176
20195
|
|
|
20177
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20196
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1011
|
|
20178
20197
|
* bool
|
|
20179
20198
|
* """
|
|
20180
20199
|
* return PyObject_TypeCheck(obj, &PyTimedeltaArrType_Type) # <<<<<<<<<<<<<<
|
|
@@ -20184,7 +20203,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_
|
|
|
20184
20203
|
__pyx_r = PyObject_TypeCheck(__pyx_v_obj, (&PyTimedeltaArrType_Type));
|
|
20185
20204
|
goto __pyx_L0;
|
|
20186
20205
|
|
|
20187
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20206
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":999
|
|
20188
20207
|
*
|
|
20189
20208
|
*
|
|
20190
20209
|
* cdef inline bint is_timedelta64_object(object obj): # <<<<<<<<<<<<<<
|
|
@@ -20197,7 +20216,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_
|
|
|
20197
20216
|
return __pyx_r;
|
|
20198
20217
|
}
|
|
20199
20218
|
|
|
20200
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20219
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1014
|
|
20201
20220
|
*
|
|
20202
20221
|
*
|
|
20203
20222
|
* cdef inline bint is_datetime64_object(object obj): # <<<<<<<<<<<<<<
|
|
@@ -20208,7 +20227,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_
|
|
|
20208
20227
|
static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_obj) {
|
|
20209
20228
|
int __pyx_r;
|
|
20210
20229
|
|
|
20211
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20230
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1026
|
|
20212
20231
|
* bool
|
|
20213
20232
|
* """
|
|
20214
20233
|
* return PyObject_TypeCheck(obj, &PyDatetimeArrType_Type) # <<<<<<<<<<<<<<
|
|
@@ -20218,7 +20237,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_o
|
|
|
20218
20237
|
__pyx_r = PyObject_TypeCheck(__pyx_v_obj, (&PyDatetimeArrType_Type));
|
|
20219
20238
|
goto __pyx_L0;
|
|
20220
20239
|
|
|
20221
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20240
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1014
|
|
20222
20241
|
*
|
|
20223
20242
|
*
|
|
20224
20243
|
* cdef inline bint is_datetime64_object(object obj): # <<<<<<<<<<<<<<
|
|
@@ -20231,7 +20250,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_o
|
|
|
20231
20250
|
return __pyx_r;
|
|
20232
20251
|
}
|
|
20233
20252
|
|
|
20234
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20253
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1029
|
|
20235
20254
|
*
|
|
20236
20255
|
*
|
|
20237
20256
|
* cdef inline npy_datetime get_datetime64_value(object obj) nogil: # <<<<<<<<<<<<<<
|
|
@@ -20242,7 +20261,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_o
|
|
|
20242
20261
|
static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *__pyx_v_obj) {
|
|
20243
20262
|
npy_datetime __pyx_r;
|
|
20244
20263
|
|
|
20245
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20264
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1036
|
|
20246
20265
|
* also needed. That can be found using `get_datetime64_unit`.
|
|
20247
20266
|
* """
|
|
20248
20267
|
* return (<PyDatetimeScalarObject*>obj).obval # <<<<<<<<<<<<<<
|
|
@@ -20252,7 +20271,7 @@ static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *
|
|
|
20252
20271
|
__pyx_r = ((PyDatetimeScalarObject *)__pyx_v_obj)->obval;
|
|
20253
20272
|
goto __pyx_L0;
|
|
20254
20273
|
|
|
20255
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20274
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1029
|
|
20256
20275
|
*
|
|
20257
20276
|
*
|
|
20258
20277
|
* cdef inline npy_datetime get_datetime64_value(object obj) nogil: # <<<<<<<<<<<<<<
|
|
@@ -20265,7 +20284,7 @@ static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *
|
|
|
20265
20284
|
return __pyx_r;
|
|
20266
20285
|
}
|
|
20267
20286
|
|
|
20268
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20287
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1039
|
|
20269
20288
|
*
|
|
20270
20289
|
*
|
|
20271
20290
|
* cdef inline npy_timedelta get_timedelta64_value(object obj) nogil: # <<<<<<<<<<<<<<
|
|
@@ -20276,7 +20295,7 @@ static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *
|
|
|
20276
20295
|
static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject *__pyx_v_obj) {
|
|
20277
20296
|
npy_timedelta __pyx_r;
|
|
20278
20297
|
|
|
20279
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20298
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1043
|
|
20280
20299
|
* returns the int64 value underlying scalar numpy timedelta64 object
|
|
20281
20300
|
* """
|
|
20282
20301
|
* return (<PyTimedeltaScalarObject*>obj).obval # <<<<<<<<<<<<<<
|
|
@@ -20286,7 +20305,7 @@ static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject
|
|
|
20286
20305
|
__pyx_r = ((PyTimedeltaScalarObject *)__pyx_v_obj)->obval;
|
|
20287
20306
|
goto __pyx_L0;
|
|
20288
20307
|
|
|
20289
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20308
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1039
|
|
20290
20309
|
*
|
|
20291
20310
|
*
|
|
20292
20311
|
* cdef inline npy_timedelta get_timedelta64_value(object obj) nogil: # <<<<<<<<<<<<<<
|
|
@@ -20299,7 +20318,7 @@ static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject
|
|
|
20299
20318
|
return __pyx_r;
|
|
20300
20319
|
}
|
|
20301
20320
|
|
|
20302
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20321
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1046
|
|
20303
20322
|
*
|
|
20304
20323
|
*
|
|
20305
20324
|
* cdef inline NPY_DATETIMEUNIT get_datetime64_unit(object obj) nogil: # <<<<<<<<<<<<<<
|
|
@@ -20310,7 +20329,7 @@ static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject
|
|
|
20310
20329
|
static CYTHON_INLINE NPY_DATETIMEUNIT __pyx_f_5numpy_get_datetime64_unit(PyObject *__pyx_v_obj) {
|
|
20311
20330
|
NPY_DATETIMEUNIT __pyx_r;
|
|
20312
20331
|
|
|
20313
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20332
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1050
|
|
20314
20333
|
* returns the unit part of the dtype for a numpy datetime64 object.
|
|
20315
20334
|
* """
|
|
20316
20335
|
* return <NPY_DATETIMEUNIT>(<PyDatetimeScalarObject*>obj).obmeta.base # <<<<<<<<<<<<<<
|
|
@@ -20318,7 +20337,7 @@ static CYTHON_INLINE NPY_DATETIMEUNIT __pyx_f_5numpy_get_datetime64_unit(PyObjec
|
|
|
20318
20337
|
__pyx_r = ((NPY_DATETIMEUNIT)((PyDatetimeScalarObject *)__pyx_v_obj)->obmeta.base);
|
|
20319
20338
|
goto __pyx_L0;
|
|
20320
20339
|
|
|
20321
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
20340
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":1046
|
|
20322
20341
|
*
|
|
20323
20342
|
*
|
|
20324
20343
|
* cdef inline NPY_DATETIMEUNIT get_datetime64_unit(object obj) nogil: # <<<<<<<<<<<<<<
|
|
@@ -21282,10 +21301,10 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_2_add_scores(CYTHO
|
|
|
21282
21301
|
Py_ssize_t __pyx_v_itemsize;
|
|
21283
21302
|
int __pyx_v_dtype_signed;
|
|
21284
21303
|
Py_UCS4 __pyx_v_kind;
|
|
21285
|
-
int
|
|
21286
|
-
int
|
|
21287
|
-
int
|
|
21288
|
-
int
|
|
21304
|
+
int __pyx_v___pyx_fused_dtype_uint8_is_signed;
|
|
21305
|
+
int __pyx_v___pyx_fused_dtype_uint16_is_signed;
|
|
21306
|
+
int __pyx_v___pyx_fused_dtype_uint32_is_signed;
|
|
21307
|
+
int __pyx_v___pyx_fused_dtype_uint64_is_signed;
|
|
21289
21308
|
PyObject *__pyx_v_arg = NULL;
|
|
21290
21309
|
PyObject *__pyx_v_dtype = NULL;
|
|
21291
21310
|
PyObject *__pyx_v_arg_base = NULL;
|
|
@@ -21357,10 +21376,10 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_2_add_scores(CYTHO
|
|
|
21357
21376
|
__pyx_v_ndarray = ((PyTypeObject*)__pyx_t_1);
|
|
21358
21377
|
__pyx_t_1 = 0;
|
|
21359
21378
|
__pyx_v_itemsize = -1L;
|
|
21360
|
-
|
|
21361
|
-
|
|
21362
|
-
|
|
21363
|
-
|
|
21379
|
+
__pyx_v___pyx_fused_dtype_uint8_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint8)-1L) > 0));
|
|
21380
|
+
__pyx_v___pyx_fused_dtype_uint16_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint16)-1L) > 0));
|
|
21381
|
+
__pyx_v___pyx_fused_dtype_uint32_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint32)-1L) > 0));
|
|
21382
|
+
__pyx_v___pyx_fused_dtype_uint64_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint64)-1L) > 0));
|
|
21364
21383
|
if (unlikely(__pyx_v_args == Py_None)) {
|
|
21365
21384
|
PyErr_SetString(PyExc_TypeError, "object of type 'NoneType' has no len()");
|
|
21366
21385
|
__PYX_ERR(0, 87, __pyx_L1_error)
|
|
@@ -21502,7 +21521,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_2_add_scores(CYTHO
|
|
|
21502
21521
|
__pyx_t_2 = __pyx_t_4;
|
|
21503
21522
|
goto __pyx_L16_bool_binop_done;
|
|
21504
21523
|
}
|
|
21505
|
-
__pyx_t_4 = (!(
|
|
21524
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint8_is_signed ^ __pyx_v_dtype_signed));
|
|
21506
21525
|
__pyx_t_2 = __pyx_t_4;
|
|
21507
21526
|
__pyx_L16_bool_binop_done:;
|
|
21508
21527
|
if (__pyx_t_2) {
|
|
@@ -21525,7 +21544,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_2_add_scores(CYTHO
|
|
|
21525
21544
|
__pyx_t_2 = __pyx_t_4;
|
|
21526
21545
|
goto __pyx_L20_bool_binop_done;
|
|
21527
21546
|
}
|
|
21528
|
-
__pyx_t_4 = (!(
|
|
21547
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint16_is_signed ^ __pyx_v_dtype_signed));
|
|
21529
21548
|
__pyx_t_2 = __pyx_t_4;
|
|
21530
21549
|
__pyx_L20_bool_binop_done:;
|
|
21531
21550
|
if (__pyx_t_2) {
|
|
@@ -21548,7 +21567,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_2_add_scores(CYTHO
|
|
|
21548
21567
|
__pyx_t_2 = __pyx_t_4;
|
|
21549
21568
|
goto __pyx_L24_bool_binop_done;
|
|
21550
21569
|
}
|
|
21551
|
-
__pyx_t_4 = (!(
|
|
21570
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint32_is_signed ^ __pyx_v_dtype_signed));
|
|
21552
21571
|
__pyx_t_2 = __pyx_t_4;
|
|
21553
21572
|
__pyx_L24_bool_binop_done:;
|
|
21554
21573
|
if (__pyx_t_2) {
|
|
@@ -21571,7 +21590,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_2_add_scores(CYTHO
|
|
|
21571
21590
|
__pyx_t_2 = __pyx_t_4;
|
|
21572
21591
|
goto __pyx_L28_bool_binop_done;
|
|
21573
21592
|
}
|
|
21574
|
-
__pyx_t_4 = (!(
|
|
21593
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint64_is_signed ^ __pyx_v_dtype_signed));
|
|
21575
21594
|
__pyx_t_2 = __pyx_t_4;
|
|
21576
21595
|
__pyx_L28_bool_binop_done:;
|
|
21577
21596
|
if (__pyx_t_2) {
|
|
@@ -21932,7 +21951,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_2_add_scores(CYTHO
|
|
|
21932
21951
|
__pyx_t_2 = __pyx_t_4;
|
|
21933
21952
|
goto __pyx_L75_bool_binop_done;
|
|
21934
21953
|
}
|
|
21935
|
-
__pyx_t_4 = (!(
|
|
21954
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint8_is_signed ^ __pyx_v_dtype_signed));
|
|
21936
21955
|
__pyx_t_2 = __pyx_t_4;
|
|
21937
21956
|
__pyx_L75_bool_binop_done:;
|
|
21938
21957
|
if (__pyx_t_2) {
|
|
@@ -21955,7 +21974,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_2_add_scores(CYTHO
|
|
|
21955
21974
|
__pyx_t_2 = __pyx_t_4;
|
|
21956
21975
|
goto __pyx_L79_bool_binop_done;
|
|
21957
21976
|
}
|
|
21958
|
-
__pyx_t_4 = (!(
|
|
21977
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint16_is_signed ^ __pyx_v_dtype_signed));
|
|
21959
21978
|
__pyx_t_2 = __pyx_t_4;
|
|
21960
21979
|
__pyx_L79_bool_binop_done:;
|
|
21961
21980
|
if (__pyx_t_2) {
|
|
@@ -21978,7 +21997,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_2_add_scores(CYTHO
|
|
|
21978
21997
|
__pyx_t_2 = __pyx_t_4;
|
|
21979
21998
|
goto __pyx_L83_bool_binop_done;
|
|
21980
21999
|
}
|
|
21981
|
-
__pyx_t_4 = (!(
|
|
22000
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint32_is_signed ^ __pyx_v_dtype_signed));
|
|
21982
22001
|
__pyx_t_2 = __pyx_t_4;
|
|
21983
22002
|
__pyx_L83_bool_binop_done:;
|
|
21984
22003
|
if (__pyx_t_2) {
|
|
@@ -22001,7 +22020,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_2_add_scores(CYTHO
|
|
|
22001
22020
|
__pyx_t_2 = __pyx_t_4;
|
|
22002
22021
|
goto __pyx_L87_bool_binop_done;
|
|
22003
22022
|
}
|
|
22004
|
-
__pyx_t_4 = (!(
|
|
22023
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint64_is_signed ^ __pyx_v_dtype_signed));
|
|
22005
22024
|
__pyx_t_2 = __pyx_t_4;
|
|
22006
22025
|
__pyx_L87_bool_binop_done:;
|
|
22007
22026
|
if (__pyx_t_2) {
|
|
@@ -29744,10 +29763,10 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_6_fill_align_table
|
|
|
29744
29763
|
Py_ssize_t __pyx_v_itemsize;
|
|
29745
29764
|
int __pyx_v_dtype_signed;
|
|
29746
29765
|
Py_UCS4 __pyx_v_kind;
|
|
29747
|
-
int
|
|
29748
|
-
int
|
|
29749
|
-
int
|
|
29750
|
-
int
|
|
29766
|
+
int __pyx_v___pyx_fused_dtype_uint8_is_signed;
|
|
29767
|
+
int __pyx_v___pyx_fused_dtype_uint16_is_signed;
|
|
29768
|
+
int __pyx_v___pyx_fused_dtype_uint32_is_signed;
|
|
29769
|
+
int __pyx_v___pyx_fused_dtype_uint64_is_signed;
|
|
29751
29770
|
PyObject *__pyx_v_arg = NULL;
|
|
29752
29771
|
PyObject *__pyx_v_dtype = NULL;
|
|
29753
29772
|
PyObject *__pyx_v_arg_base = NULL;
|
|
@@ -29819,10 +29838,10 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_6_fill_align_table
|
|
|
29819
29838
|
__pyx_v_ndarray = ((PyTypeObject*)__pyx_t_1);
|
|
29820
29839
|
__pyx_t_1 = 0;
|
|
29821
29840
|
__pyx_v_itemsize = -1L;
|
|
29822
|
-
|
|
29823
|
-
|
|
29824
|
-
|
|
29825
|
-
|
|
29841
|
+
__pyx_v___pyx_fused_dtype_uint8_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint8)-1L) > 0));
|
|
29842
|
+
__pyx_v___pyx_fused_dtype_uint16_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint16)-1L) > 0));
|
|
29843
|
+
__pyx_v___pyx_fused_dtype_uint32_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint32)-1L) > 0));
|
|
29844
|
+
__pyx_v___pyx_fused_dtype_uint64_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint64)-1L) > 0));
|
|
29826
29845
|
if (unlikely(__pyx_v_args == Py_None)) {
|
|
29827
29846
|
PyErr_SetString(PyExc_TypeError, "object of type 'NoneType' has no len()");
|
|
29828
29847
|
__PYX_ERR(0, 374, __pyx_L1_error)
|
|
@@ -29964,7 +29983,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_6_fill_align_table
|
|
|
29964
29983
|
__pyx_t_2 = __pyx_t_4;
|
|
29965
29984
|
goto __pyx_L16_bool_binop_done;
|
|
29966
29985
|
}
|
|
29967
|
-
__pyx_t_4 = (!(
|
|
29986
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint8_is_signed ^ __pyx_v_dtype_signed));
|
|
29968
29987
|
__pyx_t_2 = __pyx_t_4;
|
|
29969
29988
|
__pyx_L16_bool_binop_done:;
|
|
29970
29989
|
if (__pyx_t_2) {
|
|
@@ -29987,7 +30006,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_6_fill_align_table
|
|
|
29987
30006
|
__pyx_t_2 = __pyx_t_4;
|
|
29988
30007
|
goto __pyx_L20_bool_binop_done;
|
|
29989
30008
|
}
|
|
29990
|
-
__pyx_t_4 = (!(
|
|
30009
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint16_is_signed ^ __pyx_v_dtype_signed));
|
|
29991
30010
|
__pyx_t_2 = __pyx_t_4;
|
|
29992
30011
|
__pyx_L20_bool_binop_done:;
|
|
29993
30012
|
if (__pyx_t_2) {
|
|
@@ -30010,7 +30029,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_6_fill_align_table
|
|
|
30010
30029
|
__pyx_t_2 = __pyx_t_4;
|
|
30011
30030
|
goto __pyx_L24_bool_binop_done;
|
|
30012
30031
|
}
|
|
30013
|
-
__pyx_t_4 = (!(
|
|
30032
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint32_is_signed ^ __pyx_v_dtype_signed));
|
|
30014
30033
|
__pyx_t_2 = __pyx_t_4;
|
|
30015
30034
|
__pyx_L24_bool_binop_done:;
|
|
30016
30035
|
if (__pyx_t_2) {
|
|
@@ -30033,7 +30052,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_6_fill_align_table
|
|
|
30033
30052
|
__pyx_t_2 = __pyx_t_4;
|
|
30034
30053
|
goto __pyx_L28_bool_binop_done;
|
|
30035
30054
|
}
|
|
30036
|
-
__pyx_t_4 = (!(
|
|
30055
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint64_is_signed ^ __pyx_v_dtype_signed));
|
|
30037
30056
|
__pyx_t_2 = __pyx_t_4;
|
|
30038
30057
|
__pyx_L28_bool_binop_done:;
|
|
30039
30058
|
if (__pyx_t_2) {
|
|
@@ -30394,7 +30413,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_6_fill_align_table
|
|
|
30394
30413
|
__pyx_t_2 = __pyx_t_4;
|
|
30395
30414
|
goto __pyx_L75_bool_binop_done;
|
|
30396
30415
|
}
|
|
30397
|
-
__pyx_t_4 = (!(
|
|
30416
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint8_is_signed ^ __pyx_v_dtype_signed));
|
|
30398
30417
|
__pyx_t_2 = __pyx_t_4;
|
|
30399
30418
|
__pyx_L75_bool_binop_done:;
|
|
30400
30419
|
if (__pyx_t_2) {
|
|
@@ -30417,7 +30436,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_6_fill_align_table
|
|
|
30417
30436
|
__pyx_t_2 = __pyx_t_4;
|
|
30418
30437
|
goto __pyx_L79_bool_binop_done;
|
|
30419
30438
|
}
|
|
30420
|
-
__pyx_t_4 = (!(
|
|
30439
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint16_is_signed ^ __pyx_v_dtype_signed));
|
|
30421
30440
|
__pyx_t_2 = __pyx_t_4;
|
|
30422
30441
|
__pyx_L79_bool_binop_done:;
|
|
30423
30442
|
if (__pyx_t_2) {
|
|
@@ -30440,7 +30459,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_6_fill_align_table
|
|
|
30440
30459
|
__pyx_t_2 = __pyx_t_4;
|
|
30441
30460
|
goto __pyx_L83_bool_binop_done;
|
|
30442
30461
|
}
|
|
30443
|
-
__pyx_t_4 = (!(
|
|
30462
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint32_is_signed ^ __pyx_v_dtype_signed));
|
|
30444
30463
|
__pyx_t_2 = __pyx_t_4;
|
|
30445
30464
|
__pyx_L83_bool_binop_done:;
|
|
30446
30465
|
if (__pyx_t_2) {
|
|
@@ -30463,7 +30482,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_6_fill_align_table
|
|
|
30463
30482
|
__pyx_t_2 = __pyx_t_4;
|
|
30464
30483
|
goto __pyx_L87_bool_binop_done;
|
|
30465
30484
|
}
|
|
30466
|
-
__pyx_t_4 = (!(
|
|
30485
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint64_is_signed ^ __pyx_v_dtype_signed));
|
|
30467
30486
|
__pyx_t_2 = __pyx_t_4;
|
|
30468
30487
|
__pyx_L87_bool_binop_done:;
|
|
30469
30488
|
if (__pyx_t_2) {
|
|
@@ -39688,10 +39707,10 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_8_fill_align_table
|
|
|
39688
39707
|
Py_ssize_t __pyx_v_itemsize;
|
|
39689
39708
|
int __pyx_v_dtype_signed;
|
|
39690
39709
|
Py_UCS4 __pyx_v_kind;
|
|
39691
|
-
int
|
|
39692
|
-
int
|
|
39693
|
-
int
|
|
39694
|
-
int
|
|
39710
|
+
int __pyx_v___pyx_fused_dtype_uint8_is_signed;
|
|
39711
|
+
int __pyx_v___pyx_fused_dtype_uint16_is_signed;
|
|
39712
|
+
int __pyx_v___pyx_fused_dtype_uint32_is_signed;
|
|
39713
|
+
int __pyx_v___pyx_fused_dtype_uint64_is_signed;
|
|
39695
39714
|
PyObject *__pyx_v_arg = NULL;
|
|
39696
39715
|
PyObject *__pyx_v_dtype = NULL;
|
|
39697
39716
|
PyObject *__pyx_v_arg_base = NULL;
|
|
@@ -39763,10 +39782,10 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_8_fill_align_table
|
|
|
39763
39782
|
__pyx_v_ndarray = ((PyTypeObject*)__pyx_t_1);
|
|
39764
39783
|
__pyx_t_1 = 0;
|
|
39765
39784
|
__pyx_v_itemsize = -1L;
|
|
39766
|
-
|
|
39767
|
-
|
|
39768
|
-
|
|
39769
|
-
|
|
39785
|
+
__pyx_v___pyx_fused_dtype_uint8_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint8)-1L) > 0));
|
|
39786
|
+
__pyx_v___pyx_fused_dtype_uint16_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint16)-1L) > 0));
|
|
39787
|
+
__pyx_v___pyx_fused_dtype_uint32_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint32)-1L) > 0));
|
|
39788
|
+
__pyx_v___pyx_fused_dtype_uint64_is_signed = (!(((__pyx_t_7biotite_8sequence_5align_8pairwise_uint64)-1L) > 0));
|
|
39770
39789
|
if (unlikely(__pyx_v_args == Py_None)) {
|
|
39771
39790
|
PyErr_SetString(PyExc_TypeError, "object of type 'NoneType' has no len()");
|
|
39772
39791
|
__PYX_ERR(0, 456, __pyx_L1_error)
|
|
@@ -39908,7 +39927,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_8_fill_align_table
|
|
|
39908
39927
|
__pyx_t_2 = __pyx_t_4;
|
|
39909
39928
|
goto __pyx_L16_bool_binop_done;
|
|
39910
39929
|
}
|
|
39911
|
-
__pyx_t_4 = (!(
|
|
39930
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint8_is_signed ^ __pyx_v_dtype_signed));
|
|
39912
39931
|
__pyx_t_2 = __pyx_t_4;
|
|
39913
39932
|
__pyx_L16_bool_binop_done:;
|
|
39914
39933
|
if (__pyx_t_2) {
|
|
@@ -39931,7 +39950,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_8_fill_align_table
|
|
|
39931
39950
|
__pyx_t_2 = __pyx_t_4;
|
|
39932
39951
|
goto __pyx_L20_bool_binop_done;
|
|
39933
39952
|
}
|
|
39934
|
-
__pyx_t_4 = (!(
|
|
39953
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint16_is_signed ^ __pyx_v_dtype_signed));
|
|
39935
39954
|
__pyx_t_2 = __pyx_t_4;
|
|
39936
39955
|
__pyx_L20_bool_binop_done:;
|
|
39937
39956
|
if (__pyx_t_2) {
|
|
@@ -39954,7 +39973,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_8_fill_align_table
|
|
|
39954
39973
|
__pyx_t_2 = __pyx_t_4;
|
|
39955
39974
|
goto __pyx_L24_bool_binop_done;
|
|
39956
39975
|
}
|
|
39957
|
-
__pyx_t_4 = (!(
|
|
39976
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint32_is_signed ^ __pyx_v_dtype_signed));
|
|
39958
39977
|
__pyx_t_2 = __pyx_t_4;
|
|
39959
39978
|
__pyx_L24_bool_binop_done:;
|
|
39960
39979
|
if (__pyx_t_2) {
|
|
@@ -39977,7 +39996,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_8_fill_align_table
|
|
|
39977
39996
|
__pyx_t_2 = __pyx_t_4;
|
|
39978
39997
|
goto __pyx_L28_bool_binop_done;
|
|
39979
39998
|
}
|
|
39980
|
-
__pyx_t_4 = (!(
|
|
39999
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint64_is_signed ^ __pyx_v_dtype_signed));
|
|
39981
40000
|
__pyx_t_2 = __pyx_t_4;
|
|
39982
40001
|
__pyx_L28_bool_binop_done:;
|
|
39983
40002
|
if (__pyx_t_2) {
|
|
@@ -40338,7 +40357,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_8_fill_align_table
|
|
|
40338
40357
|
__pyx_t_2 = __pyx_t_4;
|
|
40339
40358
|
goto __pyx_L75_bool_binop_done;
|
|
40340
40359
|
}
|
|
40341
|
-
__pyx_t_4 = (!(
|
|
40360
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint8_is_signed ^ __pyx_v_dtype_signed));
|
|
40342
40361
|
__pyx_t_2 = __pyx_t_4;
|
|
40343
40362
|
__pyx_L75_bool_binop_done:;
|
|
40344
40363
|
if (__pyx_t_2) {
|
|
@@ -40361,7 +40380,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_8_fill_align_table
|
|
|
40361
40380
|
__pyx_t_2 = __pyx_t_4;
|
|
40362
40381
|
goto __pyx_L79_bool_binop_done;
|
|
40363
40382
|
}
|
|
40364
|
-
__pyx_t_4 = (!(
|
|
40383
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint16_is_signed ^ __pyx_v_dtype_signed));
|
|
40365
40384
|
__pyx_t_2 = __pyx_t_4;
|
|
40366
40385
|
__pyx_L79_bool_binop_done:;
|
|
40367
40386
|
if (__pyx_t_2) {
|
|
@@ -40384,7 +40403,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_8_fill_align_table
|
|
|
40384
40403
|
__pyx_t_2 = __pyx_t_4;
|
|
40385
40404
|
goto __pyx_L83_bool_binop_done;
|
|
40386
40405
|
}
|
|
40387
|
-
__pyx_t_4 = (!(
|
|
40406
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint32_is_signed ^ __pyx_v_dtype_signed));
|
|
40388
40407
|
__pyx_t_2 = __pyx_t_4;
|
|
40389
40408
|
__pyx_L83_bool_binop_done:;
|
|
40390
40409
|
if (__pyx_t_2) {
|
|
@@ -40407,7 +40426,7 @@ static PyObject *__pyx_pf_7biotite_8sequence_5align_8pairwise_8_fill_align_table
|
|
|
40407
40426
|
__pyx_t_2 = __pyx_t_4;
|
|
40408
40427
|
goto __pyx_L87_bool_binop_done;
|
|
40409
40428
|
}
|
|
40410
|
-
__pyx_t_4 = (!(
|
|
40429
|
+
__pyx_t_4 = (!(__pyx_v___pyx_fused_dtype_uint64_is_signed ^ __pyx_v_dtype_signed));
|
|
40411
40430
|
__pyx_t_2 = __pyx_t_4;
|
|
40412
40431
|
__pyx_L87_bool_binop_done:;
|
|
40413
40432
|
if (__pyx_t_2) {
|
|
@@ -55062,7 +55081,7 @@ static CYTHON_SMALL_CODE int __Pyx_InitCachedConstants(void) {
|
|
|
55062
55081
|
__Pyx_GOTREF(__pyx_tuple__8);
|
|
55063
55082
|
__Pyx_GIVEREF(__pyx_tuple__8);
|
|
55064
55083
|
|
|
55065
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
55084
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":984
|
|
55066
55085
|
* __pyx_import_array()
|
|
55067
55086
|
* except Exception:
|
|
55068
55087
|
* raise ImportError("numpy.core.multiarray failed to import") # <<<<<<<<<<<<<<
|
|
@@ -55073,7 +55092,7 @@ static CYTHON_SMALL_CODE int __Pyx_InitCachedConstants(void) {
|
|
|
55073
55092
|
__Pyx_GOTREF(__pyx_tuple__9);
|
|
55074
55093
|
__Pyx_GIVEREF(__pyx_tuple__9);
|
|
55075
55094
|
|
|
55076
|
-
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-
|
|
55095
|
+
/* "../../../../../private/var/folders/24/8k48jl6d249_n_qfxwsl6xvm0000gn/T/pip-build-env-4zd8_pj9/overlay/lib/python3.12/site-packages/numpy/__init__.cython-30.pxd":990
|
|
55077
55096
|
* _import_umath()
|
|
55078
55097
|
* except Exception:
|
|
55079
55098
|
* raise ImportError("numpy.core.umath failed to import") # <<<<<<<<<<<<<<
|
|
@@ -55691,33 +55710,33 @@ static int __Pyx_modinit_type_import_code(void) {
|
|
|
55691
55710
|
/*--- Type import code ---*/
|
|
55692
55711
|
__pyx_t_1 = PyImport_ImportModule(__Pyx_BUILTIN_MODULE_NAME); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 9, __pyx_L1_error)
|
|
55693
55712
|
__Pyx_GOTREF(__pyx_t_1);
|
|
55694
|
-
__pyx_ptype_7cpython_4type_type =
|
|
55713
|
+
__pyx_ptype_7cpython_4type_type = __Pyx_ImportType_3_0_10(__pyx_t_1, __Pyx_BUILTIN_MODULE_NAME, "type",
|
|
55695
55714
|
#if defined(PYPY_VERSION_NUM) && PYPY_VERSION_NUM < 0x050B0000
|
|
55696
|
-
sizeof(PyTypeObject),
|
|
55715
|
+
sizeof(PyTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyTypeObject),
|
|
55697
55716
|
#elif CYTHON_COMPILING_IN_LIMITED_API
|
|
55698
|
-
sizeof(PyTypeObject),
|
|
55717
|
+
sizeof(PyTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyTypeObject),
|
|
55699
55718
|
#else
|
|
55700
|
-
sizeof(PyHeapTypeObject),
|
|
55719
|
+
sizeof(PyHeapTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyHeapTypeObject),
|
|
55701
55720
|
#endif
|
|
55702
|
-
|
|
55721
|
+
__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_7cpython_4type_type) __PYX_ERR(3, 9, __pyx_L1_error)
|
|
55703
55722
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
55704
55723
|
__pyx_t_1 = PyImport_ImportModule("numpy"); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 202, __pyx_L1_error)
|
|
55705
55724
|
__Pyx_GOTREF(__pyx_t_1);
|
|
55706
|
-
__pyx_ptype_5numpy_dtype =
|
|
55707
|
-
__pyx_ptype_5numpy_flatiter =
|
|
55708
|
-
__pyx_ptype_5numpy_broadcast =
|
|
55709
|
-
__pyx_ptype_5numpy_ndarray =
|
|
55710
|
-
__pyx_ptype_5numpy_generic =
|
|
55711
|
-
__pyx_ptype_5numpy_number =
|
|
55712
|
-
__pyx_ptype_5numpy_integer =
|
|
55713
|
-
__pyx_ptype_5numpy_signedinteger =
|
|
55714
|
-
__pyx_ptype_5numpy_unsignedinteger =
|
|
55715
|
-
__pyx_ptype_5numpy_inexact =
|
|
55716
|
-
__pyx_ptype_5numpy_floating =
|
|
55717
|
-
__pyx_ptype_5numpy_complexfloating =
|
|
55718
|
-
__pyx_ptype_5numpy_flexible =
|
|
55719
|
-
__pyx_ptype_5numpy_character =
|
|
55720
|
-
__pyx_ptype_5numpy_ufunc =
|
|
55725
|
+
__pyx_ptype_5numpy_dtype = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "dtype", sizeof(PyArray_Descr), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArray_Descr),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_dtype) __PYX_ERR(2, 202, __pyx_L1_error)
|
|
55726
|
+
__pyx_ptype_5numpy_flatiter = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "flatiter", sizeof(PyArrayIterObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArrayIterObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_flatiter) __PYX_ERR(2, 225, __pyx_L1_error)
|
|
55727
|
+
__pyx_ptype_5numpy_broadcast = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "broadcast", sizeof(PyArrayMultiIterObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArrayMultiIterObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_broadcast) __PYX_ERR(2, 229, __pyx_L1_error)
|
|
55728
|
+
__pyx_ptype_5numpy_ndarray = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "ndarray", sizeof(PyArrayObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArrayObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_ndarray) __PYX_ERR(2, 238, __pyx_L1_error)
|
|
55729
|
+
__pyx_ptype_5numpy_generic = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "generic", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_generic) __PYX_ERR(2, 809, __pyx_L1_error)
|
|
55730
|
+
__pyx_ptype_5numpy_number = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "number", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_number) __PYX_ERR(2, 811, __pyx_L1_error)
|
|
55731
|
+
__pyx_ptype_5numpy_integer = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "integer", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_integer) __PYX_ERR(2, 813, __pyx_L1_error)
|
|
55732
|
+
__pyx_ptype_5numpy_signedinteger = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "signedinteger", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_signedinteger) __PYX_ERR(2, 815, __pyx_L1_error)
|
|
55733
|
+
__pyx_ptype_5numpy_unsignedinteger = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "unsignedinteger", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_unsignedinteger) __PYX_ERR(2, 817, __pyx_L1_error)
|
|
55734
|
+
__pyx_ptype_5numpy_inexact = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "inexact", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_inexact) __PYX_ERR(2, 819, __pyx_L1_error)
|
|
55735
|
+
__pyx_ptype_5numpy_floating = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "floating", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_floating) __PYX_ERR(2, 821, __pyx_L1_error)
|
|
55736
|
+
__pyx_ptype_5numpy_complexfloating = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "complexfloating", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_complexfloating) __PYX_ERR(2, 823, __pyx_L1_error)
|
|
55737
|
+
__pyx_ptype_5numpy_flexible = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "flexible", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_flexible) __PYX_ERR(2, 825, __pyx_L1_error)
|
|
55738
|
+
__pyx_ptype_5numpy_character = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "character", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_character) __PYX_ERR(2, 827, __pyx_L1_error)
|
|
55739
|
+
__pyx_ptype_5numpy_ufunc = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "ufunc", sizeof(PyUFuncObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyUFuncObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_ufunc) __PYX_ERR(2, 866, __pyx_L1_error)
|
|
55721
55740
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
55722
55741
|
__Pyx_RefNannyFinishContext();
|
|
55723
55742
|
return 0;
|
|
@@ -55745,9 +55764,9 @@ static int __Pyx_modinit_function_import_code(void) {
|
|
|
55745
55764
|
/*--- Function import code ---*/
|
|
55746
55765
|
__pyx_t_1 = PyImport_ImportModule("biotite.sequence.align.tracetable"); if (!__pyx_t_1) __PYX_ERR(0, 1, __pyx_L1_error)
|
|
55747
55766
|
__Pyx_GOTREF(__pyx_t_1);
|
|
55748
|
-
if (
|
|
55749
|
-
if (
|
|
55750
|
-
if (
|
|
55767
|
+
if (__Pyx_ImportFunction_3_0_10(__pyx_t_1, "get_trace_linear", (void (**)(void))&__pyx_f_7biotite_8sequence_5align_10tracetable_get_trace_linear, "__pyx_t_5numpy_uint8_t (__pyx_t_5numpy_int32_t, __pyx_t_5numpy_int32_t, __pyx_t_5numpy_int32_t, __pyx_t_5numpy_int32_t *)") < 0) __PYX_ERR(0, 1, __pyx_L1_error)
|
|
55768
|
+
if (__Pyx_ImportFunction_3_0_10(__pyx_t_1, "get_trace_affine", (void (**)(void))&__pyx_f_7biotite_8sequence_5align_10tracetable_get_trace_affine, "__pyx_t_5numpy_uint8_t (__pyx_t_5numpy_int32_t, __pyx_t_5numpy_int32_t, __pyx_t_5numpy_int32_t, __pyx_t_5numpy_int32_t, __pyx_t_5numpy_int32_t, __pyx_t_5numpy_int32_t, __pyx_t_5numpy_int32_t, __pyx_t_5numpy_int32_t *, __pyx_t_5numpy_int32_t *, __pyx_t_5numpy_int32_t *)") < 0) __PYX_ERR(0, 1, __pyx_L1_error)
|
|
55769
|
+
if (__Pyx_ImportFunction_3_0_10(__pyx_t_1, "follow_trace", (void (**)(void))&__pyx_f_7biotite_8sequence_5align_10tracetable_follow_trace, "int (__Pyx_memviewslice, int, int, int, int, __Pyx_memviewslice, PyObject *, int, int *, int, int, int)") < 0) __PYX_ERR(0, 1, __pyx_L1_error)
|
|
55751
55770
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
55752
55771
|
__Pyx_RefNannyFinishContext();
|
|
55753
55772
|
return 0;
|
|
@@ -57400,11 +57419,11 @@ static CYTHON_INLINE PyObject * __Pyx_GetKwValue_FASTCALL(PyObject *kwnames, PyO
|
|
|
57400
57419
|
{
|
|
57401
57420
|
int eq = __Pyx_PyUnicode_Equals(s, PyTuple_GET_ITEM(kwnames, i), Py_EQ);
|
|
57402
57421
|
if (unlikely(eq != 0)) {
|
|
57403
|
-
if (unlikely(eq < 0)) return NULL;
|
|
57422
|
+
if (unlikely(eq < 0)) return NULL;
|
|
57404
57423
|
return kwvalues[i];
|
|
57405
57424
|
}
|
|
57406
57425
|
}
|
|
57407
|
-
return NULL;
|
|
57426
|
+
return NULL;
|
|
57408
57427
|
}
|
|
57409
57428
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030d0000
|
|
57410
57429
|
CYTHON_UNUSED static PyObject *__Pyx_KwargsAsDict_FASTCALL(PyObject *kwnames, PyObject *const *kwvalues) {
|
|
@@ -57517,7 +57536,7 @@ static int __Pyx_ParseOptionalKeywords(
|
|
|
57517
57536
|
if (*name) {
|
|
57518
57537
|
values[name-argnames] = value;
|
|
57519
57538
|
#if CYTHON_AVOID_BORROWED_REFS
|
|
57520
|
-
Py_INCREF(value);
|
|
57539
|
+
Py_INCREF(value);
|
|
57521
57540
|
Py_DECREF(key);
|
|
57522
57541
|
#endif
|
|
57523
57542
|
key = NULL;
|
|
@@ -57536,7 +57555,7 @@ static int __Pyx_ParseOptionalKeywords(
|
|
|
57536
57555
|
&& _PyString_Eq(**name, key)) {
|
|
57537
57556
|
values[name-argnames] = value;
|
|
57538
57557
|
#if CYTHON_AVOID_BORROWED_REFS
|
|
57539
|
-
value = NULL;
|
|
57558
|
+
value = NULL;
|
|
57540
57559
|
#endif
|
|
57541
57560
|
break;
|
|
57542
57561
|
}
|
|
@@ -57568,7 +57587,7 @@ static int __Pyx_ParseOptionalKeywords(
|
|
|
57568
57587
|
if (cmp == 0) {
|
|
57569
57588
|
values[name-argnames] = value;
|
|
57570
57589
|
#if CYTHON_AVOID_BORROWED_REFS
|
|
57571
|
-
value = NULL;
|
|
57590
|
+
value = NULL;
|
|
57572
57591
|
#endif
|
|
57573
57592
|
break;
|
|
57574
57593
|
}
|
|
@@ -59583,9 +59602,10 @@ static int __Pyx_PyMemoryView_Get_ndim(PyObject *obj) {
|
|
|
59583
59602
|
|
|
59584
59603
|
/* IterFinish */
|
|
59585
59604
|
static CYTHON_INLINE int __Pyx_IterFinish(void) {
|
|
59605
|
+
PyObject* exc_type;
|
|
59586
59606
|
__Pyx_PyThreadState_declare
|
|
59587
59607
|
__Pyx_PyThreadState_assign
|
|
59588
|
-
|
|
59608
|
+
exc_type = __Pyx_PyErr_CurrentExceptionType();
|
|
59589
59609
|
if (unlikely(exc_type)) {
|
|
59590
59610
|
if (unlikely(!__Pyx_PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration)))
|
|
59591
59611
|
return -1;
|
|
@@ -59909,9 +59929,10 @@ static CYTHON_INLINE int __Pyx_dict_iter_next(
|
|
|
59909
59929
|
|
|
59910
59930
|
/* UnpackUnboundCMethod */
|
|
59911
59931
|
static PyObject *__Pyx_SelflessCall(PyObject *method, PyObject *args, PyObject *kwargs) {
|
|
59932
|
+
PyObject *result;
|
|
59912
59933
|
PyObject *selfless_args = PyTuple_GetSlice(args, 1, PyTuple_Size(args));
|
|
59913
59934
|
if (unlikely(!selfless_args)) return NULL;
|
|
59914
|
-
|
|
59935
|
+
result = PyObject_Call(method, selfless_args, kwargs);
|
|
59915
59936
|
Py_DECREF(selfless_args);
|
|
59916
59937
|
return result;
|
|
59917
59938
|
}
|
|
@@ -60928,10 +60949,10 @@ __PYX_GOOD:
|
|
|
60928
60949
|
#endif
|
|
60929
60950
|
|
|
60930
60951
|
/* TypeImport */
|
|
60931
|
-
#ifndef
|
|
60932
|
-
#define
|
|
60933
|
-
static PyTypeObject *
|
|
60934
|
-
size_t size, size_t alignment, enum
|
|
60952
|
+
#ifndef __PYX_HAVE_RT_ImportType_3_0_10
|
|
60953
|
+
#define __PYX_HAVE_RT_ImportType_3_0_10
|
|
60954
|
+
static PyTypeObject *__Pyx_ImportType_3_0_10(PyObject *module, const char *module_name, const char *class_name,
|
|
60955
|
+
size_t size, size_t alignment, enum __Pyx_ImportType_CheckSize_3_0_10 check_size)
|
|
60935
60956
|
{
|
|
60936
60957
|
PyObject *result = 0;
|
|
60937
60958
|
char warning[200];
|
|
@@ -60985,7 +61006,7 @@ static PyTypeObject *__Pyx_ImportType_3_0_7(PyObject *module, const char *module
|
|
|
60985
61006
|
module_name, class_name, size, basicsize+itemsize);
|
|
60986
61007
|
goto bad;
|
|
60987
61008
|
}
|
|
60988
|
-
if (check_size ==
|
|
61009
|
+
if (check_size == __Pyx_ImportType_CheckSize_Error_3_0_10 &&
|
|
60989
61010
|
((size_t)basicsize > size || (size_t)(basicsize + itemsize) < size)) {
|
|
60990
61011
|
PyErr_Format(PyExc_ValueError,
|
|
60991
61012
|
"%.200s.%.200s size changed, may indicate binary incompatibility. "
|
|
@@ -60993,7 +61014,7 @@ static PyTypeObject *__Pyx_ImportType_3_0_7(PyObject *module, const char *module
|
|
|
60993
61014
|
module_name, class_name, size, basicsize, basicsize+itemsize);
|
|
60994
61015
|
goto bad;
|
|
60995
61016
|
}
|
|
60996
|
-
else if (check_size ==
|
|
61017
|
+
else if (check_size == __Pyx_ImportType_CheckSize_Warn_3_0_10 && (size_t)basicsize > size) {
|
|
60997
61018
|
PyOS_snprintf(warning, sizeof(warning),
|
|
60998
61019
|
"%s.%s size changed, may indicate binary incompatibility. "
|
|
60999
61020
|
"Expected %zd from C header, got %zd from PyObject",
|
|
@@ -61993,7 +62014,7 @@ static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS(PyObject *func,
|
|
|
61993
62014
|
default:
|
|
61994
62015
|
return NULL;
|
|
61995
62016
|
}
|
|
61996
|
-
return ((
|
|
62017
|
+
return ((__Pyx_PyCFunctionFastWithKeywords)(void(*)(void))def->ml_meth)(self, args, nargs, kwnames);
|
|
61997
62018
|
}
|
|
61998
62019
|
static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS_METHOD(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames)
|
|
61999
62020
|
{
|
|
@@ -62810,7 +62831,7 @@ static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
|
|
|
62810
62831
|
#else
|
|
62811
62832
|
py_code = PyCode_NewEmpty(filename, funcname, py_line);
|
|
62812
62833
|
#endif
|
|
62813
|
-
Py_XDECREF(py_funcname);
|
|
62834
|
+
Py_XDECREF(py_funcname);
|
|
62814
62835
|
return py_code;
|
|
62815
62836
|
bad:
|
|
62816
62837
|
Py_XDECREF(py_funcname);
|
|
@@ -65725,9 +65746,9 @@ static int __Pyx_check_binary_version(unsigned long ct_version, unsigned long rt
|
|
|
65725
65746
|
}
|
|
65726
65747
|
|
|
65727
65748
|
/* FunctionImport */
|
|
65728
|
-
#ifndef
|
|
65729
|
-
#define
|
|
65730
|
-
static int
|
|
65749
|
+
#ifndef __PYX_HAVE_RT_ImportFunction_3_0_10
|
|
65750
|
+
#define __PYX_HAVE_RT_ImportFunction_3_0_10
|
|
65751
|
+
static int __Pyx_ImportFunction_3_0_10(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
|
|
65731
65752
|
PyObject *d = 0;
|
|
65732
65753
|
PyObject *cobj = 0;
|
|
65733
65754
|
union {
|