biotite 0.39.0__cp310-cp310-win_amd64.whl → 0.40.0__cp310-cp310-win_amd64.whl

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Files changed (104) hide show
  1. biotite/__init__.py +3 -3
  2. biotite/application/dssp/app.py +18 -18
  3. biotite/database/rcsb/download.py +19 -14
  4. biotite/sequence/align/banded.c +258 -237
  5. biotite/sequence/align/banded.cp310-win_amd64.pyd +0 -0
  6. biotite/sequence/align/kmeralphabet.c +243 -222
  7. biotite/sequence/align/kmeralphabet.cp310-win_amd64.pyd +0 -0
  8. biotite/sequence/align/kmersimilarity.c +215 -196
  9. biotite/sequence/align/kmersimilarity.cp310-win_amd64.pyd +0 -0
  10. biotite/sequence/align/kmertable.cp310-win_amd64.pyd +0 -0
  11. biotite/sequence/align/kmertable.cpp +233 -205
  12. biotite/sequence/align/localgapped.c +258 -237
  13. biotite/sequence/align/localgapped.cp310-win_amd64.pyd +0 -0
  14. biotite/sequence/align/localungapped.c +235 -214
  15. biotite/sequence/align/localungapped.cp310-win_amd64.pyd +0 -0
  16. biotite/sequence/align/multiple.c +255 -234
  17. biotite/sequence/align/multiple.cp310-win_amd64.pyd +0 -0
  18. biotite/sequence/align/pairwise.c +274 -253
  19. biotite/sequence/align/pairwise.cp310-win_amd64.pyd +0 -0
  20. biotite/sequence/align/permutation.c +215 -196
  21. biotite/sequence/align/permutation.cp310-win_amd64.pyd +0 -0
  22. biotite/sequence/align/selector.c +217 -197
  23. biotite/sequence/align/selector.cp310-win_amd64.pyd +0 -0
  24. biotite/sequence/align/tracetable.c +215 -195
  25. biotite/sequence/align/tracetable.cp310-win_amd64.pyd +0 -0
  26. biotite/sequence/codec.c +235 -214
  27. biotite/sequence/codec.cp310-win_amd64.pyd +0 -0
  28. biotite/sequence/phylo/nj.c +215 -196
  29. biotite/sequence/phylo/nj.cp310-win_amd64.pyd +0 -0
  30. biotite/sequence/phylo/tree.c +227 -202
  31. biotite/sequence/phylo/tree.cp310-win_amd64.pyd +0 -0
  32. biotite/sequence/phylo/upgma.c +215 -196
  33. biotite/sequence/phylo/upgma.cp310-win_amd64.pyd +0 -0
  34. biotite/structure/basepairs.py +7 -12
  35. biotite/structure/bonds.c +1175 -1226
  36. biotite/structure/bonds.cp310-win_amd64.pyd +0 -0
  37. biotite/structure/celllist.c +217 -197
  38. biotite/structure/celllist.cp310-win_amd64.pyd +0 -0
  39. biotite/structure/charges.c +1052 -1101
  40. biotite/structure/charges.cp310-win_amd64.pyd +0 -0
  41. biotite/structure/filter.py +30 -37
  42. biotite/structure/info/__init__.py +5 -8
  43. biotite/structure/info/atoms.py +25 -67
  44. biotite/structure/info/bonds.py +46 -100
  45. biotite/structure/info/ccd/README.rst +8 -0
  46. biotite/structure/info/ccd/amino_acids.txt +1646 -0
  47. biotite/structure/info/ccd/carbohydrates.txt +1133 -0
  48. biotite/structure/info/ccd/components.bcif +0 -0
  49. biotite/structure/info/ccd/nucleotides.txt +797 -0
  50. biotite/structure/info/ccd.py +95 -0
  51. biotite/structure/info/groups.py +90 -0
  52. biotite/structure/info/masses.py +21 -20
  53. biotite/structure/info/misc.py +11 -22
  54. biotite/structure/info/standardize.py +17 -12
  55. biotite/structure/io/__init__.py +2 -4
  56. biotite/structure/io/ctab.py +1 -1
  57. biotite/structure/io/general.py +37 -43
  58. biotite/structure/io/mmtf/__init__.py +3 -0
  59. biotite/structure/io/mmtf/convertarray.c +219 -198
  60. biotite/structure/io/mmtf/convertarray.cp310-win_amd64.pyd +0 -0
  61. biotite/structure/io/mmtf/convertfile.c +217 -197
  62. biotite/structure/io/mmtf/convertfile.cp310-win_amd64.pyd +0 -0
  63. biotite/structure/io/mmtf/decode.c +225 -204
  64. biotite/structure/io/mmtf/decode.cp310-win_amd64.pyd +0 -0
  65. biotite/structure/io/mmtf/encode.c +215 -196
  66. biotite/structure/io/mmtf/encode.cp310-win_amd64.pyd +0 -0
  67. biotite/structure/io/mmtf/file.py +34 -26
  68. biotite/structure/io/npz/__init__.py +3 -0
  69. biotite/structure/io/npz/file.py +21 -18
  70. biotite/structure/io/pdb/__init__.py +3 -3
  71. biotite/structure/io/pdb/file.py +5 -3
  72. biotite/structure/io/pdb/hybrid36.c +63 -43
  73. biotite/structure/io/pdb/hybrid36.cp310-win_amd64.pyd +0 -0
  74. biotite/structure/io/pdbqt/file.py +32 -32
  75. biotite/structure/io/pdbx/__init__.py +13 -6
  76. biotite/structure/io/pdbx/bcif.py +649 -0
  77. biotite/structure/io/pdbx/cif.py +1028 -0
  78. biotite/structure/io/pdbx/component.py +243 -0
  79. biotite/structure/io/pdbx/convert.py +707 -359
  80. biotite/structure/io/pdbx/encoding.c +112813 -0
  81. biotite/structure/io/pdbx/encoding.cp310-win_amd64.pyd +0 -0
  82. biotite/structure/io/pdbx/error.py +14 -0
  83. biotite/structure/io/pdbx/legacy.py +267 -0
  84. biotite/structure/molecules.py +151 -151
  85. biotite/structure/sasa.c +215 -196
  86. biotite/structure/sasa.cp310-win_amd64.pyd +0 -0
  87. biotite/structure/superimpose.py +158 -115
  88. {biotite-0.39.0.dist-info → biotite-0.40.0.dist-info}/METADATA +2 -2
  89. {biotite-0.39.0.dist-info → biotite-0.40.0.dist-info}/RECORD +92 -90
  90. {biotite-0.39.0.dist-info → biotite-0.40.0.dist-info}/WHEEL +1 -1
  91. biotite/structure/info/amino_acids.json +0 -1556
  92. biotite/structure/info/amino_acids.py +0 -42
  93. biotite/structure/info/carbohydrates.json +0 -1122
  94. biotite/structure/info/carbohydrates.py +0 -39
  95. biotite/structure/info/intra_bonds.msgpack +0 -0
  96. biotite/structure/info/link_types.msgpack +0 -1
  97. biotite/structure/info/nucleotides.json +0 -772
  98. biotite/structure/info/nucleotides.py +0 -39
  99. biotite/structure/info/residue_masses.msgpack +0 -0
  100. biotite/structure/info/residue_names.msgpack +0 -3
  101. biotite/structure/info/residues.msgpack +0 -0
  102. biotite/structure/io/pdbx/file.py +0 -652
  103. {biotite-0.39.0.dist-info → biotite-0.40.0.dist-info}/LICENSE.rst +0 -0
  104. {biotite-0.39.0.dist-info → biotite-0.40.0.dist-info}/top_level.txt +0 -0
@@ -1,4 +1,4 @@
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- /* Generated by Cython 3.0.7 */
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+ /* Generated by Cython 3.0.10 */
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  /* BEGIN: Cython Metadata
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  {
@@ -37,10 +37,10 @@ END: Cython Metadata */
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  #else
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  #define __PYX_EXTRA_ABI_MODULE_NAME ""
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  #endif
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- #define CYTHON_ABI "3_0_7" __PYX_EXTRA_ABI_MODULE_NAME
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+ #define CYTHON_ABI "3_0_10" __PYX_EXTRA_ABI_MODULE_NAME
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  #define __PYX_ABI_MODULE_NAME "_cython_" CYTHON_ABI
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  #define __PYX_TYPE_MODULE_PREFIX __PYX_ABI_MODULE_NAME "."
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- #define CYTHON_HEX_VERSION 0x030007F0
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+ #define CYTHON_HEX_VERSION 0x03000AF0
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  #define CYTHON_FUTURE_DIVISION 1
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  #include <stddef.h>
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  #ifndef offsetof
@@ -132,6 +132,8 @@ END: Cython Metadata */
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  #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
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  #define CYTHON_UPDATE_DESCRIPTOR_DOC 0
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  #endif
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+ #undef CYTHON_USE_FREELISTS
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+ #define CYTHON_USE_FREELISTS 0
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  #elif defined(PYPY_VERSION)
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  #define CYTHON_COMPILING_IN_PYPY 1
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  #define CYTHON_COMPILING_IN_CPYTHON 0
@@ -193,6 +195,8 @@ END: Cython Metadata */
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  #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
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  #define CYTHON_UPDATE_DESCRIPTOR_DOC 0
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  #endif
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+ #undef CYTHON_USE_FREELISTS
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+ #define CYTHON_USE_FREELISTS 0
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  #elif defined(CYTHON_LIMITED_API)
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  #ifdef Py_LIMITED_API
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  #undef __PYX_LIMITED_VERSION_HEX
@@ -254,6 +258,8 @@ END: Cython Metadata */
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  #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
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  #define CYTHON_UPDATE_DESCRIPTOR_DOC 0
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  #endif
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+ #undef CYTHON_USE_FREELISTS
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+ #define CYTHON_USE_FREELISTS 0
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  #elif defined(Py_GIL_DISABLED) || defined(Py_NOGIL)
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  #define CYTHON_COMPILING_IN_PYPY 0
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  #define CYTHON_COMPILING_IN_CPYTHON 0
@@ -263,11 +269,17 @@ END: Cython Metadata */
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  #ifndef CYTHON_USE_TYPE_SLOTS
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  #define CYTHON_USE_TYPE_SLOTS 1
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  #endif
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+ #ifndef CYTHON_USE_TYPE_SPECS
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+ #define CYTHON_USE_TYPE_SPECS 0
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+ #endif
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  #undef CYTHON_USE_PYTYPE_LOOKUP
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  #define CYTHON_USE_PYTYPE_LOOKUP 0
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  #ifndef CYTHON_USE_ASYNC_SLOTS
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  #define CYTHON_USE_ASYNC_SLOTS 1
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  #endif
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+ #ifndef CYTHON_USE_PYLONG_INTERNALS
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+ #define CYTHON_USE_PYLONG_INTERNALS 0
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+ #endif
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  #undef CYTHON_USE_PYLIST_INTERNALS
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  #define CYTHON_USE_PYLIST_INTERNALS 0
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  #ifndef CYTHON_USE_UNICODE_INTERNALS
@@ -275,8 +287,6 @@ END: Cython Metadata */
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  #endif
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- #undef CYTHON_USE_PYLONG_INTERNALS
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- #define CYTHON_USE_PYLONG_INTERNALS 0
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  #ifndef CYTHON_AVOID_BORROWED_REFS
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  #define CYTHON_AVOID_BORROWED_REFS 0
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  #endif
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  #endif
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  #undef CYTHON_FAST_THREAD_STATE
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  #define CYTHON_FAST_THREAD_STATE 0
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+ #undef CYTHON_FAST_GIL
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+ #define CYTHON_FAST_GIL 0
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+ #ifndef CYTHON_METH_FASTCALL
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+ #define CYTHON_METH_FASTCALL 1
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+ #endif
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  #undef CYTHON_FAST_PYCALL
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  #define CYTHON_FAST_PYCALL 0
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+ #ifndef CYTHON_PEP487_INIT_SUBCLASS
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+ #define CYTHON_PEP487_INIT_SUBCLASS 1
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+ #endif
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  #ifndef CYTHON_PEP489_MULTI_PHASE_INIT
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  #define CYTHON_PEP489_MULTI_PHASE_INIT 1
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  #endif
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+ #ifndef CYTHON_USE_MODULE_STATE
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+ #define CYTHON_USE_MODULE_STATE 0
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+ #endif
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  #ifndef CYTHON_USE_TP_FINALIZE
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  #define CYTHON_USE_TP_FINALIZE 1
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  #endif
@@ -300,6 +321,12 @@ END: Cython Metadata */
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  #define CYTHON_USE_DICT_VERSIONS 0
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  #define CYTHON_USE_EXC_INFO_STACK 0
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+ #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC
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+ #define CYTHON_UPDATE_DESCRIPTOR_DOC 1
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+ #endif
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+ #ifndef CYTHON_USE_FREELISTS
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+ #define CYTHON_USE_FREELISTS 0
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+ #endif
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  #define CYTHON_COMPILING_IN_PYPY 0
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  #define CYTHON_COMPILING_IN_CPYTHON 1
@@ -390,6 +417,9 @@ END: Cython Metadata */
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+ #ifndef CYTHON_USE_FREELISTS
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+ #define CYTHON_USE_FREELISTS 1
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+ #endif
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@@ -582,14 +612,14 @@ END: Cython Metadata */
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+ PyObject *version_info;
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  #endif
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@@ -647,7 +677,7 @@ END: Cython Metadata */
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@@ -733,8 +763,13 @@ END: Cython Metadata */
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+ # define __Pyx_PyCFunctionFast PyCFunctionFast
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+ # define __Pyx_PyCFunctionFastWithKeywords PyCFunctionFastWithKeywords
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+ # define __Pyx_PyCFunctionFast _PyCFunctionFast
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+ # define __Pyx_PyCFunctionFastWithKeywords _PyCFunctionFastWithKeywords
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@@ -1086,7 +1121,7 @@ static CYTHON_INLINE PyObject * __Pyx_PyDict_GetItemStrWithError(PyObject *dict,
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@@ -1286,24 +1321,7 @@ static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*);
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1510
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1512
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1513
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@@ -1516,7 +1534,7 @@ static const char *__pyx_f[] = {
1516
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1519
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1521
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@@ -1525,7 +1543,7 @@ typedef npy_int8 __pyx_t_5numpy_int8_t;
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1528
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1530
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1531
1549
  * ctypedef npy_int32 int32_t # <<<<<<<<<<<<<<
@@ -1534,7 +1552,7 @@ typedef npy_int16 __pyx_t_5numpy_int16_t;
1534
1552
  */
1535
1553
  typedef npy_int32 __pyx_t_5numpy_int32_t;
1536
1554
 
1537
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":735
1555
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":735
1538
1556
  * ctypedef npy_int16 int16_t
1539
1557
  * ctypedef npy_int32 int32_t
1540
1558
  * ctypedef npy_int64 int64_t # <<<<<<<<<<<<<<
@@ -1543,7 +1561,7 @@ typedef npy_int32 __pyx_t_5numpy_int32_t;
1543
1561
  */
1544
1562
  typedef npy_int64 __pyx_t_5numpy_int64_t;
1545
1563
 
1546
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":739
1564
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":739
1547
1565
  * #ctypedef npy_int128 int128_t
1548
1566
  *
1549
1567
  * ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<<
@@ -1552,7 +1570,7 @@ typedef npy_int64 __pyx_t_5numpy_int64_t;
1552
1570
  */
1553
1571
  typedef npy_uint8 __pyx_t_5numpy_uint8_t;
1554
1572
 
1555
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":740
1573
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":740
1556
1574
  *
1557
1575
  * ctypedef npy_uint8 uint8_t
1558
1576
  * ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<<
@@ -1561,7 +1579,7 @@ typedef npy_uint8 __pyx_t_5numpy_uint8_t;
1561
1579
  */
1562
1580
  typedef npy_uint16 __pyx_t_5numpy_uint16_t;
1563
1581
 
1564
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":741
1582
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":741
1565
1583
  * ctypedef npy_uint8 uint8_t
1566
1584
  * ctypedef npy_uint16 uint16_t
1567
1585
  * ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<<
@@ -1570,7 +1588,7 @@ typedef npy_uint16 __pyx_t_5numpy_uint16_t;
1570
1588
  */
1571
1589
  typedef npy_uint32 __pyx_t_5numpy_uint32_t;
1572
1590
 
1573
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":742
1591
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":742
1574
1592
  * ctypedef npy_uint16 uint16_t
1575
1593
  * ctypedef npy_uint32 uint32_t
1576
1594
  * ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<<
@@ -1579,7 +1597,7 @@ typedef npy_uint32 __pyx_t_5numpy_uint32_t;
1579
1597
  */
1580
1598
  typedef npy_uint64 __pyx_t_5numpy_uint64_t;
1581
1599
 
1582
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":746
1600
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":746
1583
1601
  * #ctypedef npy_uint128 uint128_t
1584
1602
  *
1585
1603
  * ctypedef npy_float32 float32_t # <<<<<<<<<<<<<<
@@ -1588,7 +1606,7 @@ typedef npy_uint64 __pyx_t_5numpy_uint64_t;
1588
1606
  */
1589
1607
  typedef npy_float32 __pyx_t_5numpy_float32_t;
1590
1608
 
1591
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":747
1609
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":747
1592
1610
  *
1593
1611
  * ctypedef npy_float32 float32_t
1594
1612
  * ctypedef npy_float64 float64_t # <<<<<<<<<<<<<<
@@ -1597,7 +1615,7 @@ typedef npy_float32 __pyx_t_5numpy_float32_t;
1597
1615
  */
1598
1616
  typedef npy_float64 __pyx_t_5numpy_float64_t;
1599
1617
 
1600
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":756
1618
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":756
1601
1619
  * # The int types are mapped a bit surprising --
1602
1620
  * # numpy.int corresponds to 'l' and numpy.long to 'q'
1603
1621
  * ctypedef npy_long int_t # <<<<<<<<<<<<<<
@@ -1606,7 +1624,7 @@ typedef npy_float64 __pyx_t_5numpy_float64_t;
1606
1624
  */
1607
1625
  typedef npy_long __pyx_t_5numpy_int_t;
1608
1626
 
1609
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":757
1627
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":757
1610
1628
  * # numpy.int corresponds to 'l' and numpy.long to 'q'
1611
1629
  * ctypedef npy_long int_t
1612
1630
  * ctypedef npy_longlong long_t # <<<<<<<<<<<<<<
@@ -1615,7 +1633,7 @@ typedef npy_long __pyx_t_5numpy_int_t;
1615
1633
  */
1616
1634
  typedef npy_longlong __pyx_t_5numpy_long_t;
1617
1635
 
1618
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":758
1636
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":758
1619
1637
  * ctypedef npy_long int_t
1620
1638
  * ctypedef npy_longlong long_t
1621
1639
  * ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<<
@@ -1624,7 +1642,7 @@ typedef npy_longlong __pyx_t_5numpy_long_t;
1624
1642
  */
1625
1643
  typedef npy_longlong __pyx_t_5numpy_longlong_t;
1626
1644
 
1627
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":760
1645
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":760
1628
1646
  * ctypedef npy_longlong longlong_t
1629
1647
  *
1630
1648
  * ctypedef npy_ulong uint_t # <<<<<<<<<<<<<<
@@ -1633,7 +1651,7 @@ typedef npy_longlong __pyx_t_5numpy_longlong_t;
1633
1651
  */
1634
1652
  typedef npy_ulong __pyx_t_5numpy_uint_t;
1635
1653
 
1636
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":761
1654
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":761
1637
1655
  *
1638
1656
  * ctypedef npy_ulong uint_t
1639
1657
  * ctypedef npy_ulonglong ulong_t # <<<<<<<<<<<<<<
@@ -1642,7 +1660,7 @@ typedef npy_ulong __pyx_t_5numpy_uint_t;
1642
1660
  */
1643
1661
  typedef npy_ulonglong __pyx_t_5numpy_ulong_t;
1644
1662
 
1645
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":762
1663
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":762
1646
1664
  * ctypedef npy_ulong uint_t
1647
1665
  * ctypedef npy_ulonglong ulong_t
1648
1666
  * ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<<
@@ -1651,7 +1669,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulong_t;
1651
1669
  */
1652
1670
  typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t;
1653
1671
 
1654
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":764
1672
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":764
1655
1673
  * ctypedef npy_ulonglong ulonglong_t
1656
1674
  *
1657
1675
  * ctypedef npy_intp intp_t # <<<<<<<<<<<<<<
@@ -1660,7 +1678,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t;
1660
1678
  */
1661
1679
  typedef npy_intp __pyx_t_5numpy_intp_t;
1662
1680
 
1663
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":765
1681
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":765
1664
1682
  *
1665
1683
  * ctypedef npy_intp intp_t
1666
1684
  * ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<<
@@ -1669,7 +1687,7 @@ typedef npy_intp __pyx_t_5numpy_intp_t;
1669
1687
  */
1670
1688
  typedef npy_uintp __pyx_t_5numpy_uintp_t;
1671
1689
 
1672
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":767
1690
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":767
1673
1691
  * ctypedef npy_uintp uintp_t
1674
1692
  *
1675
1693
  * ctypedef npy_double float_t # <<<<<<<<<<<<<<
@@ -1678,7 +1696,7 @@ typedef npy_uintp __pyx_t_5numpy_uintp_t;
1678
1696
  */
1679
1697
  typedef npy_double __pyx_t_5numpy_float_t;
1680
1698
 
1681
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":768
1699
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":768
1682
1700
  *
1683
1701
  * ctypedef npy_double float_t
1684
1702
  * ctypedef npy_double double_t # <<<<<<<<<<<<<<
@@ -1687,7 +1705,7 @@ typedef npy_double __pyx_t_5numpy_float_t;
1687
1705
  */
1688
1706
  typedef npy_double __pyx_t_5numpy_double_t;
1689
1707
 
1690
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":769
1708
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":769
1691
1709
  * ctypedef npy_double float_t
1692
1710
  * ctypedef npy_double double_t
1693
1711
  * ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<<
@@ -1727,7 +1745,7 @@ struct __pyx_obj_7biotite_8sequence_5phylo_4tree_TreeNode;
1727
1745
  struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph;
1728
1746
  struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr;
1729
1747
 
1730
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":771
1748
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":771
1731
1749
  * ctypedef npy_longdouble longdouble_t
1732
1750
  *
1733
1751
  * ctypedef npy_cfloat cfloat_t # <<<<<<<<<<<<<<
@@ -1736,7 +1754,7 @@ struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr;
1736
1754
  */
1737
1755
  typedef npy_cfloat __pyx_t_5numpy_cfloat_t;
1738
1756
 
1739
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":772
1757
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":772
1740
1758
  *
1741
1759
  * ctypedef npy_cfloat cfloat_t
1742
1760
  * ctypedef npy_cdouble cdouble_t # <<<<<<<<<<<<<<
@@ -1745,7 +1763,7 @@ typedef npy_cfloat __pyx_t_5numpy_cfloat_t;
1745
1763
  */
1746
1764
  typedef npy_cdouble __pyx_t_5numpy_cdouble_t;
1747
1765
 
1748
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":773
1766
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":773
1749
1767
  * ctypedef npy_cfloat cfloat_t
1750
1768
  * ctypedef npy_cdouble cdouble_t
1751
1769
  * ctypedef npy_clongdouble clongdouble_t # <<<<<<<<<<<<<<
@@ -1754,7 +1772,7 @@ typedef npy_cdouble __pyx_t_5numpy_cdouble_t;
1754
1772
  */
1755
1773
  typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t;
1756
1774
 
1757
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":775
1775
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":775
1758
1776
  * ctypedef npy_clongdouble clongdouble_t
1759
1777
  *
1760
1778
  * ctypedef npy_cdouble complex_t # <<<<<<<<<<<<<<
@@ -2016,8 +2034,8 @@ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int
2016
2034
  #define __Pyx_Arg_NewRef_VARARGS(arg) __Pyx_NewRef(arg)
2017
2035
  #define __Pyx_Arg_XDECREF_VARARGS(arg) Py_XDECREF(arg)
2018
2036
  #else
2019
- #define __Pyx_Arg_NewRef_VARARGS(arg) arg // no-op
2020
- #define __Pyx_Arg_XDECREF_VARARGS(arg) // no-op - arg is borrowed
2037
+ #define __Pyx_Arg_NewRef_VARARGS(arg) arg
2038
+ #define __Pyx_Arg_XDECREF_VARARGS(arg)
2021
2039
  #endif
2022
2040
  #define __Pyx_NumKwargs_VARARGS(kwds) PyDict_Size(kwds)
2023
2041
  #define __Pyx_KwValues_VARARGS(args, nargs) NULL
@@ -2033,8 +2051,9 @@ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int
2033
2051
  #else
2034
2052
  #define __Pyx_KwargsAsDict_FASTCALL(kw, kwvalues) _PyStack_AsDict(kwvalues, kw)
2035
2053
  #endif
2036
- #define __Pyx_Arg_NewRef_FASTCALL(arg) arg // no-op, __Pyx_Arg_FASTCALL is direct and this needs
2037
- #define __Pyx_Arg_XDECREF_FASTCALL(arg) // no-op - arg was returned from array
2054
+ #define __Pyx_Arg_NewRef_FASTCALL(arg) arg /* no-op, __Pyx_Arg_FASTCALL is direct and this needs
2055
+ to have the same reference counting */
2056
+ #define __Pyx_Arg_XDECREF_FASTCALL(arg)
2038
2057
  #else
2039
2058
  #define __Pyx_Arg_FASTCALL __Pyx_Arg_VARARGS
2040
2059
  #define __Pyx_NumKwargs_FASTCALL __Pyx_NumKwargs_VARARGS
@@ -2661,22 +2680,22 @@ static int __Pyx_setup_reduce(PyObject* type_obj);
2661
2680
  #endif
2662
2681
 
2663
2682
  /* TypeImport.proto */
2664
- #ifndef __PYX_HAVE_RT_ImportType_proto_3_0_7
2665
- #define __PYX_HAVE_RT_ImportType_proto_3_0_7
2683
+ #ifndef __PYX_HAVE_RT_ImportType_proto_3_0_10
2684
+ #define __PYX_HAVE_RT_ImportType_proto_3_0_10
2666
2685
  #if defined (__STDC_VERSION__) && __STDC_VERSION__ >= 201112L
2667
2686
  #include <stdalign.h>
2668
2687
  #endif
2669
2688
  #if (defined (__STDC_VERSION__) && __STDC_VERSION__ >= 201112L) || __cplusplus >= 201103L
2670
- #define __PYX_GET_STRUCT_ALIGNMENT_3_0_7(s) alignof(s)
2689
+ #define __PYX_GET_STRUCT_ALIGNMENT_3_0_10(s) alignof(s)
2671
2690
  #else
2672
- #define __PYX_GET_STRUCT_ALIGNMENT_3_0_7(s) sizeof(void*)
2691
+ #define __PYX_GET_STRUCT_ALIGNMENT_3_0_10(s) sizeof(void*)
2673
2692
  #endif
2674
- enum __Pyx_ImportType_CheckSize_3_0_7 {
2675
- __Pyx_ImportType_CheckSize_Error_3_0_7 = 0,
2676
- __Pyx_ImportType_CheckSize_Warn_3_0_7 = 1,
2677
- __Pyx_ImportType_CheckSize_Ignore_3_0_7 = 2
2693
+ enum __Pyx_ImportType_CheckSize_3_0_10 {
2694
+ __Pyx_ImportType_CheckSize_Error_3_0_10 = 0,
2695
+ __Pyx_ImportType_CheckSize_Warn_3_0_10 = 1,
2696
+ __Pyx_ImportType_CheckSize_Ignore_3_0_10 = 2
2678
2697
  };
2679
- static PyTypeObject *__Pyx_ImportType_3_0_7(PyObject* module, const char *module_name, const char *class_name, size_t size, size_t alignment, enum __Pyx_ImportType_CheckSize_3_0_7 check_size);
2698
+ static PyTypeObject *__Pyx_ImportType_3_0_10(PyObject* module, const char *module_name, const char *class_name, size_t size, size_t alignment, enum __Pyx_ImportType_CheckSize_3_0_10 check_size);
2680
2699
  #endif
2681
2700
 
2682
2701
  /* Import.proto */
@@ -2787,7 +2806,7 @@ typedef struct {
2787
2806
  #endif
2788
2807
  void *defaults;
2789
2808
  int defaults_pyobjects;
2790
- size_t defaults_size; // used by FusedFunction for copying defaults
2809
+ size_t defaults_size;
2791
2810
  int flags;
2792
2811
  PyObject *defaults_tuple;
2793
2812
  PyObject *defaults_kwdict;
@@ -4813,7 +4832,7 @@ static int __pyx_m_traverse(PyObject *m, visitproc visit, void *arg) {
4813
4832
  #define __pyx_codeobj__64 __pyx_mstate_global->__pyx_codeobj__64
4814
4833
  /* #### Code section: module_code ### */
4815
4834
 
4816
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":246
4835
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":246
4817
4836
  *
4818
4837
  * @property
4819
4838
  * cdef inline PyObject* base(self) nogil: # <<<<<<<<<<<<<<
@@ -4824,7 +4843,7 @@ static int __pyx_m_traverse(PyObject *m, visitproc visit, void *arg) {
4824
4843
  static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject *__pyx_v_self) {
4825
4844
  PyObject *__pyx_r;
4826
4845
 
4827
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":249
4846
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":249
4828
4847
  * """Returns a borrowed reference to the object owning the data/memory.
4829
4848
  * """
4830
4849
  * return PyArray_BASE(self) # <<<<<<<<<<<<<<
@@ -4834,7 +4853,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject
4834
4853
  __pyx_r = PyArray_BASE(__pyx_v_self);
4835
4854
  goto __pyx_L0;
4836
4855
 
4837
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":246
4856
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":246
4838
4857
  *
4839
4858
  * @property
4840
4859
  * cdef inline PyObject* base(self) nogil: # <<<<<<<<<<<<<<
@@ -4847,7 +4866,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_7ndarray_4base_base(PyArrayObject
4847
4866
  return __pyx_r;
4848
4867
  }
4849
4868
 
4850
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":252
4869
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":252
4851
4870
  *
4852
4871
  * @property
4853
4872
  * cdef inline dtype descr(self): # <<<<<<<<<<<<<<
@@ -4861,7 +4880,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
4861
4880
  PyArray_Descr *__pyx_t_1;
4862
4881
  __Pyx_RefNannySetupContext("descr", 1);
4863
4882
 
4864
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":255
4883
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":255
4865
4884
  * """Returns an owned reference to the dtype of the array.
4866
4885
  * """
4867
4886
  * return <dtype>PyArray_DESCR(self) # <<<<<<<<<<<<<<
@@ -4874,7 +4893,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
4874
4893
  __pyx_r = ((PyArray_Descr *)__pyx_t_1);
4875
4894
  goto __pyx_L0;
4876
4895
 
4877
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":252
4896
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":252
4878
4897
  *
4879
4898
  * @property
4880
4899
  * cdef inline dtype descr(self): # <<<<<<<<<<<<<<
@@ -4889,7 +4908,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
4889
4908
  return __pyx_r;
4890
4909
  }
4891
4910
 
4892
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":258
4911
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":258
4893
4912
  *
4894
4913
  * @property
4895
4914
  * cdef inline int ndim(self) nogil: # <<<<<<<<<<<<<<
@@ -4900,7 +4919,7 @@ static CYTHON_INLINE PyArray_Descr *__pyx_f_5numpy_7ndarray_5descr_descr(PyArray
4900
4919
  static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx_v_self) {
4901
4920
  int __pyx_r;
4902
4921
 
4903
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":261
4922
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":261
4904
4923
  * """Returns the number of dimensions in the array.
4905
4924
  * """
4906
4925
  * return PyArray_NDIM(self) # <<<<<<<<<<<<<<
@@ -4910,7 +4929,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx
4910
4929
  __pyx_r = PyArray_NDIM(__pyx_v_self);
4911
4930
  goto __pyx_L0;
4912
4931
 
4913
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":258
4932
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":258
4914
4933
  *
4915
4934
  * @property
4916
4935
  * cdef inline int ndim(self) nogil: # <<<<<<<<<<<<<<
@@ -4923,7 +4942,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx
4923
4942
  return __pyx_r;
4924
4943
  }
4925
4944
 
4926
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":264
4945
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":264
4927
4946
  *
4928
4947
  * @property
4929
4948
  * cdef inline npy_intp *shape(self) nogil: # <<<<<<<<<<<<<<
@@ -4934,7 +4953,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_7ndarray_4ndim_ndim(PyArrayObject *__pyx
4934
4953
  static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObject *__pyx_v_self) {
4935
4954
  npy_intp *__pyx_r;
4936
4955
 
4937
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":269
4956
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":269
4938
4957
  * Can return NULL for 0-dimensional arrays.
4939
4958
  * """
4940
4959
  * return PyArray_DIMS(self) # <<<<<<<<<<<<<<
@@ -4944,7 +4963,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObjec
4944
4963
  __pyx_r = PyArray_DIMS(__pyx_v_self);
4945
4964
  goto __pyx_L0;
4946
4965
 
4947
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":264
4966
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":264
4948
4967
  *
4949
4968
  * @property
4950
4969
  * cdef inline npy_intp *shape(self) nogil: # <<<<<<<<<<<<<<
@@ -4957,7 +4976,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObjec
4957
4976
  return __pyx_r;
4958
4977
  }
4959
4978
 
4960
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":272
4979
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":272
4961
4980
  *
4962
4981
  * @property
4963
4982
  * cdef inline npy_intp *strides(self) nogil: # <<<<<<<<<<<<<<
@@ -4968,7 +4987,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_5shape_shape(PyArrayObjec
4968
4987
  static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayObject *__pyx_v_self) {
4969
4988
  npy_intp *__pyx_r;
4970
4989
 
4971
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":276
4990
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":276
4972
4991
  * The number of elements matches the number of dimensions of the array (ndim).
4973
4992
  * """
4974
4993
  * return PyArray_STRIDES(self) # <<<<<<<<<<<<<<
@@ -4978,7 +4997,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayO
4978
4997
  __pyx_r = PyArray_STRIDES(__pyx_v_self);
4979
4998
  goto __pyx_L0;
4980
4999
 
4981
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":272
5000
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":272
4982
5001
  *
4983
5002
  * @property
4984
5003
  * cdef inline npy_intp *strides(self) nogil: # <<<<<<<<<<<<<<
@@ -4991,7 +5010,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayO
4991
5010
  return __pyx_r;
4992
5011
  }
4993
5012
 
4994
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":279
5013
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":279
4995
5014
  *
4996
5015
  * @property
4997
5016
  * cdef inline npy_intp size(self) nogil: # <<<<<<<<<<<<<<
@@ -5002,7 +5021,7 @@ static CYTHON_INLINE npy_intp *__pyx_f_5numpy_7ndarray_7strides_strides(PyArrayO
5002
5021
  static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *__pyx_v_self) {
5003
5022
  npy_intp __pyx_r;
5004
5023
 
5005
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":282
5024
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":282
5006
5025
  * """Returns the total size (in number of elements) of the array.
5007
5026
  * """
5008
5027
  * return PyArray_SIZE(self) # <<<<<<<<<<<<<<
@@ -5012,7 +5031,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *
5012
5031
  __pyx_r = PyArray_SIZE(__pyx_v_self);
5013
5032
  goto __pyx_L0;
5014
5033
 
5015
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":279
5034
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":279
5016
5035
  *
5017
5036
  * @property
5018
5037
  * cdef inline npy_intp size(self) nogil: # <<<<<<<<<<<<<<
@@ -5025,7 +5044,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *
5025
5044
  return __pyx_r;
5026
5045
  }
5027
5046
 
5028
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":285
5047
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":285
5029
5048
  *
5030
5049
  * @property
5031
5050
  * cdef inline char* data(self) nogil: # <<<<<<<<<<<<<<
@@ -5036,7 +5055,7 @@ static CYTHON_INLINE npy_intp __pyx_f_5numpy_7ndarray_4size_size(PyArrayObject *
5036
5055
  static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__pyx_v_self) {
5037
5056
  char *__pyx_r;
5038
5057
 
5039
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":291
5058
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":291
5040
5059
  * of `PyArray_DATA()` instead, which returns a 'void*'.
5041
5060
  * """
5042
5061
  * return PyArray_BYTES(self) # <<<<<<<<<<<<<<
@@ -5046,7 +5065,7 @@ static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__p
5046
5065
  __pyx_r = PyArray_BYTES(__pyx_v_self);
5047
5066
  goto __pyx_L0;
5048
5067
 
5049
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":285
5068
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":285
5050
5069
  *
5051
5070
  * @property
5052
5071
  * cdef inline char* data(self) nogil: # <<<<<<<<<<<<<<
@@ -5059,7 +5078,7 @@ static CYTHON_INLINE char *__pyx_f_5numpy_7ndarray_4data_data(PyArrayObject *__p
5059
5078
  return __pyx_r;
5060
5079
  }
5061
5080
 
5062
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":777
5081
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":777
5063
5082
  * ctypedef npy_cdouble complex_t
5064
5083
  *
5065
5084
  * cdef inline object PyArray_MultiIterNew1(a): # <<<<<<<<<<<<<<
@@ -5076,7 +5095,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__
5076
5095
  int __pyx_clineno = 0;
5077
5096
  __Pyx_RefNannySetupContext("PyArray_MultiIterNew1", 1);
5078
5097
 
5079
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":778
5098
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":778
5080
5099
  *
5081
5100
  * cdef inline object PyArray_MultiIterNew1(a):
5082
5101
  * return PyArray_MultiIterNew(1, <void*>a) # <<<<<<<<<<<<<<
@@ -5090,7 +5109,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__
5090
5109
  __pyx_t_1 = 0;
5091
5110
  goto __pyx_L0;
5092
5111
 
5093
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":777
5112
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":777
5094
5113
  * ctypedef npy_cdouble complex_t
5095
5114
  *
5096
5115
  * cdef inline object PyArray_MultiIterNew1(a): # <<<<<<<<<<<<<<
@@ -5109,7 +5128,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__
5109
5128
  return __pyx_r;
5110
5129
  }
5111
5130
 
5112
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":780
5131
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":780
5113
5132
  * return PyArray_MultiIterNew(1, <void*>a)
5114
5133
  *
5115
5134
  * cdef inline object PyArray_MultiIterNew2(a, b): # <<<<<<<<<<<<<<
@@ -5126,7 +5145,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__
5126
5145
  int __pyx_clineno = 0;
5127
5146
  __Pyx_RefNannySetupContext("PyArray_MultiIterNew2", 1);
5128
5147
 
5129
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":781
5148
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":781
5130
5149
  *
5131
5150
  * cdef inline object PyArray_MultiIterNew2(a, b):
5132
5151
  * return PyArray_MultiIterNew(2, <void*>a, <void*>b) # <<<<<<<<<<<<<<
@@ -5140,7 +5159,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__
5140
5159
  __pyx_t_1 = 0;
5141
5160
  goto __pyx_L0;
5142
5161
 
5143
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":780
5162
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":780
5144
5163
  * return PyArray_MultiIterNew(1, <void*>a)
5145
5164
  *
5146
5165
  * cdef inline object PyArray_MultiIterNew2(a, b): # <<<<<<<<<<<<<<
@@ -5159,7 +5178,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__
5159
5178
  return __pyx_r;
5160
5179
  }
5161
5180
 
5162
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":783
5181
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":783
5163
5182
  * return PyArray_MultiIterNew(2, <void*>a, <void*>b)
5164
5183
  *
5165
5184
  * cdef inline object PyArray_MultiIterNew3(a, b, c): # <<<<<<<<<<<<<<
@@ -5176,7 +5195,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__
5176
5195
  int __pyx_clineno = 0;
5177
5196
  __Pyx_RefNannySetupContext("PyArray_MultiIterNew3", 1);
5178
5197
 
5179
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":784
5198
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":784
5180
5199
  *
5181
5200
  * cdef inline object PyArray_MultiIterNew3(a, b, c):
5182
5201
  * return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c) # <<<<<<<<<<<<<<
@@ -5190,7 +5209,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__
5190
5209
  __pyx_t_1 = 0;
5191
5210
  goto __pyx_L0;
5192
5211
 
5193
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":783
5212
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":783
5194
5213
  * return PyArray_MultiIterNew(2, <void*>a, <void*>b)
5195
5214
  *
5196
5215
  * cdef inline object PyArray_MultiIterNew3(a, b, c): # <<<<<<<<<<<<<<
@@ -5209,7 +5228,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__
5209
5228
  return __pyx_r;
5210
5229
  }
5211
5230
 
5212
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":786
5231
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":786
5213
5232
  * return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
5214
5233
  *
5215
5234
  * cdef inline object PyArray_MultiIterNew4(a, b, c, d): # <<<<<<<<<<<<<<
@@ -5226,7 +5245,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__
5226
5245
  int __pyx_clineno = 0;
5227
5246
  __Pyx_RefNannySetupContext("PyArray_MultiIterNew4", 1);
5228
5247
 
5229
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":787
5248
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":787
5230
5249
  *
5231
5250
  * cdef inline object PyArray_MultiIterNew4(a, b, c, d):
5232
5251
  * return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d) # <<<<<<<<<<<<<<
@@ -5240,7 +5259,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__
5240
5259
  __pyx_t_1 = 0;
5241
5260
  goto __pyx_L0;
5242
5261
 
5243
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":786
5262
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":786
5244
5263
  * return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
5245
5264
  *
5246
5265
  * cdef inline object PyArray_MultiIterNew4(a, b, c, d): # <<<<<<<<<<<<<<
@@ -5259,7 +5278,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__
5259
5278
  return __pyx_r;
5260
5279
  }
5261
5280
 
5262
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":789
5281
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":789
5263
5282
  * return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
5264
5283
  *
5265
5284
  * cdef inline object PyArray_MultiIterNew5(a, b, c, d, e): # <<<<<<<<<<<<<<
@@ -5276,7 +5295,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__
5276
5295
  int __pyx_clineno = 0;
5277
5296
  __Pyx_RefNannySetupContext("PyArray_MultiIterNew5", 1);
5278
5297
 
5279
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":790
5298
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":790
5280
5299
  *
5281
5300
  * cdef inline object PyArray_MultiIterNew5(a, b, c, d, e):
5282
5301
  * return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e) # <<<<<<<<<<<<<<
@@ -5290,7 +5309,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__
5290
5309
  __pyx_t_1 = 0;
5291
5310
  goto __pyx_L0;
5292
5311
 
5293
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":789
5312
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":789
5294
5313
  * return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
5295
5314
  *
5296
5315
  * cdef inline object PyArray_MultiIterNew5(a, b, c, d, e): # <<<<<<<<<<<<<<
@@ -5309,7 +5328,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__
5309
5328
  return __pyx_r;
5310
5329
  }
5311
5330
 
5312
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":792
5331
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":792
5313
5332
  * return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
5314
5333
  *
5315
5334
  * cdef inline tuple PyDataType_SHAPE(dtype d): # <<<<<<<<<<<<<<
@@ -5323,7 +5342,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
5323
5342
  int __pyx_t_1;
5324
5343
  __Pyx_RefNannySetupContext("PyDataType_SHAPE", 1);
5325
5344
 
5326
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":793
5345
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":793
5327
5346
  *
5328
5347
  * cdef inline tuple PyDataType_SHAPE(dtype d):
5329
5348
  * if PyDataType_HASSUBARRAY(d): # <<<<<<<<<<<<<<
@@ -5333,7 +5352,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
5333
5352
  __pyx_t_1 = PyDataType_HASSUBARRAY(__pyx_v_d);
5334
5353
  if (__pyx_t_1) {
5335
5354
 
5336
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":794
5355
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":794
5337
5356
  * cdef inline tuple PyDataType_SHAPE(dtype d):
5338
5357
  * if PyDataType_HASSUBARRAY(d):
5339
5358
  * return <tuple>d.subarray.shape # <<<<<<<<<<<<<<
@@ -5345,7 +5364,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
5345
5364
  __pyx_r = ((PyObject*)__pyx_v_d->subarray->shape);
5346
5365
  goto __pyx_L0;
5347
5366
 
5348
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":793
5367
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":793
5349
5368
  *
5350
5369
  * cdef inline tuple PyDataType_SHAPE(dtype d):
5351
5370
  * if PyDataType_HASSUBARRAY(d): # <<<<<<<<<<<<<<
@@ -5354,7 +5373,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
5354
5373
  */
5355
5374
  }
5356
5375
 
5357
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":796
5376
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":796
5358
5377
  * return <tuple>d.subarray.shape
5359
5378
  * else:
5360
5379
  * return () # <<<<<<<<<<<<<<
@@ -5368,7 +5387,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
5368
5387
  goto __pyx_L0;
5369
5388
  }
5370
5389
 
5371
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":792
5390
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":792
5372
5391
  * return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
5373
5392
  *
5374
5393
  * cdef inline tuple PyDataType_SHAPE(dtype d): # <<<<<<<<<<<<<<
@@ -5383,7 +5402,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
5383
5402
  return __pyx_r;
5384
5403
  }
5385
5404
 
5386
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":971
5405
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":971
5387
5406
  * int _import_umath() except -1
5388
5407
  *
5389
5408
  * cdef inline void set_array_base(ndarray arr, object base): # <<<<<<<<<<<<<<
@@ -5393,7 +5412,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyDataType_SHAPE(PyArray_Descr *__
5393
5412
 
5394
5413
  static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_arr, PyObject *__pyx_v_base) {
5395
5414
 
5396
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":972
5415
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":972
5397
5416
  *
5398
5417
  * cdef inline void set_array_base(ndarray arr, object base):
5399
5418
  * Py_INCREF(base) # important to do this before stealing the reference below! # <<<<<<<<<<<<<<
@@ -5402,7 +5421,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
5402
5421
  */
5403
5422
  Py_INCREF(__pyx_v_base);
5404
5423
 
5405
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":973
5424
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":973
5406
5425
  * cdef inline void set_array_base(ndarray arr, object base):
5407
5426
  * Py_INCREF(base) # important to do this before stealing the reference below!
5408
5427
  * PyArray_SetBaseObject(arr, base) # <<<<<<<<<<<<<<
@@ -5411,7 +5430,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
5411
5430
  */
5412
5431
  (void)(PyArray_SetBaseObject(__pyx_v_arr, __pyx_v_base));
5413
5432
 
5414
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":971
5433
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":971
5415
5434
  * int _import_umath() except -1
5416
5435
  *
5417
5436
  * cdef inline void set_array_base(ndarray arr, object base): # <<<<<<<<<<<<<<
@@ -5422,7 +5441,7 @@ static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_a
5422
5441
  /* function exit code */
5423
5442
  }
5424
5443
 
5425
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":975
5444
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":975
5426
5445
  * PyArray_SetBaseObject(arr, base)
5427
5446
  *
5428
5447
  * cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<<
@@ -5437,7 +5456,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
5437
5456
  int __pyx_t_1;
5438
5457
  __Pyx_RefNannySetupContext("get_array_base", 1);
5439
5458
 
5440
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":976
5459
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":976
5441
5460
  *
5442
5461
  * cdef inline object get_array_base(ndarray arr):
5443
5462
  * base = PyArray_BASE(arr) # <<<<<<<<<<<<<<
@@ -5446,7 +5465,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
5446
5465
  */
5447
5466
  __pyx_v_base = PyArray_BASE(__pyx_v_arr);
5448
5467
 
5449
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":977
5468
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":977
5450
5469
  * cdef inline object get_array_base(ndarray arr):
5451
5470
  * base = PyArray_BASE(arr)
5452
5471
  * if base is NULL: # <<<<<<<<<<<<<<
@@ -5456,7 +5475,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
5456
5475
  __pyx_t_1 = (__pyx_v_base == NULL);
5457
5476
  if (__pyx_t_1) {
5458
5477
 
5459
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":978
5478
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":978
5460
5479
  * base = PyArray_BASE(arr)
5461
5480
  * if base is NULL:
5462
5481
  * return None # <<<<<<<<<<<<<<
@@ -5467,7 +5486,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
5467
5486
  __pyx_r = Py_None; __Pyx_INCREF(Py_None);
5468
5487
  goto __pyx_L0;
5469
5488
 
5470
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":977
5489
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":977
5471
5490
  * cdef inline object get_array_base(ndarray arr):
5472
5491
  * base = PyArray_BASE(arr)
5473
5492
  * if base is NULL: # <<<<<<<<<<<<<<
@@ -5476,7 +5495,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
5476
5495
  */
5477
5496
  }
5478
5497
 
5479
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":979
5498
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":979
5480
5499
  * if base is NULL:
5481
5500
  * return None
5482
5501
  * return <object>base # <<<<<<<<<<<<<<
@@ -5488,7 +5507,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
5488
5507
  __pyx_r = ((PyObject *)__pyx_v_base);
5489
5508
  goto __pyx_L0;
5490
5509
 
5491
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":975
5510
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":975
5492
5511
  * PyArray_SetBaseObject(arr, base)
5493
5512
  *
5494
5513
  * cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<<
@@ -5503,7 +5522,7 @@ static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__py
5503
5522
  return __pyx_r;
5504
5523
  }
5505
5524
 
5506
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":983
5525
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":983
5507
5526
  * # Versions of the import_* functions which are more suitable for
5508
5527
  * # Cython code.
5509
5528
  * cdef inline int import_array() except -1: # <<<<<<<<<<<<<<
@@ -5527,7 +5546,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
5527
5546
  int __pyx_clineno = 0;
5528
5547
  __Pyx_RefNannySetupContext("import_array", 1);
5529
5548
 
5530
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":984
5549
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":984
5531
5550
  * # Cython code.
5532
5551
  * cdef inline int import_array() except -1:
5533
5552
  * try: # <<<<<<<<<<<<<<
@@ -5543,7 +5562,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
5543
5562
  __Pyx_XGOTREF(__pyx_t_3);
5544
5563
  /*try:*/ {
5545
5564
 
5546
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":985
5565
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":985
5547
5566
  * cdef inline int import_array() except -1:
5548
5567
  * try:
5549
5568
  * __pyx_import_array() # <<<<<<<<<<<<<<
@@ -5552,7 +5571,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
5552
5571
  */
5553
5572
  __pyx_t_4 = _import_array(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(1, 985, __pyx_L3_error)
5554
5573
 
5555
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":984
5574
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":984
5556
5575
  * # Cython code.
5557
5576
  * cdef inline int import_array() except -1:
5558
5577
  * try: # <<<<<<<<<<<<<<
@@ -5566,7 +5585,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
5566
5585
  goto __pyx_L8_try_end;
5567
5586
  __pyx_L3_error:;
5568
5587
 
5569
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":986
5588
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":986
5570
5589
  * try:
5571
5590
  * __pyx_import_array()
5572
5591
  * except Exception: # <<<<<<<<<<<<<<
@@ -5581,7 +5600,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
5581
5600
  __Pyx_XGOTREF(__pyx_t_6);
5582
5601
  __Pyx_XGOTREF(__pyx_t_7);
5583
5602
 
5584
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":987
5603
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":987
5585
5604
  * __pyx_import_array()
5586
5605
  * except Exception:
5587
5606
  * raise ImportError("numpy.core.multiarray failed to import") # <<<<<<<<<<<<<<
@@ -5596,7 +5615,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
5596
5615
  }
5597
5616
  goto __pyx_L5_except_error;
5598
5617
 
5599
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":984
5618
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":984
5600
5619
  * # Cython code.
5601
5620
  * cdef inline int import_array() except -1:
5602
5621
  * try: # <<<<<<<<<<<<<<
@@ -5612,7 +5631,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
5612
5631
  __pyx_L8_try_end:;
5613
5632
  }
5614
5633
 
5615
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":983
5634
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":983
5616
5635
  * # Versions of the import_* functions which are more suitable for
5617
5636
  * # Cython code.
5618
5637
  * cdef inline int import_array() except -1: # <<<<<<<<<<<<<<
@@ -5635,7 +5654,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_array(void) {
5635
5654
  return __pyx_r;
5636
5655
  }
5637
5656
 
5638
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":989
5657
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":989
5639
5658
  * raise ImportError("numpy.core.multiarray failed to import")
5640
5659
  *
5641
5660
  * cdef inline int import_umath() except -1: # <<<<<<<<<<<<<<
@@ -5659,7 +5678,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
5659
5678
  int __pyx_clineno = 0;
5660
5679
  __Pyx_RefNannySetupContext("import_umath", 1);
5661
5680
 
5662
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":990
5681
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":990
5663
5682
  *
5664
5683
  * cdef inline int import_umath() except -1:
5665
5684
  * try: # <<<<<<<<<<<<<<
@@ -5675,7 +5694,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
5675
5694
  __Pyx_XGOTREF(__pyx_t_3);
5676
5695
  /*try:*/ {
5677
5696
 
5678
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":991
5697
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":991
5679
5698
  * cdef inline int import_umath() except -1:
5680
5699
  * try:
5681
5700
  * _import_umath() # <<<<<<<<<<<<<<
@@ -5684,7 +5703,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
5684
5703
  */
5685
5704
  __pyx_t_4 = _import_umath(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(1, 991, __pyx_L3_error)
5686
5705
 
5687
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":990
5706
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":990
5688
5707
  *
5689
5708
  * cdef inline int import_umath() except -1:
5690
5709
  * try: # <<<<<<<<<<<<<<
@@ -5698,7 +5717,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
5698
5717
  goto __pyx_L8_try_end;
5699
5718
  __pyx_L3_error:;
5700
5719
 
5701
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":992
5720
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":992
5702
5721
  * try:
5703
5722
  * _import_umath()
5704
5723
  * except Exception: # <<<<<<<<<<<<<<
@@ -5713,7 +5732,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
5713
5732
  __Pyx_XGOTREF(__pyx_t_6);
5714
5733
  __Pyx_XGOTREF(__pyx_t_7);
5715
5734
 
5716
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":993
5735
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":993
5717
5736
  * _import_umath()
5718
5737
  * except Exception:
5719
5738
  * raise ImportError("numpy.core.umath failed to import") # <<<<<<<<<<<<<<
@@ -5728,7 +5747,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
5728
5747
  }
5729
5748
  goto __pyx_L5_except_error;
5730
5749
 
5731
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":990
5750
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":990
5732
5751
  *
5733
5752
  * cdef inline int import_umath() except -1:
5734
5753
  * try: # <<<<<<<<<<<<<<
@@ -5744,7 +5763,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
5744
5763
  __pyx_L8_try_end:;
5745
5764
  }
5746
5765
 
5747
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":989
5766
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":989
5748
5767
  * raise ImportError("numpy.core.multiarray failed to import")
5749
5768
  *
5750
5769
  * cdef inline int import_umath() except -1: # <<<<<<<<<<<<<<
@@ -5767,7 +5786,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_umath(void) {
5767
5786
  return __pyx_r;
5768
5787
  }
5769
5788
 
5770
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":995
5789
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":995
5771
5790
  * raise ImportError("numpy.core.umath failed to import")
5772
5791
  *
5773
5792
  * cdef inline int import_ufunc() except -1: # <<<<<<<<<<<<<<
@@ -5791,7 +5810,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
5791
5810
  int __pyx_clineno = 0;
5792
5811
  __Pyx_RefNannySetupContext("import_ufunc", 1);
5793
5812
 
5794
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":996
5813
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":996
5795
5814
  *
5796
5815
  * cdef inline int import_ufunc() except -1:
5797
5816
  * try: # <<<<<<<<<<<<<<
@@ -5807,7 +5826,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
5807
5826
  __Pyx_XGOTREF(__pyx_t_3);
5808
5827
  /*try:*/ {
5809
5828
 
5810
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":997
5829
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":997
5811
5830
  * cdef inline int import_ufunc() except -1:
5812
5831
  * try:
5813
5832
  * _import_umath() # <<<<<<<<<<<<<<
@@ -5816,7 +5835,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
5816
5835
  */
5817
5836
  __pyx_t_4 = _import_umath(); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(1, 997, __pyx_L3_error)
5818
5837
 
5819
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":996
5838
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":996
5820
5839
  *
5821
5840
  * cdef inline int import_ufunc() except -1:
5822
5841
  * try: # <<<<<<<<<<<<<<
@@ -5830,7 +5849,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
5830
5849
  goto __pyx_L8_try_end;
5831
5850
  __pyx_L3_error:;
5832
5851
 
5833
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":998
5852
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":998
5834
5853
  * try:
5835
5854
  * _import_umath()
5836
5855
  * except Exception: # <<<<<<<<<<<<<<
@@ -5845,7 +5864,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
5845
5864
  __Pyx_XGOTREF(__pyx_t_6);
5846
5865
  __Pyx_XGOTREF(__pyx_t_7);
5847
5866
 
5848
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":999
5867
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":999
5849
5868
  * _import_umath()
5850
5869
  * except Exception:
5851
5870
  * raise ImportError("numpy.core.umath failed to import") # <<<<<<<<<<<<<<
@@ -5860,7 +5879,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
5860
5879
  }
5861
5880
  goto __pyx_L5_except_error;
5862
5881
 
5863
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":996
5882
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":996
5864
5883
  *
5865
5884
  * cdef inline int import_ufunc() except -1:
5866
5885
  * try: # <<<<<<<<<<<<<<
@@ -5876,7 +5895,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
5876
5895
  __pyx_L8_try_end:;
5877
5896
  }
5878
5897
 
5879
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":995
5898
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":995
5880
5899
  * raise ImportError("numpy.core.umath failed to import")
5881
5900
  *
5882
5901
  * cdef inline int import_ufunc() except -1: # <<<<<<<<<<<<<<
@@ -5899,7 +5918,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
5899
5918
  return __pyx_r;
5900
5919
  }
5901
5920
 
5902
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1002
5921
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1002
5903
5922
  *
5904
5923
  *
5905
5924
  * cdef inline bint is_timedelta64_object(object obj): # <<<<<<<<<<<<<<
@@ -5910,7 +5929,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_import_ufunc(void) {
5910
5929
  static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_obj) {
5911
5930
  int __pyx_r;
5912
5931
 
5913
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1014
5932
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1014
5914
5933
  * bool
5915
5934
  * """
5916
5935
  * return PyObject_TypeCheck(obj, &PyTimedeltaArrType_Type) # <<<<<<<<<<<<<<
@@ -5920,7 +5939,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_
5920
5939
  __pyx_r = PyObject_TypeCheck(__pyx_v_obj, (&PyTimedeltaArrType_Type));
5921
5940
  goto __pyx_L0;
5922
5941
 
5923
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1002
5942
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1002
5924
5943
  *
5925
5944
  *
5926
5945
  * cdef inline bint is_timedelta64_object(object obj): # <<<<<<<<<<<<<<
@@ -5933,7 +5952,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_
5933
5952
  return __pyx_r;
5934
5953
  }
5935
5954
 
5936
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1017
5955
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1017
5937
5956
  *
5938
5957
  *
5939
5958
  * cdef inline bint is_datetime64_object(object obj): # <<<<<<<<<<<<<<
@@ -5944,7 +5963,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_timedelta64_object(PyObject *__pyx_v_
5944
5963
  static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_obj) {
5945
5964
  int __pyx_r;
5946
5965
 
5947
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1029
5966
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1029
5948
5967
  * bool
5949
5968
  * """
5950
5969
  * return PyObject_TypeCheck(obj, &PyDatetimeArrType_Type) # <<<<<<<<<<<<<<
@@ -5954,7 +5973,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_o
5954
5973
  __pyx_r = PyObject_TypeCheck(__pyx_v_obj, (&PyDatetimeArrType_Type));
5955
5974
  goto __pyx_L0;
5956
5975
 
5957
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1017
5976
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1017
5958
5977
  *
5959
5978
  *
5960
5979
  * cdef inline bint is_datetime64_object(object obj): # <<<<<<<<<<<<<<
@@ -5967,7 +5986,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_o
5967
5986
  return __pyx_r;
5968
5987
  }
5969
5988
 
5970
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1032
5989
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1032
5971
5990
  *
5972
5991
  *
5973
5992
  * cdef inline npy_datetime get_datetime64_value(object obj) nogil: # <<<<<<<<<<<<<<
@@ -5978,7 +5997,7 @@ static CYTHON_INLINE int __pyx_f_5numpy_is_datetime64_object(PyObject *__pyx_v_o
5978
5997
  static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *__pyx_v_obj) {
5979
5998
  npy_datetime __pyx_r;
5980
5999
 
5981
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1039
6000
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1039
5982
6001
  * also needed. That can be found using `get_datetime64_unit`.
5983
6002
  * """
5984
6003
  * return (<PyDatetimeScalarObject*>obj).obval # <<<<<<<<<<<<<<
@@ -5988,7 +6007,7 @@ static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *
5988
6007
  __pyx_r = ((PyDatetimeScalarObject *)__pyx_v_obj)->obval;
5989
6008
  goto __pyx_L0;
5990
6009
 
5991
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1032
6010
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1032
5992
6011
  *
5993
6012
  *
5994
6013
  * cdef inline npy_datetime get_datetime64_value(object obj) nogil: # <<<<<<<<<<<<<<
@@ -6001,7 +6020,7 @@ static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *
6001
6020
  return __pyx_r;
6002
6021
  }
6003
6022
 
6004
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1042
6023
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1042
6005
6024
  *
6006
6025
  *
6007
6026
  * cdef inline npy_timedelta get_timedelta64_value(object obj) nogil: # <<<<<<<<<<<<<<
@@ -6012,7 +6031,7 @@ static CYTHON_INLINE npy_datetime __pyx_f_5numpy_get_datetime64_value(PyObject *
6012
6031
  static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject *__pyx_v_obj) {
6013
6032
  npy_timedelta __pyx_r;
6014
6033
 
6015
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1046
6034
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1046
6016
6035
  * returns the int64 value underlying scalar numpy timedelta64 object
6017
6036
  * """
6018
6037
  * return (<PyTimedeltaScalarObject*>obj).obval # <<<<<<<<<<<<<<
@@ -6022,7 +6041,7 @@ static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject
6022
6041
  __pyx_r = ((PyTimedeltaScalarObject *)__pyx_v_obj)->obval;
6023
6042
  goto __pyx_L0;
6024
6043
 
6025
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1042
6044
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1042
6026
6045
  *
6027
6046
  *
6028
6047
  * cdef inline npy_timedelta get_timedelta64_value(object obj) nogil: # <<<<<<<<<<<<<<
@@ -6035,7 +6054,7 @@ static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject
6035
6054
  return __pyx_r;
6036
6055
  }
6037
6056
 
6038
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1049
6057
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1049
6039
6058
  *
6040
6059
  *
6041
6060
  * cdef inline NPY_DATETIMEUNIT get_datetime64_unit(object obj) nogil: # <<<<<<<<<<<<<<
@@ -6046,7 +6065,7 @@ static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject
6046
6065
  static CYTHON_INLINE NPY_DATETIMEUNIT __pyx_f_5numpy_get_datetime64_unit(PyObject *__pyx_v_obj) {
6047
6066
  NPY_DATETIMEUNIT __pyx_r;
6048
6067
 
6049
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1053
6068
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1053
6050
6069
  * returns the unit part of the dtype for a numpy datetime64 object.
6051
6070
  * """
6052
6071
  * return <NPY_DATETIMEUNIT>(<PyDatetimeScalarObject*>obj).obmeta.base # <<<<<<<<<<<<<<
@@ -6054,7 +6073,7 @@ static CYTHON_INLINE NPY_DATETIMEUNIT __pyx_f_5numpy_get_datetime64_unit(PyObjec
6054
6073
  __pyx_r = ((NPY_DATETIMEUNIT)((PyDatetimeScalarObject *)__pyx_v_obj)->obmeta.base);
6055
6074
  goto __pyx_L0;
6056
6075
 
6057
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1049
6076
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":1049
6058
6077
  *
6059
6078
  *
6060
6079
  * cdef inline NPY_DATETIMEUNIT get_datetime64_unit(object obj) nogil: # <<<<<<<<<<<<<<
@@ -18568,8 +18587,10 @@ static PyTypeObject __pyx_type_7biotite_8sequence_5phylo_4tree_TreeNode = {
18568
18587
  };
18569
18588
  #endif
18570
18589
 
18590
+ #if CYTHON_USE_FREELISTS
18571
18591
  static struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph *__pyx_freelist_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph[8];
18572
18592
  static int __pyx_freecount_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph = 0;
18593
+ #endif
18573
18594
 
18574
18595
  static PyObject *__pyx_tp_new_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) {
18575
18596
  PyObject *o;
@@ -18577,7 +18598,7 @@ static PyObject *__pyx_tp_new_7biotite_8sequence_5phylo_4tree___pyx_scope_struct
18577
18598
  allocfunc alloc_func = (allocfunc)PyType_GetSlot(t, Py_tp_alloc);
18578
18599
  o = alloc_func(t, 0);
18579
18600
  #else
18580
- #if CYTHON_COMPILING_IN_CPYTHON
18601
+ #if CYTHON_USE_FREELISTS
18581
18602
  if (likely((int)(__pyx_freecount_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph > 0) & (int)(t->tp_basicsize == sizeof(struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph)))) {
18582
18603
  o = (PyObject*)__pyx_freelist_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph[--__pyx_freecount_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph];
18583
18604
  memset(o, 0, sizeof(struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph));
@@ -18604,7 +18625,7 @@ static void __pyx_tp_dealloc_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_
18604
18625
  #endif
18605
18626
  PyObject_GC_UnTrack(o);
18606
18627
  Py_CLEAR(p->__pyx_v_node_repr);
18607
- #if CYTHON_COMPILING_IN_CPYTHON
18628
+ #if CYTHON_USE_FREELISTS
18608
18629
  if (((int)(__pyx_freecount_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph < 8) & (int)(Py_TYPE(o)->tp_basicsize == sizeof(struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph)))) {
18609
18630
  __pyx_freelist_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph[__pyx_freecount_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph++] = ((struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct__as_graph *)o);
18610
18631
  } else
@@ -18737,8 +18758,10 @@ static PyTypeObject __pyx_type_7biotite_8sequence_5phylo_4tree___pyx_scope_struc
18737
18758
  };
18738
18759
  #endif
18739
18760
 
18761
+ #if CYTHON_USE_FREELISTS
18740
18762
  static struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr *__pyx_freelist_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr[8];
18741
18763
  static int __pyx_freecount_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr = 0;
18764
+ #endif
18742
18765
 
18743
18766
  static PyObject *__pyx_tp_new_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) {
18744
18767
  PyObject *o;
@@ -18746,7 +18769,7 @@ static PyObject *__pyx_tp_new_7biotite_8sequence_5phylo_4tree___pyx_scope_struct
18746
18769
  allocfunc alloc_func = (allocfunc)PyType_GetSlot(t, Py_tp_alloc);
18747
18770
  o = alloc_func(t, 0);
18748
18771
  #else
18749
- #if CYTHON_COMPILING_IN_CPYTHON
18772
+ #if CYTHON_USE_FREELISTS
18750
18773
  if (likely((int)(__pyx_freecount_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr > 0) & (int)(t->tp_basicsize == sizeof(struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr)))) {
18751
18774
  o = (PyObject*)__pyx_freelist_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr[--__pyx_freecount_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr];
18752
18775
  memset(o, 0, sizeof(struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr));
@@ -18776,7 +18799,7 @@ static void __pyx_tp_dealloc_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_
18776
18799
  Py_CLEAR(p->__pyx_genexpr_arg_0);
18777
18800
  Py_CLEAR(p->__pyx_v_child);
18778
18801
  Py_CLEAR(p->__pyx_t_0);
18779
- #if CYTHON_COMPILING_IN_CPYTHON
18802
+ #if CYTHON_USE_FREELISTS
18780
18803
  if (((int)(__pyx_freecount_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr < 8) & (int)(Py_TYPE(o)->tp_basicsize == sizeof(struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr)))) {
18781
18804
  __pyx_freelist_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr[__pyx_freecount_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr++] = ((struct __pyx_obj_7biotite_8sequence_5phylo_4tree___pyx_scope_struct_1_genexpr *)o);
18782
18805
  } else
@@ -19173,7 +19196,7 @@ static CYTHON_SMALL_CODE int __Pyx_InitCachedConstants(void) {
19173
19196
  __Pyx_RefNannyDeclarations
19174
19197
  __Pyx_RefNannySetupContext("__Pyx_InitCachedConstants", 0);
19175
19198
 
19176
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":987
19199
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":987
19177
19200
  * __pyx_import_array()
19178
19201
  * except Exception:
19179
19202
  * raise ImportError("numpy.core.multiarray failed to import") # <<<<<<<<<<<<<<
@@ -19184,7 +19207,7 @@ static CYTHON_SMALL_CODE int __Pyx_InitCachedConstants(void) {
19184
19207
  __Pyx_GOTREF(__pyx_tuple_);
19185
19208
  __Pyx_GIVEREF(__pyx_tuple_);
19186
19209
 
19187
- /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-n889v233/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":993
19210
+ /* "C:/Users/runneradmin/AppData/Local/Temp/pip-build-env-teuzpiwx/overlay/Lib/site-packages/numpy/__init__.cython-30.pxd":993
19188
19211
  * _import_umath()
19189
19212
  * except Exception:
19190
19213
  * raise ImportError("numpy.core.umath failed to import") # <<<<<<<<<<<<<<
@@ -19703,33 +19726,33 @@ static int __Pyx_modinit_type_import_code(void) {
19703
19726
  /*--- Type import code ---*/
19704
19727
  __pyx_t_1 = PyImport_ImportModule(__Pyx_BUILTIN_MODULE_NAME); if (unlikely(!__pyx_t_1)) __PYX_ERR(3, 9, __pyx_L1_error)
19705
19728
  __Pyx_GOTREF(__pyx_t_1);
19706
- __pyx_ptype_7cpython_4type_type = __Pyx_ImportType_3_0_7(__pyx_t_1, __Pyx_BUILTIN_MODULE_NAME, "type",
19729
+ __pyx_ptype_7cpython_4type_type = __Pyx_ImportType_3_0_10(__pyx_t_1, __Pyx_BUILTIN_MODULE_NAME, "type",
19707
19730
  #if defined(PYPY_VERSION_NUM) && PYPY_VERSION_NUM < 0x050B0000
19708
- sizeof(PyTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyTypeObject),
19731
+ sizeof(PyTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyTypeObject),
19709
19732
  #elif CYTHON_COMPILING_IN_LIMITED_API
19710
- sizeof(PyTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyTypeObject),
19733
+ sizeof(PyTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyTypeObject),
19711
19734
  #else
19712
- sizeof(PyHeapTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyHeapTypeObject),
19735
+ sizeof(PyHeapTypeObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyHeapTypeObject),
19713
19736
  #endif
19714
- __Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_7cpython_4type_type) __PYX_ERR(3, 9, __pyx_L1_error)
19737
+ __Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_7cpython_4type_type) __PYX_ERR(3, 9, __pyx_L1_error)
19715
19738
  __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
19716
19739
  __pyx_t_1 = PyImport_ImportModule("numpy"); if (unlikely(!__pyx_t_1)) __PYX_ERR(1, 203, __pyx_L1_error)
19717
19740
  __Pyx_GOTREF(__pyx_t_1);
19718
- __pyx_ptype_5numpy_dtype = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "dtype", sizeof(PyArray_Descr), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyArray_Descr),__Pyx_ImportType_CheckSize_Ignore_3_0_7); if (!__pyx_ptype_5numpy_dtype) __PYX_ERR(1, 203, __pyx_L1_error)
19719
- __pyx_ptype_5numpy_flatiter = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "flatiter", sizeof(PyArrayIterObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyArrayIterObject),__Pyx_ImportType_CheckSize_Ignore_3_0_7); if (!__pyx_ptype_5numpy_flatiter) __PYX_ERR(1, 226, __pyx_L1_error)
19720
- __pyx_ptype_5numpy_broadcast = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "broadcast", sizeof(PyArrayMultiIterObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyArrayMultiIterObject),__Pyx_ImportType_CheckSize_Ignore_3_0_7); if (!__pyx_ptype_5numpy_broadcast) __PYX_ERR(1, 230, __pyx_L1_error)
19721
- __pyx_ptype_5numpy_ndarray = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "ndarray", sizeof(PyArrayObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyArrayObject),__Pyx_ImportType_CheckSize_Ignore_3_0_7); if (!__pyx_ptype_5numpy_ndarray) __PYX_ERR(1, 239, __pyx_L1_error)
19722
- __pyx_ptype_5numpy_generic = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "generic", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_5numpy_generic) __PYX_ERR(1, 813, __pyx_L1_error)
19723
- __pyx_ptype_5numpy_number = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "number", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_5numpy_number) __PYX_ERR(1, 815, __pyx_L1_error)
19724
- __pyx_ptype_5numpy_integer = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "integer", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_5numpy_integer) __PYX_ERR(1, 817, __pyx_L1_error)
19725
- __pyx_ptype_5numpy_signedinteger = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "signedinteger", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_5numpy_signedinteger) __PYX_ERR(1, 819, __pyx_L1_error)
19726
- __pyx_ptype_5numpy_unsignedinteger = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "unsignedinteger", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_5numpy_unsignedinteger) __PYX_ERR(1, 821, __pyx_L1_error)
19727
- __pyx_ptype_5numpy_inexact = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "inexact", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_5numpy_inexact) __PYX_ERR(1, 823, __pyx_L1_error)
19728
- __pyx_ptype_5numpy_floating = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "floating", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_5numpy_floating) __PYX_ERR(1, 825, __pyx_L1_error)
19729
- __pyx_ptype_5numpy_complexfloating = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "complexfloating", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_5numpy_complexfloating) __PYX_ERR(1, 827, __pyx_L1_error)
19730
- __pyx_ptype_5numpy_flexible = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "flexible", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_5numpy_flexible) __PYX_ERR(1, 829, __pyx_L1_error)
19731
- __pyx_ptype_5numpy_character = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "character", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_7); if (!__pyx_ptype_5numpy_character) __PYX_ERR(1, 831, __pyx_L1_error)
19732
- __pyx_ptype_5numpy_ufunc = __Pyx_ImportType_3_0_7(__pyx_t_1, "numpy", "ufunc", sizeof(PyUFuncObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_7(PyUFuncObject),__Pyx_ImportType_CheckSize_Ignore_3_0_7); if (!__pyx_ptype_5numpy_ufunc) __PYX_ERR(1, 869, __pyx_L1_error)
19741
+ __pyx_ptype_5numpy_dtype = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "dtype", sizeof(PyArray_Descr), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArray_Descr),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_dtype) __PYX_ERR(1, 203, __pyx_L1_error)
19742
+ __pyx_ptype_5numpy_flatiter = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "flatiter", sizeof(PyArrayIterObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArrayIterObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_flatiter) __PYX_ERR(1, 226, __pyx_L1_error)
19743
+ __pyx_ptype_5numpy_broadcast = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "broadcast", sizeof(PyArrayMultiIterObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArrayMultiIterObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_broadcast) __PYX_ERR(1, 230, __pyx_L1_error)
19744
+ __pyx_ptype_5numpy_ndarray = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "ndarray", sizeof(PyArrayObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyArrayObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_ndarray) __PYX_ERR(1, 239, __pyx_L1_error)
19745
+ __pyx_ptype_5numpy_generic = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "generic", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_generic) __PYX_ERR(1, 813, __pyx_L1_error)
19746
+ __pyx_ptype_5numpy_number = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "number", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_number) __PYX_ERR(1, 815, __pyx_L1_error)
19747
+ __pyx_ptype_5numpy_integer = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "integer", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_integer) __PYX_ERR(1, 817, __pyx_L1_error)
19748
+ __pyx_ptype_5numpy_signedinteger = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "signedinteger", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_signedinteger) __PYX_ERR(1, 819, __pyx_L1_error)
19749
+ __pyx_ptype_5numpy_unsignedinteger = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "unsignedinteger", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_unsignedinteger) __PYX_ERR(1, 821, __pyx_L1_error)
19750
+ __pyx_ptype_5numpy_inexact = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "inexact", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_inexact) __PYX_ERR(1, 823, __pyx_L1_error)
19751
+ __pyx_ptype_5numpy_floating = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "floating", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_floating) __PYX_ERR(1, 825, __pyx_L1_error)
19752
+ __pyx_ptype_5numpy_complexfloating = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "complexfloating", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_complexfloating) __PYX_ERR(1, 827, __pyx_L1_error)
19753
+ __pyx_ptype_5numpy_flexible = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "flexible", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_flexible) __PYX_ERR(1, 829, __pyx_L1_error)
19754
+ __pyx_ptype_5numpy_character = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "character", sizeof(PyObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyObject),__Pyx_ImportType_CheckSize_Warn_3_0_10); if (!__pyx_ptype_5numpy_character) __PYX_ERR(1, 831, __pyx_L1_error)
19755
+ __pyx_ptype_5numpy_ufunc = __Pyx_ImportType_3_0_10(__pyx_t_1, "numpy", "ufunc", sizeof(PyUFuncObject), __PYX_GET_STRUCT_ALIGNMENT_3_0_10(PyUFuncObject),__Pyx_ImportType_CheckSize_Ignore_3_0_10); if (!__pyx_ptype_5numpy_ufunc) __PYX_ERR(1, 869, __pyx_L1_error)
19733
19756
  __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
19734
19757
  __Pyx_RefNannyFinishContext();
19735
19758
  return 0;
@@ -21430,11 +21453,11 @@ static CYTHON_INLINE PyObject * __Pyx_GetKwValue_FASTCALL(PyObject *kwnames, PyO
21430
21453
  {
21431
21454
  int eq = __Pyx_PyUnicode_Equals(s, PyTuple_GET_ITEM(kwnames, i), Py_EQ);
21432
21455
  if (unlikely(eq != 0)) {
21433
- if (unlikely(eq < 0)) return NULL; // error
21456
+ if (unlikely(eq < 0)) return NULL;
21434
21457
  return kwvalues[i];
21435
21458
  }
21436
21459
  }
21437
- return NULL; // not found (no exception set)
21460
+ return NULL;
21438
21461
  }
21439
21462
  #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030d0000
21440
21463
  CYTHON_UNUSED static PyObject *__Pyx_KwargsAsDict_FASTCALL(PyObject *kwnames, PyObject *const *kwvalues) {
@@ -21547,7 +21570,7 @@ static int __Pyx_ParseOptionalKeywords(
21547
21570
  if (*name) {
21548
21571
  values[name-argnames] = value;
21549
21572
  #if CYTHON_AVOID_BORROWED_REFS
21550
- Py_INCREF(value); // transfer ownership of value to values
21573
+ Py_INCREF(value);
21551
21574
  Py_DECREF(key);
21552
21575
  #endif
21553
21576
  key = NULL;
@@ -21566,7 +21589,7 @@ static int __Pyx_ParseOptionalKeywords(
21566
21589
  && _PyString_Eq(**name, key)) {
21567
21590
  values[name-argnames] = value;
21568
21591
  #if CYTHON_AVOID_BORROWED_REFS
21569
- value = NULL; // ownership transferred to values
21592
+ value = NULL;
21570
21593
  #endif
21571
21594
  break;
21572
21595
  }
@@ -21598,7 +21621,7 @@ static int __Pyx_ParseOptionalKeywords(
21598
21621
  if (cmp == 0) {
21599
21622
  values[name-argnames] = value;
21600
21623
  #if CYTHON_AVOID_BORROWED_REFS
21601
- value = NULL; // ownership transferred to values
21624
+ value = NULL;
21602
21625
  #endif
21603
21626
  break;
21604
21627
  }
@@ -22553,9 +22576,10 @@ static PyObject *__Pyx_PyObject_GetItem(PyObject *obj, PyObject *key) {
22553
22576
 
22554
22577
  /* UnpackUnboundCMethod */
22555
22578
  static PyObject *__Pyx_SelflessCall(PyObject *method, PyObject *args, PyObject *kwargs) {
22579
+ PyObject *result;
22556
22580
  PyObject *selfless_args = PyTuple_GetSlice(args, 1, PyTuple_Size(args));
22557
22581
  if (unlikely(!selfless_args)) return NULL;
22558
- PyObject *result = PyObject_Call(method, selfless_args, kwargs);
22582
+ result = PyObject_Call(method, selfless_args, kwargs);
22559
22583
  Py_DECREF(selfless_args);
22560
22584
  return result;
22561
22585
  }
@@ -22692,9 +22716,10 @@ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) {
22692
22716
 
22693
22717
  /* IterFinish */
22694
22718
  static CYTHON_INLINE int __Pyx_IterFinish(void) {
22719
+ PyObject* exc_type;
22695
22720
  __Pyx_PyThreadState_declare
22696
22721
  __Pyx_PyThreadState_assign
22697
- PyObject* exc_type = __Pyx_PyErr_CurrentExceptionType();
22722
+ exc_type = __Pyx_PyErr_CurrentExceptionType();
22698
22723
  if (unlikely(exc_type)) {
22699
22724
  if (unlikely(!__Pyx_PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration)))
22700
22725
  return -1;
@@ -23707,10 +23732,10 @@ __PYX_GOOD:
23707
23732
  #endif
23708
23733
 
23709
23734
  /* TypeImport */
23710
- #ifndef __PYX_HAVE_RT_ImportType_3_0_7
23711
- #define __PYX_HAVE_RT_ImportType_3_0_7
23712
- static PyTypeObject *__Pyx_ImportType_3_0_7(PyObject *module, const char *module_name, const char *class_name,
23713
- size_t size, size_t alignment, enum __Pyx_ImportType_CheckSize_3_0_7 check_size)
23735
+ #ifndef __PYX_HAVE_RT_ImportType_3_0_10
23736
+ #define __PYX_HAVE_RT_ImportType_3_0_10
23737
+ static PyTypeObject *__Pyx_ImportType_3_0_10(PyObject *module, const char *module_name, const char *class_name,
23738
+ size_t size, size_t alignment, enum __Pyx_ImportType_CheckSize_3_0_10 check_size)
23714
23739
  {
23715
23740
  PyObject *result = 0;
23716
23741
  char warning[200];
@@ -23764,7 +23789,7 @@ static PyTypeObject *__Pyx_ImportType_3_0_7(PyObject *module, const char *module
23764
23789
  module_name, class_name, size, basicsize+itemsize);
23765
23790
  goto bad;
23766
23791
  }
23767
- if (check_size == __Pyx_ImportType_CheckSize_Error_3_0_7 &&
23792
+ if (check_size == __Pyx_ImportType_CheckSize_Error_3_0_10 &&
23768
23793
  ((size_t)basicsize > size || (size_t)(basicsize + itemsize) < size)) {
23769
23794
  PyErr_Format(PyExc_ValueError,
23770
23795
  "%.200s.%.200s size changed, may indicate binary incompatibility. "
@@ -23772,7 +23797,7 @@ static PyTypeObject *__Pyx_ImportType_3_0_7(PyObject *module, const char *module
23772
23797
  module_name, class_name, size, basicsize, basicsize+itemsize);
23773
23798
  goto bad;
23774
23799
  }
23775
- else if (check_size == __Pyx_ImportType_CheckSize_Warn_3_0_7 && (size_t)basicsize > size) {
23800
+ else if (check_size == __Pyx_ImportType_CheckSize_Warn_3_0_10 && (size_t)basicsize > size) {
23776
23801
  PyOS_snprintf(warning, sizeof(warning),
23777
23802
  "%s.%s size changed, may indicate binary incompatibility. "
23778
23803
  "Expected %zd from C header, got %zd from PyObject",
@@ -25119,7 +25144,7 @@ static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS(PyObject *func,
25119
25144
  default:
25120
25145
  return NULL;
25121
25146
  }
25122
- return ((_PyCFunctionFastWithKeywords)(void(*)(void))def->ml_meth)(self, args, nargs, kwnames);
25147
+ return ((__Pyx_PyCFunctionFastWithKeywords)(void(*)(void))def->ml_meth)(self, args, nargs, kwnames);
25123
25148
  }
25124
25149
  static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS_METHOD(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames)
25125
25150
  {
@@ -25832,7 +25857,7 @@ static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
25832
25857
  #else
25833
25858
  py_code = PyCode_NewEmpty(filename, funcname, py_line);
25834
25859
  #endif
25835
- Py_XDECREF(py_funcname); // XDECREF since it's only set on Py3 if cline
25860
+ Py_XDECREF(py_funcname);
25836
25861
  return py_code;
25837
25862
  bad:
25838
25863
  Py_XDECREF(py_funcname);