biopipen 0.7.0__py3-none-any.whl → 0.8.0__py3-none-any.whl

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Files changed (65) hide show
  1. biopipen/__init__.py +1 -1
  2. biopipen/core/config.py +0 -5
  3. biopipen/core/config.toml +4 -4
  4. biopipen/core/defaults.py +3 -3
  5. biopipen/core/filters.py +1 -0
  6. biopipen/core/proc.py +1 -3
  7. biopipen/core/testing.py +1 -2
  8. biopipen/ns/bam.py +10 -14
  9. biopipen/ns/bcftools.py +37 -7
  10. biopipen/ns/bed.py +9 -16
  11. biopipen/ns/cnv.py +8 -11
  12. biopipen/ns/cnvkit.py +32 -59
  13. biopipen/ns/cnvkit_pipeline.py +266 -310
  14. biopipen/ns/csv.py +0 -2
  15. biopipen/ns/gene.py +0 -1
  16. biopipen/ns/gsea.py +4 -10
  17. biopipen/ns/misc.py +0 -5
  18. biopipen/ns/plot.py +2 -4
  19. biopipen/ns/rnaseq.py +0 -1
  20. biopipen/ns/scrna.py +78 -120
  21. biopipen/ns/scrna_metabolic_landscape.py +306 -348
  22. biopipen/ns/tcgamaf.py +52 -0
  23. biopipen/ns/tcr.py +5 -15
  24. biopipen/ns/vcf.py +52 -34
  25. biopipen/ns/web.py +8 -19
  26. biopipen/reports/bam/CNAClinic.svelte +1 -1
  27. biopipen/reports/bam/CNVpytor.svelte +2 -2
  28. biopipen/reports/bam/ControlFREEC.svelte +1 -1
  29. biopipen/reports/cnv/AneuploidyScore.svelte +2 -2
  30. biopipen/reports/cnv/AneuploidyScoreSummary.svelte +1 -1
  31. biopipen/reports/cnvkit/CNVkitDiagram.svelte +1 -1
  32. biopipen/reports/cnvkit/CNVkitHeatmap.svelte +1 -1
  33. biopipen/reports/cnvkit/CNVkitScatter.svelte +1 -1
  34. biopipen/reports/gsea/FGSEA.svelte +1 -1
  35. biopipen/reports/gsea/GSEA.svelte +2 -2
  36. biopipen/reports/scrna/CellsDistribution.svelte +1 -1
  37. biopipen/reports/scrna/DimPlots.svelte +1 -1
  38. biopipen/reports/scrna/GeneExpressionInvistigation.svelte +1 -1
  39. biopipen/reports/scrna/MarkersFinder.svelte +42 -39
  40. biopipen/reports/scrna/ScFGSEA.svelte +3 -3
  41. biopipen/reports/scrna/SeuratClusterStats.svelte +3 -3
  42. biopipen/reports/scrna/SeuratPreparing.svelte +2 -2
  43. biopipen/reports/scrna_metabolic_landscape/MetabolicFeaturesIntraSubsets.svelte +2 -2
  44. biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayActivity.svelte +1 -1
  45. biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayHeterogeneity.svelte +1 -1
  46. biopipen/reports/tcr/CloneResidency.svelte +4 -4
  47. biopipen/reports/tcr/Immunarch.svelte +2 -2
  48. biopipen/reports/tcr/SampleDiversity.svelte +2 -2
  49. biopipen/reports/tcr/TCRClusteringStats.svelte +3 -3
  50. biopipen/reports/tcr/VJUsage.svelte +1 -1
  51. biopipen/reports/utils/gsea.liq +1 -1
  52. biopipen/reports/utils/misc.liq +1 -1
  53. biopipen/reports/vcf/TruvariBenchSummary.svelte +1 -1
  54. biopipen/reports/vcf/TruvariConsistency.svelte +3 -3
  55. biopipen/scripts/bcftools/BcftoolsSort.py +19 -0
  56. biopipen/scripts/scrna/MarkersFinder.R +73 -35
  57. biopipen/scripts/tcgamaf/Maf2Vcf.py +22 -0
  58. biopipen/scripts/tcgamaf/MafAddChr.py +14 -0
  59. biopipen/scripts/tcgamaf/maf2vcf.pl +427 -0
  60. biopipen/scripts/vcf/VcfAnno.py +26 -0
  61. biopipen/scripts/vcf/VcfFix_utils.py +3 -2
  62. {biopipen-0.7.0.dist-info → biopipen-0.8.0.dist-info}/METADATA +7 -8
  63. {biopipen-0.7.0.dist-info → biopipen-0.8.0.dist-info}/RECORD +65 -59
  64. {biopipen-0.7.0.dist-info → biopipen-0.8.0.dist-info}/WHEEL +1 -1
  65. {biopipen-0.7.0.dist-info → biopipen-0.8.0.dist-info}/entry_points.txt +2 -1
@@ -1,64 +1,66 @@
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- biopipen/__init__.py,sha256=8FxDLgghb8-f9GPC9lakRoKo6uKqG7vAkgiOOjS8t5k,23
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+ biopipen/__init__.py,sha256=kTBVFU2JV0uZaCX5p4I2Yj-xBdwAAjn3KIWXhA0k2Fw,23
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  biopipen/core/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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- biopipen/core/config.py,sha256=z1b7ZHkqUzlFIvoL77NkZ8AbpUTPrP-oW-uA2Ijmi-o,1252
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- biopipen/core/config.toml,sha256=1AQvArZ8oTq83OTeq2XsDKnIwuCHh9n-_tdqctjLwxE,1613
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- biopipen/core/defaults.py,sha256=LrrvGaQ0DKrXSCnsf3dk2Jps_lUaF2_akcnwqHgfbpQ,350
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- biopipen/core/filters.py,sha256=KQ4yV9Y9hdHJKiXkHxFl2h1q9V7bexxIZhgllMdJSUw,2325
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- biopipen/core/proc.py,sha256=2idZID_lVZjd-va9s3rr7dnQia38r5N1T0ycFoTfOoI,521
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- biopipen/core/testing.py,sha256=Su00bdQc7JNAS61i81KlnaijpvArPyzwOQJMaASfxdU,1604
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+ biopipen/core/config.py,sha256=edK5xnDhM8j27srDzsxubi934NMrglLoKrdcC8qsEPk,1069
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+ biopipen/core/config.toml,sha256=sEpvNX31ZL0XF2OpJ5tk_YJzLTwjkTf0I8-TvUfXQ3o,1598
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+ biopipen/core/defaults.py,sha256=yPeehPLk_OYCf71IgRVCWuQRxLAMixDF81Ium0HtPKI,344
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+ biopipen/core/filters.py,sha256=dJuCIrWKt7ZaHD9FPyZr65f2y9kfS2k341ayOdRefy0,2360
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+ biopipen/core/proc.py,sha256=enxk0Zq_UX-C62LjRk0AhS2e8B-NjvKt2rrqdTGHbe8,498
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+ biopipen/core/testing.py,sha256=7dC_knI-DzRtHoyEisQ73cGTNQb_kvVdMb3rDgQ4Qng,1586
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  biopipen/ns/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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- biopipen/ns/bam.py,sha256=VBcIHzrtPepFsAD3jiSekGsFXdJW_IY0cn2l4G_-QhY,6511
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- biopipen/ns/bcftools.py,sha256=mo7hYW5ANiUG842aFPGzBkjiJI20HvGxjSrvYDpQr_8,2562
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- biopipen/ns/bed.py,sha256=MK8hN3zBcflIVguXXHQGjFEhp8yR0uF4ArISNmxwEBk,5298
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- biopipen/ns/cnv.py,sha256=gUfkDHVTyiu-Y1U2BU9U1MI70ODDBQoaizX9XQCIS68,2944
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- biopipen/ns/cnvkit.py,sha256=pUzQ79XYMh68OQJp5W2eKvyobOU080Tc71OCXYJf9vc,28631
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- biopipen/ns/cnvkit_pipeline.py,sha256=LOdJGvbCTPmNWSHGsu3AayD7bjOGzGY6Tjk_Gvb89Ps,28248
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- biopipen/ns/csv.py,sha256=7EKaKZRR_bljgBKHi2W5kTQ00C7w1weQj5yugKQGCZA,486
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- biopipen/ns/gene.py,sha256=uXVd0Hl0CVIbIB5ke3l5KIPizUDBvFPLnJW_TxWVP9E,2229
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- biopipen/ns/gsea.py,sha256=59XYke7d3dTRubrKnz0QCUpfh7ZgD0DRtIap00-OzNc,7461
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- biopipen/ns/misc.py,sha256=bTN49nbGdsG7n9haORMtVPq8gNMcbZVrOWsFQEGXIrA,3020
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- biopipen/ns/plot.py,sha256=MilgDR2jguaiy52KvRk25doLHWDpK8eAblf7nlfbQO4,4044
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- biopipen/ns/rnaseq.py,sha256=EdEUANf-hWnheUhHfJoI-HjBN82Geks64KBptgz_jqg,566
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- biopipen/ns/scrna.py,sha256=IckCtuS-QviPpCXkS_MHjqPsjFffkEbsWeWqK7dRkmk,29314
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- biopipen/ns/scrna_metabolic_landscape.py,sha256=D7eZT1TTIYkMbwWPpp_l6EbUZdPEB8PBHmYd_vbX364,16231
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- biopipen/ns/tcr.py,sha256=5JYjUZQccVlwUAELXem_iYY5K8z21fVNNOpOnGPmCU4,23112
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- biopipen/ns/vcf.py,sha256=VxU0GbzLuLMs0y6ZTkkGj2pJyi7Nj8TzYPigFn66WBY,14450
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- biopipen/ns/web.py,sha256=-Fr0522fOHyhCk9IsHDGp6QCWL8bQwGulrXM-ZQrujY,2371
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- biopipen/reports/bam/CNAClinic.svelte,sha256=wClI4eT7nDaKTkNlG0BRbIbSOfp5aFP2heY7qC8AqQs,210
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- biopipen/reports/bam/CNVpytor.svelte,sha256=SgtU4IA3nYovR6Hh4R_Enp4oo-N5YwGVPExk-ZWZA6I,1381
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- biopipen/reports/bam/ControlFREEC.svelte,sha256=jIBYIa4YgUyUwXSs7iBBlPCk2yZk0Xi2MS4Kh1Mlcbw,834
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- biopipen/reports/cnv/AneuploidyScore.svelte,sha256=OkG918SSnLVHQs_pcY1qtnw2ZMNFlSVuqZ_IYSEIK8E,1037
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- biopipen/reports/cnv/AneuploidyScoreSummary.svelte,sha256=k4g-wxD6WMzKu1eiaijRK3-0o3KiGEmf_1nMe_HqeOc,1127
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- biopipen/reports/cnvkit/CNVkitDiagram.svelte,sha256=pWvtmu_eZ9kqBAtIk96w68a29Q142ab461562TsiOuU,464
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- biopipen/reports/cnvkit/CNVkitHeatmap.svelte,sha256=5WD4eQ7kuMyI6-yPIFIL_bqgITneKb2cG791WBDB-lw,516
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- biopipen/reports/cnvkit/CNVkitScatter.svelte,sha256=pWvtmu_eZ9kqBAtIk96w68a29Q142ab461562TsiOuU,464
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- biopipen/reports/gsea/FGSEA.svelte,sha256=MMtV4acDtcpkmBXBT3Awe4zsecSE9DQZPF-VxRtzyIM,402
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- biopipen/reports/gsea/GSEA.svelte,sha256=vJ1zrEFt1sNjWypIvzEAtnx5F8HCXQp2DyhjWI4WcKE,434
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- biopipen/reports/scrna/CellsDistribution.svelte,sha256=EPtB7z6W6vL21TUzzhn_wMKGmKlvKvxz9xch66tUL8U,579
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- biopipen/reports/scrna/DimPlots.svelte,sha256=fmaPHRyA9fyy-n54HNMq8dRc87O0rsyMswgCbeFRP5E,476
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- biopipen/reports/scrna/GeneExpressionInvistigation.svelte,sha256=yPkzmfOk-k-_eAHtgBhN9KzDbSZRSQJhPMUJ1NNID7I,790
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- biopipen/reports/scrna/MarkersFinder.svelte,sha256=8WDkYrJFSHryYzPfTaFkuqysAnqNTVqJYHD0tGWDHC4,1560
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- biopipen/reports/scrna/ScFGSEA.svelte,sha256=mQxfiamHDr3G73KlJasY9Y6m3fb2AiJDm-GGTJ_b4jc,1089
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- biopipen/reports/scrna/SeuratClusterStats.svelte,sha256=2PXCXXAq1zH8Sbvar83FC635pS8zIDVhY0P-wRlci00,5014
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- biopipen/reports/scrna/SeuratPreparing.svelte,sha256=AC9O1XDTp6qvPHH4Zy4xxs5j_CEHuY3Iw-E6NPvL4iE,1198
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+ biopipen/ns/bam.py,sha256=fqxcxeyuwMMc2yOII7ql6YrlD0gIAtxFwbn1fjuWi_o,6484
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+ biopipen/ns/bcftools.py,sha256=puCDfIL-1z6cz2y1Rlz-ESNIr8xJgeIjEQ440qicCvM,3467
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+ biopipen/ns/bed.py,sha256=h3lG28f_1MgbvPRBTtzKeG0iNhFkhSj4sre_NtgTwpg,5231
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+ biopipen/ns/cnv.py,sha256=j-QB3zCcCQkadKzBA-wP2oPOndM-Yigiq85U7-PXGAg,2901
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+ biopipen/ns/cnvkit.py,sha256=gLY9kFjmFNI4nTk4SLzkvRAL27msg7nANvZIMeVL9wM,28348
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+ biopipen/ns/cnvkit_pipeline.py,sha256=TeU1KjnSd7bswtPHFzT2_4VmjEZOmrqLuZMpnfgCv10,26835
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+ biopipen/ns/csv.py,sha256=x6J7WePX_hKSTxS1Ou4_o_oJJZaGN5a2E0Qve8R1QJc,484
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+ biopipen/ns/gene.py,sha256=Q5FzRByfnRITXRNRZR65ApG09FRyiihRC3TcIXxufzE,2228
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+ biopipen/ns/gsea.py,sha256=rM_Klmta2C4IxIzJi4T_SjQSBHzRNaoQELWRWH-m-QM,7423
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+ biopipen/ns/misc.py,sha256=GPrqizuVFttLGDsSGYSkd-F03ZZ4amu3qHVe94sQLmM,3015
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+ biopipen/ns/plot.py,sha256=AoInrMSe7b1Pjorgy4f1LMkaTwDmumkTzJDI4YyRbgs,4026
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+ biopipen/ns/rnaseq.py,sha256=l4vFeRasGhkexopGTM_VfSyIFewOxg-9L5niFzhWUNA,565
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+ biopipen/ns/scrna.py,sha256=jW4ZQm7jiA4zNVXS2JPsOBBwQkhGLnT2JpxA3Py_vyg,28935
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+ biopipen/ns/scrna_metabolic_landscape.py,sha256=A-YSrlezuoA6FUPOqMaA4VrGOLDa_FOUyh1hjEmvgQY,15622
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+ biopipen/ns/tcgamaf.py,sha256=AFbUJIxiMSvsVY3RcHgjRFuMnNh2DG3Mr5slLNEyz6o,1455
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+ biopipen/ns/vcf.py,sha256=cdkKroii0_nl_bSP2cnO09qESUAhHqu6btOiTSKS79Y,15314
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+ biopipen/ns/web.py,sha256=3zucrDo-IVsSnIvlw-deoScuxqWa6OMTm8Vo-R4E44Q,2224
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+ biopipen/reports/bam/CNAClinic.svelte,sha256=UYrh5vok4BgQbv5b1iohpoJKbBXQCAWx4RyOI-2m7og,212
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+ biopipen/reports/bam/CNVpytor.svelte,sha256=afJSkCHGYDKsxj_mv2BqIOadmgEeONVkR9uGmRR15dM,1363
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+ biopipen/reports/bam/ControlFREEC.svelte,sha256=3XKUKEaKWmOsYrHU90w4so5Fypr8YYC1MlMyJ2gMtFM,836
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+ biopipen/reports/cnv/AneuploidyScore.svelte,sha256=iaLBRO-VjPmYEOhLqA7lcTlGw15-LCJbsqsZWrmqziE,1019
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+ biopipen/reports/cnv/AneuploidyScoreSummary.svelte,sha256=sBYqRLLg4UpLuTFmv8nWn9BbnJL4muNjW0mi574Ym5M,1129
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+ biopipen/reports/cnvkit/CNVkitDiagram.svelte,sha256=SQU0ldaUtKXFYyPykxqaUofHfbuE1rNEzAUfJxZ7yz4,466
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+ biopipen/reports/cnvkit/CNVkitHeatmap.svelte,sha256=tXPejQCdTnCH9DS1TQmTEcnUJ54dAQKo_I8CJvDrUkI,518
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+ biopipen/reports/cnvkit/CNVkitScatter.svelte,sha256=SQU0ldaUtKXFYyPykxqaUofHfbuE1rNEzAUfJxZ7yz4,466
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+ biopipen/reports/scrna/CellsDistribution.svelte,sha256=Q5v1V50EIAO7HMTm_uKQM367TU7d871UMxRHNUNQSys,581
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+ biopipen/reports/scrna/DimPlots.svelte,sha256=sDSv4bLaEaTbgDJFuiogkVplU9PbZD3BcQKKykukgR8,478
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+ biopipen/reports/scrna/GeneExpressionInvistigation.svelte,sha256=GavmYimO4EDdAaR8TZBWmQlRXLi4EC8LZpFIvJkockE,792
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+ biopipen/reports/scrna/MarkersFinder.svelte,sha256=6-RX-qIDng0k-Dcl1X2dLUunyQjbRAQePYCE7IYajRE,1801
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+ biopipen/reports/scrna/ScFGSEA.svelte,sha256=UXhUSGXHrzkUzFkvc9-SR5R1SlHxutgA3r7gFtvj2Xg,1040
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+ biopipen/reports/scrna/SeuratClusterStats.svelte,sha256=aztYcWy4BWAXg00aQ0-J29ybM1A8yW96bpXAr9OclSI,4970
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+ biopipen/reports/scrna/SeuratPreparing.svelte,sha256=BlxtoUfFgzG-p_E4DJR_8u5f7oFdL3cIQrck2rjqT5c,1180
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  biopipen/reports/scrna_metabolic_landscape/MetabolicFeatures.svelte,sha256=1AHjiInGLev1_gfis5oVegYXgKLzDXA9qMwEgPqRDfI,880
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- biopipen/reports/scrna_metabolic_landscape/MetabolicFeaturesIntraSubsets.svelte,sha256=MZ4ML07EhGyHKT8bOHrQr90g48y9tR05gPtgkM_XsP8,1016
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- biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayActivity.svelte,sha256=p2DU_vcPlwdrqn43bWMuasKjCKMdp-JGCHrcTuWbwao,2540
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- biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayHeterogeneity.svelte,sha256=bwd1TjkrsNzw4DKvrJ3Lv_RfQlzYT4UQIg306YuPHbQ,634
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- biopipen/reports/tcr/CloneResidency.svelte,sha256=1HxVbj1mPxuIhEQN0vIyeG_wrq8KzrKSyGe2tVPE18M,2996
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- biopipen/reports/tcr/Immunarch.svelte,sha256=2gjhBl3wpBP8fBEV_F1xNv_bml81f5IxeBrTXd10RQw,7871
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- biopipen/reports/tcr/SampleDiversity.svelte,sha256=ueK9_Iz1HjTxu75ipp7orywxwKMwmex8elQ9ejTvGkc,5541
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- biopipen/reports/tcr/TCRClusteringStats.svelte,sha256=wTIM4g7mY94wctiGelp6dApS1weQxVT9E2fRa6Nzy0c,3800
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- biopipen/reports/tcr/VJUsage.svelte,sha256=PuXD-NvsUsSjvicoRyh8_qZJZnNS4vCg4WruYiwOCmY,423
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- biopipen/reports/utils/misc.liq,sha256=NypvCuuJIa3GeBNJEAlCBn8e3-orIr9iTfw1ejL3ots,1661
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- biopipen/reports/vcf/TruvariBenchSummary.svelte,sha256=UNFm8o-3nJStyTm39gLowmXy38huEE_TPoif8qrXrtQ,574
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- biopipen/reports/vcf/TruvariConsistency.svelte,sha256=UrZTauNXsThl3nebL842700SHlQ4BK1R7nq0VHLukYg,689
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+ biopipen/reports/scrna_metabolic_landscape/MetabolicFeaturesIntraSubsets.svelte,sha256=RqlrWU_e7O98e23HfUh5-HPElniuOXQ1N_SorHgFPV8,992
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+ biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayActivity.svelte,sha256=LKDdNf0A5kLK2VJ7o1iMFNS5U1Zd1h1AodwyKwyTvlg,2542
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+ biopipen/reports/scrna_metabolic_landscape/MetabolicPathwayHeterogeneity.svelte,sha256=Kl7FeGG-vfgs8CcLnazuCb692-NP5rHmFekBvRRtyLo,636
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+ biopipen/reports/tcr/CloneResidency.svelte,sha256=ap6BCAUAm33bV6VieTh59sZwNYdE8BsTx25vU1sRAgw,2928
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+ biopipen/reports/tcr/Immunarch.svelte,sha256=GjuT6genEO9f6L8tbXQKP3sKa_O90PASfMX1Ig7o74U,7853
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+ biopipen/reports/tcr/SampleDiversity.svelte,sha256=6qnzpQbLvUtN1wV77nmS6PpzBuIe49sS-qRMkae0IZM,5523
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+ biopipen/reports/tcr/VJUsage.svelte,sha256=gTOfOFQ5cH9nbfABauyGfOg7B9KiHHgTYZiLtaM1EGM,425
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+ biopipen/reports/utils/gsea.liq,sha256=XAaNbX04aEg6ylgAU60PyJM2lHxJ-cisVkYYfT__cqc,2626
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+ biopipen/reports/utils/misc.liq,sha256=tce8pgg5eeFy51_iX0mT34M5Ykr5bi9kQs6q1oQBJQo,1652
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+ biopipen/reports/vcf/TruvariBenchSummary.svelte,sha256=l7RXKWzMRjkAwWhdCNpx0hz2sO1nYFJI4xHZdt2haSw,576
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+ biopipen/reports/vcf/TruvariConsistency.svelte,sha256=VQwNRHMxxXYlYxQpZ0-KrShkElthBP__yWNc1YFOU54,646
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+ biopipen/scripts/bcftools/BcftoolsSort.py,sha256=5YYTCsNkE7vqnK9dH9HeBKZUhpc5uxUlyyfGJJmtXoc,549
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@@ -97,7 +99,7 @@ biopipen/scripts/scrna/ExprImpute-rmagic.R,sha256=CfiCL-agHg2p-rmW7IcySlqblT7Ik2
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- biopipen/scripts/scrna/MarkersFinder.R,sha256=X7P_S-L_NMusTZtbjnsjZS8S6ZF66f1Mz5IVja_zLi8,3134
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+ biopipen/scripts/scrna/MarkersFinder.R,sha256=mEhdih69dRxjCqTQ2i75fJ1ZpPzI4i7mcQcgM-e86dI,4679
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@@ -115,6 +117,9 @@ biopipen/scripts/scrna_metabolic_landscape/MetabolicFeatures.R,sha256=THm07CLSq8
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+ biopipen/scripts/tcgamaf/Maf2Vcf.py,sha256=MGc-viCLvfmbLbW7Kc4pN13FdWXIbCkpVc1bSQwb_ek,672
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+ biopipen/scripts/tcgamaf/MafAddChr.py,sha256=V10HMisl12O3ZfXuRmFNdy5p-3mr43WCvy0GHxSpwfA,494
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+ biopipen/scripts/tcgamaf/maf2vcf.pl,sha256=hJKcH-NbgWK6fmK7f3qex7ozJJl-PqCNPXqpwfcHwJg,22707
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@@ -132,10 +137,11 @@ biopipen/scripts/vcf/TruvariBench.sh,sha256=80yLQ73OzSgsJ4ltzgpcWxYvvX1hFnCG8YSB
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+ biopipen/scripts/vcf/VcfAnno.py,sha256=2Ry3lFTJN9ohDat4O6ZOtTcBLBgS6jvthx13SFhL7RY,734
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+ biopipen/scripts/vcf/VcfFix_utils.py,sha256=Ev_rvgLY9GF-aNntWbjXbl6eVlubw5uyHUD-g1c6Rno,2294
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@@ -151,7 +157,7 @@ biopipen/utils/plot.R,sha256=pzl37PomNeUZPxohHZ2w93j3Fc4T0Qrc62FF-9MTKdw,4417
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- biopipen-0.7.0.dist-info/METADATA,sha256=2deRfE6BqVkYyenBh5gCQFX9iHplJ-aGKfQ_mJydssE,896
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- biopipen-0.7.0.dist-info/entry_points.txt,sha256=-GRmvXuP0qXBC9WjOeSUh8B1O_SQOmzFPxOgQUzPsxM,439
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- biopipen-0.7.0.dist-info/WHEEL,sha256=vVCvjcmxuUltf8cYhJ0sJMRDLr1XsPuxEId8YDzbyCY,88
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- biopipen-0.7.0.dist-info/RECORD,,
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+ biopipen-0.8.0.dist-info/METADATA,sha256=uuLnWt_OyAoDPZvIXwKAfmw1n1OWQjAFKWjYZjpMCoA,839
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+ biopipen-0.8.0.dist-info/WHEEL,sha256=kLuE8m1WYU0Ig0_YEGrXyTtiJvKPpLpDEiChiNyei5Y,88
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+ biopipen-0.8.0.dist-info/entry_points.txt,sha256=32HZbG--GdGnCHiTeBUiQ0_NkZGshITTOPE1a83-jQc,487
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+ biopipen-0.8.0.dist-info/RECORD,,
@@ -1,4 +1,4 @@
1
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  Wheel-Version: 1.0
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- Generator: poetry-core 1.4.0
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+ Generator: poetry-core 1.5.1
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  Root-Is-Purelib: true
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  Tag: py3-none-any
@@ -12,7 +12,8 @@ misc=biopipen.ns.misc
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- scrna_metabolic=biopipen.ns.scrna_metabolic
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+ scrna_metabolic_landscape=biopipen.ns.scrna_metabolic_landscape
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+ tcgamaf=biopipen.ns.tcgamaf
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