biofiles 0.0.13__py3-none-any.whl → 0.0.14__py3-none-any.whl

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Files changed (6) hide show
  1. biofiles/repeatmasker.py +5 -1
  2. {biofiles-0.0.13.dist-info → biofiles-0.0.14.dist-info}/METADATA +1 -1
  3. {biofiles-0.0.13.dist-info → biofiles-0.0.14.dist-info}/RECORD +6 -6
  4. {biofiles-0.0.13.dist-info → biofiles-0.0.14.dist-info}/WHEEL +0 -0
  5. {biofiles-0.0.13.dist-info → biofiles-0.0.14.dist-info}/licenses/LICENSE +0 -0
  6. {biofiles-0.0.13.dist-info → biofiles-0.0.14.dist-info}/top_level.txt +0 -0
biofiles/repeatmasker.py CHANGED
@@ -11,11 +11,15 @@ __all__ = ["RepeatMaskerReader"]
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  class RepeatMaskerReader(Reader):
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  def __iter__(self) -> Iterator[Repeat]:
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+ has_passed_header = False
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  for line in self._input:
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- parts = line.split("\t")
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+ parts = line.split()
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  if not (14 <= len(parts) <= 15):
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  # Probably some metainfo. No way to tell.
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  continue
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+ if not has_passed_header and ("SW" in parts or "score" in parts):
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+ continue
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+ has_passed_header = True
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  (
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  sw_score_str,
{biofiles-0.0.13.dist-info → biofiles-0.0.14.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: biofiles
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- Version: 0.0.13
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+ Version: 0.0.14
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  Summary: Pure-Python, zero-dependency collection of bioinformatics-related file readers and writers
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  Author-email: Tigran Saluev <tigran@saluev.com>
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  Maintainer-email: Tigran Saluev <tigran@saluev.com>
{biofiles-0.0.13.dist-info → biofiles-0.0.14.dist-info}/RECORD RENAMED
@@ -5,7 +5,7 @@ biofiles/fai.py,sha256=gG2oDmaU7PIIYYBc8LiudaeKdo-6WIdwsMDIM7qi098,678
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  biofiles/fasta.py,sha256=ctIt5I_fcZx-xQN921zpmlZS7e9_ICf-3_i6mTs5qbs,2135
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  biofiles/gff.py,sha256=b3apOmJNoiy_qQHtyUSnNh0s999B6gyAODyjI7fN15g,6246
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  biofiles/gtf.py,sha256=jDQmQ3LB1iNxCCYExScJ6ivQM49TrRO7IPDfUe8VK3Y,2611
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- biofiles/repeatmasker.py,sha256=txOYdw15ru88pUczsk0pDFzgGpplLu23CB8Ppz-MczY,3119
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+ biofiles/repeatmasker.py,sha256=7KObXELCHQ6oBkO8yK6Znrs6MX8sfVuxNSmOMe0Ogfk,3289
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  biofiles/dialects/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  biofiles/dialects/havana_ensembl.py,sha256=7I97U3UUiFoSOTOR0_orw5eBjCit5FyViosRZqb6AcQ,3379
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  biofiles/types/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -18,8 +18,8 @@ biofiles/utility/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,
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  biofiles/utility/cli.py,sha256=bkUzmT5R4qdJ0YtA4LNU5JYpimD1HmZlHtoSaKzDsUc,4032
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  biofiles/utility/feature.py,sha256=O7KV3uI9JtUJWZNrOZ3XfVapwmEmRHm9li4XlpqtlMs,8865
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  biofiles/utility/feature_v2.py,sha256=ByhUCkG45d_wra8W5vz-8CMnNYMCHzNglFMMEhMKoWk,5440
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- biofiles-0.0.13.dist-info/licenses/LICENSE,sha256=CbR8ssdFyViKj25JAlMjIt1_FbiZ1tAC5t-uwUbxqak,1070
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- biofiles-0.0.13.dist-info/METADATA,sha256=TFrFYIF1CoVvAChjeTtzOGE9T0ebobujopzD8QzZLQo,3056
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- biofiles-0.0.13.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- biofiles-0.0.13.dist-info/top_level.txt,sha256=laFaFv8hpkI4U-Pgs0yBaAJXN2_CJKl7jb-m3-tGfSc,9
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- biofiles-0.0.13.dist-info/RECORD,,
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+ biofiles-0.0.14.dist-info/licenses/LICENSE,sha256=CbR8ssdFyViKj25JAlMjIt1_FbiZ1tAC5t-uwUbxqak,1070
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+ biofiles-0.0.14.dist-info/METADATA,sha256=DaOVBrpMhK_bKgBEU1uTjjUu6QJS7Zfx8mV4gYL2MLM,3056
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+ biofiles-0.0.14.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ biofiles-0.0.14.dist-info/top_level.txt,sha256=laFaFv8hpkI4U-Pgs0yBaAJXN2_CJKl7jb-m3-tGfSc,9
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+ biofiles-0.0.14.dist-info/RECORD,,