bge-python-sdk 0.6.2__py3-none-any.whl → 0.7.0__py3-none-any.whl

{bge_python_sdk-0.6.2.dist-info → bge_python_sdk-0.7.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bge-python-sdk
-Version: 0.6.2
+Version: 0.7.0
 Summary: 可用于调用 BGE 开放平台的相关接口。
 Home-page: https://github.com/teambge/bge-python-sdk
 Author: leafcoder,xiangji1204
@@ -9,6 +9,7 @@ Maintainer: leafcoder
 Maintainer-email: leafcoder@gmail.com
 License: MIT
 Keywords: bge-python-sdk bge bgesdk sdk
+Platform: UNKNOWN
 Classifier: Development Status :: 5 - Production/Stable
 Classifier: Intended Audience :: Developers
 Classifier: License :: OSI Approved :: MIT License
@@ -23,12 +24,14 @@ Classifier: Programming Language :: Python :: 3.7
 Classifier: Programming Language :: Python :: 3.8
 Classifier: Programming Language :: Python :: 3.9
 Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
 Classifier: Topic :: Software Development :: Libraries
 Classifier: Topic :: Software Development :: Libraries :: Python Modules
 Classifier: Topic :: Utilities
 Requires-Python: >=3.6.3
 Description-Content-Type: text/markdown
-License-File: LICENSE
 Requires-Dist: aliyun-python-sdk-core
 Requires-Dist: six
 Requires-Dist: certifi
@@ -180,3 +183,5 @@ print(api.get_variants('E-B1243433', 'rs333'))
 
 * xiangji1204's [github](https://github.com/xiangji1204)
 * leafcoder(leafcoder@gmail.com)'s [github](https://github.com/leafcoder)
+
+

{bge_python_sdk-0.6.2.dist-info → bge_python_sdk-0.7.0.dist-info}/RECORD

@@ -1,13 +1,13 @@
 bgesdk/__init__.py,sha256=FgKWRqlkspNPC79IF6yLD6SEMST-gl55ZQXT_jOPUb4,124
 bgesdk/__main__.py,sha256=IDvh-O043qXjyp1CX0FH_tX2ss1FWZKbWqOGpu_wtSk,2196
-bgesdk/client.py,sha256=LFNUIeLd08Z9v-nEwhuCbM-MUhfchiXrMeDmPnu4C-Q,53424
+bgesdk/client.py,sha256=_un6dX6ULpnolVD6iFIX2Crt5U5Bhy9Dbwy_KW0qVYU,60812
 bgesdk/constants.py,sha256=bE60GPAHLg1UzacrOllPXGqUwhsVo5kjwJq9_ibB4Ng,636
 bgesdk/error.py,sha256=GVxBbz1REoypN3OqDzZXd0f-B0J_P1pBRapH1TnQucc,462
 bgesdk/fs.py,sha256=36wi3FEUHAirEFJpYEtjIN3wwDilPRFIEt45TjXUEVM,154
 bgesdk/http.py,sha256=SZoPm4kO99QCHQU1p2G5zicl34n3dpMMxfA1oYo7EGA,4503
-bgesdk/models.py,sha256=gRxJUue9nDvJAeIAsSCe3M-wzPHvnBNatkIn6DRXQ1M,3865
+bgesdk/models.py,sha256=pSCtft7CLLYKI4CTQP1j3x1wbguJDX23OUFxpjw5EUs,4566
 bgesdk/utils.py,sha256=i-s74kQlnlQk7QQi9wur6ack1gUwyS1Mw4F-L0w1cpw,884
-bgesdk/version.py,sha256=JcZliSJCv879QkXKmj7fJHcWtsHApyiQrLCvFqUDCHw,46
+bgesdk/version.py,sha256=v37Hxx1kbpEqtQ4RjPqxd8x3WvceaC9Z6-jl-k2d7KI,46
 bgesdk/management/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 bgesdk/management/command.py,sha256=TyssJaZ_pUQ7JitJkfh0PMK8y8GATobd5yL2O1vm_Nk,701
 bgesdk/management/constants.py,sha256=lPPix3TQ-OisDikIODK4-_1ebM5GiuITkJVFqWR8zYI,1508
@@ -16,26 +16,30 @@ bgesdk/management/validate.py,sha256=yPKIarj_MeeSvWWhVtQplw8yeCGDsBktmsMU_zYnaAQ
 bgesdk/management/commands/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 bgesdk/management/commands/config.py,sha256=FHjJcBs9UsFNUPGvr6YB0SycJf3uTBUecsOgjCXIMJo,7118
 bgesdk/management/commands/login.py,sha256=M71zjflQtRgJ9IZNEdU10b2XBjgcy3VcNP5G1TvxBto,3919
-bgesdk/management/commands/model.py,sha256=VFcIi2OuM1ZroKh2ncFdFL7ohNSaJ590ilhaXxoqNO4,67316
+bgesdk/management/commands/model.py,sha256=XvhZutCa-49ffNT3HuGI9ueTn4CCX68ZCnuTSNT3JtE,68976
 bgesdk/management/commands/model_doc.py,sha256=uDLpie3-KQ5rOVXIHGdttoxrE9ZWySwV2eLnFUnmRq8,13811
 bgesdk/management/commands/token.py,sha256=BqplYw-1ESBpxJOvs6kzcYqpcdqJGs35z5JR9jmMaiQ,2515
 bgesdk/management/commands/workon.py,sha256=WEC__3tlVy7ZXGZug-rwf5pd59UTTsh6xxoKefKTL3s,1183
 bgesdk/management/commands/api/__init__.py,sha256=nl_es-yj-q4Xo5sUny-i-gE26FVOYZNyX1zhUTvETS8,1975
 bgesdk/management/commands/api/commands/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-bgesdk/management/commands/api/commands/aggregate_omics_data.py,sha256=_UW_1dAnN6gs5lQBunDBBdl6EPWpD4cXIGFXXqUBEck,3215
-bgesdk/management/commands/api/commands/download.py,sha256=jlhR9WMVW-K1NdSSQRhT0pVMqhZAKidE4ZnlyYjjwGI,3510
-bgesdk/management/commands/api/commands/get_data_items.py,sha256=FTO2Gq7txpF_SJ6Ur6fvGdA3nW4obJNNswLgHT3SKb8,2586
-bgesdk/management/commands/api/commands/get_externals.py,sha256=1frhejqQR0MtWJhyrqC6W2K3I1jDWHfVySL70gbPhzE,1937
-bgesdk/management/commands/api/commands/get_func_abundance.py,sha256=VlCSCco8W-SiluGZ_vJCXsbfhJgPCYHgzVG9qKumqeg,2713
-bgesdk/management/commands/api/commands/get_gene_abundance.py,sha256=w8emHuIZgu7pMcSuysE8GbEwRjlNGJYIYCSKCtvjsgM,2933
-bgesdk/management/commands/api/commands/get_range_stream.py,sha256=xt-zMtAAw0C7DoWaeSVSgGspVcCma6T2KvlXFqzxorI,2957
-bgesdk/management/commands/api/commands/get_samples.py,sha256=33WJz5GGenpw12EiizkPk7FUqDpp0uZveh80957zEsY,3517
-bgesdk/management/commands/api/commands/get_taxon_abundance.py,sha256=eVJHJ2bSsxYrwvcoB9Zt7X8pmWR_Iqsf9iYz8AtmmHI,2385
-bgesdk/management/commands/api/commands/get_user.py,sha256=nUHS3BrecndpG-4IsnoaTXT6aHV_ljm8ZViATNWKyOA,1575
-bgesdk/management/commands/api/commands/get_variants.py,sha256=Po4XfbBlkD5Hgr1ipBNTZRfsAYnxHzID2xac2ITc7pg,1946
-bgesdk/management/commands/api/commands/task.py,sha256=aifstKu8w3GBplaKenD59HIN8NaUn3ZgWz4K03m2Bjo,1698
-bgesdk/management/commands/api/commands/upload.py,sha256=UPAK5oc-1vdiULXkG0yMQpYg-qJLIyYZDLzf5SQU0eY,3864
-bgesdk/management/commands/api/commands/upload_dir.py,sha256=sIYL4eEJEWxbbFY6EMG7prBBOpGBZnPYnz9UEaRGuMs,4261
+bgesdk/management/commands/api/commands/aggregate_omics_data.py,sha256=I8ujRKh33k1ul7ac2-5TivTbUPAA62setyteHa7Fk3I,3166
+bgesdk/management/commands/api/commands/applet_url.py,sha256=WQAjxTYbjHzt90byEeyt9Cv8MFz8iqeZaYP_xZno91g,2506
+bgesdk/management/commands/api/commands/download.py,sha256=jpcgeDGJzmWYUibEILTG0xNBc9a2RLERkJDFoz8fOgY,3510
+bgesdk/management/commands/api/commands/ferry_to_oss.py,sha256=AR4yViRnLF7jonx2l9qG4uCcWvabDJoQYAN9Qv51qMw,4159
+bgesdk/management/commands/api/commands/get_data_items.py,sha256=OFliXFtMd-yLIpmdSgQOZAUap01gKWez1otm9Cezido,2538
+bgesdk/management/commands/api/commands/get_externals.py,sha256=iP8cmBJXtcLe850eiMMKc1BNdzMPDrHKIV4v7QP7-dw,1888
+bgesdk/management/commands/api/commands/get_func_abundance.py,sha256=knFuDAe_HkrQydoyEiyx9RNjbbIQyg4JKkYX37nyciM,2664
+bgesdk/management/commands/api/commands/get_gene_abundance.py,sha256=B4kGjp5mm6Dz6rEjT12rE4dZCrOX9Qe91JTS6QkFx1Q,2884
+bgesdk/management/commands/api/commands/get_overview.py,sha256=Mt3mjTyjyr38R6JUg86xaPje5ZCenn4im5u2Uq48Djs,3042
+bgesdk/management/commands/api/commands/get_range_stream.py,sha256=Q3kyJu9WgMW3KoFNLVoh6RQjhGxPdCIhUaRpd5g-PD4,2909
+bgesdk/management/commands/api/commands/get_samples.py,sha256=oGtxJlxgrFU65snWqfkFO_Y8kRyTLxFLw4pxyxlqB4A,3468
+bgesdk/management/commands/api/commands/get_taxon_abundance.py,sha256=HyHnnkCGRpEIC1U0UBNsWbtlv_Gl_SdAUHgDkxrZyF4,2336
+bgesdk/management/commands/api/commands/get_user.py,sha256=3-CkPf8k9bvfZeDSmdpcnDF3q0WyYmc2dJPUGX6QR8U,1526
+bgesdk/management/commands/api/commands/get_variants.py,sha256=8NlaT-dstZnLCYsMxsEmqa0iCIhFk2xzHU2SiDsUohI,1897
+bgesdk/management/commands/api/commands/id_meta.py,sha256=PpzRclP1y9jZW-1ETKBYylvlrBWimH7aKSAC7Rz-30Q,1995
+bgesdk/management/commands/api/commands/task.py,sha256=HrZ1aQLjajkbdqI-R_13Vaz8Q4yvsZz6LXDNyyBVrTo,1649
+bgesdk/management/commands/api/commands/upload.py,sha256=K2JYuhnUQ9iLzfvJfSb0liVqyLCnb7jGg09k58ydi2o,3864
+bgesdk/management/commands/api/commands/upload_dir.py,sha256=ZNkTDRay09zbhS0ecun3OLrrvjgXVaRrBjA0-YIoFck,4261
 tests/__init__.py,sha256=v2XA5CqxLpudaDp6lNnK_rYSSII2w4L0Nj9NLnWK9xw,35
 tests/conftest.py,sha256=TdyokQEP2eHmLvuTmW2N7pTs2WKlJKws4szQmoMkVPQ,3208
 tests/test_abundance.py,sha256=OV0m0G-YmsWh9jejlu8Pr_IKtuBK5IfmZRPJ5MICwHQ,4013
@@ -47,9 +51,9 @@ tests/test_phenotype.py,sha256=3lntjMRPrYo-xFVi4mzmnyx6cLdzrTB6yxACNC4Cg7s,2264
 tests/test_samples.py,sha256=qcAf6084KtKZORPxHZkEfRMLAUwEm989BJApcUw9Cng,3341
 tests/test_user.py,sha256=QNCaIE38suadIHs0SMLM-s3bKUxZ0tjbcZCYBEWTeZ0,417
 tests/test_variants.py,sha256=rkW0wKDLyEuLpN26PG7bQzEgNwEkJlDRxjad7WDNblA,3056
-bge_python_sdk-0.6.2.dist-info/LICENSE,sha256=rX5ltHdvA1K75K8tRHlJyqnLLUgiosIAiakOYqNsx40,1063
-bge_python_sdk-0.6.2.dist-info/METADATA,sha256=1mywXE1IHru8F_FVzumsFyqaajAFtKbQv6YtTOxTKGU,7510
-bge_python_sdk-0.6.2.dist-info/WHEEL,sha256=yQN5g4mg4AybRjkgi-9yy4iQEFibGQmlz78Pik5Or-A,92
-bge_python_sdk-0.6.2.dist-info/entry_points.txt,sha256=M09ziNXA78fUAvagzThOuXmri8mVRpQLMyG9uLm34P4,45
-bge_python_sdk-0.6.2.dist-info/top_level.txt,sha256=yKxDxOG0LXoztEOTej1WRMYXQdc2BT9es4ju24nGtOM,13
-bge_python_sdk-0.6.2.dist-info/RECORD,,
+bge_python_sdk-0.7.0.dist-info/LICENSE,sha256=rX5ltHdvA1K75K8tRHlJyqnLLUgiosIAiakOYqNsx40,1063
+bge_python_sdk-0.7.0.dist-info/METADATA,sha256=Ev4qb3ltdiwP5mDAp8Ek99SgGHW8jvFt1DobW1UNXbs,7661
+bge_python_sdk-0.7.0.dist-info/WHEEL,sha256=G16H4A3IeoQmnOrYV4ueZGKSjhipXx8zc8nu9FGlvMA,92
+bge_python_sdk-0.7.0.dist-info/entry_points.txt,sha256=Kwg9cPG9uXFJgintikexeiir_eLER0cFnthglnI9-ic,46
+bge_python_sdk-0.7.0.dist-info/top_level.txt,sha256=yKxDxOG0LXoztEOTej1WRMYXQdc2BT9es4ju24nGtOM,13
+bge_python_sdk-0.7.0.dist-info/RECORD,,

{bge_python_sdk-0.6.2.dist-info → bge_python_sdk-0.7.0.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: bdist_wheel (0.41.2)
+Generator: bdist_wheel (0.37.1)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

{bge_python_sdk-0.6.2.dist-info → bge_python_sdk-0.7.0.dist-info}/entry_points.txt

@@ -1,2 +1,3 @@
 [console_scripts]
 bge = bgesdk.__main__:main
+

bgesdk/client.py

@@ -74,9 +74,9 @@ def alive(self):
 
 class OAuth2(object):
     """OAuth2 授权客户端类。
-    
+
     管理关于 OAuth2 相关接口的调用,包括获取授权页面地址、授权码交换访问令牌等;
-    
+
     Args:
         client_id (字符串): 第三方客户端 client_id;
         client_secret (字符串): 第三方客户端 client_secret;
@@ -278,6 +278,73 @@ class API(object):
         result = request.get('/profile', params=params, timeout=timeout)
         return models.Model(result)
 
+    def get_overview(
+            self,
+            idcard=None,
+            phone=None,
+            biosample_id=None,
+            project_id=None,
+            external_sample_id=None,
+            **kwargs,
+        ):
+        """获取用户数据概览
+
+        Args:
+            idcard (str, 非必填): 身份证；
+            phone (str, 非必填): 手机号；提供了参数 phone，禁止再提供 biosample_id、
+                project_id、external_sample_id；
+            biosample_id (str, 非必填): BGE 样本编号；提供了参数 biosample_id，禁
+                止再提供 phone、project_id、external_sample_id；
+            project_id (str, 非必填): BGE 项目编号；提供了参数 project_id 必须提
+                供 external_sample_id，且 phone 和 biosample_id 必须为空；
+            external_sample_id (str, 非必填): 外部样本编号；提供了参数
+                external_sample_id 必须提供 project_id，且 phone 和
+                biosample_id 必须为空；
+
+        Returns:
+            Model: 用户数据概览;
+        """
+        data = {}
+        data.update(kwargs)
+        if phone and (biosample_id or project_id or external_sample_id):
+            raise BGEError(
+                'If the phone parameter is provided, the biosample_id, '
+                'project_id, and external_sample_id are prohibited.'
+            )
+        elif biosample_id and (phone or project_id or external_sample_id):
+            raise BGEError(
+                'If the biosample_id parameter is provided, the phone, '
+                'project_id, and external_sample_id are prohibited.'
+            )
+        else:
+            if (not project_id and external_sample_id) or \
+                    (project_id and not external_sample_id):
+                raise BGEError(
+                    'The project_id and external_sample_id must be provided'
+                    ' together.'
+                )
+            if project_id and external_sample_id and (phone or biosample_id):
+                raise BGEError(
+                    'The provided parameters external_sample_id must provid'
+                    'e the project_id, and the phone and biosample_id must '
+                    'be empty.'
+                )
+        data.update({
+            'idcard': idcard,
+            'phone': phone,
+            'biosample_id': biosample_id,
+            'project_id': project_id,
+            'external_sample_id': external_sample_id,
+        })
+        timeout = self.timeout
+        verbose = self.verbose
+        max_retries = self.max_retries
+        request = HTTPRequest(
+            self.endpoint, max_retries=max_retries, verbose=verbose)
+        request.set_authorization(self.token_type, self.access_token)
+        result = request.post('/user/overview', data=data, timeout=timeout)
+        return models.Model(result)
+
     def get_variants(self, biosample_id, rsids, **params):
         """根据rsid查询变异位点信息
 
@@ -290,9 +357,9 @@ class API(object):
             list: 变异位点信息;
         """
         if biosample_id:
-            biosample_id = biosample_id.upper()
+            biosample_id = biosample_id.upper().strip()
         params.update({
-            'rsids': rsids,
+            'rsids': rsids.strip(),
             'biosample_id': biosample_id
         })
         timeout = self.timeout
@@ -302,17 +369,14 @@ class API(object):
             self.endpoint, max_retries=max_retries, verbose=verbose)
         request.set_authorization(self.token_type, self.access_token)
         result = request.get('/variants', params=params, timeout=timeout)
-        data = []
-        for item in result:
-            data.append(models.Model(item))
-        return data
+        return models.ListModel(result)
 
     def professional_variant(self, biosample_id, only_variant_site=True,
                              regions=None, bed_file=None):
         """专业级变异数据接口
-        
+
         regions 与 bed_file 须且提供其中之一
-        
+
         Args:
             biosample_id(str): 生物样品编号;
             only_variant_site(bool): 是否仅输出变异位置,默认为True;
@@ -402,12 +466,7 @@ class API(object):
             self.endpoint, max_retries=max_retries, verbose=verbose)
         request.set_authorization(self.token_type, self.access_token)
         result = request.get('/samples', params=params, timeout=timeout)
-        result = models.Model(result)
-        data = []
-        for item in result['result']:
-            data.append(models.Model(item))
-        result['result'] = data
-        return result
+        return models.Model(result)
 
     def get_sample(self, biosample_id, require_files=None):
         """获取样品
@@ -458,7 +517,7 @@ class API(object):
             self.endpoint, max_retries=max_retries, verbose=verbose)
         request.set_authorization(self.token_type, self.access_token)
         result = request.get(url, params=params, timeout=timeout)
-        return [models.Model(item) for item in result]
+        return models.ListModel(result)
 
     def register_sample(self, external_sample_id, biosample_site,
                         project_id, **kwargs):
@@ -550,14 +609,14 @@ class API(object):
             '/microbiome/taxon_abundance', params=params, timeout=timeout)
         # TODO: upgrade in the future
         # 暂时特殊处理此接口,统一丰度数据的返回方式
-        ret = models.Model({})
+        ret = dict()
         ret['count'] = count = pagination['count']
         next_page = pagination['page'] + 1
         if count == 0:
             next_page = None
         ret['next_page'] = next_page
-        ret['result'] = [models.Model(item) for item in result]
-        return ret
+        ret['result'] = result
+        return models.Model(ret)
 
     def get_func_abundance(self, biosample_id, catalog, ids=None, limit=50,
                            next_page=None, **params):
@@ -591,9 +650,7 @@ class API(object):
         request.set_authorization(self.token_type, self.access_token)
         result = request.get(
             '/microbiome/func_abundance', params=params, timeout=timeout)
-        result = models.Model(result)
-        result['result'] = [models.Model(item) for item in result['result']]
-        return result
+        return models.Model(result)
 
     def get_gene_abundance(self, biosample_id, catalog, data_type, ids=None,
                            limit=None, next_page=None, **params):
@@ -629,13 +686,11 @@ class API(object):
         request.set_authorization(self.token_type, self.access_token)
         result = request.get(
             '/microbiome/gene_abundance', params=params, timeout=timeout)
-        result = models.Model(result)
-        result['result'] = [models.Model(item) for item in result['result']]
-        return result
+        return models.Model(result)
 
     def get_upload_token(self, region_id=None, internal=False, **kwargs):
         """获取文件上传授权
-        
+
         获取的授权仅包括当前目录(不含子目录)下的文件读、写权限;
 
         Returns:
@@ -733,7 +788,7 @@ class API(object):
             sys.stdout.write('\n\n')
             sys.stdout.flush()
             object_names.append(object_name)
-        return object_names
+        return models.ListModel(object_names)
 
     def upload_dir(self, dirpath, part_size=None,
                    multipart_threshold=None, multipart_num_threads=None,
@@ -774,7 +829,7 @@ class API(object):
             sys.stdout.write('\n\n')
             sys.stdout.flush()
             object_names.append(object_name)
-        return object_names
+        return models.ListModel(object_names)
 
     def _upload(self, token, filename, file_or_string, part_size=None,
                 multipart_threshold=None, multipart_num_threads=None,
@@ -877,6 +932,8 @@ class API(object):
                                  domestic;
             chunk_size(int): 下载块大小
             expiration_time (int, 非必填): 下载地址过期时间,默认值 600s;
+        Returns:
+            None
         """
         inst = self.get_download_url(
             object_name, region=None, expiration_time=expiration_time,
@@ -922,6 +979,52 @@ class API(object):
         except Exception as e:
             raise BGEError(e)
 
+    def ferry_to_oss(self, account, password, project_no, biosample_cnt,
+                     included_filename_exts=None, sample_names=None,
+                     action=None, **kwargs):
+        """下载科服文件转存至 BGE OSS
+
+        Args:
+            account (str): 华大科技账号；
+            password(str): 华大科技密码；
+            project_no (str): 华大科技项目编号；
+            biosample_cnt(int): 样本数，必须大于或等于 0；接口将通过计算下载文件中样
+                本名（参考参数 sample_names 解释）去重后与接口提供参数对比，数量无误
+                才会下载文件；
+            included_filename_exts (str, 非必填): 下载的文件后缀名可选范围：.txt、
+                .xls、.pdf、.tar.gz、.tar.gz.md5、.fq.gz，默认包含全部可选后缀，
+                多个后缀用英文逗号分割，如: .txt,.pdf；
+            sample_names (str, 非必填)：样品名，将从过滤后将要下载的文件中，使用样本
+                名过滤所有 .fq.gz 的文件；样品名为要下载文件中文件名为 *_1.fq.gz 或
+                者 *_2.fq.gz 的文件, 如 E-V20000006992A_1.fq.gz 文件的样品名即
+                为 E-V20000006992A，多个样本名用逗号分割；
+            action (str, 非必填)：动作名，可选值：restart，如果接口调用包含
+                参数 action=restart，接口将使用接口调用的参数重新启动一个新的任务（
+                如果相同参数的任务已经在运行，将无法重新启动任务，且接口将报错）；
+        Returns:
+            Model: 科服文件下载转存结果
+        """
+        data = {}
+        data.update(kwargs)
+        data.update({
+            'account': account,
+            'password': password,
+            'project_no': project_no,
+            'biosample_cnt': biosample_cnt,
+            'included_filename_exts': included_filename_exts,
+            'sample_names': sample_names,
+            'action': action
+        })
+        timeout = self.timeout
+        verbose = self.verbose
+        max_retries = self.max_retries
+        request = HTTPRequest(
+            self.endpoint, max_retries=max_retries, verbose=verbose)
+        request.set_authorization(self.token_type, self.access_token)
+        result = request.post(
+            '/ferry/download_to_oss', data=data, timeout=timeout)
+        return models.Model(result)
+
     def aggregate_omics_data(self, data_element_id, time_dimension, start_time,
                              end_time=None, biosample_id=None,
                              interval=1, periods=100, **kwargs):
@@ -936,7 +1039,7 @@ class API(object):
             biosample_id (str, 非必填): 生物样品编号,客户端模式下为必填;
             interval (int, 非必填): 聚合时间维度间隔,默认:1
             periods (int, 非必填): 聚合时间维度返回数,默认:100,最大值: 100
-        
+
         Returns:
             Model: 返回的聚合数据
         """
@@ -968,8 +1071,7 @@ class API(object):
                          sort_direction=None, limit=100, next_page=None,
                          **kwargs):
         """返回查询数据流
-        
-        
+
         Args:
             biosample_id (str, 非必填): 生物样品编号,客户端模式下为必填;
             start_time (str, 非必填): 数据流生成时间的起始时间
@@ -977,7 +1079,7 @@ class API(object):
             sort_direction (str, 非必填): 排序方式,默认: desc
             limit (int, 非必填): 每页返回数量,默认:100
             next_page (str, 非必填): 下一页参数
-        
+
         Returns:
             Model: 返回的数据流数据
         """
@@ -1340,7 +1442,7 @@ class API(object):
 
     def upload_model_doc(self, doc_tab, model_id, doc_content):
         """上传模型文档
-        
+
         Args:
             doc_tab (str): 文档所在的 tab。
             model_id (str): 模型编号。
@@ -1399,3 +1501,65 @@ class API(object):
             self.endpoint, max_retries=max_retries, verbose=verbose)
         request.set_authorization(self.token_type, self.access_token)
         request.post('/sms/send', data=data, timeout=timeout)
+
+    def applet_url(self, code, path=None, query=None, **kwargs):
+        """小程序链接
+
+        Args:
+            code (字符串): BGE 平台微信应用中控所对应的编号(平台后台配置，需管理员处理）;
+            path (字符串，非必填): 通过 URL Link 进入的小程序页面路径，必须是已经发布的
+                小程序存在的页面，不可携带 query 。path 为空时会跳转小程序主页;
+            query (字符串，非必填): 通过 URL Link 进入小程序时的query，最大1024个字符，
+                只支持数字，大小写英文以及部分特殊字符：!#$&’()*+,/:;=?@-._~%;
+
+        Returns:
+            Model: 返回的小程序链接数据;
+        """
+        data = dict()
+        data.update(kwargs)
+        data.update({
+            'code': code,
+            'path': path,
+            'query': query,
+        })
+        timeout = self.timeout
+        verbose = self.verbose
+        max_retries = self.max_retries
+        request = HTTPRequest(
+            self.endpoint, max_retries=max_retries, verbose=verbose)
+        request.set_authorization(self.token_type, self.access_token)
+        result = request.post(
+            '/service/wechat/applet/url', data=data, timeout=timeout)
+        return models.Model(result)
+
+    def verify_id_meta(self, idcard, realname, phone=None, **kwargs):
+        """身份要素核验
+
+        传入姓名和身份证号，通过权威数据源验证其真实性和一致性。
+        传入手机号、姓名、身份证号，通过权威数据源验证其真实性和一致性，如果不一致，返回不一致
+        的原因。
+
+        Args:
+            idcard (字符串): 身份证;
+            realname (字符串): 真名;
+            phone (字符串，非必填): 手机号;
+
+        Returns:
+            Model: 返回的身份要素核验结果;
+        """
+        data = dict()
+        data.update(kwargs)
+        data.update({
+            'idcard': idcard,
+            'realname': realname,
+            'phone': phone,
+        })
+        timeout = self.timeout
+        verbose = self.verbose
+        max_retries = self.max_retries
+        request = HTTPRequest(
+            self.endpoint, max_retries=max_retries, verbose=verbose)
+        request.set_authorization(self.token_type, self.access_token)
+        result = request.post(
+            '/service/verify/id_meta', data=data, timeout=timeout)
+        return models.Model(result)

bgesdk/management/commands/api/commands/aggregate_omics_data.py

@@ -20,7 +20,7 @@ DEFAULT_TOKEN_SECTION = constants.DEFAULT_TOKEN_SECTION
 
 class Command(BaseCommand):
 
-    order = 10
+    order = 12
     help = '聚合组学数据（目前仅支持聚合数据流中符合平台设定 JSONPath 规则的数值型数据）。'
 
     def add_arguments(self, parser):
@@ -99,7 +99,6 @@ class Command(BaseCommand):
             output('[red]请求失败：[/red]')
             output_json(e.result)
             sys.exit(1)
-        output('[green]请求成功：[/green]')
         output_json(
             result,
             cls=ModelEncoder

bgesdk/management/commands/api/commands/applet_url.py

@@ -0,0 +1,77 @@
+import sys
+
+from bgesdk.client import API
+from bgesdk.error import APIError
+from bgesdk.management import constants
+from bgesdk.management.command import BaseCommand
+from bgesdk.management.utils import (
+    config_get,
+    get_active_project,
+    output,
+    output_json,
+    read_config
+)
+from bgesdk.models import ModelEncoder
+
+
+DEFAULT_OAUTH2_SECTION = constants.DEFAULT_OAUTH2_SECTION
+DEFAULT_TOKEN_SECTION = constants.DEFAULT_TOKEN_SECTION
+
+
+class Command(BaseCommand):
+
+    order = 17
+    help = (
+        '用于获取小程序加密 URL Link，链接默认于29天后过期，返回的 expire_time 字段'
+        '代表过期的时间戳（单位：秒）。'
+    )
+
+    def add_arguments(self, parser):
+        parser.add_argument(
+            'code',
+            type=str,
+            help='BGE 平台微信应用中控所对应的编号(平台后台配置，需管理员处理）。'
+        )
+        parser.add_argument(
+            '-p',
+            '--path',
+            type=str,
+            help='小程序路径；通过 URL Link 进入的小程序页面路径，必须是已经发布的小'
+                 '程序存在的页面，不可携带 query 。path 为空时会跳转小程序主页。'
+        )
+        parser.add_argument(
+            '-q',
+            '--query',
+            type=str,
+            help='小程序参数；通过 URL Link 进入小程序时的query，最大1024个字符。'
+        )
+        parser.add_argument(
+            '-t',
+            '--access_token',
+            type=str,
+            help='访问令牌，为空时默认使用 bge token 命令获取到的 access_token。'
+        )
+
+    def handler(self, args):
+        access_token = args.access_token
+        project = get_active_project()
+        oauth2_section = DEFAULT_OAUTH2_SECTION
+        token_section = DEFAULT_TOKEN_SECTION
+        code = args.code
+        path = args.path
+        query = args.query
+        config = read_config(project)
+        if not access_token:
+            access_token = config_get(config.get, token_section, 'access_token')
+        endpoint = config_get(config.get, oauth2_section, 'endpoint')
+        api = API(access_token, endpoint=endpoint, timeout=18.)
+        try:
+            result = api.applet_url(code, path=path, query=query)
+        except APIError as e:
+            output('[red]请求失败：[/red]')
+            output_json(e.result)
+            sys.exit(1)
+        output_json(
+            result,
+            cls=ModelEncoder
+        )

bgesdk/management/commands/api/commands/download.py

@@ -21,7 +21,7 @@ DEFAULT_TOKEN_SECTION = constants.DEFAULT_TOKEN_SECTION
 
 class Command(BaseCommand):
 
-    order = 13
+    order = 15
     help = '下载文件。'
 
     def add_arguments(self, parser):