benchling-sdk 1.13.0a2__py3-none-any.whl → 1.14.0a0__py3-none-any.whl

benchling_sdk/models/__init__.py

@@ -218,18 +218,10 @@ __all__ = [
     "BaseSearchInputUIBlock",
     "BaseSelectorInputUIBlock",
     "Batch",
-    "BatchCreate",
     "BatchOrInaccessibleResource",
     "BatchSchema",
     "BatchSchemasList",
     "BatchSchemasPaginatedList",
-    "BatchUpdate",
-    "BatchesArchivalChange",
-    "BatchesArchive",
-    "BatchesArchiveReason",
-    "BatchesBulkGet",
-    "BatchesPaginatedList",
-    "BatchesUnarchive",
     "BenchlingApp",
     "BenchlingAppCreate",
     "BenchlingAppDefinitionSummary",
@@ -305,6 +297,9 @@ __all__ = [
     "ButtonUiBlockCreate",
     "ButtonUiBlockType",
     "ButtonUiBlockUpdate",
+    "ChartNotePart",
+    "ChartNotePartChart",
+    "ChartNotePartType",
     "CheckboxNotePart",
     "CheckboxNotePartType",
     "CheckoutRecord",
@@ -385,7 +380,6 @@ __all__ = [
     "DateAppConfigItemType",
     "DatetimeAppConfigItem",
     "DatetimeAppConfigItemType",
-    "DefaultConcentrationSummary",
     "DeprecatedAutomationOutputProcessorsPaginatedList",
     "DeprecatedContainerVolumeForInput",
     "DeprecatedContainerVolumeForInputUnits",
@@ -509,6 +503,7 @@ __all__ = [
     "EntryTableRow",
     "EntryTemplate",
     "EntryTemplateDay",
+    "EntryTemplateUpdate",
     "EntryTemplatesPaginatedList",
     "EntryUpdate",
     "EntryUpdatedFieldsEvent",
@@ -592,6 +587,12 @@ __all__ = [
     "IntegerFieldDefinition",
     "IntegerFieldDefinitionType",
     "InteractiveUiBlock",
+    "InventoryContainerTableNotePart",
+    "InventoryContainerTableNotePartMode",
+    "InventoryContainerTableNotePartType",
+    "InventoryPlateTableNotePart",
+    "InventoryPlateTableNotePartMode",
+    "InventoryPlateTableNotePartType",
     "JsonAppConfigItem",
     "JsonAppConfigItemType",
     "LabAutomationBenchlingAppError",
@@ -621,7 +622,6 @@ __all__ = [
     "ListAppConfigurationItemsSort",
     "ListAppSessionsSort",
     "ListAssayResultsSort",
-    "ListBatchesSort",
     "ListBenchlingAppsSort",
     "ListBoxesSort",
     "ListCodonUsageTablesSort",
@@ -1284,18 +1284,10 @@ if TYPE_CHECKING:
     import benchling_api_client.v2.stable.models.base_search_input_ui_block
     import benchling_api_client.v2.stable.models.base_selector_input_ui_block
     import benchling_api_client.v2.stable.models.batch
-    import benchling_api_client.v2.stable.models.batch_create
     import benchling_api_client.v2.stable.models.batch_or_inaccessible_resource
     import benchling_api_client.v2.stable.models.batch_schema
     import benchling_api_client.v2.stable.models.batch_schemas_list
     import benchling_api_client.v2.stable.models.batch_schemas_paginated_list
-    import benchling_api_client.v2.stable.models.batch_update
-    import benchling_api_client.v2.stable.models.batches_archival_change
-    import benchling_api_client.v2.stable.models.batches_archive
-    import benchling_api_client.v2.stable.models.batches_archive_reason
-    import benchling_api_client.v2.stable.models.batches_bulk_get
-    import benchling_api_client.v2.stable.models.batches_paginated_list
-    import benchling_api_client.v2.stable.models.batches_unarchive
     import benchling_api_client.v2.stable.models.benchling_app
     import benchling_api_client.v2.stable.models.benchling_app_create
     import benchling_api_client.v2.stable.models.benchling_app_definition_summary
@@ -1371,6 +1363,9 @@ if TYPE_CHECKING:
     import benchling_api_client.v2.stable.models.button_ui_block_create
     import benchling_api_client.v2.stable.models.button_ui_block_type
     import benchling_api_client.v2.stable.models.button_ui_block_update
+    import benchling_api_client.v2.stable.models.chart_note_part
+    import benchling_api_client.v2.stable.models.chart_note_part_chart
+    import benchling_api_client.v2.stable.models.chart_note_part_type
     import benchling_api_client.v2.stable.models.checkbox_note_part
     import benchling_api_client.v2.stable.models.checkbox_note_part_type
     import benchling_api_client.v2.stable.models.checkout_record
@@ -1451,7 +1446,6 @@ if TYPE_CHECKING:
     import benchling_api_client.v2.stable.models.date_app_config_item_type
     import benchling_api_client.v2.stable.models.datetime_app_config_item
     import benchling_api_client.v2.stable.models.datetime_app_config_item_type
-    import benchling_api_client.v2.stable.models.default_concentration_summary
     import benchling_api_client.v2.stable.models.deprecated_automation_output_processors_paginated_list
     import benchling_api_client.v2.stable.models.deprecated_container_volume_for_input
     import benchling_api_client.v2.stable.models.deprecated_container_volume_for_input_units
@@ -1575,6 +1569,7 @@ if TYPE_CHECKING:
     import benchling_api_client.v2.stable.models.entry_table_row
     import benchling_api_client.v2.stable.models.entry_template
     import benchling_api_client.v2.stable.models.entry_template_day
+    import benchling_api_client.v2.stable.models.entry_template_update
     import benchling_api_client.v2.stable.models.entry_templates_paginated_list
     import benchling_api_client.v2.stable.models.entry_update
     import benchling_api_client.v2.stable.models.entry_updated_fields_event
@@ -1658,6 +1653,12 @@ if TYPE_CHECKING:
     import benchling_api_client.v2.stable.models.integer_field_definition
     import benchling_api_client.v2.stable.models.integer_field_definition_type
     import benchling_api_client.v2.stable.models.interactive_ui_block
+    import benchling_api_client.v2.stable.models.inventory_container_table_note_part
+    import benchling_api_client.v2.stable.models.inventory_container_table_note_part_mode
+    import benchling_api_client.v2.stable.models.inventory_container_table_note_part_type
+    import benchling_api_client.v2.stable.models.inventory_plate_table_note_part
+    import benchling_api_client.v2.stable.models.inventory_plate_table_note_part_mode
+    import benchling_api_client.v2.stable.models.inventory_plate_table_note_part_type
     import benchling_api_client.v2.stable.models.json_app_config_item
     import benchling_api_client.v2.stable.models.json_app_config_item_type
     import benchling_api_client.v2.stable.models.lab_automation_benchling_app_error
@@ -1687,7 +1688,6 @@ if TYPE_CHECKING:
     import benchling_api_client.v2.stable.models.list_app_configuration_items_sort
     import benchling_api_client.v2.stable.models.list_app_sessions_sort
     import benchling_api_client.v2.stable.models.list_assay_results_sort
-    import benchling_api_client.v2.stable.models.list_batches_sort
     import benchling_api_client.v2.stable.models.list_benchling_apps_sort
     import benchling_api_client.v2.stable.models.list_boxes_sort
     import benchling_api_client.v2.stable.models.list_codon_usage_tables_sort
@@ -2622,7 +2622,6 @@ if TYPE_CHECKING:
         benchling_api_client.v2.stable.models.base_selector_input_ui_block.BaseSelectorInputUIBlock
     )
     Batch = benchling_api_client.v2.stable.models.batch.Batch
-    BatchCreate = benchling_api_client.v2.stable.models.batch_create.BatchCreate
     BatchOrInaccessibleResource = (
         benchling_api_client.v2.stable.models.batch_or_inaccessible_resource.BatchOrInaccessibleResource
     )
@@ -2631,15 +2630,6 @@ if TYPE_CHECKING:
     BatchSchemasPaginatedList = (
         benchling_api_client.v2.stable.models.batch_schemas_paginated_list.BatchSchemasPaginatedList
     )
-    BatchUpdate = benchling_api_client.v2.stable.models.batch_update.BatchUpdate
-    BatchesArchivalChange = (
-        benchling_api_client.v2.stable.models.batches_archival_change.BatchesArchivalChange
-    )
-    BatchesArchive = benchling_api_client.v2.stable.models.batches_archive.BatchesArchive
-    BatchesArchiveReason = benchling_api_client.v2.stable.models.batches_archive_reason.BatchesArchiveReason
-    BatchesBulkGet = benchling_api_client.v2.stable.models.batches_bulk_get.BatchesBulkGet
-    BatchesPaginatedList = benchling_api_client.v2.stable.models.batches_paginated_list.BatchesPaginatedList
-    BatchesUnarchive = benchling_api_client.v2.stable.models.batches_unarchive.BatchesUnarchive
     BenchlingApp = benchling_api_client.v2.stable.models.benchling_app.BenchlingApp
     BenchlingAppCreate = benchling_api_client.v2.stable.models.benchling_app_create.BenchlingAppCreate
     BenchlingAppDefinitionSummary = (
@@ -2801,6 +2791,9 @@ if TYPE_CHECKING:
     ButtonUiBlockCreate = benchling_api_client.v2.stable.models.button_ui_block_create.ButtonUiBlockCreate
     ButtonUiBlockType = benchling_api_client.v2.stable.models.button_ui_block_type.ButtonUiBlockType
     ButtonUiBlockUpdate = benchling_api_client.v2.stable.models.button_ui_block_update.ButtonUiBlockUpdate
+    ChartNotePart = benchling_api_client.v2.stable.models.chart_note_part.ChartNotePart
+    ChartNotePartChart = benchling_api_client.v2.stable.models.chart_note_part_chart.ChartNotePartChart
+    ChartNotePartType = benchling_api_client.v2.stable.models.chart_note_part_type.ChartNotePartType
     CheckboxNotePart = benchling_api_client.v2.stable.models.checkbox_note_part.CheckboxNotePart
     CheckboxNotePartType = benchling_api_client.v2.stable.models.checkbox_note_part_type.CheckboxNotePartType
     CheckoutRecord = benchling_api_client.v2.stable.models.checkout_record.CheckoutRecord
@@ -2965,9 +2958,6 @@ if TYPE_CHECKING:
     DatetimeAppConfigItemType = (
         benchling_api_client.v2.stable.models.datetime_app_config_item_type.DatetimeAppConfigItemType
     )
-    DefaultConcentrationSummary = (
-        benchling_api_client.v2.stable.models.default_concentration_summary.DefaultConcentrationSummary
-    )
     DeprecatedAutomationOutputProcessorsPaginatedList = (
         benchling_api_client.v2.stable.models.deprecated_automation_output_processors_paginated_list.DeprecatedAutomationOutputProcessorsPaginatedList
     )
@@ -3229,6 +3219,7 @@ if TYPE_CHECKING:
     EntryTableRow = benchling_api_client.v2.stable.models.entry_table_row.EntryTableRow
     EntryTemplate = benchling_api_client.v2.stable.models.entry_template.EntryTemplate
     EntryTemplateDay = benchling_api_client.v2.stable.models.entry_template_day.EntryTemplateDay
+    EntryTemplateUpdate = benchling_api_client.v2.stable.models.entry_template_update.EntryTemplateUpdate
     EntryTemplatesPaginatedList = (
         benchling_api_client.v2.stable.models.entry_templates_paginated_list.EntryTemplatesPaginatedList
     )
@@ -3386,6 +3377,24 @@ if TYPE_CHECKING:
         benchling_api_client.v2.stable.models.integer_field_definition_type.IntegerFieldDefinitionType
     )
     InteractiveUiBlock = benchling_api_client.v2.stable.models.interactive_ui_block.InteractiveUiBlock
+    InventoryContainerTableNotePart = (
+        benchling_api_client.v2.stable.models.inventory_container_table_note_part.InventoryContainerTableNotePart
+    )
+    InventoryContainerTableNotePartMode = (
+        benchling_api_client.v2.stable.models.inventory_container_table_note_part_mode.InventoryContainerTableNotePartMode
+    )
+    InventoryContainerTableNotePartType = (
+        benchling_api_client.v2.stable.models.inventory_container_table_note_part_type.InventoryContainerTableNotePartType
+    )
+    InventoryPlateTableNotePart = (
+        benchling_api_client.v2.stable.models.inventory_plate_table_note_part.InventoryPlateTableNotePart
+    )
+    InventoryPlateTableNotePartMode = (
+        benchling_api_client.v2.stable.models.inventory_plate_table_note_part_mode.InventoryPlateTableNotePartMode
+    )
+    InventoryPlateTableNotePartType = (
+        benchling_api_client.v2.stable.models.inventory_plate_table_note_part_type.InventoryPlateTableNotePartType
+    )
     JsonAppConfigItem = benchling_api_client.v2.stable.models.json_app_config_item.JsonAppConfigItem
     JsonAppConfigItemType = (
         benchling_api_client.v2.stable.models.json_app_config_item_type.JsonAppConfigItemType
@@ -3449,7 +3458,6 @@ if TYPE_CHECKING:
     )
     ListAppSessionsSort = benchling_api_client.v2.stable.models.list_app_sessions_sort.ListAppSessionsSort
     ListAssayResultsSort = benchling_api_client.v2.stable.models.list_assay_results_sort.ListAssayResultsSort
-    ListBatchesSort = benchling_api_client.v2.stable.models.list_batches_sort.ListBatchesSort
     ListBenchlingAppsSort = (
         benchling_api_client.v2.stable.models.list_benchling_apps_sort.ListBenchlingAppsSort
     )
@@ -4590,18 +4598,10 @@ else:
         "BaseSearchInputUIBlock": "benchling_api_client.v2.stable.models.base_search_input_ui_block",
         "BaseSelectorInputUIBlock": "benchling_api_client.v2.stable.models.base_selector_input_ui_block",
         "Batch": "benchling_api_client.v2.stable.models.batch",
-        "BatchCreate": "benchling_api_client.v2.stable.models.batch_create",
         "BatchOrInaccessibleResource": "benchling_api_client.v2.stable.models.batch_or_inaccessible_resource",
         "BatchSchema": "benchling_api_client.v2.stable.models.batch_schema",
         "BatchSchemasList": "benchling_api_client.v2.stable.models.batch_schemas_list",
         "BatchSchemasPaginatedList": "benchling_api_client.v2.stable.models.batch_schemas_paginated_list",
-        "BatchUpdate": "benchling_api_client.v2.stable.models.batch_update",
-        "BatchesArchivalChange": "benchling_api_client.v2.stable.models.batches_archival_change",
-        "BatchesArchive": "benchling_api_client.v2.stable.models.batches_archive",
-        "BatchesArchiveReason": "benchling_api_client.v2.stable.models.batches_archive_reason",
-        "BatchesBulkGet": "benchling_api_client.v2.stable.models.batches_bulk_get",
-        "BatchesPaginatedList": "benchling_api_client.v2.stable.models.batches_paginated_list",
-        "BatchesUnarchive": "benchling_api_client.v2.stable.models.batches_unarchive",
         "BenchlingApp": "benchling_api_client.v2.stable.models.benchling_app",
         "BenchlingAppCreate": "benchling_api_client.v2.stable.models.benchling_app_create",
         "BenchlingAppDefinitionSummary": "benchling_api_client.v2.stable.models.benchling_app_definition_summary",
@@ -4677,6 +4677,9 @@ else:
         "ButtonUiBlockCreate": "benchling_api_client.v2.stable.models.button_ui_block_create",
         "ButtonUiBlockType": "benchling_api_client.v2.stable.models.button_ui_block_type",
         "ButtonUiBlockUpdate": "benchling_api_client.v2.stable.models.button_ui_block_update",
+        "ChartNotePart": "benchling_api_client.v2.stable.models.chart_note_part",
+        "ChartNotePartChart": "benchling_api_client.v2.stable.models.chart_note_part_chart",
+        "ChartNotePartType": "benchling_api_client.v2.stable.models.chart_note_part_type",
         "CheckboxNotePart": "benchling_api_client.v2.stable.models.checkbox_note_part",
         "CheckboxNotePartType": "benchling_api_client.v2.stable.models.checkbox_note_part_type",
         "CheckoutRecord": "benchling_api_client.v2.stable.models.checkout_record",
@@ -4757,7 +4760,6 @@ else:
         "DateAppConfigItemType": "benchling_api_client.v2.stable.models.date_app_config_item_type",
         "DatetimeAppConfigItem": "benchling_api_client.v2.stable.models.datetime_app_config_item",
         "DatetimeAppConfigItemType": "benchling_api_client.v2.stable.models.datetime_app_config_item_type",
-        "DefaultConcentrationSummary": "benchling_api_client.v2.stable.models.default_concentration_summary",
         "DeprecatedAutomationOutputProcessorsPaginatedList": "benchling_api_client.v2.stable.models.deprecated_automation_output_processors_paginated_list",
         "DeprecatedContainerVolumeForInput": "benchling_api_client.v2.stable.models.deprecated_container_volume_for_input",
         "DeprecatedContainerVolumeForInputUnits": "benchling_api_client.v2.stable.models.deprecated_container_volume_for_input_units",
@@ -4881,6 +4883,7 @@ else:
         "EntryTableRow": "benchling_api_client.v2.stable.models.entry_table_row",
         "EntryTemplate": "benchling_api_client.v2.stable.models.entry_template",
         "EntryTemplateDay": "benchling_api_client.v2.stable.models.entry_template_day",
+        "EntryTemplateUpdate": "benchling_api_client.v2.stable.models.entry_template_update",
         "EntryTemplatesPaginatedList": "benchling_api_client.v2.stable.models.entry_templates_paginated_list",
         "EntryUpdate": "benchling_api_client.v2.stable.models.entry_update",
         "EntryUpdatedFieldsEvent": "benchling_api_client.v2.stable.models.entry_updated_fields_event",
@@ -4964,6 +4967,12 @@ else:
         "IntegerFieldDefinition": "benchling_api_client.v2.stable.models.integer_field_definition",
         "IntegerFieldDefinitionType": "benchling_api_client.v2.stable.models.integer_field_definition_type",
         "InteractiveUiBlock": "benchling_api_client.v2.stable.models.interactive_ui_block",
+        "InventoryContainerTableNotePart": "benchling_api_client.v2.stable.models.inventory_container_table_note_part",
+        "InventoryContainerTableNotePartMode": "benchling_api_client.v2.stable.models.inventory_container_table_note_part_mode",
+        "InventoryContainerTableNotePartType": "benchling_api_client.v2.stable.models.inventory_container_table_note_part_type",
+        "InventoryPlateTableNotePart": "benchling_api_client.v2.stable.models.inventory_plate_table_note_part",
+        "InventoryPlateTableNotePartMode": "benchling_api_client.v2.stable.models.inventory_plate_table_note_part_mode",
+        "InventoryPlateTableNotePartType": "benchling_api_client.v2.stable.models.inventory_plate_table_note_part_type",
         "JsonAppConfigItem": "benchling_api_client.v2.stable.models.json_app_config_item",
         "JsonAppConfigItemType": "benchling_api_client.v2.stable.models.json_app_config_item_type",
         "LabAutomationBenchlingAppError": "benchling_api_client.v2.stable.models.lab_automation_benchling_app_error",
@@ -4993,7 +5002,6 @@ else:
         "ListAppConfigurationItemsSort": "benchling_api_client.v2.stable.models.list_app_configuration_items_sort",
         "ListAppSessionsSort": "benchling_api_client.v2.stable.models.list_app_sessions_sort",
         "ListAssayResultsSort": "benchling_api_client.v2.stable.models.list_assay_results_sort",
-        "ListBatchesSort": "benchling_api_client.v2.stable.models.list_batches_sort",
         "ListBenchlingAppsSort": "benchling_api_client.v2.stable.models.list_benchling_apps_sort",
         "ListBoxesSort": "benchling_api_client.v2.stable.models.list_boxes_sort",
         "ListCodonUsageTablesSort": "benchling_api_client.v2.stable.models.list_codon_usage_tables_sort",

benchling_sdk/models/webhooks/v0/__init__.py

@@ -50,6 +50,7 @@ __all__ = [
     "LifecycleDeactivateWebhookV0Beta",
     "LifecycleDeactivateWebhookV0BetaType",
     "LifecycleDeactivateWebhookV0Type",
+    "MessageBase",
     "MessageBaseV0",
     "RequestCreatedWebhookV2",
     "RequestCreatedWebhookV2Type",
@@ -162,6 +163,7 @@ if TYPE_CHECKING:
     import benchling_api_client.webhooks.v0.stable.models.lifecycle_deactivate_webhook_v0_beta
     import benchling_api_client.webhooks.v0.stable.models.lifecycle_deactivate_webhook_v0_beta_type
     import benchling_api_client.webhooks.v0.stable.models.lifecycle_deactivate_webhook_v0_type
+    import benchling_api_client.webhooks.v0.stable.models.message_base
     import benchling_api_client.webhooks.v0.stable.models.message_base_v0
     import benchling_api_client.webhooks.v0.stable.models.request_created_webhook_v2
     import benchling_api_client.webhooks.v0.stable.models.request_created_webhook_v2_type
@@ -354,6 +356,7 @@ if TYPE_CHECKING:
     LifecycleDeactivateWebhookV0Type = (
         benchling_api_client.webhooks.v0.stable.models.lifecycle_deactivate_webhook_v0_type.LifecycleDeactivateWebhookV0Type
     )
+    MessageBase = benchling_api_client.webhooks.v0.stable.models.message_base.MessageBase
     MessageBaseV0 = benchling_api_client.webhooks.v0.stable.models.message_base_v0.MessageBaseV0
     RequestCreatedWebhookV2 = (
         benchling_api_client.webhooks.v0.stable.models.request_created_webhook_v2.RequestCreatedWebhookV2
@@ -596,6 +599,7 @@ else:
         "LifecycleDeactivateWebhookV0Beta": "benchling_api_client.webhooks.v0.stable.models.lifecycle_deactivate_webhook_v0_beta",
         "LifecycleDeactivateWebhookV0BetaType": "benchling_api_client.webhooks.v0.stable.models.lifecycle_deactivate_webhook_v0_beta_type",
         "LifecycleDeactivateWebhookV0Type": "benchling_api_client.webhooks.v0.stable.models.lifecycle_deactivate_webhook_v0_type",
+        "MessageBase": "benchling_api_client.webhooks.v0.stable.models.message_base",
         "MessageBaseV0": "benchling_api_client.webhooks.v0.stable.models.message_base_v0",
         "RequestCreatedWebhookV2": "benchling_api_client.webhooks.v0.stable.models.request_created_webhook_v2",
         "RequestCreatedWebhookV2Type": "benchling_api_client.webhooks.v0.stable.models.request_created_webhook_v2_type",

benchling_sdk/services/v2/stable/aa_sequence_service.py

@@ -8,6 +8,7 @@ from benchling_api_client.v2.stable.api.aa_sequences import (
     bulk_update_aa_sequences,
     bulk_upsert_aa_sequences,
     create_aa_sequence,
+    find_matching_regions_aa_sequences,
     get_aa_sequence,
     list_aa_sequences,
     unarchive_aa_sequences,
@@ -37,6 +38,7 @@ from benchling_sdk.models import (
     AaSequencesBulkCreateRequest,
     AaSequencesBulkUpdateRequest,
     AaSequencesBulkUpsertRequest,
+    AaSequencesFindMatchingRegion,
     AaSequencesPaginatedList,
     AaSequencesUnarchive,
     AaSequenceUpdate,
@@ -312,3 +314,15 @@ class AaSequenceService(BaseService):
             client=self.client, json_body=body, returning=none_as_unset(returning_string)
         )
         return model_from_detailed(response)
+
+    @api_method
+    def find_matching_regions(self, find_matching_region: AaSequencesFindMatchingRegion) -> AsyncTaskLink:
+        """
+        Find matching regions for AA sequences.
+
+        See https://benchling.com/api/v2/reference#/AA%20Sequences/findMatchingRegionsAaSequences
+        """
+        response = find_matching_regions_aa_sequences.sync_detailed(
+            client=self.client, json_body=find_matching_region
+        )
+        return model_from_detailed(response)

benchling_sdk/services/v2/stable/dna_sequence_service.py

@@ -11,6 +11,7 @@ from benchling_api_client.v2.stable.api.dna_sequences import (
     bulk_update_dna_sequences,
     bulk_upsert_dna_sequences,
     create_dna_sequence,
+    find_matching_regions_dna_sequences,
     get_dna_sequence,
     list_dna_sequences,
     match_bases_dna_sequences,
@@ -45,6 +46,7 @@ from benchling_sdk.models import (
     DnaSequencesBulkCreateRequest,
     DnaSequencesBulkUpdateRequest,
     DnaSequencesBulkUpsertRequest,
+    DnaSequencesFindMatchingRegion,
     DnaSequencesPaginatedList,
     DnaSequencesUnarchive,
     DnaSequenceUpdate,
@@ -384,3 +386,15 @@ class DnaSequenceService(BaseService):
             json_body=search_bases_request,
         )
         return model_from_detailed(response)
+
+    @api_method
+    def find_matching_regions(self, find_matching_region: DnaSequencesFindMatchingRegion) -> AsyncTaskLink:
+        """
+        Find matching regions for DNA sequences.
+
+        See https://benchling.com/api/v2/reference#/DNA%20Sequences/findMatchingRegionsDnaSequences
+        """
+        response = find_matching_regions_dna_sequences.sync_detailed(
+            client=self.client, json_body=find_matching_region
+        )
+        return model_from_detailed(response)

benchling_sdk/services/v2/stable/entry_service.py

@@ -11,6 +11,7 @@ from benchling_api_client.v2.stable.api.entries import (
     list_entry_templates,
     unarchive_entries,
     update_entry,
+    update_entry_template,
 )
 from benchling_api_client.v2.types import Response
 
@@ -31,6 +32,7 @@ from benchling_sdk.models import (
     EntryExternalFile,
     EntryTemplate,
     EntryTemplatesPaginatedList,
+    EntryTemplateUpdate,
     EntryUpdate,
     ListEntriesReviewStatus,
     ListEntriesSort,
@@ -332,3 +334,24 @@ class EntryService(BaseService):
             client=self.client, entry_template_id=entry_template_id, returning=none_as_unset(returning_string)
         )
         return model_from_detailed(response)
+
+    @api_method
+    def update_entry_template(
+        self,
+        entry_template_id: str,
+        entry_template: EntryTemplateUpdate,
+        returning: Optional[Iterable[str]] = None,
+    ) -> EntryTemplate:
+        """
+        Update a notebook entry template's metadata.
+
+        See https://benchling.com/api/reference#/Entries/updateEntryTemplate
+        """
+        returning_string = optional_array_query_param(returning)
+        response = update_entry_template.sync_detailed(
+            client=self.client,
+            entry_template_id=entry_template_id,
+            json_body=entry_template,
+            returning=none_as_unset(returning_string),
+        )
+        return model_from_detailed(response)

benchling_sdk/services/v2/v2_alpha_service.py

@@ -9,7 +9,6 @@ from benchling_sdk.helpers.retry_helpers import RetryStrategy
 
 if TYPE_CHECKING:
     from benchling_sdk.services.v2.alpha.v2_alpha_app_service import V2AlphaAppService
-    from benchling_sdk.services.v2.alpha.v2_alpha_dna_sequence_service import V2AlphaDnaSequenceService
 
 from benchling_sdk.services.v2.base_service import BaseService
 
@@ -24,7 +23,6 @@ class V2AlphaService(BaseService):
     """
 
     _app_service: Optional[V2AlphaAppService]
-    _dna_sequence_service: Optional[V2AlphaDnaSequenceService]
     _alpha_client: Client
 
     def __init__(self, client: Client, retry_strategy: RetryStrategy = RetryStrategy()):
@@ -53,21 +51,3 @@ class V2AlphaService(BaseService):
 
             self._app_service = V2AlphaAppService(self._alpha_client, self._retry_strategy)
         return self._app_service
-
-    @property
-    def dna_sequences(self) -> V2AlphaDnaSequenceService:
-        """
-        V2-Alpha DNA Sequences.
-
-        DNA sequences are the bread and butter of the Benchling Molecular Biology suite. On Benchling, these are
-        comprised of a string of nucleotides and collections of other attributes, such as annotations and primers.
-
-        See https://benchling.com/api/v2-alpha/reference#/DNA%20Sequences
-        """
-        if self._dna_sequence_service is None:
-            from benchling_sdk.services.v2.alpha.v2_alpha_dna_sequence_service import (
-                V2AlphaDnaSequenceService,
-            )
-
-            self._dna_sequence_service = V2AlphaDnaSequenceService(self._alpha_client, self._retry_strategy)
-        return self._dna_sequence_service

benchling_sdk/services/v2/v2_beta_service.py

@@ -10,7 +10,6 @@ from benchling_sdk.services.v2.base_service import BaseService
 from benchling_sdk.services.v2.beta.v2_beta_data_frame_service import V2BetaDataFrameService
 
 if TYPE_CHECKING:
-    from benchling_sdk.services.v2.beta.v2_beta_aa_sequence_service import V2BetaAaSequenceService
     from benchling_sdk.services.v2.beta.v2_beta_app_service import V2BetaAppService
     from benchling_sdk.services.v2.beta.v2_beta_collaboration_service import V2BetaCollaborationService
     from benchling_sdk.services.v2.beta.v2_beta_entry_service import V2BetaEntryService
@@ -28,7 +27,6 @@ class V2BetaService(BaseService):
     See https://benchling.com/api/v2-beta/reference
     """
 
-    _aa_sequence_service: Optional[V2BetaAaSequenceService]
     _app_service: Optional[V2BetaAppService]
     _collaboration_service: Optional[V2BetaCollaborationService]
     _data_frame_service: Optional[V2BetaDataFrameService]
@@ -56,23 +54,6 @@ class V2BetaService(BaseService):
         self._project_service = None
         self._worklist_service = None
 
-    @property
-    def aa_sequences(self) -> V2BetaAaSequenceService:
-        """
-        V2-Beta AA Sequences.
-
-        AA Sequences are the working units of cells that make everything run (they help make structures, catalyze
-        reactions and allow for signaling - a kind of internal cell communication). On Benchling, these are comprised
-        of a string of amino acids and collections of other attributes, such as annotations.
-
-        See https://benchling.com/api/v2-beta/reference#/AA%20Sequences
-        """
-        if self._aa_sequence_service is None:
-            from benchling_sdk.services.v2.beta.v2_beta_aa_sequence_service import V2BetaAaSequenceService
-
-            self._aa_sequence_service = V2BetaAaSequenceService(self._beta_client, self.retry_strategy)
-        return self._aa_sequence_service
-
     @property
     def apps(self) -> V2BetaAppService:
         """

{benchling_sdk-1.13.0a2.dist-info → benchling_sdk-1.14.0a0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: benchling-sdk
-Version: 1.13.0a2
+Version: 1.14.0a0
 Summary: SDK for interacting with the Benchling Platform.
 License: Apache-2.0
 Author: Benchling Support
@@ -17,7 +17,7 @@ Provides-Extra: python-jose
 Requires-Dist: PyYAML (>=6.0,<7.0)
 Requires-Dist: attrs (>=20.1.0,<23)
 Requires-Dist: backoff (>=1.10.0,<2.0.0)
-Requires-Dist: benchling-api-client (==2.0.303)
+Requires-Dist: benchling-api-client (==2.0.305)
 Requires-Dist: certifi (>=2022.12.7)
 Requires-Dist: cryptography (>=42.0.0) ; extra == "cryptography"
 Requires-Dist: dataclasses-json (>=0.5.2,<0.6.0)

{benchling_sdk-1.13.0a2.dist-info → benchling_sdk-1.14.0a0.dist-info}/RECORD

@@ -43,18 +43,16 @@ benchling_sdk/helpers/response_helpers.py,sha256=vtmb9lEEKy3dRFre3Q0R4XaLBEaS_rr
 benchling_sdk/helpers/retry_helpers.py,sha256=SeKOPjnJIes6UsD7kVqlYKBYmwH_DCHdllnG3jys3N8,2740
 benchling_sdk/helpers/serialization_helpers.py,sha256=IUS0uGU_EiZvb8O-bTViUaROmxKcvdX3JeR9iKsWAG8,3662
 benchling_sdk/helpers/transaction_manager.py,sha256=HcSDsgGK7Rb93bgv6fpb4HvQUT-tqP0lXgVa_bWCDh4,3663
-benchling_sdk/models/__init__.py,sha256=TyCuK78vffseJIvJbnkOZTNgTHSkP1b6oLo99XjX78M,352328
+benchling_sdk/models/__init__.py,sha256=V7obyEeyaj8miIgnsu22nGUijWRsc7vL4XgtyKnhfJA,353074
 benchling_sdk/models/webhooks/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-benchling_sdk/models/webhooks/v0/__init__.py,sha256=DZRp66E1J2a77gyLE7Vrmhy8eK85MXwsYHgvZMyKvow,48568
+benchling_sdk/models/webhooks/v0/__init__.py,sha256=tEHA5YxF_WPBjvOIT8UxQjxFAnX--fQmReATINpTz7Y,48834
 benchling_sdk/py.typed,sha256=8ZJUsxZiuOy1oJeVhsTWQhTG_6pTVHVXk5hJL79ebTk,25
 benchling_sdk/services/__init__.py,sha256=K7N-sxMKhIsFroLe_tJIRcKJJuoShTCxiD_bfUz9958,85
 benchling_sdk/services/v2/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 benchling_sdk/services/v2/alpha/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 benchling_sdk/services/v2/alpha/v2_alpha_app_service.py,sha256=cR3nk6oxV2B-ewcUooQ4iqMZJQaj_wvwGyON2eL08Hc,1443
-benchling_sdk/services/v2/alpha/v2_alpha_dna_sequence_service.py,sha256=XzpaPWbdxbwE_LJ5RheKHNAwdjPNfr7-o3IXmJsQ6UI,1347
 benchling_sdk/services/v2/base_service.py,sha256=g4Qn001slCJTvqDvRmbImJNBJ8lPJgMVL1H4Xxc8D2o,951
 benchling_sdk/services/v2/beta/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-benchling_sdk/services/v2/beta/v2_beta_aa_sequence_service.py,sha256=ED5jOL1N5JzuikpVPZNj0Wi5czwTfA9HChQca1fwA3I,1410
 benchling_sdk/services/v2/beta/v2_beta_app_service.py,sha256=nVOEQ3ESkUo2e4p_MYMq-VUpEx2wNpJIY7ZZ8UuHnuQ,1385
 benchling_sdk/services/v2/beta/v2_beta_collaboration_service.py,sha256=epLHLdDRfj8ni2-45WWFSpOgQG-kTmbxTffRP1mnim0,5753
 benchling_sdk/services/v2/beta/v2_beta_data_frame_service.py,sha256=oqCVyYBK7YECXYIDWJ5VIaiAO-W7GXC7xd0Wy1swTmU,14853
@@ -63,7 +61,7 @@ benchling_sdk/services/v2/beta/v2_beta_folder_service.py,sha256=b6-D_eDTF1e2l2YL
 benchling_sdk/services/v2/beta/v2_beta_project_service.py,sha256=8Wk0u6dtiewytfuJ2RaybMOfqih7YF74cJF_wsetJpM,4926
 benchling_sdk/services/v2/beta/v2_beta_worklist_service.py,sha256=tFMe-7Wbw3qISe-T5EsnYVsmcd1P8Aw1NoWmNA5MroU,5544
 benchling_sdk/services/v2/stable/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-benchling_sdk/services/v2/stable/aa_sequence_service.py,sha256=ttiN9YeezeBmJW8RAyqwwSYRDk2i2EMDNvArgVPsM-w,12935
+benchling_sdk/services/v2/stable/aa_sequence_service.py,sha256=75l2QsE6WZ5EJvSDmImZhGi-kc6TPYCFnVpojOKpB1c,13492
 benchling_sdk/services/v2/stable/api_service.py,sha256=e0RNp4Jne9UTaHOYMOxxXJpsyUO3WMSFPzN7hB8iliU,12371
 benchling_sdk/services/v2/stable/app_service.py,sha256=dy9FMVvMiJrkYbxZswKuB37EB9K_jCqQr9FfAa0BMgE,23126
 benchling_sdk/services/v2/stable/assay_result_service.py,sha256=_qtSpMznVrGHlB2VnHI87IPjVQHCX1pZbLPJ_LYuW7U,13362
@@ -75,10 +73,10 @@ benchling_sdk/services/v2/stable/custom_entity_service.py,sha256=LOATrTh7Vv6dXWl
 benchling_sdk/services/v2/stable/custom_notation_service.py,sha256=LCnt8hoCkkSRbz-bXUaYbuMaE-1XdYmXB0MgeQ30POc,2141
 benchling_sdk/services/v2/stable/dna_alignments_service.py,sha256=leJaPt7Uk1PyxfO9LXTVi2DjLyqcXgeMselftJaGJA4,7445
 benchling_sdk/services/v2/stable/dna_oligo_service.py,sha256=0D3X98UxWWolkCG_IxiPE3oiFMwyqC7vJlJCyEbNDt4,11128
-benchling_sdk/services/v2/stable/dna_sequence_service.py,sha256=7IXZoqDgRTDcpg9BQEMO71XkBIXOQq-mp6jp7_OaroE,15746
+benchling_sdk/services/v2/stable/dna_sequence_service.py,sha256=8s4Lgitf4k-Ma0XuXhvG-68A1v4YXZzvtqt9VgukOUQ,16310
 benchling_sdk/services/v2/stable/dropdown_service.py,sha256=AcnATXU_TChhSm9NX8dx9wnbxeBwACzThw5zM3yPYmk,4919
 benchling_sdk/services/v2/stable/entity_service.py,sha256=NGDjng4rwiL6EeDCEs5oy9ciKV6CPv71S1l7A8zM0Uk,2190
-benchling_sdk/services/v2/stable/entry_service.py,sha256=nGK8bctxpaeyHFNj-aY53TbTOwGvqbd8xqQgs-nncKI,12935
+benchling_sdk/services/v2/stable/entry_service.py,sha256=7HypcoX0vWDi5hFMtqFO6RpKc6IclO3HMQaWdvKNXyQ,13706
 benchling_sdk/services/v2/stable/event_service.py,sha256=--j-oqKR-Ld5d4QiJ6aofOr9LTBCM7maqwRvo2goSPA,2538
 benchling_sdk/services/v2/stable/export_service.py,sha256=T8ir9yRyA8rMUXagLAWYR4cYtOzxt6JxjlnQwExk_HU,1080
 benchling_sdk/services/v2/stable/feature_library_service.py,sha256=h3vdttbJzWWG-297FedtmDXSFEUP0KVGU5Y2D_VW-KA,9767
@@ -107,11 +105,11 @@ benchling_sdk/services/v2/stable/warehouse_service.py,sha256=_gVTwJZ5BcaNBG0k8I0
 benchling_sdk/services/v2/stable/workflow_output_service.py,sha256=VD0RvOBCkgX_YwUoQYQPR_PyGJXuIau5beq9bK75VXM,9993
 benchling_sdk/services/v2/stable/workflow_task_group_service.py,sha256=SSfHDH-Eniz09HG_qSPSfSVHU3BpvTbgGhOQS4iWcAw,8848
 benchling_sdk/services/v2/stable/workflow_task_service.py,sha256=pOhwFmWVk1jh3A9C70LpLhYjlgk2DcGCfjO8Uup9ScQ,12819
-benchling_sdk/services/v2/v2_alpha_service.py,sha256=vNfYK0Dheml9ozR_0tzTlA3blPDTdfTQR8ppaQ6xuu4,2609
-benchling_sdk/services/v2/v2_beta_service.py,sha256=URRSAdNuoSg322Ej18st0Z4SPBw7-y0udOeBpw2Lomg,7149
+benchling_sdk/services/v2/v2_alpha_service.py,sha256=tlGZTudMaMIgzwHGDJiHB5YVPDOwuQ8PxWYgnc2wfeI,1665
+benchling_sdk/services/v2/v2_beta_service.py,sha256=B68EANGivafp67dWuXO1Rcl_mqmIX6-rSjd62t6mniI,6168
 benchling_sdk/services/v2/v2_stable_service.py,sha256=zZ9Mrx0TkDwPG62uNAzz79wI2hUwcaSO3qAJX29Fij0,36051
 benchling_sdk/services/v2_service.py,sha256=3eoIjYEmGLPdWCpBN0pl7q7_HNWCsUvfvTn3Hcz0wSM,2860
-benchling_sdk-1.13.0a2.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
-benchling_sdk-1.13.0a2.dist-info/METADATA,sha256=BGhi6zni7XeC9euZUNjpoB61nYZp6iY2VDgvOg4vH2c,2118
-benchling_sdk-1.13.0a2.dist-info/WHEEL,sha256=d2fvjOD7sXsVzChCqf0Ty0JbHKBaLYwDbGQDwQTnJ50,88
-benchling_sdk-1.13.0a2.dist-info/RECORD,,
+benchling_sdk-1.14.0a0.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
+benchling_sdk-1.14.0a0.dist-info/METADATA,sha256=SQJ4L_5y9WW7Inm-sa_X6sNNdWZk4p7eL36w8i_vOP4,2118
+benchling_sdk-1.14.0a0.dist-info/WHEEL,sha256=d2fvjOD7sXsVzChCqf0Ty0JbHKBaLYwDbGQDwQTnJ50,88
+benchling_sdk-1.14.0a0.dist-info/RECORD,,

benchling_sdk/services/v2/alpha/v2_alpha_dna_sequence_service.py

@@ -1,32 +0,0 @@
-from benchling_api_client.v2.alpha.api.dna_sequences import find_matching_regions_dna_sequences
-from benchling_api_client.v2.alpha.api.dna_sequences.find_matching_regions_dna_sequences import (
-    DnaSequencesFindMatchingRegion,
-)
-
-from benchling_sdk.helpers.decorators import api_method
-from benchling_sdk.helpers.response_helpers import model_from_detailed
-from benchling_sdk.models import AsyncTaskLink
-from benchling_sdk.services.v2.base_service import BaseService
-
-
-class V2AlphaDnaSequenceService(BaseService):
-    """
-    V2-Alpha DNA Sequences.
-
-    DNA sequences are the bread and butter of the Benchling Molecular Biology suite. On Benchling, these are
-    comprised of a string of nucleotides and collections of other attributes, such as annotations and primers.
-
-    See https://benchling.com/api/v2-alpha/reference#/DNA%20Sequences
-    """
-
-    @api_method
-    def find_matching_regions(self, find_matching_region: DnaSequencesFindMatchingRegion) -> AsyncTaskLink:
-        """
-        Find matching regions for DNA sequences.
-
-        See https://benchling.com/api/v2-alpha/reference#/DNA%20Sequences/findMatchingRegionsDnaSequences
-        """
-        response = find_matching_regions_dna_sequences.sync_detailed(
-            client=self.client, json_body=find_matching_region
-        )
-        return model_from_detailed(response)

benchling_sdk/services/v2/beta/v2_beta_aa_sequence_service.py

@@ -1,33 +0,0 @@
-from benchling_api_client.v2.beta.api.aa_sequences import find_matching_regions_aa_sequences
-from benchling_api_client.v2.beta.models.aa_sequences_find_matching_region import (
-    AaSequencesFindMatchingRegion,
-)
-
-from benchling_sdk.helpers.decorators import api_method
-from benchling_sdk.helpers.response_helpers import model_from_detailed
-from benchling_sdk.models import AsyncTaskLink
-from benchling_sdk.services.v2.base_service import BaseService
-
-
-class V2BetaAaSequenceService(BaseService):
-    """
-    V2-Beta AA Sequences.
-
-    AA Sequences are the working units of cells that make everything run (they help make structures, catalyze
-    reactions and allow for signaling - a kind of internal cell communication). On Benchling, these are comprised
-    of a string of amino acids and collections of other attributes, such as annotations.
-
-    See https://benchling.com/api/v2-beta/reference#/AA%20Sequences
-    """
-
-    @api_method
-    def find_matching_regions(self, find_matching_region: AaSequencesFindMatchingRegion) -> AsyncTaskLink:
-        """
-        Find matching regions for AA sequences.
-
-        See https://benchling.com/api/v2-beta/reference#/AA%20Sequences/findMatchingRegionsAaSequences
-        """
-        response = find_matching_regions_aa_sequences.sync_detailed(
-            client=self.client, json_body=find_matching_region
-        )
-        return model_from_detailed(response)