benchling-api-client 2.0.414__py3-none-any.whl → 2.0.416__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (56) hide show
  1. benchling_api_client/models/container_content.py +183 -26
  2. benchling_api_client/models/entity.py +19 -7
  3. benchling_api_client/models/entity_or_inaccessible_resource.py +19 -7
  4. benchling_api_client/models/field_type.py +1 -0
  5. benchling_api_client/models/molecule_with_entity_type.py +787 -0
  6. benchling_api_client/models/molecule_with_entity_type_entity_type.py +22 -0
  7. benchling_api_client/models/registered_entities_list.py +89 -32
  8. benchling_api_client/models/request_response_samples_item_entity.py +216 -74
  9. benchling_api_client/models/rna_sequence_with_entity_type.py +1151 -0
  10. benchling_api_client/models/rna_sequence_with_entity_type_entity_type.py +22 -0
  11. benchling_api_client/models/simple_field_definition_type.py +1 -0
  12. benchling_api_client/v2/alpha/models/app_config_field_type.py +1 -0
  13. benchling_api_client/v2/alpha/models/field_type.py +1 -0
  14. benchling_api_client/v2/alpha/openapi.yaml +2 -0
  15. benchling_api_client/v2/beta/models/aa_sequence_with_entity_type.py +865 -0
  16. benchling_api_client/v2/beta/models/aa_sequence_with_entity_type_entity_type.py +22 -0
  17. benchling_api_client/v2/beta/models/app_config_field_type.py +1 -0
  18. benchling_api_client/v2/beta/models/container_content.py +183 -26
  19. benchling_api_client/v2/beta/models/custom_entity_creator.py +2 -100
  20. benchling_api_client/v2/beta/models/custom_entity_with_entity_type.py +747 -0
  21. benchling_api_client/v2/beta/models/custom_entity_with_entity_type_entity_type.py +22 -0
  22. benchling_api_client/v2/beta/models/dna_oligo_with_entity_type.py +972 -0
  23. benchling_api_client/v2/beta/models/dna_oligo_with_entity_type_entity_type.py +22 -0
  24. benchling_api_client/v2/beta/models/dna_sequence_with_entity_type.py +1102 -0
  25. benchling_api_client/v2/beta/models/dna_sequence_with_entity_type_entity_type.py +22 -0
  26. benchling_api_client/v2/beta/models/entity.py +19 -7
  27. benchling_api_client/v2/beta/models/entity_or_inaccessible_resource.py +19 -7
  28. benchling_api_client/v2/beta/models/field_type.py +1 -0
  29. benchling_api_client/v2/beta/models/mixture_creator.py +2 -100
  30. benchling_api_client/v2/beta/models/mixture_with_entity_type.py +867 -0
  31. benchling_api_client/v2/beta/models/mixture_with_entity_type_entity_type.py +22 -0
  32. benchling_api_client/v2/beta/models/molecule_with_entity_type.py +787 -0
  33. benchling_api_client/v2/beta/models/molecule_with_entity_type_entity_type.py +22 -0
  34. benchling_api_client/v2/beta/models/rna_oligo_with_entity_type.py +972 -0
  35. benchling_api_client/v2/beta/models/rna_oligo_with_entity_type_entity_type.py +22 -0
  36. benchling_api_client/v2/beta/models/rna_sequence.py +1109 -0
  37. benchling_api_client/v2/beta/models/rna_sequence_part.py +183 -0
  38. benchling_api_client/v2/beta/models/rna_sequence_with_entity_type.py +1151 -0
  39. benchling_api_client/v2/beta/models/rna_sequence_with_entity_type_entity_type.py +22 -0
  40. benchling_api_client/v2/beta/openapi.yaml +218 -6
  41. benchling_api_client/v2/stable/models/container_content.py +183 -26
  42. benchling_api_client/v2/stable/models/entity.py +19 -7
  43. benchling_api_client/v2/stable/models/entity_or_inaccessible_resource.py +19 -7
  44. benchling_api_client/v2/stable/models/field_type.py +1 -0
  45. benchling_api_client/v2/stable/models/molecule_with_entity_type.py +787 -0
  46. benchling_api_client/v2/stable/models/molecule_with_entity_type_entity_type.py +22 -0
  47. benchling_api_client/v2/stable/models/registered_entities_list.py +89 -32
  48. benchling_api_client/v2/stable/models/request_response_samples_item_entity.py +216 -74
  49. benchling_api_client/v2/stable/models/rna_sequence_with_entity_type.py +1151 -0
  50. benchling_api_client/v2/stable/models/rna_sequence_with_entity_type_entity_type.py +22 -0
  51. benchling_api_client/v2/stable/models/simple_field_definition_type.py +1 -0
  52. benchling_api_client/v2/stable/openapi.yaml +42 -22
  53. {benchling_api_client-2.0.414.dist-info → benchling_api_client-2.0.416.dist-info}/METADATA +1 -1
  54. {benchling_api_client-2.0.414.dist-info → benchling_api_client-2.0.416.dist-info}/RECORD +56 -30
  55. {benchling_api_client-2.0.414.dist-info → benchling_api_client-2.0.416.dist-info}/LICENSE +0 -0
  56. {benchling_api_client-2.0.414.dist-info → benchling_api_client-2.0.416.dist-info}/WHEEL +0 -0
@@ -0,0 +1,22 @@
1
+ from enum import Enum
2
+ from functools import lru_cache
3
+ from typing import cast
4
+
5
+ from ..extensions import Enums
6
+
7
+
8
+ class DnaSequenceWithEntityTypeEntityType(Enums.KnownString):
9
+ DNA_SEQUENCE = "dna_sequence"
10
+
11
+ def __str__(self) -> str:
12
+ return str(self.value)
13
+
14
+ @staticmethod
15
+ @lru_cache(maxsize=None)
16
+ def of_unknown(val: str) -> "DnaSequenceWithEntityTypeEntityType":
17
+ if not isinstance(val, str):
18
+ raise ValueError(
19
+ f"Value of DnaSequenceWithEntityTypeEntityType must be a string (encountered: {val})"
20
+ )
21
+ newcls = Enum("DnaSequenceWithEntityTypeEntityType", {"_UNKNOWN": val}, type=Enums.UnknownString) # type: ignore
22
+ return cast(DnaSequenceWithEntityTypeEntityType, getattr(newcls, "_UNKNOWN"))
@@ -1,11 +1,23 @@
1
1
  from typing import Union
2
2
 
3
3
  from ..extensions import UnknownType
4
- from ..models.aa_sequence import AaSequence
5
- from ..models.custom_entity import CustomEntity
6
- from ..models.dna_oligo import DnaOligo
7
- from ..models.dna_sequence import DnaSequence
8
- from ..models.mixture import Mixture
9
- from ..models.rna_oligo import RnaOligo
4
+ from ..models.aa_sequence_with_entity_type import AaSequenceWithEntityType
5
+ from ..models.custom_entity_with_entity_type import CustomEntityWithEntityType
6
+ from ..models.dna_oligo_with_entity_type import DnaOligoWithEntityType
7
+ from ..models.dna_sequence_with_entity_type import DnaSequenceWithEntityType
8
+ from ..models.mixture_with_entity_type import MixtureWithEntityType
9
+ from ..models.molecule_with_entity_type import MoleculeWithEntityType
10
+ from ..models.rna_oligo_with_entity_type import RnaOligoWithEntityType
11
+ from ..models.rna_sequence_with_entity_type import RnaSequenceWithEntityType
10
12
 
11
- Entity = Union[DnaSequence, AaSequence, Mixture, DnaOligo, RnaOligo, CustomEntity, UnknownType]
13
+ Entity = Union[
14
+ DnaSequenceWithEntityType,
15
+ RnaSequenceWithEntityType,
16
+ AaSequenceWithEntityType,
17
+ MixtureWithEntityType,
18
+ DnaOligoWithEntityType,
19
+ RnaOligoWithEntityType,
20
+ MoleculeWithEntityType,
21
+ CustomEntityWithEntityType,
22
+ UnknownType,
23
+ ]
@@ -1,16 +1,28 @@
1
1
  from typing import Union
2
2
 
3
3
  from ..extensions import UnknownType
4
- from ..models.aa_sequence import AaSequence
5
- from ..models.custom_entity import CustomEntity
6
- from ..models.dna_oligo import DnaOligo
7
- from ..models.dna_sequence import DnaSequence
4
+ from ..models.aa_sequence_with_entity_type import AaSequenceWithEntityType
5
+ from ..models.custom_entity_with_entity_type import CustomEntityWithEntityType
6
+ from ..models.dna_oligo_with_entity_type import DnaOligoWithEntityType
7
+ from ..models.dna_sequence_with_entity_type import DnaSequenceWithEntityType
8
8
  from ..models.inaccessible_resource import InaccessibleResource
9
- from ..models.mixture import Mixture
10
- from ..models.rna_oligo import RnaOligo
9
+ from ..models.mixture_with_entity_type import MixtureWithEntityType
10
+ from ..models.molecule_with_entity_type import MoleculeWithEntityType
11
+ from ..models.rna_oligo_with_entity_type import RnaOligoWithEntityType
12
+ from ..models.rna_sequence_with_entity_type import RnaSequenceWithEntityType
11
13
 
12
14
  EntityOrInaccessibleResource = Union[
13
- Union[DnaSequence, AaSequence, Mixture, DnaOligo, RnaOligo, CustomEntity, UnknownType],
15
+ Union[
16
+ DnaSequenceWithEntityType,
17
+ RnaSequenceWithEntityType,
18
+ AaSequenceWithEntityType,
19
+ MixtureWithEntityType,
20
+ DnaOligoWithEntityType,
21
+ RnaOligoWithEntityType,
22
+ MoleculeWithEntityType,
23
+ CustomEntityWithEntityType,
24
+ UnknownType,
25
+ ],
14
26
  InaccessibleResource,
15
27
  UnknownType,
16
28
  ]
@@ -11,6 +11,7 @@ class FieldType(Enums.KnownString):
11
11
  CUSTOM_ENTITY_LINK = "custom_entity_link"
12
12
  ENTITY_LINK = "entity_link"
13
13
  MIXTURE_LINK = "mixture_link"
14
+ MOLECULE_LINK = "molecule_link"
14
15
  DROPDOWN = "dropdown"
15
16
  PART_LINK = "part_link"
16
17
  TRANSLATION_LINK = "translation_link"
@@ -1,10 +1,7 @@
1
- from typing import Any, cast, Dict, List, Optional, Type, TypeVar, Union
1
+ from typing import Any, Dict, List, Optional, Type, TypeVar
2
2
 
3
3
  import attr
4
4
 
5
- from ..extensions import NotPresentError
6
- from ..types import UNSET, Unset
7
-
8
5
  T = TypeVar("T", bound="MixtureCreator")
9
6
 
10
7
 
@@ -12,33 +9,17 @@ T = TypeVar("T", bound="MixtureCreator")
12
9
  class MixtureCreator:
13
10
  """ """
14
11
 
15
- _handle: Union[Unset, str] = UNSET
16
- _id: Union[Unset, str] = UNSET
17
- _name: Union[Unset, str] = UNSET
18
12
  additional_properties: Dict[str, Any] = attr.ib(init=False, factory=dict)
19
13
 
20
14
  def __repr__(self):
21
15
  fields = []
22
- fields.append("handle={}".format(repr(self._handle)))
23
- fields.append("id={}".format(repr(self._id)))
24
- fields.append("name={}".format(repr(self._name)))
25
16
  fields.append("additional_properties={}".format(repr(self.additional_properties)))
26
17
  return "MixtureCreator({})".format(", ".join(fields))
27
18
 
28
19
  def to_dict(self) -> Dict[str, Any]:
29
- handle = self._handle
30
- id = self._id
31
- name = self._name
32
20
 
33
21
  field_dict: Dict[str, Any] = {}
34
22
  field_dict.update(self.additional_properties)
35
- # Allow the model to serialize even if it was created outside of the constructor, circumventing validation
36
- if handle is not UNSET:
37
- field_dict["handle"] = handle
38
- if id is not UNSET:
39
- field_dict["id"] = id
40
- if name is not UNSET:
41
- field_dict["name"] = name
42
23
 
43
24
  return field_dict
44
25
 
@@ -46,44 +27,7 @@ class MixtureCreator:
46
27
  def from_dict(cls: Type[T], src_dict: Dict[str, Any], strict: bool = False) -> T:
47
28
  d = src_dict.copy()
48
29
 
49
- def get_handle() -> Union[Unset, str]:
50
- handle = d.pop("handle")
51
- return handle
52
-
53
- try:
54
- handle = get_handle()
55
- except KeyError:
56
- if strict:
57
- raise
58
- handle = cast(Union[Unset, str], UNSET)
59
-
60
- def get_id() -> Union[Unset, str]:
61
- id = d.pop("id")
62
- return id
63
-
64
- try:
65
- id = get_id()
66
- except KeyError:
67
- if strict:
68
- raise
69
- id = cast(Union[Unset, str], UNSET)
70
-
71
- def get_name() -> Union[Unset, str]:
72
- name = d.pop("name")
73
- return name
74
-
75
- try:
76
- name = get_name()
77
- except KeyError:
78
- if strict:
79
- raise
80
- name = cast(Union[Unset, str], UNSET)
81
-
82
- mixture_creator = cls(
83
- handle=handle,
84
- id=id,
85
- name=name,
86
- )
30
+ mixture_creator = cls()
87
31
 
88
32
  mixture_creator.additional_properties = d
89
33
  return mixture_creator
@@ -106,45 +50,3 @@ class MixtureCreator:
106
50
 
107
51
  def get(self, key, default=None) -> Optional[Any]:
108
52
  return self.additional_properties.get(key, default)
109
-
110
- @property
111
- def handle(self) -> str:
112
- if isinstance(self._handle, Unset):
113
- raise NotPresentError(self, "handle")
114
- return self._handle
115
-
116
- @handle.setter
117
- def handle(self, value: str) -> None:
118
- self._handle = value
119
-
120
- @handle.deleter
121
- def handle(self) -> None:
122
- self._handle = UNSET
123
-
124
- @property
125
- def id(self) -> str:
126
- if isinstance(self._id, Unset):
127
- raise NotPresentError(self, "id")
128
- return self._id
129
-
130
- @id.setter
131
- def id(self, value: str) -> None:
132
- self._id = value
133
-
134
- @id.deleter
135
- def id(self) -> None:
136
- self._id = UNSET
137
-
138
- @property
139
- def name(self) -> str:
140
- if isinstance(self._name, Unset):
141
- raise NotPresentError(self, "name")
142
- return self._name
143
-
144
- @name.setter
145
- def name(self, value: str) -> None:
146
- self._name = value
147
-
148
- @name.deleter
149
- def name(self) -> None:
150
- self._name = UNSET