bella-companion 0.0.29__py3-none-any.whl → 0.0.32__py3-none-any.whl

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Files changed (45) hide show
  1. bella_companion/eucovid/run_beast.py +5 -11
  2. bella_companion/platyrrhine/run_beast.py +1 -6
  3. bella_companion-0.0.32.dist-info/METADATA +11 -0
  4. bella_companion-0.0.32.dist-info/RECORD +41 -0
  5. {bella_companion-0.0.29.dist-info → bella_companion-0.0.32.dist-info}/WHEEL +2 -1
  6. bella_companion-0.0.32.dist-info/entry_points.txt +2 -0
  7. bella_companion-0.0.32.dist-info/top_level.txt +1 -0
  8. bella_companion/eucovid/beast_configs/GLM.xml +0 -169
  9. bella_companion/eucovid/beast_configs/MLP.xml +0 -170
  10. bella_companion/eucovid/beast_configs/Nonparametric.xml +0 -399
  11. bella_companion/eucovid/data/case_data.tsv +0 -346
  12. bella_companion/eucovid/data/change_dates.tsv +0 -8
  13. bella_companion/eucovid/data/msa.fasta +0 -79500
  14. bella_companion/eucovid/data/osi.tsv +0 -376
  15. bella_companion/eucovid/data/predictors/all/closedborders_7e_nt.tsv +0 -35
  16. bella_companion/eucovid/data/predictors/all/dist_7e_ls.tsv +0 -35
  17. bella_companion/eucovid/data/predictors/all/flight_7e_ls.tsv +0 -35
  18. bella_companion/eucovid/data/predictors/all/flight_pop_x_7e_ls.tsv +0 -35
  19. bella_companion/eucovid/data/predictors/all/osi_x_7e_ls.tsv +0 -35
  20. bella_companion/eucovid/data/predictors/all/osi_y_7e_ls.tsv +0 -35
  21. bella_companion/eucovid/data/predictors/all/pop_x_7e_ls.tsv +0 -35
  22. bella_companion/eucovid/data/predictors/all/pop_y_7e_ls.tsv +0 -35
  23. bella_companion/eucovid/data/predictors/all/sharedborders_7e_nt.tsv +0 -35
  24. bella_companion/eucovid/data/predictors/changetimes_all_7e.tsv +0 -6
  25. bella_companion/eucovid/data/predictors/changetimes_flights_4e.tsv +0 -3
  26. bella_companion/eucovid/data/predictors/flight_pop_x_4e_ls.tsv +0 -20
  27. bella_companion/platyrrhine/beast_config.xml +0 -117
  28. bella_companion/platyrrhine/data/change_times.csv +0 -12
  29. bella_companion/platyrrhine/data/traits.csv +0 -122
  30. bella_companion/platyrrhine/data/trees.nwk +0 -100
  31. bella_companion/simulations/beast_configs/epi-multitype/GLM.xml +0 -81
  32. bella_companion/simulations/beast_configs/epi-multitype/MLP.xml +0 -81
  33. bella_companion/simulations/beast_configs/epi-multitype/Nonparametric.xml +0 -65
  34. bella_companion/simulations/beast_configs/epi-skyline/GLM.xml +0 -71
  35. bella_companion/simulations/beast_configs/epi-skyline/MLP.xml +0 -73
  36. bella_companion/simulations/beast_configs/epi-skyline/Nonparametric.xml +0 -57
  37. bella_companion/simulations/beast_configs/fbd-2traits/GLM.xml +0 -101
  38. bella_companion/simulations/beast_configs/fbd-2traits/MLP.xml +0 -98
  39. bella_companion/simulations/beast_configs/fbd-2traits/Nonparametric.xml +0 -70
  40. bella_companion/simulations/beast_configs/fbd-no-traits/GLM.xml +0 -88
  41. bella_companion/simulations/beast_configs/fbd-no-traits/MLP.xml +0 -86
  42. bella_companion/simulations/beast_configs/fbd-no-traits/Nonparametric.xml +0 -62
  43. bella_companion-0.0.29.dist-info/METADATA +0 -16
  44. bella_companion-0.0.29.dist-info/RECORD +0 -75
  45. bella_companion-0.0.29.dist-info/entry_points.txt +0 -3

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