batoolset 0.1.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- batoolset/GUI/__init__.py +0 -0
- batoolset/GUI/list_gui.py +513 -0
- batoolset/GUI/multi_image_display.py +989 -0
- batoolset/GUI/open.py +325 -0
- batoolset/GUI/overlay_hints.py +45 -0
- batoolset/GUI/paint2.py +1345 -0
- batoolset/GUI/scrollablepaint.py +1152 -0
- batoolset/IJ_ROIs/__init__.py +0 -0
- batoolset/IJ_ROIs/tools.py +40 -0
- batoolset/PATH/__init__.py +0 -0
- batoolset/PATH/tools.py +79 -0
- batoolset/SQLite_tools/__init__.py +0 -0
- batoolset/SQLite_tools/tools.py +840 -0
- batoolset/__init__.py +0 -0
- batoolset/binary/__init__.py +0 -0
- batoolset/binary/tools.py +123 -0
- batoolset/binarytools/__init__.py +0 -0
- batoolset/binarytools/cell_center_detector.py +290 -0
- batoolset/clipboard_tools/__init__.py +0 -0
- batoolset/clipboard_tools/tools.py +7 -0
- batoolset/colors/__init__.py +0 -0
- batoolset/colors/colorgen.py +193 -0
- batoolset/colors/tools.py +22 -0
- batoolset/command_line/__init__.py +0 -0
- batoolset/command_line/tools.py +18 -0
- batoolset/dialogs/__init__.py +0 -0
- batoolset/dialogs/opensave.py +228 -0
- batoolset/dicts/__init__.py +0 -0
- batoolset/dicts/tools.py +299 -0
- batoolset/dims/__init__.py +0 -0
- batoolset/dims/tools.py +83 -0
- batoolset/draw/__init__.py +0 -0
- batoolset/draw/shapes/Position.py +183 -0
- batoolset/draw/shapes/__init__.py +0 -0
- batoolset/draw/shapes/automated_alignment_drawing_refactored.py +346 -0
- batoolset/draw/shapes/circle2d.py +99 -0
- batoolset/draw/shapes/compute_optimal_size_all_merged.py +317 -0
- batoolset/draw/shapes/ellipse2d.py +336 -0
- batoolset/draw/shapes/freehand2d.py +235 -0
- batoolset/draw/shapes/group.py +1830 -0
- batoolset/draw/shapes/image2d.py +2469 -0
- batoolset/draw/shapes/line2d.py +575 -0
- batoolset/draw/shapes/point2d.py +257 -0
- batoolset/draw/shapes/polygon2d.py +357 -0
- batoolset/draw/shapes/polyline2d.py +235 -0
- batoolset/draw/shapes/rect2d.py +388 -0
- batoolset/draw/shapes/rectangle2d.py +601 -0
- batoolset/draw/shapes/scalebar.py +304 -0
- batoolset/draw/shapes/serializablefont.py +126 -0
- batoolset/draw/shapes/serializableguiparams.py +10 -0
- batoolset/draw/shapes/square2d.py +103 -0
- batoolset/draw/shapes/textorientation.py +45 -0
- batoolset/draw/shapes/tools.py +467 -0
- batoolset/draw/shapes/transform2D.py +350 -0
- batoolset/draw/shapes/txt2d.py +550 -0
- batoolset/draw/widgets/__init__.py +0 -0
- batoolset/draw/widgets/col.py +343 -0
- batoolset/draw/widgets/image_group.py +248 -0
- batoolset/draw/widgets/image_organizer.py +96 -0
- batoolset/draw/widgets/paint.py +184 -0
- batoolset/draw/widgets/vectorial.py +257 -0
- batoolset/figure/__init__.py +0 -0
- batoolset/figure/alignment.py +814 -0
- batoolset/figure/column.py +1117 -0
- batoolset/figure/fig_tools.py +285 -0
- batoolset/figure/minimal_debugger_scale_etc.py +139 -0
- batoolset/figure/panel.py +697 -0
- batoolset/figure/row.py +852 -0
- batoolset/figure/user_selection.py +287 -0
- batoolset/files/__init__.py +0 -0
- batoolset/files/tools.py +1321 -0
- batoolset/images/__init__.py +0 -0
- batoolset/images/tools.py +81 -0
- batoolset/img.py +5216 -0
- batoolset/linux/__init__.py +0 -0
- batoolset/linux/tools.py +72 -0
- batoolset/lists/__init__.py +0 -0
- batoolset/lists/tools.py +436 -0
- batoolset/luts/__init__.py +0 -0
- batoolset/luts/lut_minimal_test.py +1207 -0
- batoolset/matplolib/__init__.py +0 -0
- batoolset/matplolib/tools.py +44 -0
- batoolset/np_tools/__init__.py +0 -0
- batoolset/np_tools/tools.py +252 -0
- batoolset/np_tools/trash.py +15 -0
- batoolset/pandas_tools/__init__.py +0 -0
- batoolset/pandas_tools/tools.py +880 -0
- batoolset/partials/__init__.py +0 -0
- batoolset/partials/tools.py +83 -0
- batoolset/plot_tools/__init__.py +0 -0
- batoolset/plot_tools/tools.py +70 -0
- batoolset/pyqt/__init__.py +0 -0
- batoolset/pyqt/tools.py +691 -0
- batoolset/re_tools/__init__.py +0 -0
- batoolset/re_tools/tools.py +35 -0
- batoolset/serialization/__init__.py +0 -0
- batoolset/serialization/tools.py +1192 -0
- batoolset/sets/__init__.py +0 -0
- batoolset/sets/tools.py +109 -0
- batoolset/settings/__init__.py +0 -0
- batoolset/settings/global_settings.py +134 -0
- batoolset/strings/__init__.py +0 -0
- batoolset/strings/tools.py +225 -0
- batoolset/ta/__init__.py +0 -0
- batoolset/ta/database/__init__.py +0 -0
- batoolset/ta/database/advanced_sql_plotter.py +1170 -0
- batoolset/ta/database/my_qt_table.py +79 -0
- batoolset/ta/database/preview_and_edit_sqlite_db.py +405 -0
- batoolset/ta/database/sql.py +2141 -0
- batoolset/ta/database/sql_column_name_dialog.py +122 -0
- batoolset/ta/measurements/TAmeasures.py +2226 -0
- batoolset/ta/measurements/__init__.py +0 -0
- batoolset/ta/measurements/measurements3D/__init__.py +0 -0
- batoolset/ta/measurements/measurements3D/get_point_on_surface_if_centroid_is_bad.py +175 -0
- batoolset/ta/measurements/measurements3D/height_map_to_projection.py +82 -0
- batoolset/ta/measurements/measurements3D/measures3D.py +208 -0
- batoolset/ta/measurements/measurements3D/triangulate.py +331 -0
- batoolset/ta/measurements/nematic.py +562 -0
- batoolset/ta/measurements/nematic_measurements.py +107 -0
- batoolset/ta/segmentation/__init__.py +0 -0
- batoolset/ta/segmentation/neo_wshed.py +314 -0
- batoolset/ta/selections/__init__.py +0 -0
- batoolset/ta/selections/selection.py +329 -0
- batoolset/ta/tracking/__init__.py +0 -0
- batoolset/ta/tracking/last_tracking_based_on_matching_or_on_translation_from_mermaid_warp.py +653 -0
- batoolset/ta/tracking/local_to_track_correspondance.py +138 -0
- batoolset/ta/tracking/rapid_detection_of_vertices.py +517 -0
- batoolset/ta/tracking/registration.py +108 -0
- batoolset/ta/tracking/swap_detector_and_fixer.py +296 -0
- batoolset/ta/tracking/track_correction.py +238 -0
- batoolset/ta/tracking/tracking_error_detector_and_fixer.py +3099 -0
- batoolset/ta/tracking/tracking_yet_another_approach_pyramidal_registration_n_neo_swapping_correction.py +725 -0
- batoolset/ta/utils/TA_tools.py +43 -0
- batoolset/ta/utils/__init__.py +0 -0
- batoolset/ta/utils/rps_tools.py +1783 -0
- batoolset/tests/__init__.py +0 -0
- batoolset/tests/rps_tools.py +51 -0
- batoolset/tests/tools.py +10 -0
- batoolset/tools/__init__.py +0 -0
- batoolset/tools/early_stopper_class.py +9 -0
- batoolset/tools/guided_data_recoverer.py +110 -0
- batoolset/tools/logger.py +100 -0
- batoolset/tools/mytimer.py +31 -0
- batoolset/tools/prompt_color.py +160 -0
- batoolset/tools/qthandler.py +118 -0
- batoolset/uitools/__init__.py +0 -0
- batoolset/uitools/blinker.py +56 -0
- batoolset/unsafe/__init__.py +0 -0
- batoolset/unsafe/tools.py +115 -0
- batoolset/utils/__init__.py +0 -0
- batoolset/utils/commontools.py +158 -0
- batoolset/utils/loadlist.py +728 -0
- batoolset/version.py +10 -0
- batoolset/xml/__init__.py +0 -0
- batoolset/xml/tools.py +65 -0
- batoolset/zip_tools/__init__.py +0 -0
- batoolset/zip_tools/tools.py +76 -0
- batoolset-0.1.0.dist-info/LICENSE +24 -0
- batoolset-0.1.0.dist-info/METADATA +45 -0
- batoolset-0.1.0.dist-info/RECORD +162 -0
- batoolset-0.1.0.dist-info/WHEEL +5 -0
- batoolset-0.1.0.dist-info/top_level.txt +1 -0
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from functools import partial
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def dummy():
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print('test')
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def dummy2():
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print('test2')
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def get_method_name(partial_func):
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"""
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Returns the name of the wrapped function in a partial object.
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Args:
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partial_func (functools.partial): The partial object.
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Returns:
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str: The name of the wrapped function.
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Examples:
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>>> tst = partial(dummy)
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>>> print(get_method_name(tst))
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'dummy'
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"""
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return partial_func.func.__name__
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def is_partial(func):
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"""
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Checks if an object is a partial object.
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Args:
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func: The object to check.
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Returns:
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bool: True if the object is a partial object, False otherwise.
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Examples:
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>>> tst = partial(dummy)
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>>> print(is_partial(tst))
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True
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"""
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return isinstance(func, partial)
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def are_function_names_matching(func1, func2):
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"""
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Compares the names of two function objects or partial objects and returns True if they match, False otherwise.
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Args:
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func1: The first function object or partial object.
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func2: The second function object or partial object.
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Returns:
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bool: True if the names match, False otherwise.
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Examples:
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>>> print(are_function_names_matching(dummy, dummy2))
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False
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>>> print(are_function_names_matching(dummy, dummy))
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True
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>>> tst = partial(dummy)
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>>> print(are_function_names_matching(tst, dummy))
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True
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"""
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if is_partial(func1):
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func1 = get_method_name(func1)
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else:
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func1 = func1.__name__
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if is_partial(func2):
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func2 = get_method_name(func2)
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else:
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func2 = func2.__name__
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return func1 == func2
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tst = partial(dummy)
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print('is partial:', is_partial(tst))
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print('get method name:', get_method_name(tst))
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print('are function names matching:', are_function_names_matching(dummy, dummy2))
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print('are function names matching:', are_function_names_matching(dummy, dummy))
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print('are function names matching:', are_function_names_matching(tst, dummy))
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import random
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import matplotlib.pyplot as plt
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import numpy as np
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def plot_image_with_pixels(image, cmap='gray'):
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'''
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Plots an image with white lines surrounding each pixel. NB: This only make sense for small images
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image (numpy.ndarray): The input image array.
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cmap (str, optional): The colormap to use for displaying the image. Defaults to 'gray'.
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matplotlib.figure.Figure: The figure object containing the plotted image.
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# Examples:
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# >>> image = np.random.rand(10, 10)
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# >>> fig = plot_image_with_pixels(image)
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# >>> plt.show()
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'''
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# Create a new figure and axes
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fig, ax = plt.subplots()
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# Show the image using imshow()
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ax.imshow(image, cmap=cmap, interpolation=None)
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# Set the tick locations to center the ticks at the pixels
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ax.set_xticks(np.arange(image.shape[1]), minor=False)
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ax.set_yticks(np.arange(image.shape[0]), minor=False)
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# Shift the grid by 0.5 to surround the pixels
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ax.set_xticks(np.arange(image.shape[1]+1)-0.5, minor=True)
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ax.set_yticks(np.arange(image.shape[0]+1)-0.5, minor=True)
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# If the image is too large, hide the tick labels
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if image.shape[0] > 50:
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ax.set_yticklabels([])
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if image.shape[1] > 50:
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ax.set_xticklabels([])
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# Add the lines around each pixel using grid()
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ax.grid(which='minor', color='white', linestyle='-', linewidth=1)
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# Return the figure object
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return fig
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if __name__ == '__main__':
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if True:
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# Generate a random image of a random type
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image = random.choice([np.random.rand(10, 10), np.random.rand(100, 10, 3)])
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# Plot the image with white lines surrounding each pixel
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fig = plot_image_with_pixels(image)
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# Show the plot
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plt.show()
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if True:
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from batoolset.img import pop, Img
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img = Img('/E/Sample_images/sample_images_FIJI/AuPbSn40.jpg')
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pop(img)
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# sys.exit(0)
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