array-split 0.6.5__zip
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- array_split-0.6.5/LICENSE.txt +16 -0
- array_split-0.6.5/PKG-INFO +255 -0
- array_split-0.6.5/README.rst +221 -0
- array_split-0.6.5/array_split/__init__.py +81 -0
- array_split-0.6.5/array_split/_version.py +21 -0
- array_split-0.6.5/array_split/copyright.txt +1 -0
- array_split-0.6.5/array_split/license.py +83 -0
- array_split-0.6.5/array_split/license.txt +14 -0
- array_split-0.6.5/array_split/logging.py +242 -0
- array_split-0.6.5/array_split/split.py +1647 -0
- array_split-0.6.5/array_split/split_plot.py +43 -0
- array_split-0.6.5/array_split/split_test.py +1517 -0
- array_split-0.6.5/array_split/tests.py +147 -0
- array_split-0.6.5/array_split/unittest.py +352 -0
- array_split-0.6.5/array_split.egg-info/PKG-INFO +255 -0
- array_split-0.6.5/array_split.egg-info/SOURCES.txt +22 -0
- array_split-0.6.5/array_split.egg-info/dependency_links.txt +1 -0
- array_split-0.6.5/array_split.egg-info/not-zip-safe +1 -0
- array_split-0.6.5/array_split.egg-info/requires.txt +1 -0
- array_split-0.6.5/array_split.egg-info/top_level.txt +1 -0
- array_split-0.6.5/pyproject.toml +48 -0
- array_split-0.6.5/setup.cfg +16 -0
- array_split-0.6.5/setup.py +14 -0
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"""
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========================================
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The :mod:`array_split.split_test` Module
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========================================
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.. currentmodule:: array_split.split_test
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Module defining :mod:`array_split.split` unit-tests.
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Execute as::
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python -m array_split.split_tests
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Classes
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=======
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.. autosummary::
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:toctree: generated/
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:template: autosummary/inherits_TestCase_class.rst
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SplitTest - :obj:`unittest.TestCase` for :mod:`array_split.split` functions.
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"""
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from __future__ import absolute_import
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import array_split as _array_split
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import numpy as _np
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from .license import license as _license, copyright as _copyright, version as _version
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from . import unittest as _unittest
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from . import logging as _logging
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from .split import ShapeSplitter, array_split, shape_split
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from .split import calculate_num_slices_per_axis, shape_factors
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from .split import calculate_tile_shape_for_max_bytes, pad_with_object, convert_halo_to_array_form
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from .split import ARRAY_BOUNDS, NO_BOUNDS
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__author__ = "Shane J. Latham"
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__license__ = _license()
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__copyright__ = _copyright()
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__version__ = _version()
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class SplitTest(_unittest.TestCase):
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"""
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Tests for :mod:`array_split.split` module.
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"""
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#: Class attribute for :obj:`logging.Logger` logging.
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logger = _logging.getLogger(__name__ + ".SplitTest")
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def test_properties(self):
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"""
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Test :attr:`array_split.split.ARRAY_BOUNDS`
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and :attr:`array_split.split.NO_BOUNDS`.
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"""
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self.assertNotEqual(None, _array_split.split.ARRAY_BOUNDS)
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self.assertNotEqual(None, _array_split.split.NO_BOUNDS)
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def test_pad_with_object(self):
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"""
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Tests :func:`array_split.split.pad_with_object`.
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"""
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lst = pad_with_object([1, 3, 4, ], 5, obj=1)
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self.assertSequenceEqual([1, 3, 4, 1, 1], lst)
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self.assertRaises(ValueError, pad_with_object, [1, 2, 3, 4], 3)
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def test_convert_halo_to_array_form(self):
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"""
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Tests :func:`array_split.split.convert_halo_to_array_form`.
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"""
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self.assertRaises(
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ValueError,
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convert_halo_to_array_form,
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halo=[0, 2, 4],
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ndim=2
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)
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self.assertRaises(
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ValueError,
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convert_halo_to_array_form,
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halo=[0, 2, 4],
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ndim=4
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)
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self.assertTrue(
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_np.all(
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convert_halo_to_array_form(1, 4)
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==
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[[1, 1], [1, 1], [1, 1], [1, 1]]
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)
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)
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self.assertTrue(
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_np.all(
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convert_halo_to_array_form([1, 2, 3, 4], 4)
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==
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[[1, 1], [2, 2], [3, 3], [4, 4]]
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)
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)
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self.assertTrue(
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_np.all(
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convert_halo_to_array_form([[1, 2], [3, 4], [5, 6], [7, 8]], 4)
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==
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[[1, 2], [3, 4], [5, 6], [7, 8]]
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)
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)
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def test_shape_factors(self):
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"""
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Tests for :func:`array_split.split.shape_factors`.
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"""
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f = shape_factors(4, 2)
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self.assertTrue(_np.all(f == 2))
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f = shape_factors(4, 1)
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self.assertTrue(_np.all(f == 4))
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f = shape_factors(5, 2)
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self.assertTrue(_np.all(f == [1, 5]))
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f = shape_factors(6, 2)
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self.assertTrue(_np.all(f == [2, 3]))
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f = shape_factors(6, 3)
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self.assertTrue(_np.all(f == [1, 2, 3]))
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def test_calculate_num_slices_per_axis(self):
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"""
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Tests for :func:`array_split.split.calculate_num_slices_per_axis`.
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"""
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self.assertRaises(
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ValueError,
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calculate_num_slices_per_axis,
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[0, 1, 0],
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15,
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[1, 0, 1024]
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)
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spa = calculate_num_slices_per_axis([0, ], 5)
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self.assertEqual(1, len(spa))
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self.assertTrue(_np.all(spa == 5))
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spa = calculate_num_slices_per_axis([2, 0], 4)
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self.assertEqual(2, len(spa))
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self.assertTrue(_np.all(spa == 2))
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spa = calculate_num_slices_per_axis([0, 2], 4)
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self.assertEqual(2, len(spa))
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self.assertTrue(_np.all(spa == 2))
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spa = calculate_num_slices_per_axis([0, 0], 4)
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self.assertEqual(2, len(spa))
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self.assertTrue(_np.all(spa == 2))
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spa = calculate_num_slices_per_axis([0, 0], 16)
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self.assertEqual(2, len(spa))
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self.assertTrue(_np.all(spa == 4))
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spa = calculate_num_slices_per_axis([0, 0, 0], 8)
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self.assertEqual(3, len(spa))
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self.assertTrue(_np.all(spa == 2))
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spa = calculate_num_slices_per_axis([0, 1, 0], 8)
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self.assertEqual(3, len(spa))
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self.assertTrue(_np.all(spa == [4, 1, 2]))
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spa = calculate_num_slices_per_axis([0, 1, 0], 17)
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self.assertEqual(3, len(spa))
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self.assertTrue(_np.all(spa == [17, 1, 1]))
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spa = calculate_num_slices_per_axis([0, 1, 0], 15, [1, _np.inf, _np.inf])
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self.assertEqual(3, len(spa))
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self.assertTrue(_np.all(spa == [1, 1, 15]))
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spa = calculate_num_slices_per_axis([0, 1, 0], 16, [1, _np.inf, _np.inf])
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self.assertEqual(3, len(spa))
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self.assertTrue(_np.all(spa == [1, 1, 16]))
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spa = calculate_num_slices_per_axis([0, 0, 0], 64, [1, 2, _np.inf])
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self.assertEqual(3, len(spa))
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self.assertTrue(_np.all(spa == [1, 2, 32]))
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spa = calculate_num_slices_per_axis([0, 0, 0], 64, [_np.inf, 1, 2])
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self.assertEqual(3, len(spa))
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self.assertSequenceEqual([32, 1, 2], spa.tolist())
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spa = calculate_num_slices_per_axis([0, 0, 0], 27, [_np.inf, 2, 2])
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self.assertEqual(3, len(spa))
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self.assertSequenceEqual([27, 1, 1], spa.tolist())
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def test_calculate_tile_shape_for_max_bytes_1d(self):
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"""
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Test case for :func:`array_split.split.calculate_tile_shape_for_max_bytes`,
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where :samp:`array_shape` parameter is 1D, i.e. of the form :samp:`(N,)`.
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"""
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self.assertRaises(
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ValueError,
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calculate_tile_shape_for_max_bytes,
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array_shape=(512, 1024, 1024),
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array_itemsize=1,
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max_tile_bytes=2**20,
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sub_tile_shape=(1024, 128, 128)
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)
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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array_shape=(512,),
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array_itemsize=1,
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max_tile_bytes=1024
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)
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self.assertSequenceEqual((512,), tile_shape)
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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array_shape=(512,),
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array_itemsize=1,
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max_tile_bytes=1024,
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sub_tile_shape=[64, ]
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)
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self.assertSequenceEqual((512,), tile_shape)
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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array_shape=(512,),
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array_itemsize=1,
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max_tile_bytes=1024,
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sub_tile_shape=[26, ]
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)
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self.assertSequenceEqual((260,), tile_shape)
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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array_shape=(512,),
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array_itemsize=1,
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max_tile_bytes=512
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)
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self.assertSequenceEqual((512,), tile_shape)
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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array_shape=(512,),
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array_itemsize=2,
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max_tile_bytes=512,
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)
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self.assertSequenceEqual((256,), tile_shape)
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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array_shape=(512,),
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array_itemsize=2,
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max_tile_bytes=512,
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sub_tile_shape=[32, ]
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)
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self.assertSequenceEqual((256,), tile_shape)
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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array_shape=(512,),
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array_itemsize=2,
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max_tile_bytes=512,
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sub_tile_shape=[60, ]
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)
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self.assertSequenceEqual((180,), tile_shape)
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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array_shape=(512,),
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array_itemsize=1,
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max_tile_bytes=512,
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halo=1
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)
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self.assertSequenceEqual((256,), tile_shape)
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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array_shape=(512,),
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array_itemsize=1,
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max_tile_bytes=514,
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halo=1
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)
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self.assertSequenceEqual((512,), tile_shape)
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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array_shape=(512,),
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array_itemsize=2,
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max_tile_bytes=511
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)
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self.assertSequenceEqual((171,), tile_shape)
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def test_calculate_tile_shape_for_max_bytes_2d(self):
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"""
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Test case for :func:`array_split.split.calculate_tile_shape_for_max_bytes`,
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where :samp:`array_shape` parameter is 2D, i.e. of the form :samp:`(H,W)`.
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"""
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tile_shape = \
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calculate_tile_shape_for_max_bytes(
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|
301
|
+
array_shape=(512, 512),
|
|
302
|
+
array_itemsize=1,
|
|
303
|
+
max_tile_bytes=512 ** 2
|
|
304
|
+
)
|
|
305
|
+
self.assertSequenceEqual((512, 512), tile_shape.tolist())
|
|
306
|
+
|
|
307
|
+
tile_shape = \
|
|
308
|
+
calculate_tile_shape_for_max_bytes(
|
|
309
|
+
array_shape=(512, 512),
|
|
310
|
+
array_itemsize=1,
|
|
311
|
+
max_tile_bytes=512 ** 2 - 1
|
|
312
|
+
)
|
|
313
|
+
self.assertSequenceEqual((256, 512), tile_shape.tolist())
|
|
314
|
+
|
|
315
|
+
tile_shape = \
|
|
316
|
+
calculate_tile_shape_for_max_bytes(
|
|
317
|
+
array_shape=(513, 512),
|
|
318
|
+
array_itemsize=1,
|
|
319
|
+
max_tile_bytes=512 ** 2 - 1
|
|
320
|
+
)
|
|
321
|
+
self.assertSequenceEqual((257, 512), tile_shape.tolist())
|
|
322
|
+
|
|
323
|
+
tile_shape = \
|
|
324
|
+
calculate_tile_shape_for_max_bytes(
|
|
325
|
+
array_shape=(512, 512),
|
|
326
|
+
array_itemsize=1,
|
|
327
|
+
max_tile_bytes=512 ** 2 // 2
|
|
328
|
+
)
|
|
329
|
+
self.assertSequenceEqual((256, 512), tile_shape.tolist())
|
|
330
|
+
|
|
331
|
+
tile_shape = \
|
|
332
|
+
calculate_tile_shape_for_max_bytes(
|
|
333
|
+
array_shape=(512, 512),
|
|
334
|
+
array_itemsize=2,
|
|
335
|
+
max_tile_bytes=512 ** 2 // 2
|
|
336
|
+
)
|
|
337
|
+
self.assertSequenceEqual((128, 512), tile_shape.tolist())
|
|
338
|
+
|
|
339
|
+
tile_shape = \
|
|
340
|
+
calculate_tile_shape_for_max_bytes(
|
|
341
|
+
array_shape=(512, 512),
|
|
342
|
+
array_itemsize=2,
|
|
343
|
+
max_tile_bytes=512 ** 2 // 2,
|
|
344
|
+
sub_tile_shape=(32, 64)
|
|
345
|
+
)
|
|
346
|
+
self.assertSequenceEqual((128, 512), tile_shape.tolist())
|
|
347
|
+
|
|
348
|
+
tile_shape = \
|
|
349
|
+
calculate_tile_shape_for_max_bytes(
|
|
350
|
+
array_shape=(512, 512),
|
|
351
|
+
array_itemsize=1,
|
|
352
|
+
max_tile_bytes=512 ** 2 // 2,
|
|
353
|
+
sub_tile_shape=(30, 64)
|
|
354
|
+
)
|
|
355
|
+
self.assertSequenceEqual((180, 512), tile_shape.tolist())
|
|
356
|
+
|
|
357
|
+
tile_shape = \
|
|
358
|
+
calculate_tile_shape_for_max_bytes(
|
|
359
|
+
array_shape=(512, 512),
|
|
360
|
+
array_itemsize=2,
|
|
361
|
+
max_tile_bytes=512 ** 2 // 2,
|
|
362
|
+
sub_tile_shape=(30, 64)
|
|
363
|
+
)
|
|
364
|
+
self.assertSequenceEqual((120, 512), tile_shape.tolist())
|
|
365
|
+
|
|
366
|
+
tile_shape = \
|
|
367
|
+
calculate_tile_shape_for_max_bytes(
|
|
368
|
+
array_shape=(512, 1024),
|
|
369
|
+
array_itemsize=1,
|
|
370
|
+
max_tile_bytes=512 ** 2,
|
|
371
|
+
sub_tile_shape=(30, 60)
|
|
372
|
+
)
|
|
373
|
+
self.assertSequenceEqual((180, 540), tile_shape.tolist())
|
|
374
|
+
|
|
375
|
+
tile_shape = \
|
|
376
|
+
calculate_tile_shape_for_max_bytes(
|
|
377
|
+
array_shape=(512, 32),
|
|
378
|
+
array_itemsize=1,
|
|
379
|
+
max_tile_bytes=2 * 32 * 32,
|
|
380
|
+
sub_tile_shape=(32, 32)
|
|
381
|
+
)
|
|
382
|
+
self.assertSequenceEqual((64, 32), tile_shape.tolist())
|
|
383
|
+
|
|
384
|
+
tile_shape = \
|
|
385
|
+
calculate_tile_shape_for_max_bytes(
|
|
386
|
+
array_shape=(32, 512),
|
|
387
|
+
array_itemsize=1,
|
|
388
|
+
max_tile_bytes=2 * 32 * 32,
|
|
389
|
+
sub_tile_shape=(32, 32)
|
|
390
|
+
)
|
|
391
|
+
self.assertSequenceEqual((32, 64), tile_shape.tolist())
|
|
392
|
+
|
|
393
|
+
def test_multiple_parameter_groups_error(self):
|
|
394
|
+
"""
|
|
395
|
+
Test for case for inconsistent parameter group arguments.
|
|
396
|
+
"""
|
|
397
|
+
|
|
398
|
+
splitter = ShapeSplitter((100, ), axis=(3,), max_tile_bytes=30)
|
|
399
|
+
self.assertRaises(
|
|
400
|
+
ValueError,
|
|
401
|
+
splitter.calculate_split
|
|
402
|
+
)
|
|
403
|
+
|
|
404
|
+
splitter = ShapeSplitter((100, ))
|
|
405
|
+
self.assertRaises(
|
|
406
|
+
ValueError,
|
|
407
|
+
splitter.calculate_split
|
|
408
|
+
)
|
|
409
|
+
|
|
410
|
+
self.assertRaises(
|
|
411
|
+
ValueError,
|
|
412
|
+
splitter.set_split_extents_by_indices_per_axis
|
|
413
|
+
)
|
|
414
|
+
|
|
415
|
+
def test_array_split(self):
|
|
416
|
+
"""
|
|
417
|
+
Test for case for :func:`array_split.split.array_split`.
|
|
418
|
+
"""
|
|
419
|
+
x = _np.arange(9.0)
|
|
420
|
+
self.assertArraySplitEqual(
|
|
421
|
+
_np.array_split(x, 3),
|
|
422
|
+
array_split(x, 3)
|
|
423
|
+
)
|
|
424
|
+
self.assertArraySplitEqual(
|
|
425
|
+
_np.array_split(x, 4),
|
|
426
|
+
array_split(x, 4)
|
|
427
|
+
)
|
|
428
|
+
idx = [2, 3, 5, ]
|
|
429
|
+
self.assertArraySplitEqual(
|
|
430
|
+
_np.array_split(x, idx),
|
|
431
|
+
array_split(x, idx)
|
|
432
|
+
)
|
|
433
|
+
|
|
434
|
+
x = _np.arange(32)
|
|
435
|
+
x = x.reshape((4, 8))
|
|
436
|
+
self.logger.info("_np.array_split(x, 3, axis=0) = \n%s", _np.array_split(x, 3, axis=0))
|
|
437
|
+
self.logger.info(
|
|
438
|
+
"array_split.split.array_split(x, 3, axis=0) = \n%s", array_split(x, 3, axis=0)
|
|
439
|
+
)
|
|
440
|
+
self.assertArraySplitEqual(
|
|
441
|
+
_np.array_split(x, 3, axis=0),
|
|
442
|
+
array_split(x, 3, axis=0)
|
|
443
|
+
)
|
|
444
|
+
|
|
445
|
+
self.logger.info("_np.array_split(x, 3, axis=1) = \n%s", _np.array_split(x, 3, axis=1))
|
|
446
|
+
self.logger.info(
|
|
447
|
+
"array_split.split.array_split(x, 3, axis=1) = \n%s", array_split(x, 3, axis=1)
|
|
448
|
+
)
|
|
449
|
+
self.assertArraySplitEqual(
|
|
450
|
+
_np.array_split(x, 3, axis=1),
|
|
451
|
+
array_split(x, 3, axis=1)
|
|
452
|
+
)
|
|
453
|
+
|
|
454
|
+
self.logger.info("_np.array_split(x, 8, axis=0) = \n%s", _np.array_split(x, 8, axis=0))
|
|
455
|
+
self.assertArraySplitEqual(
|
|
456
|
+
_np.array_split(x, 8, axis=0),
|
|
457
|
+
array_split(x, 8, axis=0)
|
|
458
|
+
)
|
|
459
|
+
|
|
460
|
+
x = _np.arange(0, 64)
|
|
461
|
+
x = x.reshape((4, 16))
|
|
462
|
+
self.assertArraySplitEqual(
|
|
463
|
+
_np.array_split(x, [3, 8, 12], axis=1),
|
|
464
|
+
array_split(x, [3, 8, 12], axis=1)
|
|
465
|
+
)
|
|
466
|
+
|
|
467
|
+
x = _np.arange(0, 512, dtype="int16")
|
|
468
|
+
self.assertArraySplitEqual(
|
|
469
|
+
[_np.arange(0, 256), _np.arange(256, 512)],
|
|
470
|
+
array_split(x, max_tile_bytes=512)
|
|
471
|
+
)
|
|
472
|
+
|
|
473
|
+
def test_split_by_per_axis_indices(self):
|
|
474
|
+
"""
|
|
475
|
+
Test for case for splitting by specified
|
|
476
|
+
indices. For example::
|
|
477
|
+
|
|
478
|
+
ShapeSplitter(array_shape=(10, 4), indices_or_sections=[[2, 6, 8], ]).calculate_split()
|
|
479
|
+
|
|
480
|
+
"""
|
|
481
|
+
splitter = ShapeSplitter((10, 4), [[2, 6, 8], [1, ], [8, 4]])
|
|
482
|
+
self.assertRaises(
|
|
483
|
+
ValueError,
|
|
484
|
+
splitter.calculate_split
|
|
485
|
+
)
|
|
486
|
+
splitter = ShapeSplitter((10, 4), [[2, 6, 8], ])
|
|
487
|
+
split = splitter.calculate_split()
|
|
488
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
489
|
+
self.logger.info("split =\n%s", split)
|
|
490
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [4, 1]))
|
|
491
|
+
self.assertEqual(slice(0, 2), split[0, 0][0]) # axis 0 slice
|
|
492
|
+
self.assertEqual(slice(2, 6), split[1, 0][0]) # axis 0 slice
|
|
493
|
+
self.assertEqual(slice(6, 8), split[2, 0][0]) # axis 0 slice
|
|
494
|
+
self.assertEqual(slice(8, 10), split[3, 0][0]) # axis 0 slice
|
|
495
|
+
self.assertEqual(slice(0, 4), split[0, 0][1]) # axis 1 slice
|
|
496
|
+
self.assertEqual(slice(0, 4), split[1, 0][1]) # axis 1 slice
|
|
497
|
+
self.assertEqual(slice(0, 4), split[2, 0][1]) # axis 1 slice
|
|
498
|
+
self.assertEqual(slice(0, 4), split[3, 0][1]) # axis 1 slice
|
|
499
|
+
|
|
500
|
+
split1 = splitter.calculate_split_by_indices_per_axis()
|
|
501
|
+
self.assertTrue(_np.all(split == split1))
|
|
502
|
+
|
|
503
|
+
splitter = ShapeSplitter((10, 13), [None, [2, 5, 8], ])
|
|
504
|
+
split = splitter.calculate_split()
|
|
505
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
506
|
+
self.logger.info("split =\n%s", split)
|
|
507
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [1, 4]))
|
|
508
|
+
self.assertEqual(slice(0, 10), split[0, 0][0]) # axis 0 slice
|
|
509
|
+
self.assertEqual(slice(0, 10), split[0, 1][0]) # axis 0 slice
|
|
510
|
+
self.assertEqual(slice(0, 10), split[0, 2][0]) # axis 0 slice
|
|
511
|
+
self.assertEqual(slice(0, 10), split[0, 3][0]) # axis 0 slice
|
|
512
|
+
self.assertEqual(slice(0, 2), split[0, 0][1]) # axis 1 slice
|
|
513
|
+
self.assertEqual(slice(2, 5), split[0, 1][1]) # axis 1 slice
|
|
514
|
+
self.assertEqual(slice(5, 8), split[0, 2][1]) # axis 1 slice
|
|
515
|
+
self.assertEqual(slice(8, 13), split[0, 3][1]) # axis 1 slice
|
|
516
|
+
|
|
517
|
+
splitter = ShapeSplitter((10, 4), [[2, 6], [2, ]])
|
|
518
|
+
split = splitter.calculate_split()
|
|
519
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
520
|
+
self.logger.info("split =\n%s", split)
|
|
521
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [3, 2]))
|
|
522
|
+
self.assertEqual(slice(0, 2), split[0, 0][0]) # axis 0 slice
|
|
523
|
+
self.assertEqual(slice(2, 6), split[1, 0][0]) # axis 0 slice
|
|
524
|
+
self.assertEqual(slice(6, 10), split[2, 0][0]) # axis 0 slice
|
|
525
|
+
self.assertEqual(slice(0, 2), split[0, 1][0]) # axis 0 slice
|
|
526
|
+
self.assertEqual(slice(2, 6), split[1, 1][0]) # axis 0 slice
|
|
527
|
+
self.assertEqual(slice(6, 10), split[2, 1][0]) # axis 0 slice
|
|
528
|
+
|
|
529
|
+
self.assertEqual(slice(0, 2), split[0, 0][1]) # axis 1 slice
|
|
530
|
+
self.assertEqual(slice(0, 2), split[1, 0][1]) # axis 1 slice
|
|
531
|
+
self.assertEqual(slice(0, 2), split[2, 0][1]) # axis 1 slice
|
|
532
|
+
self.assertEqual(slice(2, 4), split[0, 1][1]) # axis 1 slice
|
|
533
|
+
self.assertEqual(slice(2, 4), split[1, 1][1]) # axis 1 slice
|
|
534
|
+
self.assertEqual(slice(2, 4), split[2, 1][1]) # axis 1 slice
|
|
535
|
+
|
|
536
|
+
splitter = ShapeSplitter((10,), [[2, 6, 8], ])
|
|
537
|
+
split = splitter.calculate_split()
|
|
538
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
539
|
+
self.logger.info("split =\n%s", split)
|
|
540
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [4, ]))
|
|
541
|
+
self.assertEqual(slice(0, 2), split[0][0]) # axis 0 slice
|
|
542
|
+
self.assertEqual(slice(2, 6), split[1][0]) # axis 0 slice
|
|
543
|
+
self.assertEqual(slice(6, 8), split[2][0]) # axis 0 slice
|
|
544
|
+
self.assertEqual(slice(8, 10), split[3][0]) # axis 0 slice
|
|
545
|
+
|
|
546
|
+
def test_split_by_num_slices_1d(self):
|
|
547
|
+
"""
|
|
548
|
+
Test for case for splitting by number of
|
|
549
|
+
slice elements. For example::
|
|
550
|
+
|
|
551
|
+
ShapeSplitter(array_shape=(10, ), indices_or_sections=3).calculate_split()
|
|
552
|
+
ShapeSplitter(array_shape=(10, ), axis=[2, ]).calculate_split()
|
|
553
|
+
|
|
554
|
+
"""
|
|
555
|
+
|
|
556
|
+
self.assertRaises(
|
|
557
|
+
ValueError,
|
|
558
|
+
ShapeSplitter,
|
|
559
|
+
(10,),
|
|
560
|
+
axis=[3, 4]
|
|
561
|
+
)
|
|
562
|
+
|
|
563
|
+
splitter = ShapeSplitter((10,), axis=[0, ])
|
|
564
|
+
self.assertRaises(
|
|
565
|
+
ValueError,
|
|
566
|
+
splitter.set_split_extents_by_split_size
|
|
567
|
+
)
|
|
568
|
+
|
|
569
|
+
splitter = ShapeSplitter((10,), axis=[2, ])
|
|
570
|
+
splitter.split_num_slices_per_axis = [2, 2]
|
|
571
|
+
self.assertRaises(
|
|
572
|
+
ValueError,
|
|
573
|
+
splitter.check_consistent_parameter_dimensions
|
|
574
|
+
)
|
|
575
|
+
|
|
576
|
+
splitter = ShapeSplitter((10,), 3)
|
|
577
|
+
split = splitter.calculate_split()
|
|
578
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
579
|
+
self.logger.info("split =\n%s", split)
|
|
580
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [3, ]))
|
|
581
|
+
self.assertEqual(slice(0, 4), split[0][0]) # axis 0 slice
|
|
582
|
+
self.assertEqual(slice(4, 7), split[1][0]) # axis 0 slice
|
|
583
|
+
self.assertEqual(slice(7, 10), split[2][0]) # axis 0 slice
|
|
584
|
+
|
|
585
|
+
split1 = splitter.calculate_split_by_split_size()
|
|
586
|
+
self.assertTrue(_np.all(split == split1))
|
|
587
|
+
|
|
588
|
+
splitter = ShapeSplitter((10,), axis=[3, ])
|
|
589
|
+
split = splitter.calculate_split()
|
|
590
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
591
|
+
self.logger.info("split =\n%s", split)
|
|
592
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [3, ]))
|
|
593
|
+
self.assertEqual(slice(0, 4), split[0][0]) # axis 0 slice
|
|
594
|
+
self.assertEqual(slice(4, 7), split[1][0]) # axis 0 slice
|
|
595
|
+
self.assertEqual(slice(7, 10), split[2][0]) # axis 0 slice
|
|
596
|
+
|
|
597
|
+
splitter = ShapeSplitter((10,), 3, axis=[3, ])
|
|
598
|
+
split = splitter.calculate_split()
|
|
599
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
600
|
+
self.logger.info("split =\n%s", split)
|
|
601
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [3, ]))
|
|
602
|
+
self.assertEqual(slice(0, 4), split[0][0]) # axis 0 slice
|
|
603
|
+
self.assertEqual(slice(4, 7), split[1][0]) # axis 0 slice
|
|
604
|
+
self.assertEqual(slice(7, 10), split[2][0]) # axis 0 slice
|
|
605
|
+
|
|
606
|
+
splitter = ShapeSplitter((10,), 3, axis=[0, ])
|
|
607
|
+
split = splitter.calculate_split()
|
|
608
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
609
|
+
self.logger.info("split =\n%s", split)
|
|
610
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [3, ]))
|
|
611
|
+
self.assertEqual(slice(0, 4), split[0][0]) # axis 0 slice
|
|
612
|
+
self.assertEqual(slice(4, 7), split[1][0]) # axis 0 slice
|
|
613
|
+
self.assertEqual(slice(7, 10), split[2][0]) # axis 0 slice
|
|
614
|
+
|
|
615
|
+
splitter = ShapeSplitter((10,), 2, axis=[0, ])
|
|
616
|
+
split = splitter.calculate_split()
|
|
617
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
618
|
+
self.logger.info("split =\n%s", split)
|
|
619
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [2, ]))
|
|
620
|
+
self.assertEqual(slice(0, 5), split[0][0]) # axis 0 slice
|
|
621
|
+
self.assertEqual(slice(5, 10), split[1][0]) # axis 0 slice
|
|
622
|
+
|
|
623
|
+
def test_split_by_num_slices_2d_non_0_axis_elems(self):
|
|
624
|
+
"""
|
|
625
|
+
Test for case for splitting by number of
|
|
626
|
+
slice elements. For example::
|
|
627
|
+
|
|
628
|
+
ShapeSplitter(array_shape=(10, 13), axis=[2, 3]).calculate_split()
|
|
629
|
+
|
|
630
|
+
"""
|
|
631
|
+
|
|
632
|
+
splitter = ShapeSplitter((10, 13), axis=[2, 2])
|
|
633
|
+
split = splitter.calculate_split()
|
|
634
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
635
|
+
self.logger.info("split =\n%s", split)
|
|
636
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [2, 2]))
|
|
637
|
+
self.assertEqual(slice(0, 5), split[0, 0][0]) # axis 0 slice
|
|
638
|
+
self.assertEqual(slice(0, 5), split[0, 1][0]) # axis 0 slice
|
|
639
|
+
self.assertEqual(slice(5, 10), split[1, 0][0]) # axis 0 slice
|
|
640
|
+
self.assertEqual(slice(5, 10), split[1, 1][0]) # axis 0 slice
|
|
641
|
+
self.assertEqual(slice(0, 7), split[0, 0][1]) # axis 1 slice
|
|
642
|
+
self.assertEqual(slice(7, 13), split[0, 1][1]) # axis 1 slice
|
|
643
|
+
self.assertEqual(slice(0, 7), split[1, 0][1]) # axis 1 slice
|
|
644
|
+
self.assertEqual(slice(7, 13), split[1, 1][1]) # axis 1 slice
|
|
645
|
+
|
|
646
|
+
splitter = ShapeSplitter((10, 13), 4, axis=[2, 2])
|
|
647
|
+
split = splitter.calculate_split()
|
|
648
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
649
|
+
self.logger.info("split =\n%s", split)
|
|
650
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [2, 2]))
|
|
651
|
+
self.assertEqual(slice(0, 5), split[0, 0][0]) # axis 0 slice
|
|
652
|
+
self.assertEqual(slice(0, 5), split[0, 1][0]) # axis 0 slice
|
|
653
|
+
self.assertEqual(slice(5, 10), split[1, 0][0]) # axis 0 slice
|
|
654
|
+
self.assertEqual(slice(5, 10), split[1, 1][0]) # axis 0 slice
|
|
655
|
+
self.assertEqual(slice(0, 7), split[0, 0][1]) # axis 1 slice
|
|
656
|
+
self.assertEqual(slice(7, 13), split[0, 1][1]) # axis 1 slice
|
|
657
|
+
self.assertEqual(slice(0, 7), split[1, 0][1]) # axis 1 slice
|
|
658
|
+
self.assertEqual(slice(7, 13), split[1, 1][1]) # axis 1 slice
|
|
659
|
+
|
|
660
|
+
def test_split_by_num_slices_2d_0_axis_elems(self):
|
|
661
|
+
"""
|
|
662
|
+
Test for case for splitting by number of
|
|
663
|
+
slice elements. For example::
|
|
664
|
+
|
|
665
|
+
ShapeSplitter(array_shape=(10, 13), 4, axis=[2, 0]).calculate_split()
|
|
666
|
+
|
|
667
|
+
"""
|
|
668
|
+
|
|
669
|
+
splitter = ShapeSplitter((10, 13), 4, axis=[1, 0])
|
|
670
|
+
split = splitter.calculate_split()
|
|
671
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
672
|
+
self.logger.info("split =\n%s", split)
|
|
673
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [1, 4]))
|
|
674
|
+
self.assertEqual(slice(0, 10), split[0, 0][0]) # axis 0 slice
|
|
675
|
+
self.assertEqual(slice(0, 10), split[0, 1][0]) # axis 0 slice
|
|
676
|
+
self.assertEqual(slice(0, 10), split[0, 2][0]) # axis 0 slice
|
|
677
|
+
self.assertEqual(slice(0, 10), split[0, 3][0]) # axis 0 slice
|
|
678
|
+
self.assertEqual(slice(0, 4), split[0, 0][1]) # axis 1 slice
|
|
679
|
+
self.assertEqual(slice(4, 7), split[0, 1][1]) # axis 1 slice
|
|
680
|
+
self.assertEqual(slice(7, 10), split[0, 2][1]) # axis 1 slice
|
|
681
|
+
self.assertEqual(slice(10, 13), split[0, 3][1]) # axis 1 slice
|
|
682
|
+
|
|
683
|
+
splitter = ShapeSplitter((10, 13), 4, axis=[0, 2])
|
|
684
|
+
split = splitter.calculate_split()
|
|
685
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
686
|
+
self.logger.info("split =\n%s", split)
|
|
687
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [2, 2]))
|
|
688
|
+
self.assertEqual(slice(0, 5), split[0, 0][0]) # axis 0 slice
|
|
689
|
+
self.assertEqual(slice(0, 5), split[0, 1][0]) # axis 0 slice
|
|
690
|
+
self.assertEqual(slice(5, 10), split[1, 0][0]) # axis 0 slice
|
|
691
|
+
self.assertEqual(slice(5, 10), split[1, 1][0]) # axis 0 slice
|
|
692
|
+
self.assertEqual(slice(0, 7), split[0, 0][1]) # axis 1 slice
|
|
693
|
+
self.assertEqual(slice(7, 13), split[0, 1][1]) # axis 1 slice
|
|
694
|
+
self.assertEqual(slice(0, 7), split[1, 0][1]) # axis 1 slice
|
|
695
|
+
self.assertEqual(slice(7, 13), split[1, 1][1]) # axis 1 slice
|
|
696
|
+
|
|
697
|
+
splitter = ShapeSplitter((10, 13), 4, axis=[2, 0])
|
|
698
|
+
split = splitter.calculate_split()
|
|
699
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
700
|
+
self.logger.info("split =\n%s", split)
|
|
701
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [2, 2]))
|
|
702
|
+
self.assertEqual(slice(0, 5), split[0, 0][0]) # axis 0 slice
|
|
703
|
+
self.assertEqual(slice(0, 5), split[0, 1][0]) # axis 0 slice
|
|
704
|
+
self.assertEqual(slice(5, 10), split[1, 0][0]) # axis 0 slice
|
|
705
|
+
self.assertEqual(slice(5, 10), split[1, 1][0]) # axis 0 slice
|
|
706
|
+
self.assertEqual(slice(0, 7), split[0, 0][1]) # axis 1 slice
|
|
707
|
+
self.assertEqual(slice(7, 13), split[0, 1][1]) # axis 1 slice
|
|
708
|
+
self.assertEqual(slice(0, 7), split[1, 0][1]) # axis 1 slice
|
|
709
|
+
self.assertEqual(slice(7, 13), split[1, 1][1]) # axis 1 slice
|
|
710
|
+
|
|
711
|
+
splitter = ShapeSplitter((10, 13), 4, axis=[0, 0])
|
|
712
|
+
split = splitter.calculate_split()
|
|
713
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
714
|
+
self.logger.info("split =\n%s", split)
|
|
715
|
+
self.assertTrue(_np.all(_np.array(split.shape) == [2, 2]))
|
|
716
|
+
self.assertEqual(slice(0, 5), split[0, 0][0]) # axis 0 slice
|
|
717
|
+
self.assertEqual(slice(0, 5), split[0, 1][0]) # axis 0 slice
|
|
718
|
+
self.assertEqual(slice(5, 10), split[1, 0][0]) # axis 0 slice
|
|
719
|
+
self.assertEqual(slice(5, 10), split[1, 1][0]) # axis 0 slice
|
|
720
|
+
self.assertEqual(slice(0, 7), split[0, 0][1]) # axis 1 slice
|
|
721
|
+
self.assertEqual(slice(7, 13), split[0, 1][1]) # axis 1 slice
|
|
722
|
+
self.assertEqual(slice(0, 7), split[1, 0][1]) # axis 1 slice
|
|
723
|
+
self.assertEqual(slice(7, 13), split[1, 1][1]) # axis 1 slice
|
|
724
|
+
|
|
725
|
+
def test_calculate_split_by_tile_shape_1d(self):
|
|
726
|
+
"""
|
|
727
|
+
Test for case for splitting by explicit tile shape. For example::
|
|
728
|
+
|
|
729
|
+
ShapeSplitter(array_shape=(10, ), tile_shape=(3, )).calculate_split()
|
|
730
|
+
|
|
731
|
+
"""
|
|
732
|
+
|
|
733
|
+
splitter = ShapeSplitter((10, ), tile_shape=(3, 3))
|
|
734
|
+
self.assertRaises(
|
|
735
|
+
ValueError,
|
|
736
|
+
splitter.calculate_split
|
|
737
|
+
)
|
|
738
|
+
|
|
739
|
+
splitter = ShapeSplitter((100, ), max_tile_bytes=25, sub_tile_shape=(5, 5))
|
|
740
|
+
self.assertRaises(
|
|
741
|
+
ValueError,
|
|
742
|
+
splitter.calculate_split
|
|
743
|
+
)
|
|
744
|
+
|
|
745
|
+
splitter = \
|
|
746
|
+
ShapeSplitter((100, ), max_tile_bytes=25, sub_tile_shape=(5, ), max_tile_shape=(10, 10))
|
|
747
|
+
self.assertRaises(
|
|
748
|
+
ValueError,
|
|
749
|
+
splitter.calculate_split
|
|
750
|
+
)
|
|
751
|
+
|
|
752
|
+
splitter = \
|
|
753
|
+
ShapeSplitter((100, ), max_tile_shape=(10, ))
|
|
754
|
+
self.assertRaises(
|
|
755
|
+
ValueError,
|
|
756
|
+
splitter.calculate_split
|
|
757
|
+
)
|
|
758
|
+
|
|
759
|
+
splitter = \
|
|
760
|
+
ShapeSplitter((100, ), sub_tile_shape=(10, ))
|
|
761
|
+
self.assertRaises(
|
|
762
|
+
ValueError,
|
|
763
|
+
splitter.calculate_split
|
|
764
|
+
)
|
|
765
|
+
|
|
766
|
+
splitter = ShapeSplitter((10, ), tile_shape=(3,))
|
|
767
|
+
split = splitter.calculate_split()
|
|
768
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
769
|
+
self.logger.info("split =\n%s", split)
|
|
770
|
+
self.assertSequenceEqual((4,), split.shape)
|
|
771
|
+
self.assertSequenceEqual(
|
|
772
|
+
[(slice(0, 3),), (slice(3, 6),), (slice(6, 9),), (slice(9, 10),)],
|
|
773
|
+
split.tolist()
|
|
774
|
+
)
|
|
775
|
+
|
|
776
|
+
split1 = splitter.calculate_split_by_tile_shape()
|
|
777
|
+
self.assertTrue(_np.all(split == split1))
|
|
778
|
+
|
|
779
|
+
splitter = ShapeSplitter((10, ), tile_shape=(4,))
|
|
780
|
+
split = splitter.calculate_split()
|
|
781
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
782
|
+
self.logger.info("split =\n%s", split)
|
|
783
|
+
self.assertSequenceEqual((3,), split.shape)
|
|
784
|
+
self.assertSequenceEqual(
|
|
785
|
+
[(slice(0, 4),), (slice(4, 8),), (slice(8, 10),)],
|
|
786
|
+
split.tolist()
|
|
787
|
+
)
|
|
788
|
+
|
|
789
|
+
splitter = ShapeSplitter((10, ), tile_shape=(5,))
|
|
790
|
+
split = splitter.calculate_split()
|
|
791
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
792
|
+
self.logger.info("split =\n%s", split)
|
|
793
|
+
self.assertSequenceEqual((2,), split.shape)
|
|
794
|
+
self.assertSequenceEqual(
|
|
795
|
+
[(slice(0, 5),), (slice(5, 10),)],
|
|
796
|
+
split.tolist()
|
|
797
|
+
)
|
|
798
|
+
|
|
799
|
+
splitter = ShapeSplitter((10, ), tile_shape=(10,))
|
|
800
|
+
split = splitter.calculate_split()
|
|
801
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
802
|
+
self.logger.info("split =\n%s", split)
|
|
803
|
+
self.assertSequenceEqual((1,), split.shape)
|
|
804
|
+
self.assertSequenceEqual(
|
|
805
|
+
[(slice(0, 10),)],
|
|
806
|
+
split.tolist()
|
|
807
|
+
)
|
|
808
|
+
|
|
809
|
+
splitter = ShapeSplitter((10, ), tile_shape=(11,))
|
|
810
|
+
split = splitter.calculate_split()
|
|
811
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
812
|
+
self.logger.info("split =\n%s", split)
|
|
813
|
+
self.assertSequenceEqual((1,), split.shape)
|
|
814
|
+
self.assertSequenceEqual(
|
|
815
|
+
[(slice(0, 10),)],
|
|
816
|
+
split.tolist()
|
|
817
|
+
)
|
|
818
|
+
|
|
819
|
+
def test_calculate_split_by_tile_shape_2d(self):
|
|
820
|
+
"""
|
|
821
|
+
Test for case for splitting by explicit tile shape. For example::
|
|
822
|
+
|
|
823
|
+
ShapeSplitter(array_shape=(10, 17), tile_shape=(3, 8)).calculate_split()
|
|
824
|
+
|
|
825
|
+
"""
|
|
826
|
+
|
|
827
|
+
splitter = ShapeSplitter((10, 17), tile_shape=(3, 8))
|
|
828
|
+
split = splitter.calculate_split()
|
|
829
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
830
|
+
self.logger.info("split =\n%s", split)
|
|
831
|
+
self.assertSequenceEqual((4, 3), split.shape)
|
|
832
|
+
self.assertSequenceEqual(
|
|
833
|
+
shape_split(splitter.array_shape, [[3, 6, 9], [8, 16]]).flatten().tolist(),
|
|
834
|
+
split.flatten().tolist()
|
|
835
|
+
)
|
|
836
|
+
|
|
837
|
+
splitter = ShapeSplitter((10, 17), tile_shape=(2, 9))
|
|
838
|
+
split = splitter.calculate_split()
|
|
839
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
840
|
+
self.logger.info("split =\n%s", split)
|
|
841
|
+
self.assertSequenceEqual((5, 2), split.shape)
|
|
842
|
+
self.assertSequenceEqual(
|
|
843
|
+
shape_split(splitter.array_shape, [[2, 4, 6, 8], [9, ]]).flatten().tolist(),
|
|
844
|
+
split.flatten().tolist()
|
|
845
|
+
)
|
|
846
|
+
|
|
847
|
+
def test_calculate_split_by_tile_max_bytes_1d(self):
|
|
848
|
+
"""
|
|
849
|
+
Test for case for splitting with maximum number of tile bytes constraint.
|
|
850
|
+
For example::
|
|
851
|
+
|
|
852
|
+
ShapeSplitter((512, ), max_tile_bytes=256, array_itemsize=1).calculate_split()
|
|
853
|
+
|
|
854
|
+
"""
|
|
855
|
+
|
|
856
|
+
splitter = ShapeSplitter((512, ), max_tile_bytes=256, array_itemsize=1)
|
|
857
|
+
split = splitter.calculate_split()
|
|
858
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
859
|
+
self.logger.info("split =\n%s", split)
|
|
860
|
+
self.assertSequenceEqual((2,), split.shape)
|
|
861
|
+
self.assertSequenceEqual(
|
|
862
|
+
[(slice(0, 256),), (slice(256, 512),)],
|
|
863
|
+
split.tolist()
|
|
864
|
+
)
|
|
865
|
+
|
|
866
|
+
splitter = ShapeSplitter((512, ), max_tile_bytes=256, array_itemsize=2)
|
|
867
|
+
split = splitter.calculate_split()
|
|
868
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
869
|
+
self.logger.info("split =\n%s", split)
|
|
870
|
+
self.assertSequenceEqual((4,), split.shape)
|
|
871
|
+
self.assertSequenceEqual(
|
|
872
|
+
[(slice(0, 128),), (slice(128, 256),), (slice(256, 384),), (slice(384, 512),)],
|
|
873
|
+
split.tolist()
|
|
874
|
+
)
|
|
875
|
+
|
|
876
|
+
split1 = splitter.calculate_split_by_tile_max_bytes()
|
|
877
|
+
self.assertTrue(_np.all(split == split1))
|
|
878
|
+
|
|
879
|
+
splitter = ShapeSplitter((512, ), max_tile_bytes=511, array_itemsize=2)
|
|
880
|
+
split = splitter.calculate_split()
|
|
881
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
882
|
+
self.logger.info("split =\n%s", split)
|
|
883
|
+
self.assertSequenceEqual((3,), split.shape)
|
|
884
|
+
self.assertSequenceEqual(
|
|
885
|
+
[(slice(0, 171),), (slice(171, 342),), (slice(342, 512),)],
|
|
886
|
+
split.tolist()
|
|
887
|
+
)
|
|
888
|
+
|
|
889
|
+
splitter = ShapeSplitter((512, ), max_tile_bytes=256, array_itemsize=1, halo=1)
|
|
890
|
+
split = splitter.calculate_split()
|
|
891
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
892
|
+
self.logger.info("split =\n%s", split)
|
|
893
|
+
self.assertSequenceEqual((3,), split.shape)
|
|
894
|
+
self.assertSequenceEqual(
|
|
895
|
+
[(slice(0, 172),), (slice(170, 343),), (slice(341, 512),)],
|
|
896
|
+
split.tolist()
|
|
897
|
+
)
|
|
898
|
+
|
|
899
|
+
splitter = \
|
|
900
|
+
ShapeSplitter((512, ), max_tile_bytes=256, array_itemsize=1, max_tile_shape=(128,))
|
|
901
|
+
split = splitter.calculate_split()
|
|
902
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
903
|
+
self.logger.info("split =\n%s", split)
|
|
904
|
+
self.assertSequenceEqual((4,), split.shape)
|
|
905
|
+
self.assertSequenceEqual(
|
|
906
|
+
[(slice(0, 128),), (slice(128, 256),), (slice(256, 384),), (slice(384, 512),)],
|
|
907
|
+
split.tolist()
|
|
908
|
+
)
|
|
909
|
+
|
|
910
|
+
splitter = \
|
|
911
|
+
ShapeSplitter((512, ), max_tile_bytes=256, array_itemsize=1, sub_tile_shape=(130,))
|
|
912
|
+
split = splitter.calculate_split()
|
|
913
|
+
self.logger.info("split.shape = %s", split.shape)
|
|
914
|
+
self.logger.info("split =\n%s", split)
|
|
915
|
+
self.assertSequenceEqual((4,), split.shape)
|
|
916
|
+
self.assertSequenceEqual(
|
|
917
|
+
[(slice(0, 130),), (slice(130, 260),), (slice(260, 390),), (slice(390, 512),)],
|
|
918
|
+
split.tolist()
|
|
919
|
+
)
|
|
920
|
+
|
|
921
|
+
def test_calculate_split_with_array_start_1d(self):
|
|
922
|
+
"""
|
|
923
|
+
Test for case for splitting with explicit array start multi-index. For example::
|
|
924
|
+
|
|
925
|
+
shape_split((10,), 2, array_start=(32,))
|
|
926
|
+
|
|
927
|
+
"""
|
|
928
|
+
|
|
929
|
+
self.assertRaises(
|
|
930
|
+
ValueError,
|
|
931
|
+
shape_split,
|
|
932
|
+
(10,),
|
|
933
|
+
2,
|
|
934
|
+
array_start=(2, 3)
|
|
935
|
+
)
|
|
936
|
+
split = shape_split((10,), 2, array_start=(0,))
|
|
937
|
+
self.assertSequenceEqual(
|
|
938
|
+
[(slice(0, 5),), (slice(5, 10),)],
|
|
939
|
+
split.tolist()
|
|
940
|
+
)
|
|
941
|
+
|
|
942
|
+
split = shape_split((10,), 2, array_start=(32,))
|
|
943
|
+
self.assertSequenceEqual(
|
|
944
|
+
[(slice(32, 37),), (slice(37, 42),)],
|
|
945
|
+
split.tolist()
|
|
946
|
+
)
|
|
947
|
+
|
|
948
|
+
def test_calculate_split_with_array_start_2d(self):
|
|
949
|
+
"""
|
|
950
|
+
Test for case for splitting with explicit array start multi-index. For example::
|
|
951
|
+
|
|
952
|
+
shape_split((10, 12), axis=(2, 2), array_start=(32, 16))
|
|
953
|
+
|
|
954
|
+
"""
|
|
955
|
+
|
|
956
|
+
split = shape_split((10, 12), axis=(2, 2), array_start=(0, 0))
|
|
957
|
+
self.assertSequenceEqual(
|
|
958
|
+
[
|
|
959
|
+
[(slice(0, 5), slice(0, 6)), (slice(0, 5), slice(6, 12))],
|
|
960
|
+
[(slice(5, 10), slice(0, 6)), (slice(5, 10), slice(6, 12))]
|
|
961
|
+
],
|
|
962
|
+
split.tolist()
|
|
963
|
+
)
|
|
964
|
+
|
|
965
|
+
split = shape_split((10, 12), axis=(2, 2), array_start=(32, 16))
|
|
966
|
+
self.assertSequenceEqual(
|
|
967
|
+
[
|
|
968
|
+
[(slice(32, 37), slice(16, 22)), (slice(32, 37), slice(22, 28))],
|
|
969
|
+
[(slice(37, 42), slice(16, 22)), (slice(37, 42), slice(22, 28))]
|
|
970
|
+
],
|
|
971
|
+
split.tolist()
|
|
972
|
+
)
|
|
973
|
+
|
|
974
|
+
def test_calculate_split_with_halo_1d(self):
|
|
975
|
+
"""
|
|
976
|
+
Test for case for splitting with explicit halo. For example::
|
|
977
|
+
|
|
978
|
+
shape_split((10,), 3, halo=[(1, 2), ])
|
|
979
|
+
|
|
980
|
+
"""
|
|
981
|
+
|
|
982
|
+
split = shape_split((10,), 3, halo=(0,))
|
|
983
|
+
self.assertSequenceEqual(
|
|
984
|
+
[(slice(0, 4),), (slice(4, 7),), (slice(7, 10),)],
|
|
985
|
+
split.tolist()
|
|
986
|
+
)
|
|
987
|
+
|
|
988
|
+
split = shape_split((10,), 3, halo=(0, 0))
|
|
989
|
+
self.assertSequenceEqual(
|
|
990
|
+
[(slice(0, 4),), (slice(4, 7),), (slice(7, 10),)],
|
|
991
|
+
split.tolist()
|
|
992
|
+
)
|
|
993
|
+
|
|
994
|
+
split = shape_split((10,), 3, halo=(1, 0))
|
|
995
|
+
self.assertSequenceEqual(
|
|
996
|
+
[(slice(0, 4),), (slice(3, 7),), (slice(6, 10),)],
|
|
997
|
+
split.tolist()
|
|
998
|
+
)
|
|
999
|
+
|
|
1000
|
+
split = shape_split((10,), 3, halo=(0, 1))
|
|
1001
|
+
self.assertSequenceEqual(
|
|
1002
|
+
[(slice(0, 5),), (slice(4, 8),), (slice(7, 10),)],
|
|
1003
|
+
split.tolist()
|
|
1004
|
+
)
|
|
1005
|
+
|
|
1006
|
+
split = shape_split((10,), 3, halo=(1, 1))
|
|
1007
|
+
self.assertSequenceEqual(
|
|
1008
|
+
[(slice(0, 5),), (slice(3, 8),), (slice(6, 10),)],
|
|
1009
|
+
split.tolist()
|
|
1010
|
+
)
|
|
1011
|
+
|
|
1012
|
+
split = shape_split((10,), 3, halo=[(1, 2), ])
|
|
1013
|
+
self.assertSequenceEqual(
|
|
1014
|
+
[(slice(0, 6),), (slice(3, 9),), (slice(6, 10),)],
|
|
1015
|
+
split.tolist()
|
|
1016
|
+
)
|
|
1017
|
+
|
|
1018
|
+
split = shape_split((10,), 3, halo=1)
|
|
1019
|
+
self.assertSequenceEqual(
|
|
1020
|
+
[(slice(0, 5),), (slice(3, 8),), (slice(6, 10),)],
|
|
1021
|
+
split.tolist()
|
|
1022
|
+
)
|
|
1023
|
+
|
|
1024
|
+
split = shape_split((10,), 3, halo=1, tile_bounds_policy=ARRAY_BOUNDS)
|
|
1025
|
+
self.assertSequenceEqual(
|
|
1026
|
+
[(slice(0, 5),), (slice(3, 8),), (slice(6, 10),)],
|
|
1027
|
+
split.tolist()
|
|
1028
|
+
)
|
|
1029
|
+
|
|
1030
|
+
split = shape_split((10,), 3, halo=1, tile_bounds_policy=None)
|
|
1031
|
+
self.assertSequenceEqual(
|
|
1032
|
+
[(slice(0, 5),), (slice(3, 8),), (slice(6, 10),)],
|
|
1033
|
+
split.tolist()
|
|
1034
|
+
)
|
|
1035
|
+
|
|
1036
|
+
split = shape_split((10,), 3, halo=1, tile_bounds_policy=NO_BOUNDS)
|
|
1037
|
+
self.assertSequenceEqual(
|
|
1038
|
+
[(slice(-1, 5),), (slice(3, 8),), (slice(6, 11),)],
|
|
1039
|
+
split.tolist()
|
|
1040
|
+
)
|
|
1041
|
+
|
|
1042
|
+
split = shape_split((10,), 3, halo=((2, 3),), tile_bounds_policy=NO_BOUNDS)
|
|
1043
|
+
self.assertSequenceEqual(
|
|
1044
|
+
[(slice(-2, 7),), (slice(2, 10),), (slice(5, 13),)],
|
|
1045
|
+
split.tolist()
|
|
1046
|
+
)
|
|
1047
|
+
|
|
1048
|
+
split = shape_split((10,), 3, halo=(2, 3), tile_bounds_policy=NO_BOUNDS)
|
|
1049
|
+
self.assertSequenceEqual(
|
|
1050
|
+
[(slice(-2, 7),), (slice(2, 10),), (slice(5, 13),)],
|
|
1051
|
+
split.tolist()
|
|
1052
|
+
)
|
|
1053
|
+
|
|
1054
|
+
def test_calculate_split_with_halo_2d(self):
|
|
1055
|
+
"""
|
|
1056
|
+
Test for case for splitting with explicit halo. For example::
|
|
1057
|
+
|
|
1058
|
+
shape_split(
|
|
1059
|
+
(15, 13),
|
|
1060
|
+
axis=[3, 3],
|
|
1061
|
+
halo=[[1, 2], [2, 3]],
|
|
1062
|
+
tile_bounds_policy=ARRAY_BOUNDS
|
|
1063
|
+
)
|
|
1064
|
+
|
|
1065
|
+
"""
|
|
1066
|
+
|
|
1067
|
+
self.assertRaises(
|
|
1068
|
+
ValueError,
|
|
1069
|
+
shape_split,
|
|
1070
|
+
(15, 13),
|
|
1071
|
+
axis=[3, 3],
|
|
1072
|
+
halo=[0, 1, 2]
|
|
1073
|
+
)
|
|
1074
|
+
|
|
1075
|
+
self.assertRaises(
|
|
1076
|
+
ValueError,
|
|
1077
|
+
shape_split,
|
|
1078
|
+
(15, 13),
|
|
1079
|
+
axis=[3, 3],
|
|
1080
|
+
halo=[0, 1],
|
|
1081
|
+
tile_bounds_policy="bogus"
|
|
1082
|
+
)
|
|
1083
|
+
|
|
1084
|
+
split = shape_split((15, 13), axis=[3, 3], halo=0)
|
|
1085
|
+
self.assertSequenceEqual(
|
|
1086
|
+
[
|
|
1087
|
+
[
|
|
1088
|
+
(slice(0, 5), slice(0, 5)),
|
|
1089
|
+
(slice(0, 5), slice(5, 9)),
|
|
1090
|
+
(slice(0, 5), slice(9, 13))
|
|
1091
|
+
],
|
|
1092
|
+
[
|
|
1093
|
+
(slice(5, 10), slice(0, 5)),
|
|
1094
|
+
(slice(5, 10), slice(5, 9)),
|
|
1095
|
+
(slice(5, 10), slice(9, 13))
|
|
1096
|
+
],
|
|
1097
|
+
[
|
|
1098
|
+
(slice(10, 15), slice(0, 5)),
|
|
1099
|
+
(slice(10, 15), slice(5, 9)),
|
|
1100
|
+
(slice(10, 15), slice(9, 13))
|
|
1101
|
+
],
|
|
1102
|
+
],
|
|
1103
|
+
split.tolist()
|
|
1104
|
+
)
|
|
1105
|
+
|
|
1106
|
+
split = shape_split((15, 13), axis=[3, 3], halo=(0, 0))
|
|
1107
|
+
self.assertSequenceEqual(
|
|
1108
|
+
[
|
|
1109
|
+
[
|
|
1110
|
+
(slice(0, 5), slice(0, 5)),
|
|
1111
|
+
(slice(0, 5), slice(5, 9)),
|
|
1112
|
+
(slice(0, 5), slice(9, 13))
|
|
1113
|
+
],
|
|
1114
|
+
[
|
|
1115
|
+
(slice(5, 10), slice(0, 5)),
|
|
1116
|
+
(slice(5, 10), slice(5, 9)),
|
|
1117
|
+
(slice(5, 10), slice(9, 13))
|
|
1118
|
+
],
|
|
1119
|
+
[
|
|
1120
|
+
(slice(10, 15), slice(0, 5)),
|
|
1121
|
+
(slice(10, 15), slice(5, 9)),
|
|
1122
|
+
(slice(10, 15), slice(9, 13))
|
|
1123
|
+
],
|
|
1124
|
+
],
|
|
1125
|
+
split.tolist()
|
|
1126
|
+
)
|
|
1127
|
+
|
|
1128
|
+
split = shape_split((15, 13), axis=[3, 3], halo=[[0, 0], [0, 0]])
|
|
1129
|
+
self.assertSequenceEqual(
|
|
1130
|
+
[
|
|
1131
|
+
[
|
|
1132
|
+
(slice(0, 5), slice(0, 5)),
|
|
1133
|
+
(slice(0, 5), slice(5, 9)),
|
|
1134
|
+
(slice(0, 5), slice(9, 13))
|
|
1135
|
+
],
|
|
1136
|
+
[
|
|
1137
|
+
(slice(5, 10), slice(0, 5)),
|
|
1138
|
+
(slice(5, 10), slice(5, 9)),
|
|
1139
|
+
(slice(5, 10), slice(9, 13))
|
|
1140
|
+
],
|
|
1141
|
+
[
|
|
1142
|
+
(slice(10, 15), slice(0, 5)),
|
|
1143
|
+
(slice(10, 15), slice(5, 9)),
|
|
1144
|
+
(slice(10, 15), slice(9, 13))
|
|
1145
|
+
],
|
|
1146
|
+
],
|
|
1147
|
+
split.tolist()
|
|
1148
|
+
)
|
|
1149
|
+
|
|
1150
|
+
split = \
|
|
1151
|
+
shape_split(
|
|
1152
|
+
(15, 13),
|
|
1153
|
+
axis=[3, 3],
|
|
1154
|
+
halo=[[0, 0], [0, 0]],
|
|
1155
|
+
tile_bounds_policy=ARRAY_BOUNDS
|
|
1156
|
+
)
|
|
1157
|
+
self.assertSequenceEqual(
|
|
1158
|
+
[
|
|
1159
|
+
[
|
|
1160
|
+
(slice(0, 5), slice(0, 5)),
|
|
1161
|
+
(slice(0, 5), slice(5, 9)),
|
|
1162
|
+
(slice(0, 5), slice(9, 13))
|
|
1163
|
+
],
|
|
1164
|
+
[
|
|
1165
|
+
(slice(5, 10), slice(0, 5)),
|
|
1166
|
+
(slice(5, 10), slice(5, 9)),
|
|
1167
|
+
(slice(5, 10), slice(9, 13))
|
|
1168
|
+
],
|
|
1169
|
+
[
|
|
1170
|
+
(slice(10, 15), slice(0, 5)),
|
|
1171
|
+
(slice(10, 15), slice(5, 9)),
|
|
1172
|
+
(slice(10, 15), slice(9, 13))
|
|
1173
|
+
],
|
|
1174
|
+
],
|
|
1175
|
+
split.tolist()
|
|
1176
|
+
)
|
|
1177
|
+
|
|
1178
|
+
split = \
|
|
1179
|
+
shape_split(
|
|
1180
|
+
(15, 13),
|
|
1181
|
+
axis=[3, 3],
|
|
1182
|
+
halo=[[0, 0], [0, 0]],
|
|
1183
|
+
tile_bounds_policy=NO_BOUNDS
|
|
1184
|
+
)
|
|
1185
|
+
self.assertSequenceEqual(
|
|
1186
|
+
[
|
|
1187
|
+
[
|
|
1188
|
+
(slice(0, 5), slice(0, 5)),
|
|
1189
|
+
(slice(0, 5), slice(5, 9)),
|
|
1190
|
+
(slice(0, 5), slice(9, 13))
|
|
1191
|
+
],
|
|
1192
|
+
[
|
|
1193
|
+
(slice(5, 10), slice(0, 5)),
|
|
1194
|
+
(slice(5, 10), slice(5, 9)),
|
|
1195
|
+
(slice(5, 10), slice(9, 13))
|
|
1196
|
+
],
|
|
1197
|
+
[
|
|
1198
|
+
(slice(10, 15), slice(0, 5)),
|
|
1199
|
+
(slice(10, 15), slice(5, 9)),
|
|
1200
|
+
(slice(10, 15), slice(9, 13))
|
|
1201
|
+
],
|
|
1202
|
+
],
|
|
1203
|
+
split.tolist()
|
|
1204
|
+
)
|
|
1205
|
+
|
|
1206
|
+
split = \
|
|
1207
|
+
shape_split(
|
|
1208
|
+
(15, 13),
|
|
1209
|
+
axis=[3, 3],
|
|
1210
|
+
halo=1,
|
|
1211
|
+
tile_bounds_policy=ARRAY_BOUNDS
|
|
1212
|
+
)
|
|
1213
|
+
self.assertSequenceEqual(
|
|
1214
|
+
[
|
|
1215
|
+
[
|
|
1216
|
+
(slice(0, 6), slice(0, 6)),
|
|
1217
|
+
(slice(0, 6), slice(4, 10)),
|
|
1218
|
+
(slice(0, 6), slice(8, 13))
|
|
1219
|
+
],
|
|
1220
|
+
[
|
|
1221
|
+
(slice(4, 11), slice(0, 6)),
|
|
1222
|
+
(slice(4, 11), slice(4, 10)),
|
|
1223
|
+
(slice(4, 11), slice(8, 13))
|
|
1224
|
+
],
|
|
1225
|
+
[
|
|
1226
|
+
(slice(9, 15), slice(0, 6)),
|
|
1227
|
+
(slice(9, 15), slice(4, 10)),
|
|
1228
|
+
(slice(9, 15), slice(8, 13))
|
|
1229
|
+
],
|
|
1230
|
+
],
|
|
1231
|
+
split.tolist()
|
|
1232
|
+
)
|
|
1233
|
+
|
|
1234
|
+
split = \
|
|
1235
|
+
shape_split(
|
|
1236
|
+
(15, 13),
|
|
1237
|
+
axis=[3, 3],
|
|
1238
|
+
halo=(2, 3),
|
|
1239
|
+
tile_bounds_policy=ARRAY_BOUNDS
|
|
1240
|
+
)
|
|
1241
|
+
self.assertSequenceEqual(
|
|
1242
|
+
[
|
|
1243
|
+
[
|
|
1244
|
+
(slice(0, 7), slice(0, 8)),
|
|
1245
|
+
(slice(0, 7), slice(2, 12)),
|
|
1246
|
+
(slice(0, 7), slice(6, 13))
|
|
1247
|
+
],
|
|
1248
|
+
[
|
|
1249
|
+
(slice(3, 12), slice(0, 8)),
|
|
1250
|
+
(slice(3, 12), slice(2, 12)),
|
|
1251
|
+
(slice(3, 12), slice(6, 13))
|
|
1252
|
+
],
|
|
1253
|
+
[
|
|
1254
|
+
(slice(8, 15), slice(0, 8)),
|
|
1255
|
+
(slice(8, 15), slice(2, 12)),
|
|
1256
|
+
(slice(8, 15), slice(6, 13))
|
|
1257
|
+
],
|
|
1258
|
+
],
|
|
1259
|
+
split.tolist()
|
|
1260
|
+
)
|
|
1261
|
+
|
|
1262
|
+
split = \
|
|
1263
|
+
shape_split(
|
|
1264
|
+
(15, 13),
|
|
1265
|
+
axis=[3, 3],
|
|
1266
|
+
halo=[[1, 2], [2, 3]],
|
|
1267
|
+
tile_bounds_policy=ARRAY_BOUNDS
|
|
1268
|
+
)
|
|
1269
|
+
self.assertSequenceEqual(
|
|
1270
|
+
[
|
|
1271
|
+
[
|
|
1272
|
+
(slice(0, 7), slice(0, 8)),
|
|
1273
|
+
(slice(0, 7), slice(3, 12)),
|
|
1274
|
+
(slice(0, 7), slice(7, 13))
|
|
1275
|
+
],
|
|
1276
|
+
[
|
|
1277
|
+
(slice(4, 12), slice(0, 8)),
|
|
1278
|
+
(slice(4, 12), slice(3, 12)),
|
|
1279
|
+
(slice(4, 12), slice(7, 13))
|
|
1280
|
+
],
|
|
1281
|
+
[
|
|
1282
|
+
(slice(9, 15), slice(0, 8)),
|
|
1283
|
+
(slice(9, 15), slice(3, 12)),
|
|
1284
|
+
(slice(9, 15), slice(7, 13))
|
|
1285
|
+
],
|
|
1286
|
+
],
|
|
1287
|
+
split.tolist()
|
|
1288
|
+
)
|
|
1289
|
+
|
|
1290
|
+
# NO_BOUNDS
|
|
1291
|
+
|
|
1292
|
+
split = \
|
|
1293
|
+
shape_split(
|
|
1294
|
+
(15, 13),
|
|
1295
|
+
axis=[3, 3],
|
|
1296
|
+
halo=1,
|
|
1297
|
+
tile_bounds_policy=NO_BOUNDS
|
|
1298
|
+
)
|
|
1299
|
+
self.assertSequenceEqual(
|
|
1300
|
+
[
|
|
1301
|
+
[
|
|
1302
|
+
(slice(-1, 6), slice(-1, 6)),
|
|
1303
|
+
(slice(-1, 6), slice(4, 10)),
|
|
1304
|
+
(slice(-1, 6), slice(8, 14))
|
|
1305
|
+
],
|
|
1306
|
+
[
|
|
1307
|
+
(slice(4, 11), slice(-1, 6)),
|
|
1308
|
+
(slice(4, 11), slice(4, 10)),
|
|
1309
|
+
(slice(4, 11), slice(8, 14))
|
|
1310
|
+
],
|
|
1311
|
+
[
|
|
1312
|
+
(slice(9, 16), slice(-1, 6)),
|
|
1313
|
+
(slice(9, 16), slice(4, 10)),
|
|
1314
|
+
(slice(9, 16), slice(8, 14))
|
|
1315
|
+
],
|
|
1316
|
+
],
|
|
1317
|
+
split.tolist()
|
|
1318
|
+
)
|
|
1319
|
+
|
|
1320
|
+
split = \
|
|
1321
|
+
shape_split(
|
|
1322
|
+
(15, 13),
|
|
1323
|
+
axis=[3, 3],
|
|
1324
|
+
halo=(2, 3),
|
|
1325
|
+
tile_bounds_policy=NO_BOUNDS
|
|
1326
|
+
)
|
|
1327
|
+
self.assertSequenceEqual(
|
|
1328
|
+
[
|
|
1329
|
+
[
|
|
1330
|
+
(slice(-2, 7), slice(-3, 8)),
|
|
1331
|
+
(slice(-2, 7), slice(2, 12)),
|
|
1332
|
+
(slice(-2, 7), slice(6, 16))
|
|
1333
|
+
],
|
|
1334
|
+
[
|
|
1335
|
+
(slice(3, 12), slice(-3, 8)),
|
|
1336
|
+
(slice(3, 12), slice(2, 12)),
|
|
1337
|
+
(slice(3, 12), slice(6, 16))
|
|
1338
|
+
],
|
|
1339
|
+
[
|
|
1340
|
+
(slice(8, 17), slice(-3, 8)),
|
|
1341
|
+
(slice(8, 17), slice(2, 12)),
|
|
1342
|
+
(slice(8, 17), slice(6, 16))
|
|
1343
|
+
],
|
|
1344
|
+
],
|
|
1345
|
+
split.tolist()
|
|
1346
|
+
)
|
|
1347
|
+
|
|
1348
|
+
split = \
|
|
1349
|
+
shape_split(
|
|
1350
|
+
(15, 13),
|
|
1351
|
+
axis=[3, 3],
|
|
1352
|
+
halo=[[1, 2], [2, 3]],
|
|
1353
|
+
tile_bounds_policy=NO_BOUNDS
|
|
1354
|
+
)
|
|
1355
|
+
self.assertSequenceEqual(
|
|
1356
|
+
[
|
|
1357
|
+
[
|
|
1358
|
+
(slice(-1, 7), slice(-2, 8)),
|
|
1359
|
+
(slice(-1, 7), slice(3, 12)),
|
|
1360
|
+
(slice(-1, 7), slice(7, 16))
|
|
1361
|
+
],
|
|
1362
|
+
[
|
|
1363
|
+
(slice(4, 12), slice(-2, 8)),
|
|
1364
|
+
(slice(4, 12), slice(3, 12)),
|
|
1365
|
+
(slice(4, 12), slice(7, 16))
|
|
1366
|
+
],
|
|
1367
|
+
[
|
|
1368
|
+
(slice(9, 17), slice(-2, 8)),
|
|
1369
|
+
(slice(9, 17), slice(3, 12)),
|
|
1370
|
+
(slice(9, 17), slice(7, 16))
|
|
1371
|
+
],
|
|
1372
|
+
],
|
|
1373
|
+
split.tolist()
|
|
1374
|
+
)
|
|
1375
|
+
|
|
1376
|
+
def test_calculate_split_with_halo_for_empty_tiles(self):
|
|
1377
|
+
"""
|
|
1378
|
+
Tests :func:`array_split.shape_split` for case of
|
|
1379
|
+
empty tiles and non-zero halo to ensure halo elements
|
|
1380
|
+
are not added to empty tiles.
|
|
1381
|
+
"""
|
|
1382
|
+
# Zero halo, empty tiles.
|
|
1383
|
+
split = shape_split((5, 12), axis=[8, 1], halo=0)
|
|
1384
|
+
self.assertSequenceEqual(
|
|
1385
|
+
(
|
|
1386
|
+
slice(4, 5, None),
|
|
1387
|
+
slice(0, 12, None)
|
|
1388
|
+
),
|
|
1389
|
+
split[4, 0].tolist()
|
|
1390
|
+
)
|
|
1391
|
+
for i in range(5, 8):
|
|
1392
|
+
self.assertSequenceEqual(
|
|
1393
|
+
(
|
|
1394
|
+
slice(5, 5, None),
|
|
1395
|
+
slice(0, 12, None)
|
|
1396
|
+
),
|
|
1397
|
+
split[i, 0].tolist()
|
|
1398
|
+
)
|
|
1399
|
+
|
|
1400
|
+
# Now ensure that empty tiles remain empty despite halo=1
|
|
1401
|
+
split = shape_split((5, 12), axis=[8, 1], halo=1)
|
|
1402
|
+
self.assertSequenceEqual(
|
|
1403
|
+
(
|
|
1404
|
+
slice(3, 5, None),
|
|
1405
|
+
slice(0, 12, None)
|
|
1406
|
+
),
|
|
1407
|
+
split[4, 0].tolist()
|
|
1408
|
+
)
|
|
1409
|
+
for i in range(5, 8):
|
|
1410
|
+
self.assertSequenceEqual(
|
|
1411
|
+
(
|
|
1412
|
+
slice(5, 5, None),
|
|
1413
|
+
slice(0, 12, None)
|
|
1414
|
+
),
|
|
1415
|
+
split[i, 0].tolist()
|
|
1416
|
+
)
|
|
1417
|
+
|
|
1418
|
+
split = shape_split((5, 12), axis=[8, 15], halo=1)
|
|
1419
|
+
self.assertSequenceEqual(
|
|
1420
|
+
(
|
|
1421
|
+
slice(3, 5, None),
|
|
1422
|
+
slice(0, 2, None)
|
|
1423
|
+
),
|
|
1424
|
+
split[4, 0].tolist()
|
|
1425
|
+
)
|
|
1426
|
+
for i in range(5, 8):
|
|
1427
|
+
for j in range(0, 12):
|
|
1428
|
+
self.assertEqual(
|
|
1429
|
+
slice(5, 5, None),
|
|
1430
|
+
split[i, j].tolist()[0]
|
|
1431
|
+
)
|
|
1432
|
+
for j in range(12, 15):
|
|
1433
|
+
self.assertSequenceEqual(
|
|
1434
|
+
(
|
|
1435
|
+
slice(5, 5, None),
|
|
1436
|
+
slice(12, 12, None)
|
|
1437
|
+
),
|
|
1438
|
+
split[i, j].tolist()
|
|
1439
|
+
)
|
|
1440
|
+
for i in range(0, 5):
|
|
1441
|
+
for j in range(12, 15):
|
|
1442
|
+
self.assertEqual(
|
|
1443
|
+
slice(12, 12, None),
|
|
1444
|
+
split[i, j].tolist()[1]
|
|
1445
|
+
)
|
|
1446
|
+
|
|
1447
|
+
def test_calculate_split_halos_from_extents(self):
|
|
1448
|
+
"""
|
|
1449
|
+
Tests the :meth:`array_split.split.ShapeSplitter.calculate_split_halos_from_extents`
|
|
1450
|
+
method.
|
|
1451
|
+
"""
|
|
1452
|
+
|
|
1453
|
+
# Tiles wider than halo width
|
|
1454
|
+
splitter = ShapeSplitter((15, 13), axis=[3, 3], halo=0)
|
|
1455
|
+
splt = splitter.calculate_split()
|
|
1456
|
+
splt_halos = splitter.calculate_split_halos_from_extents()
|
|
1457
|
+
self.assertSequenceEqual(splt.shape, splt_halos.shape)
|
|
1458
|
+
self.assertTrue(_np.all(_np.asarray(splt_halos.tolist()) == 0))
|
|
1459
|
+
|
|
1460
|
+
# Some tiles narrower than halo width
|
|
1461
|
+
splitter = ShapeSplitter((15, 13), axis=[3, 3], halo=5, tile_bounds_policy=ARRAY_BOUNDS)
|
|
1462
|
+
splt = splitter.calculate_split()
|
|
1463
|
+
splt_halos = splitter.calculate_split_halos_from_extents()
|
|
1464
|
+
self.assertSequenceEqual(splt.shape, splt_halos.shape)
|
|
1465
|
+
for i in range(3):
|
|
1466
|
+
self.assertSequenceEqual([0, 5], tuple(splt_halos[0, i][0]))
|
|
1467
|
+
self.assertSequenceEqual([5, 5], tuple(splt_halos[1, i][0]))
|
|
1468
|
+
self.assertSequenceEqual([5, 0], tuple(splt_halos[2, i][0]))
|
|
1469
|
+
self.assertSequenceEqual([0, 5], tuple(splt_halos[i, 0][1]))
|
|
1470
|
+
self.assertSequenceEqual([5, 4], tuple(splt_halos[i, 1][1]))
|
|
1471
|
+
self.assertSequenceEqual([5, 0], tuple(splt_halos[i, 2][1]))
|
|
1472
|
+
|
|
1473
|
+
splitter = ShapeSplitter((15, 13), axis=[3, 3], halo=0)
|
|
1474
|
+
splt = splitter.calculate_split()
|
|
1475
|
+
splt_halos = splitter.calculate_split_halos_from_extents()
|
|
1476
|
+
self.assertSequenceEqual(splt.shape, splt_halos.shape)
|
|
1477
|
+
self.assertTrue(_np.all(_np.asarray(splt_halos.tolist()) == 0))
|
|
1478
|
+
|
|
1479
|
+
# Tiles narrower than halo width
|
|
1480
|
+
splitter = ShapeSplitter((5, 13), axis=[5, 3], halo=5, tile_bounds_policy=ARRAY_BOUNDS)
|
|
1481
|
+
splt = splitter.calculate_split()
|
|
1482
|
+
splt_halos = splitter.calculate_split_halos_from_extents()
|
|
1483
|
+
self.assertSequenceEqual(splt.shape, splt_halos.shape)
|
|
1484
|
+
for i in range(3):
|
|
1485
|
+
self.assertSequenceEqual([0, 4], tuple(splt_halos[0, i][0]))
|
|
1486
|
+
self.assertSequenceEqual([1, 3], tuple(splt_halos[1, i][0]))
|
|
1487
|
+
self.assertSequenceEqual([2, 2], tuple(splt_halos[2, i][0]))
|
|
1488
|
+
self.assertSequenceEqual([3, 1], tuple(splt_halos[3, i][0]))
|
|
1489
|
+
self.assertSequenceEqual([4, 0], tuple(splt_halos[4, i][0]))
|
|
1490
|
+
for i in range(5):
|
|
1491
|
+
self.assertSequenceEqual([0, 5], tuple(splt_halos[i, 0][1]))
|
|
1492
|
+
self.assertSequenceEqual([5, 4], tuple(splt_halos[i, 1][1]))
|
|
1493
|
+
self.assertSequenceEqual([5, 0], tuple(splt_halos[i, 2][1]))
|
|
1494
|
+
|
|
1495
|
+
# Zero sized tiles
|
|
1496
|
+
# Tiles narrower than halo width
|
|
1497
|
+
splitter = ShapeSplitter((5, 13), axis=[7, 3], halo=5, tile_bounds_policy=ARRAY_BOUNDS)
|
|
1498
|
+
splt = splitter.calculate_split()
|
|
1499
|
+
splt_halos = splitter.calculate_split_halos_from_extents()
|
|
1500
|
+
self.assertSequenceEqual(splt.shape, splt_halos.shape)
|
|
1501
|
+
for i in range(3):
|
|
1502
|
+
self.assertSequenceEqual([0, 4], tuple(splt_halos[0, i][0]))
|
|
1503
|
+
self.assertSequenceEqual([1, 3], tuple(splt_halos[1, i][0]))
|
|
1504
|
+
self.assertSequenceEqual([2, 2], tuple(splt_halos[2, i][0]))
|
|
1505
|
+
self.assertSequenceEqual([3, 1], tuple(splt_halos[3, i][0]))
|
|
1506
|
+
self.assertSequenceEqual([4, 0], tuple(splt_halos[4, i][0]))
|
|
1507
|
+
self.assertSequenceEqual([0, 0], tuple(splt_halos[5, i][0]))
|
|
1508
|
+
self.assertSequenceEqual([0, 0], tuple(splt_halos[6, i][0]))
|
|
1509
|
+
for i in range(5):
|
|
1510
|
+
self.assertSequenceEqual([0, 5], tuple(splt_halos[i, 0][1]))
|
|
1511
|
+
self.assertSequenceEqual([5, 4], tuple(splt_halos[i, 1][1]))
|
|
1512
|
+
self.assertSequenceEqual([5, 0], tuple(splt_halos[i, 2][1]))
|
|
1513
|
+
|
|
1514
|
+
|
|
1515
|
+
__all__ = [s for s in dir() if not s.startswith('_')]
|
|
1516
|
+
|
|
1517
|
+
_unittest.main(__name__)
|