antspymm 1.3.1__py3-none-any.whl → 1.3.3__py3-none-any.whl

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antspymm/mm.py CHANGED
@@ -10440,6 +10440,8 @@ def brainmap_figure(statistical_df, data_dictionary_path, output_prefix, brain_i
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  mydict = pd.read_csv(data_dictionary_path)
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  mydict = mydict[~mydict['Measurement'].str.contains("tractography-based connectivity", na=False)]
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+ statistical_df['anat'] = statistical_df['anat'].str.replace("_", ".", regex=True)
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+
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  # Load image and process it
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  edgeimg = ants.iMath(brain_image,"Normalize")
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  if edge_image_dilation > 0:
@@ -10520,6 +10522,10 @@ def brainmap_figure(statistical_df, data_dictionary_path, output_prefix, brain_i
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  elif whichatlas == 'yeo_homotopic':
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  myext = 'yeo'
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  if myext is None and verbose:
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+ if whichatlas is None:
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+ whichatlas='None'
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+ if anattoshow[k] is None:
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+ anattoshow[k]='None'
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  print( "MYEXT " + anattoshow[k] + ' unfound ' + whichatlas )
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  else:
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  if verbose:
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: antspymm
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- Version: 1.3.1
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+ Version: 1.3.3
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  Summary: multi-channel/time-series medical image processing with antspyx
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  Home-page: https://github.com/stnava/ANTsPyMM
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  Author: Avants, Gosselin, Tustison, Reardon
@@ -0,0 +1,7 @@
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+ antspymm/__init__.py,sha256=1fHqufHndrkJwz473av8qOf5-1xm5r-aKHuMAETGIiE,4462
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+ antspymm/mm.py,sha256=R7W1v2ejIjIc5FZaAVLfyX9De8R5A_W2U-AyHZenxUg,476733
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+ antspymm-1.3.3.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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+ antspymm-1.3.3.dist-info/METADATA,sha256=PJy3nUwSUKIXi62KNJ73RlPBUwL16kX0ZP32gHq3IAg,14590
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+ antspymm-1.3.3.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
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+ antspymm-1.3.3.dist-info/top_level.txt,sha256=iyD1sRhCKzfwKRJLq5ZUeV9xsv1cGQl8Ejp6QwXM1Zg,9
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+ antspymm-1.3.3.dist-info/RECORD,,
@@ -1,7 +0,0 @@
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- antspymm/__init__.py,sha256=1fHqufHndrkJwz473av8qOf5-1xm5r-aKHuMAETGIiE,4462
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- antspymm/mm.py,sha256=pJY1DIRTLf3ai6znZFoEnvuMHR7JUbusAq__3aahi2E,476486
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- antspymm-1.3.1.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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- antspymm-1.3.1.dist-info/METADATA,sha256=rfgI7TXJi7yRVNE-h4_QFNN_J1gBI2JQMGDQn_-_qkE,14590
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- antspymm-1.3.1.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
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- antspymm-1.3.1.dist-info/top_level.txt,sha256=iyD1sRhCKzfwKRJLq5ZUeV9xsv1cGQl8Ejp6QwXM1Zg,9
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- antspymm-1.3.1.dist-info/RECORD,,