annotuneagent 0.1.0__py3-none-any.whl

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Files changed (38) hide show
  1. annotuneagent/__init__.py +68 -0
  2. annotuneagent/__main__.py +6 -0
  3. annotuneagent/_version.py +19 -0
  4. annotuneagent/annotate.py +93 -0
  5. annotuneagent/arbitrate.py +141 -0
  6. annotuneagent/cli.py +366 -0
  7. annotuneagent/decide.py +725 -0
  8. annotuneagent/evaluate.py +121 -0
  9. annotuneagent/evidence.py +606 -0
  10. annotuneagent/granularity/__init__.py +28 -0
  11. annotuneagent/granularity/cl_dag.py +179 -0
  12. annotuneagent/granularity/ontology_map.py +108 -0
  13. annotuneagent/granularity/relations.py +96 -0
  14. annotuneagent/hypotheses.py +38 -0
  15. annotuneagent/local_lora.py +706 -0
  16. annotuneagent/marker_plot.py +172 -0
  17. annotuneagent/markers.py +206 -0
  18. annotuneagent/markers.tsv +378 -0
  19. annotuneagent/mltools.py +128 -0
  20. annotuneagent/ontology/cl_isa.json +1 -0
  21. annotuneagent/ontology/granularity_policy.yaml +8 -0
  22. annotuneagent/ontology/ontology_map.jsonl +198 -0
  23. annotuneagent/prepare.py +1385 -0
  24. annotuneagent/py.typed +0 -0
  25. annotuneagent/read.py +76 -0
  26. annotuneagent/tokenizer/LICENSE +202 -0
  27. annotuneagent/tokenizer/merges.txt +247587 -0
  28. annotuneagent/tokenizer/tokenizer.json +495920 -0
  29. annotuneagent/tokenizer/tokenizer_config.json +305 -0
  30. annotuneagent/tokenizer/vocab.json +248046 -0
  31. annotuneagent/votes.py +83 -0
  32. annotuneagent/workflow.py +2037 -0
  33. annotuneagent-0.1.0.dist-info/METADATA +208 -0
  34. annotuneagent-0.1.0.dist-info/RECORD +38 -0
  35. annotuneagent-0.1.0.dist-info/WHEEL +5 -0
  36. annotuneagent-0.1.0.dist-info/entry_points.txt +2 -0
  37. annotuneagent-0.1.0.dist-info/licenses/LICENSE +201 -0
  38. annotuneagent-0.1.0.dist-info/top_level.txt +1 -0
annotuneagent/ontology/granularity_policy.yaml ADDED
@@ -0,0 +1,8 @@
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+ policy_version: "0.1"
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+ dataset_granularity_override: {}
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+ adopt_coarse_candidate: false
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+ require_for_adoption:
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+ - marker_coverage_min
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+ - dataset_convention_documented
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+ - reviewer
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+ default_route_on_conflict: review
annotuneagent/ontology/ontology_map.jsonl ADDED
@@ -0,0 +1,198 @@
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "B cell", "species": "*", "cl_id": "CL:0000236", "cl_label": "B cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "CD14-positive monocyte", "species": "*", "cl_id": "CL:0001054", "cl_label": "CD14-positive monocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "CD16-positive monocyte", "species": "*", "cl_id": "CL:0002396", "cl_label": "CD14-low, CD16-positive monocyte", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "CD14-low, CD16-positive monocyte (CL:0002396) > non-classical monocyte (CL:0000875) > monocyte (CL:0000576) > mononuclear phagocyte (CL:0000113) > phagocyte (sensu Vertebrata) (CL:0000518) > phagocyte (CL:0000234) > motile cell (CL:0000219) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "CD4-positive, alpha-beta T cell", "species": "*", "cl_id": "CL:0000624", "cl_label": "CD4-positive, alpha-beta T cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "CD56bright NK cell", "species": "human", "cl_id": "CL:0000938", "cl_label": "CD16-negative, CD56-bright natural killer cell, human", "match": "close", "status": "proposed", "reviewer": null, "evidence": "CL term parallel to the documented CD56-dim mapping; human-specific; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "CD16-negative, CD56-bright natural killer cell, human (CL:0000938) > mature natural killer cell (CL:0000824) > natural killer cell (CL:0000623) > group 1 innate lymphoid cell (CL:0001067) > innate lymphoid cell (CL:0001065) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "CD56dim NK cell", "species": "human", "cl_id": "CL:0000939", "cl_label": "CD16-positive, CD56-dim natural killer cell, human", "match": "close", "status": "proposed", "reviewer": null, "evidence": "CL term is human-specific; do not apply to mouse", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "CD16-positive, CD56-dim natural killer cell, human (CL:0000939) > mature natural killer cell (CL:0000824) > natural killer cell (CL:0000623) > group 1 innate lymphoid cell (CL:0001067) > innate lymphoid cell (CL:0001065) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "CD8 TEMRA cell", "species": "*", "cl_id": "CL:0001062", "cl_label": "effector memory CD8-positive, alpha-beta T cell, terminally differentiated", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "effector memory CD8-positive, alpha-beta T cell, terminally differentiated (CL:0001062) > CD8-positive, alpha-beta memory T cell (CL:0000909) > CD8-positive, alpha-beta T cell (CL:0000625) > mature alpha-beta T cell (CL:0000791) > alpha-beta T cell (CL:0000789) > T cell (CL:0000084) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "CD8-positive, alpha-beta T cell", "species": "*", "cl_id": "CL:0000625", "cl_label": "CD8-positive, alpha-beta T cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "ILC2", "species": "*", "cl_id": "CL:0001069", "cl_label": "group 2 innate lymphoid cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "group 2 innate lymphoid cell (CL:0001069) > innate lymphoid cell (CL:0001065) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "ILC3", "species": "*", "cl_id": "CL:0001071", "cl_label": "group 3 innate lymphoid cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "group 3 innate lymphoid cell (CL:0001071) > innate lymphoid cell (CL:0001065) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "Kupffer cell", "species": "*", "cl_id": "CL:0000091", "cl_label": "Kupffer cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "LAMP5 interneuron", "species": "*", "cl_id": "CL:4023011", "cl_label": "lamp5 GABAergic interneuron", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "lamp5 GABAergic interneuron (CL:4023011) > caudal ganglionic eminence derived interneuron (CL:4023064) > cerebral cortex GABAergic interneuron (CL:0010011) > cortical interneuron (CL:0008031) > interneuron (CL:0000099) > central nervous system neuron (CL:2000029) > neuron (CL:0000540) > electrically responsive cell (CL:0000393) > electrically active cell (CL:0000211) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "LYVE1+ resident macrophage", "species": "human", "cl_id": "CL:0000864", "cl_label": "tissue-resident macrophage", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed; species split by gene casing (LYVE1=human)", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "tissue-resident macrophage (CL:0000864) > macrophage (CL:0000235) > mononuclear phagocyte (CL:0000113) > phagocyte (sensu Vertebrata) (CL:0000518) > phagocyte (CL:0000234) > motile cell (CL:0000219) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "Langerhans cell", "species": "*", "cl_id": "CL:0000453", "cl_label": "Langerhans cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "Lyve1+ resident macrophage", "species": "mouse", "cl_id": "CL:0000864", "cl_label": "tissue-resident macrophage", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed; species split by gene casing (Lyve1=mouse)", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "tissue-resident macrophage (CL:0000864) > macrophage (CL:0000235) > mononuclear phagocyte (CL:0000113) > phagocyte (sensu Vertebrata) (CL:0000518) > phagocyte (CL:0000234) > motile cell (CL:0000219) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "MAIT cell", "species": "*", "cl_id": "CL:0000940", "cl_label": "mucosal-associated invariant T cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "mucosal-associated invariant T cell (CL:0000940) > mature alpha-beta T cell (CL:0000791) > alpha-beta T cell (CL:0000789) > T cell (CL:0000084) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "NK cell", "species": "*", "cl_id": "CL:0000623", "cl_label": "natural killer cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "PVALB interneuron", "species": "*", "cl_id": "CL:4023018", "cl_label": "pvalb GABAergic interneuron", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "pvalb GABAergic interneuron (CL:4023018) > GABAergic interneuron (CL:0011005) > inhibitory interneuron (CL:0000498) > interneuron (CL:0000099) > central nervous system neuron (CL:2000029) > neuron (CL:0000540) > electrically responsive cell (CL:0000393) > electrically active cell (CL:0000211) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "Paneth cell", "species": "*", "cl_id": "CL:0000510", "cl_label": "paneth cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "paneth cell (CL:0000510) > glandular secretory epithelial cell (CL:0000150) > secretory epithelial cell (CL:1100001) > epithelial cell (CL:0000066) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "SST interneuron", "species": "*", "cl_id": "CL:4023017", "cl_label": "sst GABAergic interneuron", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "sst GABAergic interneuron (CL:4023017) > medial ganglionic eminence derived GABAergic interneuron (CL:4023069) > cerebral cortex GABAergic interneuron (CL:0010011) > cortical interneuron (CL:0008031) > interneuron (CL:0000099) > central nervous system neuron (CL:2000029) > neuron (CL:0000540) > electrically responsive cell (CL:0000393) > electrically active cell (CL:0000211) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "T cell", "species": "*", "cl_id": "CL:0000084", "cl_label": "T cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "T follicular helper cell", "species": "*", "cl_id": "CL:0002038", "cl_label": "T follicular helper cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "T-zone reticular cell", "species": "*", "cl_id": "CL:0009105", "cl_label": "T cell zone reticular cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "T cell zone reticular cell (CL:0009105) > lymph node fibroblastic reticular cell (CL:0009102) > fibroblastic reticular cell (CL:0009101) > myofibroblast cell (CL:0000186) > contractile cell (CL:0000183) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "VIP interneuron", "species": "*", "cl_id": "CL:4023016", "cl_label": "VIP GABAergic interneuron", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "VIP GABAergic interneuron (CL:4023016) > caudal ganglionic eminence derived interneuron (CL:4023064) > cerebral cortex GABAergic interneuron (CL:0010011) > cortical interneuron (CL:0008031) > interneuron (CL:0000099) > central nervous system neuron (CL:2000029) > neuron (CL:0000540) > electrically responsive cell (CL:0000393) > electrically active cell (CL:0000211) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "adventitial fibroblast", "species": "*", "cl_id": "CL:4028006", "cl_label": "alveolar adventitial fibroblast", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "alveolar adventitial fibroblast (CL:4028006) > pulmonary interstitial fibroblast (CL:0002241) > fibroblast (CL:0000057) > stromal cell (CL:0000499) > connective tissue cell (CL:0002320) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "aerocyte capillary endothelial cell", "species": "human", "cl_id": "CL:4028003", "cl_label": "alveolar capillary type 2 endothelial cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "popV paper Fig.2e legend: CL term for capillary aerocytes", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "alveolar capillary type 2 endothelial cell (CL:4028003) > pulmonary capillary endothelial cell (CL:4028001) > capillary endothelial cell (CL:0002144) > squamous endothelial cell (CL:0002653) > endothelial cell (CL:0000115) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "alveolar fibroblast", "species": "*", "cl_id": "CL:4028004", "cl_label": "alveolar type 1 fibroblast cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "alveolar type 1 fibroblast cell (CL:4028004) > pulmonary interstitial fibroblast (CL:0002241) > fibroblast (CL:0000057) > stromal cell (CL:0000499) > connective tissue cell (CL:0002320) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "alveolar macrophage", "species": "*", "cl_id": "CL:0000583", "cl_label": "alveolar macrophage", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "arterial endothelial cell", "species": "*", "cl_id": "CL:1000413", "cl_label": "endothelial cell of artery", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "endothelial cell of artery (CL:1000413) > blood vessel endothelial cell (CL:0000071) > endothelial cell of vascular tree (CL:0002139) > endothelial cell (CL:0000115) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "astrocyte", "species": "*", "cl_id": "CL:0000127", "cl_label": "astrocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
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+ {"map_version": "annotune-clmap-0.5", "raw_label": "basal cell", "species": "*", "cl_id": "CL:0002633", "cl_label": "respiratory basal cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
32
+ {"map_version": "annotune-clmap-0.5", "raw_label": "basal keratinocyte", "species": "*", "cl_id": "CL:0002187", "cl_label": "basal cell of epidermis", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "basal cell of epidermis (CL:0002187) > basal cell (CL:0000646) > epithelial fate stem cell (CL:0000036) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
33
+ {"map_version": "annotune-clmap-0.5", "raw_label": "basophil", "species": "*", "cl_id": "CL:0000767", "cl_label": "basophil", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
34
+ {"map_version": "annotune-clmap-0.5", "raw_label": "border-associated macrophage", "species": "*", "cl_id": "CL:4042003", "cl_label": "border associated macrophage", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "border associated macrophage (CL:4042003) > central nervous system macrophage (CL:0000878) > tissue-resident macrophage (CL:0000864) > macrophage (CL:0000235) > mononuclear phagocyte (CL:0000113) > phagocyte (sensu Vertebrata) (CL:0000518) > phagocyte (CL:0000234) > motile cell (CL:0000219) > cell (CL:0000000)"}
35
+ {"map_version": "annotune-clmap-0.5", "raw_label": "brain endothelial cell", "species": "*", "cl_id": "CL:2000044", "cl_label": "brain microvascular endothelial cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "brain microvascular endothelial cell (CL:2000044) > neural cell (CL:0002319) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
36
+ {"map_version": "annotune-clmap-0.5", "raw_label": "brain pericyte", "species": "*", "cl_id": "CL:2000043", "cl_label": "brain pericyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
37
+ {"map_version": "annotune-clmap-0.5", "raw_label": "cDC1", "species": "human", "cl_id": "CL:0002394", "cl_label": "CD141-positive myeloid dendritic cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; species-specific; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "CD141-positive myeloid dendritic cell (CL:0002394) > myeloid dendritic cell (CL:0000782) > myeloid leukocyte (CL:0000766) > leukocyte (CL:0000738) > motile cell (CL:0000219) > cell (CL:0000000)"}
38
+ {"map_version": "annotune-clmap-0.5", "raw_label": "cDC1", "species": "mouse", "cl_id": "CL:0001000", "cl_label": "CD8-alpha-positive CD11b-negative dendritic cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; species-specific; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "CD8-alpha-positive CD11b-negative dendritic cell (CL:0001000) > myeloid leukocyte (CL:0000766) > leukocyte (CL:0000738) > motile cell (CL:0000219) > cell (CL:0000000)"}
39
+ {"map_version": "annotune-clmap-0.5", "raw_label": "cDC2", "species": "human", "cl_id": "CL:0002399", "cl_label": "CD1c-positive myeloid dendritic cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; species-specific; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "CD1c-positive myeloid dendritic cell (CL:0002399) > myeloid dendritic cell (CL:0000782) > myeloid leukocyte (CL:0000766) > leukocyte (CL:0000738) > motile cell (CL:0000219) > cell (CL:0000000)"}
40
+ {"map_version": "annotune-clmap-0.5", "raw_label": "cDC2", "species": "mouse", "cl_id": "CL:0002465", "cl_label": "CD11b-positive dendritic cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; species-specific; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "CD11b-positive dendritic cell (CL:0002465) > conventional dendritic cell (CL:0000990) > dendritic cell (CL:0000451) > mononuclear phagocyte (CL:0000113) > phagocyte (sensu Vertebrata) (CL:0000518) > phagocyte (CL:0000234) > motile cell (CL:0000219) > cell (CL:0000000)"}
41
+ {"map_version": "annotune-clmap-0.5", "raw_label": "cardiomyocyte", "species": "*", "cl_id": "CL:0000746", "cl_label": "cardiac muscle cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "cardiac muscle cell (CL:0000746) > striated muscle cell (CL:0000737) > muscle cell (CL:0000187) > contractile cell (CL:0000183) > cell (CL:0000000)"}
42
+ {"map_version": "annotune-clmap-0.5", "raw_label": "cholangiocyte", "species": "*", "cl_id": "CL:1000488", "cl_label": "cholangiocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
43
+ {"map_version": "annotune-clmap-0.5", "raw_label": "ciliated cell", "species": "*", "cl_id": "CL:1000271", "cl_label": "lung multiciliated epithelial cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
44
+ {"map_version": "annotune-clmap-0.5", "raw_label": "classical monocyte", "species": "*", "cl_id": "CL:0000860", "cl_label": "classical monocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
45
+ {"map_version": "annotune-clmap-0.5", "raw_label": "club cell", "species": "*", "cl_id": "CL:0000158", "cl_label": "club cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
46
+ {"map_version": "annotune-clmap-0.5", "raw_label": "collecting duct intercalated cell", "species": "*", "cl_id": "CL:0005010", "cl_label": "renal intercalated cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "renal intercalated cell (CL:0005010) > columnar/cuboidal epithelial cell (CL:0000075) > epithelial cell (CL:0000066) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
47
+ {"map_version": "annotune-clmap-0.5", "raw_label": "colonocyte", "species": "*", "cl_id": "CL:1000347", "cl_label": "colonocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
48
+ {"map_version": "annotune-clmap-0.5", "raw_label": "distal convoluted tubule cell", "species": "*", "cl_id": "CL:1000849", "cl_label": "kidney distal convoluted tubule epithelial cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "kidney distal convoluted tubule epithelial cell (CL:1000849) > epithelial cell of distal tubule (CL:0002305) > meso-epithelial cell (CL:0002078) > epithelial cell (CL:0000066) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
49
+ {"map_version": "annotune-clmap-0.5", "raw_label": "effector memory CD8 T cell", "species": "*", "cl_id": "CL:0000913", "cl_label": "effector memory CD8-positive, alpha-beta T cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "effector memory CD8-positive, alpha-beta T cell (CL:0000913) > CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL:0001203) > CD8-positive, alpha-beta memory T cell (CL:0000909) > CD8-positive, alpha-beta T cell (CL:0000625) > mature alpha-beta T cell (CL:0000791) > alpha-beta T cell (CL:0000789) > T cell (CL:0000084) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
50
+ {"map_version": "annotune-clmap-0.5", "raw_label": "endothelial cell", "species": "*", "cl_id": "CL:0000115", "cl_label": "endothelial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
51
+ {"map_version": "annotune-clmap-0.5", "raw_label": "enterocyte", "species": "*", "cl_id": "CL:0000584", "cl_label": "enterocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
52
+ {"map_version": "annotune-clmap-0.5", "raw_label": "enteroendocrine cell", "species": "*", "cl_id": "CL:0000164", "cl_label": "enteroendocrine cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
53
+ {"map_version": "annotune-clmap-0.5", "raw_label": "ependymal cell", "species": "*", "cl_id": "CL:0000065", "cl_label": "ependymal cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
54
+ {"map_version": "annotune-clmap-0.5", "raw_label": "erythroblast", "species": "*", "cl_id": "CL:0000765", "cl_label": "erythroblast", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
55
+ {"map_version": "annotune-clmap-0.5", "raw_label": "erythrocyte", "species": "*", "cl_id": "CL:0000232", "cl_label": "erythrocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
56
+ {"map_version": "annotune-clmap-0.5", "raw_label": "excitatory neuron", "species": "*", "cl_id": "CL:0000679", "cl_label": "glutamatergic neuron", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "glutamatergic neuron (CL:0000679) > secretory cell (CL:0000151) > cell (CL:0000000)"}
57
+ {"map_version": "annotune-clmap-0.5", "raw_label": "exhausted CD8 T cell", "species": "*", "cl_id": "CL:0020031", "cl_label": "CD8-positive exhausted alpha-beta T cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "CL label synonym-level match (CD8-positive exhausted alpha-beta T cell); proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "CD8-positive exhausted alpha-beta T cell (CL:0020031) > CD8-positive, alpha-beta T cell (CL:0000625) > mature alpha-beta T cell (CL:0000791) > alpha-beta T cell (CL:0000789) > T cell (CL:0000084) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
58
+ {"map_version": "annotune-clmap-0.5", "raw_label": "fibroblast", "species": "*", "cl_id": "CL:0000057", "cl_label": "fibroblast", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
59
+ {"map_version": "annotune-clmap-0.5", "raw_label": "follicular dendritic cell", "species": "*", "cl_id": "CL:0000442", "cl_label": "follicular dendritic cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
60
+ {"map_version": "annotune-clmap-0.5", "raw_label": "gamma-delta T cell", "species": "*", "cl_id": "CL:0000798", "cl_label": "gamma-delta T cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
61
+ {"map_version": "annotune-clmap-0.5", "raw_label": "general capillary endothelial cell", "species": "*", "cl_id": "CL:4028002", "cl_label": "alveolar capillary type 1 endothelial cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "alveolar capillary type 1 endothelial cell (CL:4028002) > pulmonary capillary endothelial cell (CL:4028001) > capillary endothelial cell (CL:0002144) > squamous endothelial cell (CL:0002653) > endothelial cell (CL:0000115) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
62
+ {"map_version": "annotune-clmap-0.5", "raw_label": "germinal center B cell", "species": "*", "cl_id": "CL:0000844", "cl_label": "germinal center B cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
63
+ {"map_version": "annotune-clmap-0.5", "raw_label": "granulocyte-monocyte progenitor", "species": "*", "cl_id": "CL:0000557", "cl_label": "granulocyte monocyte progenitor cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "granulocyte monocyte progenitor cell (CL:0000557) > myeloid cell (CL:0000763) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
64
+ {"map_version": "annotune-clmap-0.5", "raw_label": "hematopoietic stem and progenitor cell", "species": "*", "cl_id": "CL:0008001", "cl_label": "hematopoietic precursor cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "hematopoietic precursor cell (CL:0008001) > hematopoietic cell (CL:0000988) > cell (CL:0000000)"}
65
+ {"map_version": "annotune-clmap-0.5", "raw_label": "hepatic stellate cell", "species": "*", "cl_id": "CL:0000632", "cl_label": "hepatic stellate cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
66
+ {"map_version": "annotune-clmap-0.5", "raw_label": "hepatocyte", "species": "*", "cl_id": "CL:0000182", "cl_label": "hepatocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
67
+ {"map_version": "annotune-clmap-0.5", "raw_label": "inhibitory neuron", "species": "*", "cl_id": "CL:0000617", "cl_label": "GABAergic neuron", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "GABAergic neuron (CL:0000617) > secretory cell (CL:0000151) > cell (CL:0000000)"}
68
+ {"map_version": "annotune-clmap-0.5", "raw_label": "innate lymphoid cell", "species": "*", "cl_id": "CL:0001065", "cl_label": "innate lymphoid cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
69
+ {"map_version": "annotune-clmap-0.5", "raw_label": "interstitial macrophage", "species": "*", "cl_id": "CL:4033043", "cl_label": "lung interstitial macrophage", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "lung interstitial macrophage (CL:4033043) > tissue-resident macrophage (CL:0000864) > macrophage (CL:0000235) > mononuclear phagocyte (CL:0000113) > phagocyte (sensu Vertebrata) (CL:0000518) > phagocyte (CL:0000234) > motile cell (CL:0000219) > cell (CL:0000000)"}
70
+ {"map_version": "annotune-clmap-0.5", "raw_label": "intestinal stem cell", "species": "*", "cl_id": "CL:0002250", "cl_label": "intestinal crypt stem cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "intestinal crypt stem cell (CL:0002250) > multi fate stem cell (CL:0000048) > stem cell (CL:0000034) > precursor cell (CL:0011115) > cell (CL:0000000)"}
71
+ {"map_version": "annotune-clmap-0.5", "raw_label": "intestine goblet cell", "species": "*", "cl_id": "CL:0019031", "cl_label": "intestine goblet cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
72
+ {"map_version": "annotune-clmap-0.5", "raw_label": "ionocyte", "species": "*", "cl_id": "CL:0017000", "cl_label": "pulmonary ionocyte", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
73
+ {"map_version": "annotune-clmap-0.5", "raw_label": "liver sinusoidal endothelial cell", "species": "*", "cl_id": "CL:1000398", "cl_label": "endothelial cell of hepatic sinusoid", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "endothelial cell of hepatic sinusoid (CL:1000398) > fenestrated endothelial cell (CL:0000666) > endothelial cell (CL:0000115) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
74
+ {"map_version": "annotune-clmap-0.5", "raw_label": "lung goblet cell", "species": "*", "cl_id": "CL:1000143", "cl_label": "lung goblet cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
75
+ {"map_version": "annotune-clmap-0.5", "raw_label": "lymphatic endothelial cell", "species": "*", "cl_id": "CL:0002138", "cl_label": "endothelial cell of lymphatic vessel", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "endothelial cell of lymphatic vessel (CL:0002138) > endothelial cell of vascular tree (CL:0002139) > endothelial cell (CL:0000115) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
76
+ {"map_version": "annotune-clmap-0.5", "raw_label": "marginal zone B cell", "species": "*", "cl_id": "CL:0000845", "cl_label": "marginal zone B cell of spleen", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "marginal zone B cell of spleen (CL:0000845) > mature B cell (CL:0000785) > professional antigen presenting cell (CL:0000145) > leukocyte (CL:0000738) > motile cell (CL:0000219) > cell (CL:0000000)"}
77
+ {"map_version": "annotune-clmap-0.5", "raw_label": "mast cell", "species": "*", "cl_id": "CL:0000097", "cl_label": "mast cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
78
+ {"map_version": "annotune-clmap-0.5", "raw_label": "mature regulatory dendritic cell", "species": "*", "cl_id": "CL:4047054", "cl_label": "migratory dendritic cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
79
+ {"map_version": "annotune-clmap-0.5", "raw_label": "megakaryocyte", "species": "*", "cl_id": "CL:0000556", "cl_label": "megakaryocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
80
+ {"map_version": "annotune-clmap-0.5", "raw_label": "megakaryocyte-erythroid progenitor", "species": "*", "cl_id": "CL:0000050", "cl_label": "megakaryocyte-erythroid progenitor cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "megakaryocyte-erythroid progenitor cell (CL:0000050) > myeloid cell (CL:0000763) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
81
+ {"map_version": "annotune-clmap-0.5", "raw_label": "melanocyte", "species": "*", "cl_id": "CL:0000148", "cl_label": "melanocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
82
+ {"map_version": "annotune-clmap-0.5", "raw_label": "memory B cell", "species": "*", "cl_id": "CL:0000787", "cl_label": "memory B cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
83
+ {"map_version": "annotune-clmap-0.5", "raw_label": "memory CD4 T cell", "species": "*", "cl_id": "CL:0000897", "cl_label": "CD4-positive, alpha-beta memory T cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "CD4-positive, alpha-beta memory T cell (CL:0000897) > CD4-positive, alpha-beta T cell (CL:0000624) > mature alpha-beta T cell (CL:0000791) > alpha-beta T cell (CL:0000789) > T cell (CL:0000084) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
84
+ {"map_version": "annotune-clmap-0.5", "raw_label": "mesothelial cell", "species": "*", "cl_id": "CL:0000077", "cl_label": "mesothelial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
85
+ {"map_version": "annotune-clmap-0.5", "raw_label": "microglial cell", "species": "*", "cl_id": "CL:0000129", "cl_label": "microglial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
86
+ {"map_version": "annotune-clmap-0.5", "raw_label": "monocyte", "species": "*", "cl_id": "CL:0000576", "cl_label": "monocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
87
+ {"map_version": "annotune-clmap-0.5", "raw_label": "naive B cell", "species": "*", "cl_id": "CL:0000788", "cl_label": "naive B cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
88
+ {"map_version": "annotune-clmap-0.5", "raw_label": "naive CD4 T cell", "species": "*", "cl_id": "CL:0000895", "cl_label": "naive thymus-derived CD4-positive, alpha-beta T cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "naive thymus-derived CD4-positive, alpha-beta T cell (CL:0000895) > CD4-positive, alpha-beta T cell (CL:0000624) > mature alpha-beta T cell (CL:0000791) > alpha-beta T cell (CL:0000789) > T cell (CL:0000084) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
89
+ {"map_version": "annotune-clmap-0.5", "raw_label": "naive CD8 T cell", "species": "*", "cl_id": "CL:0000900", "cl_label": "naive thymus-derived CD8-positive, alpha-beta T cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "naive thymus-derived CD8-positive, alpha-beta T cell (CL:0000900) > CD8-positive, alpha-beta T cell (CL:0000625) > mature alpha-beta T cell (CL:0000791) > alpha-beta T cell (CL:0000789) > T cell (CL:0000084) > lymphocyte (CL:0000542) > mononuclear leukocyte (CL:0000842) > single nucleate cell (CL:0000226) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
90
+ {"map_version": "annotune-clmap-0.5", "raw_label": "naive T cell", "species": "*", "cl_id": "CL:0000898", "cl_label": "naive T cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
91
+ {"map_version": "annotune-clmap-0.5", "raw_label": "neutrophil", "species": "*", "cl_id": "CL:0000775", "cl_label": "neutrophil", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
92
+ {"map_version": "annotune-clmap-0.5", "raw_label": "non-classical monocyte", "species": "*", "cl_id": "CL:0000875", "cl_label": "non-classical monocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
93
+ {"map_version": "annotune-clmap-0.5", "raw_label": "oligodendrocyte", "species": "*", "cl_id": "CL:0000128", "cl_label": "oligodendrocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
94
+ {"map_version": "annotune-clmap-0.5", "raw_label": "oligodendrocyte precursor cell", "species": "*", "cl_id": "CL:0002453", "cl_label": "oligodendrocyte precursor cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
95
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pancreatic PP cell", "species": "*", "cl_id": "CL:0002275", "cl_label": "pancreatic PP cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
96
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pancreatic acinar cell", "species": "*", "cl_id": "CL:0002064", "cl_label": "pancreatic acinar cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
97
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pancreatic alpha cell", "species": "*", "cl_id": "CL:0000171", "cl_label": "pancreatic A cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "pancreatic A cell (CL:0000171) > type A enteroendocrine cell (CL:0002067) > enteroendocrine cell (CL:0000164) > endocrine cell (CL:0000163) > secretory cell (CL:0000151) > cell (CL:0000000)"}
98
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pancreatic beta cell", "species": "*", "cl_id": "CL:0000169", "cl_label": "type B pancreatic cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "type B pancreatic cell (CL:0000169) > insulin secreting cell (CL:0000168) > protein secreting cell (CL:0000154) > secretory cell (CL:0000151) > cell (CL:0000000)"}
99
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pancreatic delta cell", "species": "*", "cl_id": "CL:0000173", "cl_label": "pancreatic D cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "pancreatic D cell (CL:0000173) > type D enteroendocrine cell (CL:0000502) > enteroendocrine cell (CL:0000164) > endocrine cell (CL:0000163) > secretory cell (CL:0000151) > cell (CL:0000000)"}
100
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pancreatic ductal cell", "species": "*", "cl_id": "CL:0002079", "cl_label": "pancreatic ductal cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
101
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pericyte", "species": "*", "cl_id": "CL:0000669", "cl_label": "pericyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
102
+ {"map_version": "annotune-clmap-0.5", "raw_label": "plasma cell", "species": "*", "cl_id": "CL:0000786", "cl_label": "plasma cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
103
+ {"map_version": "annotune-clmap-0.5", "raw_label": "plasmacytoid dendritic cell", "species": "*", "cl_id": "CL:0000784", "cl_label": "plasmacytoid dendritic cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
104
+ {"map_version": "annotune-clmap-0.5", "raw_label": "platelet", "species": "*", "cl_id": "CL:0000233", "cl_label": "platelet", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
105
+ {"map_version": "annotune-clmap-0.5", "raw_label": "podocyte", "species": "*", "cl_id": "CL:0000653", "cl_label": "podocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
106
+ {"map_version": "annotune-clmap-0.5", "raw_label": "proximal tubule cell", "species": "*", "cl_id": "CL:0002306", "cl_label": "epithelial cell of proximal tubule", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "epithelial cell of proximal tubule (CL:0002306) > meso-epithelial cell (CL:0002078) > epithelial cell (CL:0000066) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
107
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pulmonary alveolar type 1 cell", "species": "*", "cl_id": "CL:0002062", "cl_label": "pulmonary alveolar type 1 cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
108
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pulmonary alveolar type 2 cell", "species": "*", "cl_id": "CL:0002063", "cl_label": "pulmonary alveolar type 2 cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
109
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pulmonary neuroendocrine cell", "species": "*", "cl_id": "CL:1000223", "cl_label": "pulmonary neuroendocrine cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match; name updated in CL v2026-06-08; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
110
+ {"map_version": "annotune-clmap-0.5", "raw_label": "red pulp macrophage", "species": "*", "cl_id": "CL:0000874", "cl_label": "splenic red pulp macrophage", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "splenic red pulp macrophage (CL:0000874) > splenic macrophage (CL:0000871) > secondary lymphoid organ macrophage (CL:0000867) > tissue-resident macrophage (CL:0000864) > macrophage (CL:0000235) > mononuclear phagocyte (CL:0000113) > phagocyte (sensu Vertebrata) (CL:0000518) > phagocyte (CL:0000234) > motile cell (CL:0000219) > cell (CL:0000000)"}
111
+ {"map_version": "annotune-clmap-0.5", "raw_label": "regulatory T cell", "species": "*", "cl_id": "CL:0000792", "cl_label": "CD4-positive, CD25-positive, alpha-beta regulatory T cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
112
+ {"map_version": "annotune-clmap-0.5", "raw_label": "smooth muscle cell", "species": "*", "cl_id": "CL:0000192", "cl_label": "smooth muscle cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
113
+ {"map_version": "annotune-clmap-0.5", "raw_label": "suprabasal keratinocyte", "species": "*", "cl_id": "CL:4033013", "cl_label": "suprabasal keratinocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
114
+ {"map_version": "annotune-clmap-0.5", "raw_label": "thick ascending limb cell", "species": "*", "cl_id": "CL:1001106", "cl_label": "kidney loop of Henle thick ascending limb epithelial cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "kidney loop of Henle thick ascending limb epithelial cell (CL:1001106) > kidney medulla cell (CL:1000504) > kidney cell (CL:1000497) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
115
+ {"map_version": "annotune-clmap-0.5", "raw_label": "tuft cell", "species": "*", "cl_id": "CL:0002204", "cl_label": "tuft cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match; name updated in CL v2026-06-08; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
116
+ {"map_version": "annotune-clmap-0.5", "raw_label": "vascular leptomeningeal cell", "species": "*", "cl_id": "CL:4023051", "cl_label": "vascular leptomeningeal cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
117
+ {"map_version": "annotune-clmap-0.5", "raw_label": "venous endothelial cell", "species": "*", "cl_id": "CL:0002543", "cl_label": "vein endothelial cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "vein endothelial cell (CL:0002543) > blood vessel endothelial cell (CL:0000071) > endothelial cell of vascular tree (CL:0002139) > endothelial cell (CL:0000115) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
118
+ {"map_version": "annotune-clmap-0.5", "raw_label": "collecting duct principal cell", "species": "*", "cl_id": "CL:1001431", "cl_label": "kidney collecting duct principal cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "added to cover markers.tsv row; dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "kidney collecting duct principal cell (CL:1001431) > renal principal cell (CL:0005009) > columnar/cuboidal epithelial cell (CL:0000075) > epithelial cell (CL:0000066) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
119
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "satellite glial cell", "cl_id": "CL:0000516", "cl_label": "perineuronal satellite cell", "match": "close", "evidence": "dictionary name for perineuronal satellite cell; proposed, not reviewed"}
120
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "myelinating Schwann cell", "cl_id": "CL:0000218", "cl_label": "myelinating Schwann cell", "match": "exact", "evidence": "CL label match"}
121
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "non-myelinating Schwann cell", "cl_id": "CL:0002376", "cl_label": "non-myelinating Schwann cell", "match": "exact", "evidence": "CL label match"}
122
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "sensory neuron", "cl_id": "CL:1001451", "cl_label": "sensory neuron of dorsal root ganglion", "match": "close", "evidence": "DRG page name for sensory neuron of dorsal root ganglion; proposed, not reviewed"}
123
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "peptidergic nociceptor", "cl_id": "CL:4033176", "cl_label": "dorsal root ganglion CGRP neuron", "match": "close", "evidence": "DRG page name for dorsal root ganglion CGRP neuron; proposed, not reviewed"}
124
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "non-peptidergic nociceptor", "cl_id": "CL:4033182", "cl_label": "dorsal root ganglion RET neuron", "match": "close", "evidence": "DRG page name for dorsal root ganglion RET neuron; proposed, not reviewed"}
125
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "large diameter sensory neuron", "cl_id": "CL:1001451", "cl_label": "sensory neuron of dorsal root ganglion", "match": "close", "evidence": "no separate CL child; mapped to sensory neuron of dorsal root ganglion; proposed, not reviewed"}
126
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "proprioceptive neuron", "cl_id": "CL:1001451", "cl_label": "sensory neuron of dorsal root ganglion", "match": "close", "evidence": "no separate CL child; mapped to sensory neuron of dorsal root ganglion; proposed, not reviewed"}
127
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "C-LTMR", "cl_id": "CL:1001451", "cl_label": "sensory neuron of dorsal root ganglion", "match": "close", "evidence": "no separate CL child; mapped to sensory neuron of dorsal root ganglion; proposed, not reviewed"}
128
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "osteocyte", "cl_id": "CL:0000137", "cl_label": "osteocyte", "match": "exact", "evidence": "CL label match"}
129
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "brown adipocyte", "cl_id": "CL:0000449", "cl_label": "brown adipocyte", "match": "exact", "evidence": "CL label match"}
130
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "preadipocyte", "cl_id": "CL:0002334", "cl_label": "preadipocyte", "match": "exact", "evidence": "CL label match"}
131
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "endocardial cell", "cl_id": "CL:0002350", "cl_label": "endocardial cell", "match": "exact", "evidence": "CL label match"}
132
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "sebocyte", "cl_id": "CL:0002140", "cl_label": "skin sebocyte", "match": "close", "evidence": "dictionary name for skin sebocyte; proposed, not reviewed"}
133
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "enterochromaffin-like cell", "cl_id": "CL:0000504", "cl_label": "enterochromaffin-like cell", "match": "exact", "evidence": "CL label match"}
134
+ {"map_version": "annotune-clmap-0.5", "species": "*", "status": "proposed", "reviewer": null, "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "raw_label": "pancreatic stellate cell", "cl_id": "CL:0002410", "cl_label": "pancreatic stellate cell", "match": "exact", "evidence": "CL label match"}
135
+ {"map_version": "annotune-clmap-0.5", "raw_label": "adipocyte", "species": "*", "cl_id": "CL:0000136", "cl_label": "adipocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "CL label match", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
136
+ {"map_version": "annotune-clmap-0.5", "raw_label": "M cell of gut", "species": "*", "cl_id": "CL:0000682", "cl_label": "M cell of gut", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
137
+ {"map_version": "annotune-clmap-0.5", "raw_label": "cardiac fibroblast", "species": "*", "cl_id": "CL:0002548", "cl_label": "fibroblast of cardiac tissue", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
138
+ {"map_version": "annotune-clmap-0.5", "raw_label": "chondrocyte", "species": "*", "cl_id": "CL:0000138", "cl_label": "chondrocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
139
+ {"map_version": "annotune-clmap-0.5", "raw_label": "foveolar cell", "species": "*", "cl_id": "CL:0002179", "cl_label": "foveolar cell of stomach", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
140
+ {"map_version": "annotune-clmap-0.5", "raw_label": "gastric chief cell", "species": "*", "cl_id": "CL:0000155", "cl_label": "peptic cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
141
+ {"map_version": "annotune-clmap-0.5", "raw_label": "hypertrophic chondrocyte", "species": "*", "cl_id": "CL:0000743", "cl_label": "hypertrophic chondrocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
142
+ {"map_version": "annotune-clmap-0.5", "raw_label": "mesangial cell", "species": "*", "cl_id": "CL:0000650", "cl_label": "mesangial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
143
+ {"map_version": "annotune-clmap-0.5", "raw_label": "mucous neck cell", "species": "*", "cl_id": "CL:0002181", "cl_label": "mucous neck cell of gastric gland", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
144
+ {"map_version": "annotune-clmap-0.5", "raw_label": "osteoblast", "species": "*", "cl_id": "CL:0000062", "cl_label": "osteoblast", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
145
+ {"map_version": "annotune-clmap-0.5", "raw_label": "osteoclast", "species": "*", "cl_id": "CL:0000092", "cl_label": "osteoclast", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
146
+ {"map_version": "annotune-clmap-0.5", "raw_label": "parietal cell", "species": "*", "cl_id": "CL:0000162", "cl_label": "parietal cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
147
+ {"map_version": "annotune-clmap-0.5", "raw_label": "regular atrial cardiac myocyte", "species": "*", "cl_id": "CL:0002129", "cl_label": "regular atrial cardiac myocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
148
+ {"map_version": "annotune-clmap-0.5", "raw_label": "regular ventricular cardiac myocyte", "species": "*", "cl_id": "CL:0002131", "cl_label": "regular ventricular cardiac myocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
149
+ {"map_version": "annotune-clmap-0.5", "raw_label": "skeletal muscle fiber", "species": "*", "cl_id": "CL:0008002", "cl_label": "skeletal muscle fiber", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
150
+ {"map_version": "annotune-clmap-0.5", "raw_label": "skeletal muscle satellite cell", "species": "*", "cl_id": "CL:0000594", "cl_label": "skeletal muscle satellite cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
151
+ {"map_version": "annotune-clmap-0.5", "raw_label": "superficial zone articular chondrocyte", "species": "*", "cl_id": "CL:0020037", "cl_label": "superficial zone articular chondrocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
152
+ {"map_version": "annotune-clmap-0.5", "raw_label": "tenocyte", "species": "*", "cl_id": "CL:0000388", "cl_label": "tendon cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
153
+ {"map_version": "annotune-clmap-0.5", "raw_label": "tuft cell of stomach", "species": "*", "cl_id": "CL:4052040", "cl_label": "tuft cell of stomach", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
154
+ {"map_version": "annotune-clmap-0.5", "raw_label": "type D cell of stomach", "species": "*", "cl_id": "CL:0002267", "cl_label": "type D cell of stomach", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
155
+ {"map_version": "annotune-clmap-0.5", "raw_label": "type G cell of stomach", "species": "*", "cl_id": "CL:4047025", "cl_label": "type G cell of stomach", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
156
+ {"map_version": "annotune-clmap-0.5", "raw_label": "aerocyte capillary endothelial cell", "species": "mouse", "cl_id": "CL:4028003", "cl_label": "alveolar capillary type 2 endothelial cell", "match": "close", "status": "proposed", "reviewer": null, "evidence": "mouse marker dictionary uses the same CL:4028003 aCap term; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}, "cl_path": "alveolar capillary type 2 endothelial cell (CL:4028003) > pulmonary capillary endothelial cell (CL:4028001) > capillary endothelial cell (CL:0002144) > squamous endothelial cell (CL:0002653) > endothelial cell (CL:0000115) > eukaryotic cell (CL:0000255) > cell (CL:0000000)"}
157
+ {"map_version": "annotune-clmap-0.5", "raw_label": "glomerular capillary endothelial cell", "species": "*", "cl_id": "CL:1001005", "cl_label": "glomerular capillary endothelial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
158
+ {"map_version": "annotune-clmap-0.5", "raw_label": "macula densa epithelial cell", "species": "*", "cl_id": "CL:1000850", "cl_label": "macula densa epithelial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
159
+ {"map_version": "annotune-clmap-0.5", "raw_label": "pancreatic epsilon cell", "species": "*", "cl_id": "CL:0005019", "cl_label": "pancreatic epsilon cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
160
+ {"map_version": "annotune-clmap-0.5", "raw_label": "thyroid follicular cell", "species": "*", "cl_id": "CL:0002258", "cl_label": "thyroid follicular cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
161
+ {"map_version": "annotune-clmap-0.5", "raw_label": "parafollicular cell", "species": "*", "cl_id": "CL:0000570", "cl_label": "parafollicular cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
162
+ {"map_version": "annotune-clmap-0.5", "raw_label": "bladder urothelial cell", "species": "*", "cl_id": "CL:1001428", "cl_label": "bladder urothelial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
163
+ {"map_version": "annotune-clmap-0.5", "raw_label": "serous acinar cell of salivary gland", "species": "*", "cl_id": "CL:4052065", "cl_label": "serous acinar cell of salivary gland", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
164
+ {"map_version": "annotune-clmap-0.5", "raw_label": "mucous acinar cell of salivary gland", "species": "*", "cl_id": "CL:4052066", "cl_label": "mucous acinar cell of salivary gland", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
165
+ {"map_version": "annotune-clmap-0.5", "raw_label": "basal duct cell of salivary gland", "species": "*", "cl_id": "CL:0020060", "cl_label": "basal duct cell of salivary gland", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
166
+ {"map_version": "annotune-clmap-0.5", "raw_label": "myoepithelial cell of salivary gland", "species": "*", "cl_id": "CL:0020066", "cl_label": "myoepithelial cell of salivary gland", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
167
+ {"map_version": "annotune-clmap-0.5", "raw_label": "retinal rod cell", "species": "*", "cl_id": "CL:0000604", "cl_label": "retinal rod cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
168
+ {"map_version": "annotune-clmap-0.5", "raw_label": "retinal cone cell", "species": "*", "cl_id": "CL:0000573", "cl_label": "retinal cone cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
169
+ {"map_version": "annotune-clmap-0.5", "raw_label": "retinal bipolar neuron", "species": "*", "cl_id": "CL:0000748", "cl_label": "retinal bipolar neuron", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
170
+ {"map_version": "annotune-clmap-0.5", "raw_label": "retinal ganglion cell", "species": "*", "cl_id": "CL:0000740", "cl_label": "retinal ganglion cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
171
+ {"map_version": "annotune-clmap-0.5", "raw_label": "retinal pigment epithelial cell", "species": "*", "cl_id": "CL:0002586", "cl_label": "retinal pigment epithelial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
172
+ {"map_version": "annotune-clmap-0.5", "raw_label": "Sertoli cell", "species": "*", "cl_id": "CL:0000216", "cl_label": "Sertoli cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
173
+ {"map_version": "annotune-clmap-0.5", "raw_label": "Leydig cell", "species": "*", "cl_id": "CL:0000178", "cl_label": "Leydig cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
174
+ {"map_version": "annotune-clmap-0.5", "raw_label": "male germ cell", "species": "*", "cl_id": "CL:0000015", "cl_label": "male germ cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
175
+ {"map_version": "annotune-clmap-0.5", "raw_label": "granulosa cell", "species": "*", "cl_id": "CL:0000501", "cl_label": "granulosa cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
176
+ {"map_version": "annotune-clmap-0.5", "raw_label": "theca cell", "species": "*", "cl_id": "CL:0000503", "cl_label": "theca cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
177
+ {"map_version": "annotune-clmap-0.5", "raw_label": "oocyte", "species": "*", "cl_id": "CL:0000023", "cl_label": "oocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
178
+ {"map_version": "annotune-clmap-0.5", "raw_label": "basal-myoepithelial cell of mammary gland", "species": "*", "cl_id": "CL:0002324", "cl_label": "basal-myoepithelial cell of mammary gland", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
179
+ {"map_version": "annotune-clmap-0.5", "raw_label": "luminal epithelial cell of mammary gland", "species": "*", "cl_id": "CL:0002326", "cl_label": "luminal epithelial cell of mammary gland", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
180
+ {"map_version": "annotune-clmap-0.5", "raw_label": "luminal cell of prostate epithelium", "species": "*", "cl_id": "CL:0002340", "cl_label": "luminal cell of prostate epithelium", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
181
+ {"map_version": "annotune-clmap-0.5", "raw_label": "basal cell of prostate epithelium", "species": "*", "cl_id": "CL:0002341", "cl_label": "basal cell of prostate epithelium", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
182
+ {"map_version": "annotune-clmap-0.5", "raw_label": "glandular epithelial cell of endometrium", "species": "*", "cl_id": "CL:0009084", "cl_label": "glandular epithelial cell of endometrium", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
183
+ {"map_version": "annotune-clmap-0.5", "raw_label": "stromal cell of endometrium", "species": "*", "cl_id": "CL:0002255", "cl_label": "stromal cell of endometrium", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
184
+ {"map_version": "annotune-clmap-0.5", "raw_label": "Mueller cell", "species": "*", "cl_id": "CL:0000636", "cl_label": "Mueller cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
185
+ {"map_version": "annotune-clmap-0.5", "raw_label": "corneal epithelial cell", "species": "*", "cl_id": "CL:0000575", "cl_label": "corneal epithelial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
186
+ {"map_version": "annotune-clmap-0.5", "raw_label": "corneal endothelial cell", "species": "*", "cl_id": "CL:0000132", "cl_label": "corneal endothelial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
187
+ {"map_version": "annotune-clmap-0.5", "raw_label": "keratocyte", "species": "*", "cl_id": "CL:0002363", "cl_label": "keratocyte", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
188
+ {"map_version": "annotune-clmap-0.5", "raw_label": "cortical cell of adrenal gland", "species": "*", "cl_id": "CL:0002097", "cl_label": "cortical cell of adrenal gland", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
189
+ {"map_version": "annotune-clmap-0.5", "raw_label": "adrenal medulla chromaffin cell", "species": "*", "cl_id": "CL:0000336", "cl_label": "adrenal medulla chromaffin cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
190
+ {"map_version": "annotune-clmap-0.5", "raw_label": "mononuclear cytotrophoblast cell", "species": "human", "cl_id": "CL:0000523", "cl_label": "mononuclear cytotrophoblast cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
191
+ {"map_version": "annotune-clmap-0.5", "raw_label": "syncytiotrophoblast cell", "species": "human", "cl_id": "CL:0000525", "cl_label": "syncytiotrophoblast cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
192
+ {"map_version": "annotune-clmap-0.5", "raw_label": "extravillous trophoblast", "species": "human", "cl_id": "CL:0008036", "cl_label": "extravillous trophoblast", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
193
+ {"map_version": "annotune-clmap-0.5", "raw_label": "eosinophil", "species": "*", "cl_id": "CL:0000771", "cl_label": "eosinophil", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
194
+ {"map_version": "annotune-clmap-0.5", "raw_label": "epithelial cell of thymus", "species": "*", "cl_id": "CL:0002293", "cl_label": "epithelial cell of thymus", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
195
+ {"map_version": "annotune-clmap-0.5", "raw_label": "enteric neuron", "species": "*", "cl_id": "CL:0007011", "cl_label": "enteric neuron", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
196
+ {"map_version": "annotune-clmap-0.5", "raw_label": "mesothelial cell of epicardium", "species": "*", "cl_id": "CL:0011019", "cl_label": "mesothelial cell of epicardium", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
197
+ {"map_version": "annotune-clmap-0.5", "raw_label": "interstitial cell of Cajal", "species": "*", "cl_id": "CL:0002088", "cl_label": "interstitial cell of Cajal", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}
198
+ {"map_version": "annotune-clmap-0.5", "raw_label": "parietal epithelial cell", "species": "*", "cl_id": "CL:1000452", "cl_label": "parietal epithelial cell", "match": "exact", "status": "proposed", "reviewer": null, "evidence": "dictionary markers.tsv cl_id; proposed, not reviewed", "ontology": {"name": "Cell Ontology cl-basic.obo", "release": "v2026-06-08", "sha256": "73996c6349283e7a8cbd8183367a1cb810d0077e9c291ae0c72bd31e869f8c1c"}}