anemoi-datasets 0.5.7__py3-none-any.whl → 0.5.11__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- anemoi/datasets/__init__.py +11 -3
- anemoi/datasets/__main__.py +2 -3
- anemoi/datasets/_version.py +2 -2
- anemoi/datasets/commands/__init__.py +2 -3
- anemoi/datasets/commands/cleanup.py +9 -0
- anemoi/datasets/commands/compare.py +3 -3
- anemoi/datasets/commands/copy.py +38 -68
- anemoi/datasets/commands/create.py +20 -5
- anemoi/datasets/commands/finalise-additions.py +9 -0
- anemoi/datasets/commands/finalise.py +9 -0
- anemoi/datasets/commands/init-additions.py +9 -0
- anemoi/datasets/commands/init.py +9 -0
- anemoi/datasets/commands/inspect.py +3 -1
- anemoi/datasets/commands/load-additions.py +9 -0
- anemoi/datasets/commands/load.py +9 -0
- anemoi/datasets/commands/patch.py +9 -0
- anemoi/datasets/commands/publish.py +9 -0
- anemoi/datasets/commands/scan.py +9 -0
- anemoi/datasets/compute/__init__.py +8 -0
- anemoi/datasets/compute/recentre.py +3 -2
- anemoi/datasets/create/__init__.py +62 -12
- anemoi/datasets/create/check.py +4 -3
- anemoi/datasets/create/chunks.py +3 -2
- anemoi/datasets/create/config.py +5 -5
- anemoi/datasets/create/functions/__init__.py +22 -7
- anemoi/datasets/create/functions/filters/__init__.py +2 -1
- anemoi/datasets/create/functions/filters/empty.py +3 -2
- anemoi/datasets/create/functions/filters/noop.py +2 -2
- anemoi/datasets/create/functions/filters/pressure_level_relative_humidity_to_specific_humidity.py +3 -2
- anemoi/datasets/create/functions/filters/pressure_level_specific_humidity_to_relative_humidity.py +3 -2
- anemoi/datasets/create/functions/filters/rename.py +16 -11
- anemoi/datasets/create/functions/filters/rotate_winds.py +3 -2
- anemoi/datasets/create/functions/filters/single_level_dewpoint_to_relative_humidity.py +3 -2
- anemoi/datasets/create/functions/filters/single_level_relative_humidity_to_dewpoint.py +3 -2
- anemoi/datasets/create/functions/filters/single_level_relative_humidity_to_specific_humidity.py +2 -2
- anemoi/datasets/create/functions/filters/single_level_specific_humidity_to_relative_humidity.py +2 -2
- anemoi/datasets/create/functions/filters/speeddir_to_uv.py +3 -2
- anemoi/datasets/create/functions/filters/unrotate_winds.py +3 -2
- anemoi/datasets/create/functions/filters/uv_to_speeddir.py +3 -2
- anemoi/datasets/create/functions/sources/__init__.py +2 -2
- anemoi/datasets/create/functions/sources/accumulations.py +10 -4
- anemoi/datasets/create/functions/sources/constants.py +3 -2
- anemoi/datasets/create/functions/sources/empty.py +3 -2
- anemoi/datasets/create/functions/sources/forcings.py +3 -2
- anemoi/datasets/create/functions/sources/grib.py +8 -2
- anemoi/datasets/create/functions/sources/hindcasts.py +3 -2
- anemoi/datasets/create/functions/sources/mars.py +97 -17
- anemoi/datasets/create/functions/sources/netcdf.py +3 -2
- anemoi/datasets/create/functions/sources/opendap.py +2 -2
- anemoi/datasets/create/functions/sources/recentre.py +3 -2
- anemoi/datasets/create/functions/sources/source.py +3 -2
- anemoi/datasets/create/functions/sources/tendencies.py +3 -2
- anemoi/datasets/create/functions/sources/xarray/__init__.py +8 -3
- anemoi/datasets/create/functions/sources/xarray/coordinates.py +3 -2
- anemoi/datasets/create/functions/sources/xarray/field.py +6 -5
- anemoi/datasets/create/functions/sources/xarray/fieldlist.py +12 -4
- anemoi/datasets/create/functions/sources/xarray/flavour.py +2 -2
- anemoi/datasets/create/functions/sources/xarray/grid.py +2 -2
- anemoi/datasets/create/functions/sources/xarray/metadata.py +3 -2
- anemoi/datasets/create/functions/sources/xarray/time.py +2 -2
- anemoi/datasets/create/functions/sources/xarray/variable.py +6 -9
- anemoi/datasets/create/functions/sources/xarray_kerchunk.py +2 -2
- anemoi/datasets/create/functions/sources/xarray_zarr.py +2 -2
- anemoi/datasets/create/functions/sources/zenodo.py +2 -2
- anemoi/datasets/create/input/__init__.py +3 -17
- anemoi/datasets/create/input/action.py +3 -8
- anemoi/datasets/create/input/concat.py +3 -2
- anemoi/datasets/create/input/context.py +3 -8
- anemoi/datasets/create/input/data_sources.py +3 -9
- anemoi/datasets/create/input/empty.py +3 -9
- anemoi/datasets/create/input/filter.py +3 -9
- anemoi/datasets/create/input/function.py +3 -9
- anemoi/datasets/create/input/join.py +3 -2
- anemoi/datasets/create/input/misc.py +3 -8
- anemoi/datasets/create/input/pipe.py +9 -3
- anemoi/datasets/create/input/repeated_dates.py +14 -8
- anemoi/datasets/create/input/result.py +154 -12
- anemoi/datasets/create/input/step.py +4 -9
- anemoi/datasets/create/input/template.py +3 -2
- anemoi/datasets/create/input/trace.py +3 -2
- anemoi/datasets/create/patch.py +9 -1
- anemoi/datasets/create/persistent.py +3 -2
- anemoi/datasets/create/size.py +3 -2
- anemoi/datasets/create/statistics/__init__.py +3 -2
- anemoi/datasets/create/statistics/summary.py +3 -2
- anemoi/datasets/create/utils.py +15 -2
- anemoi/datasets/create/writer.py +3 -2
- anemoi/datasets/create/zarr.py +3 -2
- anemoi/datasets/data/__init__.py +27 -1
- anemoi/datasets/data/concat.py +5 -1
- anemoi/datasets/data/dataset.py +216 -37
- anemoi/datasets/data/debug.py +4 -1
- anemoi/datasets/data/ensemble.py +4 -1
- anemoi/datasets/data/fill_missing.py +165 -0
- anemoi/datasets/data/forwards.py +23 -1
- anemoi/datasets/data/grids.py +236 -58
- anemoi/datasets/data/indexing.py +4 -1
- anemoi/datasets/data/interpolate.py +4 -1
- anemoi/datasets/data/join.py +12 -9
- anemoi/datasets/data/masked.py +36 -10
- anemoi/datasets/data/merge.py +180 -0
- anemoi/datasets/data/misc.py +18 -3
- anemoi/datasets/data/missing.py +4 -1
- anemoi/datasets/data/rescale.py +4 -1
- anemoi/datasets/data/select.py +4 -1
- anemoi/datasets/data/statistics.py +4 -1
- anemoi/datasets/data/stores.py +66 -3
- anemoi/datasets/data/subset.py +6 -1
- anemoi/datasets/data/unchecked.py +4 -1
- anemoi/datasets/data/xy.py +20 -5
- anemoi/datasets/dates/__init__.py +9 -7
- anemoi/datasets/dates/groups.py +4 -2
- anemoi/datasets/grids.py +86 -2
- anemoi/datasets/testing.py +3 -2
- anemoi/datasets/utils/__init__.py +8 -0
- anemoi/datasets/utils/fields.py +2 -2
- {anemoi_datasets-0.5.7.dist-info → anemoi_datasets-0.5.11.dist-info}/METADATA +11 -29
- anemoi_datasets-0.5.11.dist-info/RECORD +123 -0
- {anemoi_datasets-0.5.7.dist-info → anemoi_datasets-0.5.11.dist-info}/WHEEL +1 -1
- anemoi/datasets/fields.py +0 -66
- anemoi_datasets-0.5.7.dist-info/RECORD +0 -122
- {anemoi_datasets-0.5.7.dist-info → anemoi_datasets-0.5.11.dist-info}/LICENSE +0 -0
- {anemoi_datasets-0.5.7.dist-info → anemoi_datasets-0.5.11.dist-info}/entry_points.txt +0 -0
- {anemoi_datasets-0.5.7.dist-info → anemoi_datasets-0.5.11.dist-info}/top_level.txt +0 -0
anemoi/datasets/grids.py
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# (C) Copyright 2024
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# (C) Copyright 2024 Anemoi contributors.
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#
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# This software is licensed under the terms of the Apache Licence Version 2.0
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# which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
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# In applying this licence, ECMWF does not waive the privileges and immunities
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# granted to it by virtue of its status as an intergovernmental organisation
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# nor does it submit to any jurisdiction.
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import base64
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import logging
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import numpy as np
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return np.array([i for i in indices])
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def outline(lats, lons, neighbours=5):
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from scipy.spatial import KDTree
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xyx = latlon_to_xyz(lats, lons)
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grid_points = np.array(xyx).transpose()
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# Use a KDTree to find the nearest points
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_, indices = KDTree(grid_points).query(grid_points, k=neighbours)
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# Centre of the Earth
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zero = np.array([0.0, 0.0, 0.0])
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outside = []
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for i, (point, index) in enumerate(zip(grid_points, indices)):
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inside = False
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for j in range(1, neighbours):
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t = Triangle3D(
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grid_points[index[j]],
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grid_points[index[(j + 1) % neighbours]],
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grid_points[index[(j + 2) % neighbours]],
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)
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inside = t.intersect(zero, point)
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if inside:
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break
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outside.append(i)
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return outside
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def deserialise_mask(encoded):
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import zlib
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packed = pickle.loads(zlib.decompress(base64.b64decode(encoded)))
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mask = []
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value = False
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value = not value
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return np.array(mask, dtype=bool)
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def _serialise_mask(mask):
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packed = []
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return base64.b64encode(zlib.compress(pickle.dumps(packed))).decode("utf-8")
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return result
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if __name__ == "__main__":
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global_lats, global_lons = np.meshgrid(
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np.linspace(90, -90, 90),
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anemoi/datasets/testing.py
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# (C) Copyright 2024
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# (C) Copyright 2024 Anemoi contributors.
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# which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
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# A collection of functions to support pytest testing
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# nor does it submit to any jurisdiction.
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anemoi/datasets/utils/fields.py
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Name: anemoi-datasets
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Version: 0.5.
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Version: 0.5.11
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Summary: A package to hold various functions to support training of ML models on ECMWF data.
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Author-email: "European Centre for Medium-Range Weather Forecasts (ECMWF)" <software.support@ecmwf.int>
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License: Apache License
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# (C) Copyright 2024 European Centre for Medium-Range Weather Forecasts.
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