anemoi-datasets 0.5.7__py3-none-any.whl → 0.5.10__py3-none-any.whl

anemoi/datasets/grids.py

@@ -1,12 +1,14 @@
-# (C) Copyright 2024 ECMWF.
+# (C) Copyright 2024 Anemoi contributors.
 #
 # This software is licensed under the terms of the Apache Licence Version 2.0
 # which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
+#
 # In applying this licence, ECMWF does not waive the privileges and immunities
 # granted to it by virtue of its status as an intergovernmental organisation
 # nor does it submit to any jurisdiction.
-#
 
+
+import base64
 import logging
 
 import numpy as np
@@ -295,6 +297,88 @@ def thinning_mask(
     return np.array([i for i in indices])
 
 
+def outline(lats, lons, neighbours=5):
+    from scipy.spatial import KDTree
+
+    xyx = latlon_to_xyz(lats, lons)
+    grid_points = np.array(xyx).transpose()
+
+    # Use a KDTree to find the nearest points
+    _, indices = KDTree(grid_points).query(grid_points, k=neighbours)
+
+    # Centre of the Earth
+    zero = np.array([0.0, 0.0, 0.0])
+
+    outside = []
+
+    for i, (point, index) in enumerate(zip(grid_points, indices)):
+        inside = False
+        for j in range(1, neighbours):
+            t = Triangle3D(
+                grid_points[index[j]],
+                grid_points[index[(j + 1) % neighbours]],
+                grid_points[index[(j + 2) % neighbours]],
+            )
+            inside = t.intersect(zero, point)
+            if inside:
+                break
+
+        if not inside:
+            outside.append(i)
+
+    return outside
+
+
+def deserialise_mask(encoded):
+    import pickle
+    import zlib
+
+    packed = pickle.loads(zlib.decompress(base64.b64decode(encoded)))
+
+    mask = []
+    value = False
+    for count in packed:
+        mask.extend([value] * count)
+        value = not value
+    return np.array(mask, dtype=bool)
+
+
+def _serialise_mask(mask):
+    import pickle
+    import zlib
+
+    assert len(mask.shape) == 1
+    assert len(mask)
+
+    packed = []
+    last = mask[0]
+    count = 1
+
+    for value in mask[1:]:
+        if value == last:
+            count += 1
+        else:
+            packed.append(count)
+            last = value
+            count = 1
+
+    packed.append(count)
+
+    # We always start with an 'off' value
+    # So if the first value is 'on', we need to add a zero
+    if mask[0]:
+        packed.insert(0, 0)
+
+    return base64.b64encode(zlib.compress(pickle.dumps(packed))).decode("utf-8")
+
+
+def serialise_mask(mask):
+    result = _serialise_mask(mask)
+    # Make sure we can deserialise it
+    assert np.all(mask == deserialise_mask(result))
+    return result
+
+
 if __name__ == "__main__":
     global_lats, global_lons = np.meshgrid(
         np.linspace(90, -90, 90),

anemoi/datasets/testing.py

@@ -1,11 +1,12 @@
-# (C) Copyright 2024 ECMWF.
+# (C) Copyright 2024 Anemoi contributors.
 #
 # This software is licensed under the terms of the Apache Licence Version 2.0
 # which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
+#
 # In applying this licence, ECMWF does not waive the privileges and immunities
 # granted to it by virtue of its status as an intergovernmental organisation
 # nor does it submit to any jurisdiction.
-#
+
 
 # A collection of functions to support pytest testing
 

anemoi/datasets/utils/__init__.py

@@ -0,0 +1,8 @@
+# (C) Copyright 2024 Anemoi contributors.
+#
+# This software is licensed under the terms of the Apache Licence Version 2.0
+# which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
+#
+# In applying this licence, ECMWF does not waive the privileges and immunities
+# granted to it by virtue of its status as an intergovernmental organisation
+# nor does it submit to any jurisdiction.

anemoi/datasets/utils/fields.py

@@ -1,11 +1,11 @@
-# (C) Copyright 2024 ECMWF.
+# (C) Copyright 2024 Anemoi contributors.
 #
 # This software is licensed under the terms of the Apache Licence Version 2.0
 # which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.
+#
 # In applying this licence, ECMWF does not waive the privileges and immunities
 # granted to it by virtue of its status as an intergovernmental organisation
 # nor does it submit to any jurisdiction.
-#
 
 
 class WrappedField:

{anemoi_datasets-0.5.7.dist-info → anemoi_datasets-0.5.10.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: anemoi-datasets
-Version: 0.5.7
+Version: 0.5.10
 Summary: A package to hold various functions to support training of ML models on ECMWF data.
 Author-email: "European Centre for Medium-Range Weather Forecasts (ECMWF)" <software.support@ecmwf.int>
 License: Apache License
@@ -219,11 +219,13 @@ Classifier: Programming Language :: Python :: 3.9
 Classifier: Programming Language :: Python :: 3.10
 Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
 Classifier: Programming Language :: Python :: Implementation :: CPython
 Classifier: Programming Language :: Python :: Implementation :: PyPy
 Requires-Python: >=3.9
 License-File: LICENSE
-Requires-Dist: anemoi-utils[provenance] >=0.3.15
+Requires-Dist: anemoi-transform >=0.0.5
+Requires-Dist: anemoi-utils[provenance] >=0.4.2
 Requires-Dist: cfunits
 Requires-Dist: numpy
 Requires-Dist: pyyaml
@@ -231,39 +233,16 @@ Requires-Dist: semantic-version
 Requires-Dist: tqdm
 Requires-Dist: zarr <=2.17
 Provides-Extra: all
-Requires-Dist: boto3 ; extra == 'all'
-Requires-Dist: earthkit-data[mars] >=0.9 ; extra == 'all'
-Requires-Dist: earthkit-geo >=0.2 ; extra == 'all'
-Requires-Dist: earthkit-meteo ; extra == 'all'
-Requires-Dist: ecmwflibs >=0.6.3 ; extra == 'all'
-Requires-Dist: entrypoints ; extra == 'all'
-Requires-Dist: gcsfs ; extra == 'all'
-Requires-Dist: kerchunk ; extra == 'all'
-Requires-Dist: pyproj ; extra == 'all'
-Requires-Dist: requests ; extra == 'all'
+Requires-Dist: anemoi-datasets[create,remote,xarray] ; extra == 'all'
 Provides-Extra: create
-Requires-Dist: earthkit-data[mars] >=0.9 ; extra == 'create'
+Requires-Dist: earthkit-data[mars] >=0.10.7 ; extra == 'create'
 Requires-Dist: earthkit-geo >=0.2 ; extra == 'create'
 Requires-Dist: earthkit-meteo ; extra == 'create'
-Requires-Dist: ecmwflibs >=0.6.3 ; extra == 'create'
+Requires-Dist: eccodes >=2.38.1 ; extra == 'create'
 Requires-Dist: entrypoints ; extra == 'create'
 Requires-Dist: pyproj ; extra == 'create'
 Provides-Extra: dev
-Requires-Dist: boto3 ; extra == 'dev'
-Requires-Dist: earthkit-data[mars] >=0.9 ; extra == 'dev'
-Requires-Dist: earthkit-geo >=0.2 ; extra == 'dev'
-Requires-Dist: earthkit-meteo ; extra == 'dev'
-Requires-Dist: ecmwflibs >=0.6.3 ; extra == 'dev'
-Requires-Dist: entrypoints ; extra == 'dev'
-Requires-Dist: gcsfs ; extra == 'dev'
-Requires-Dist: kerchunk ; extra == 'dev'
-Requires-Dist: nbsphinx ; extra == 'dev'
-Requires-Dist: pandoc ; extra == 'dev'
-Requires-Dist: pyproj ; extra == 'dev'
-Requires-Dist: pytest ; extra == 'dev'
-Requires-Dist: requests ; extra == 'dev'
-Requires-Dist: sphinx ; extra == 'dev'
-Requires-Dist: sphinx-rtd-theme ; extra == 'dev'
+Requires-Dist: anemoi-datasets[all,docs,tests] ; extra == 'dev'
 Provides-Extra: docs
 Requires-Dist: nbsphinx ; extra == 'docs'
 Requires-Dist: pandoc ; extra == 'docs'
@@ -278,4 +257,7 @@ Requires-Dist: pytest ; extra == 'tests'
 Provides-Extra: xarray
 Requires-Dist: gcsfs ; extra == 'xarray'
 Requires-Dist: kerchunk ; extra == 'xarray'
+Requires-Dist: pandas ; extra == 'xarray'
+Requires-Dist: planetary-computer ; extra == 'xarray'
+Requires-Dist: pystac-client ; extra == 'xarray'
 

anemoi_datasets-0.5.10.dist-info/RECORD

@@ -0,0 +1,124 @@
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+anemoi/datasets/__main__.py,sha256=5NW2A3OgTimB4ptwYThivIRSeCrvabMuvnr8mmnVx0E,715
+anemoi/datasets/_version.py,sha256=BixMRkBB7zaOaaqyQD1DB0Uu3zeudj_rm9MVXojbgng,413
+anemoi/datasets/fields.py,sha256=OCOu4i3UFjI_EqOm3gW5_8yEnM3EhNMb3MzbCki0piI,1941
+anemoi/datasets/grids.py,sha256=bq7pB_6uswILT3t8C8SeUpUrBww31dw5au_USrped6c,10919
+anemoi/datasets/testing.py,sha256=7HGOz5_V9MbkHTDJ4KbklGRndBMrFfVrBBu6a9k0_qY,1825
+anemoi/datasets/commands/__init__.py,sha256=O5W3yHZywRoAqmRUioAr3zMCh0hGVV18wZYGvc00ioM,698
+anemoi/datasets/commands/cleanup.py,sha256=2rD34bHtfOCLwQh7yXa02IJmmOYMOma4YDj0PM-2-Jc,1456
+anemoi/datasets/commands/compare.py,sha256=8YOlFi9Ydw81qNx4kmI35gvoldUAjYae1enBhxqLrvQ,3256
+anemoi/datasets/commands/copy.py,sha256=2owwwcih6mzrmgxrKNmm1B9ngjxZ6q3ZVo3S7grrGWQ,11305
+anemoi/datasets/commands/create.py,sha256=SRHQdMPwBmbjfi2JDYmF3uC7R6dIrcrOOBs0aaVSQmQ,5505
+anemoi/datasets/commands/finalise-additions.py,sha256=ZCUa5CbScR_tEImcJe9AhhGryyrsq1bYhM-dtjaIw7M,1552
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