aiagents4pharma 1.39.2__py3-none-any.whl → 1.39.3__py3-none-any.whl

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@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: aiagents4pharma
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- Version: 1.39.2
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+ Version: 1.39.3
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  Summary: AI Agents for drug discovery, drug development, and other pharmaceutical R&D.
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  Classifier: Programming Language :: Python :: 3
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  Classifier: License :: OSI Approved :: MIT License
@@ -114,18 +114,19 @@ _We now have all the agents available on Docker Hub._
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  Both agents require [Ollama](https://ollama.com/) to run embedding models like `nomic-embed-text`. We use a **single startup script** that automatically detects your hardware (NVIDIA, AMD, or CPU) and handles container startup, model loading, and service orchestration.
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- ##### **1. Clone the repository and navigate to the agent directory**
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+ ##### **1. Download docker-compose.yml, .env.example and startup.sh from GitHub**
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- ```sh
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- git clone https://github.com/VirtualPatientEngine/AIAgents4Pharma
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+ ###### Talk2Agents4Pharma
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- cd AIAgents4Pharma/aiagents4pharma/<agent>
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+ ```sh
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+ mkdir talk2aiagents4pharma && cd talk2aiagents4pharma && wget https://raw.githubusercontent.com/VirtualPatientEngine/AIAgents4Pharma/main/aiagents4pharma/talk2aiagents4pharma/docker-compose.yml https://raw.githubusercontent.com/VirtualPatientEngine/AIAgents4Pharma/main/aiagents4pharma/talk2aiagents4pharma/.env.example https://raw.githubusercontent.com/VirtualPatientEngine/AIAgents4Pharma/main/aiagents4pharma/talk2aiagents4pharma/startup.sh
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  ```
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- Replace `<agent>` with either:
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+ ###### Talk2KnowledgeGraphs
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- - `talk2aiagents4pharma`
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- - `talk2knowledgegraphs`
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+ ```sh
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+ mkdir talk2knowledgegraphs && cd talk2knowledgegraphs && wget https://raw.githubusercontent.com/VirtualPatientEngine/AIAgents4Pharma/main/aiagents4pharma/talk2knowledgegraphs/docker-compose.yml https://raw.githubusercontent.com/VirtualPatientEngine/AIAgents4Pharma/main/aiagents4pharma/talk2knowledgegraphs/.env.example https://raw.githubusercontent.com/VirtualPatientEngine/AIAgents4Pharma/main/aiagents4pharma/talk2knowledgegraphs/startup.sh
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+ ```
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  ##### **2. Setup environment variables**
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@@ -209,8 +210,7 @@ If you are using docker on Windows, please follow these [Windows Setup Notes](ht
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  1. **Clone the repository:**
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  ```sh
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- git clone https://github.com/VirtualPatientEngine/AIAgents4Pharma
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- cd AIAgents4Pharma
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+ git clone https://github.com/VirtualPatientEngine/AIAgents4Pharma && cd AIAgents4Pharma
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  ```
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  2. **Install dependencies:**
@@ -321,9 +321,10 @@ git push origin feat/your-feature-name
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  #### Contacts for contributions
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- - **Talk2Biomodels / Talk2Cells**: [@gurdeep330](https://github.com/gurdeep330), [@lilijap](https://github.com/lilijap), [@dmccloskey](https://github.com/dmccloskey)
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- - **Talk2KnowledgeGraphs**: [@awmulyadi](https://github.com/awmulyadi), [@dmccloskey](https://github.com/dmccloskey)
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- - **Talk2Scholars**: [@ansh-info](https://github.com/ansh-info), [@gurdeep330](https://github.com/gurdeep330), [@dmccloskey](https://github.com/dmccloskey)
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+ - **Talk2Biomodels**: [@lilijap](https://github.com/lilijap), [@gurdeep330](https://github.com/gurdeep330)
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+ - **Talk2Cells**: [@gurdeep330](https://github.com/gurdeep330)
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+ - **Talk2KnowledgeGraphs**: [@awmulyadi](https://github.com/awmulyadi)
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+ - **Talk2Scholars**: [@ansh-info](https://github.com/ansh-info), [@gurdeep330](https://github.com/gurdeep330)
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  Please refer to our [CONTRIBUTING.md](CONTRIBUTING.md) for more detailed contribution guidelines.
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@@ -251,8 +251,8 @@ aiagents4pharma/talk2scholars/tools/zotero/utils/review_helper.py,sha256=IPD1V9y
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  aiagents4pharma/talk2scholars/tools/zotero/utils/write_helper.py,sha256=ALwLecy1QVebbsmXJiDj1GhGmyhq2R2tZlAyEl1vfhw,7410
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  aiagents4pharma/talk2scholars/tools/zotero/utils/zotero_path.py,sha256=oIrfbOySgts50ksHKyjcWjRkPRIS88g3Lc0v9mBkU8w,6375
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  aiagents4pharma/talk2scholars/tools/zotero/utils/zotero_pdf_downloader.py,sha256=ERBha8afU6Q1EaRBe9qB8tchOzZ4_KfFgDW6EElOJoU,4816
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- aiagents4pharma-1.39.2.dist-info/licenses/LICENSE,sha256=IcIbyB1Hyk5ZDah03VNQvJkbNk2hkBCDqQ8qtnCvB4Q,1077
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- aiagents4pharma-1.39.2.dist-info/METADATA,sha256=Gc44kyTHU3VlsH8ZqKwPJvZId36XWFRHAlLTpLShCNg,14775
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- aiagents4pharma-1.39.2.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- aiagents4pharma-1.39.2.dist-info/top_level.txt,sha256=-AH8rMmrSnJtq7HaAObS78UU-cTCwvX660dSxeM7a0A,16
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- aiagents4pharma-1.39.2.dist-info/RECORD,,
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+ aiagents4pharma-1.39.3.dist-info/licenses/LICENSE,sha256=IcIbyB1Hyk5ZDah03VNQvJkbNk2hkBCDqQ8qtnCvB4Q,1077
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+ aiagents4pharma-1.39.3.dist-info/METADATA,sha256=1nFBKl2FZ5seKMkuixLjF8hQqnR5DFYGrNCO9jUTFug,15462
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+ aiagents4pharma-1.39.3.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ aiagents4pharma-1.39.3.dist-info/top_level.txt,sha256=-AH8rMmrSnJtq7HaAObS78UU-cTCwvX660dSxeM7a0A,16
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+ aiagents4pharma-1.39.3.dist-info/RECORD,,