PyPI - accusleepy - Versions diffs - 0.7.3__py3-none-any.whl → 0.8.0__py3-none-any.whl - Mend

accusleepy 0.7.3py3-none-any.whl → 0.8.0py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (12) hide show

accusleepy/config.json +3 -1
accusleepy/constants.py +5 -0
accusleepy/fileio.py +20 -2
accusleepy/gui/images/primary_window.png +0 -0
accusleepy/gui/main.py +11 -0
accusleepy/gui/manual_scoring.py +16 -5
accusleepy/gui/primary_window.py +146 -14
accusleepy/gui/primary_window.ui +298 -177
accusleepy/gui/text/dev_guide.md +1 -1
{accusleepy-0.7.3.dist-info → accusleepy-0.8.0.dist-info}/METADATA +3 -2
{accusleepy-0.7.3.dist-info → accusleepy-0.8.0.dist-info}/RECORD +12 -12
{accusleepy-0.7.3.dist-info → accusleepy-0.8.0.dist-info}/WHEEL +1 -1

accusleepy/config.json CHANGED Viewed

@@ -33,5 +33,7 @@
         "learning_rate": 0.001,
         "momentum": 0.9,
         "training_epochs": 6
-    }
+    },
+    "epochs_to_show": 5,
+    "autoscroll_state": false
 }

accusleepy/constants.py CHANGED Viewed

@@ -67,6 +67,8 @@ DEFAULT_OVERWRITE_KEY = "default_overwrite_setting"
 EMG_FILTER_KEY = "emg_filter"
 # model training hyperparameters key
 HYPERPARAMETERS_KEY = "hyperparameters"
+EPOCHS_TO_SHOW_KEY = "epochs_to_show"
+AUTOSCROLL_KEY = "autoscroll_state"
 # default values
 # default UI settings
@@ -82,3 +84,6 @@ DEFAULT_BATCH_SIZE = 64
 DEFAULT_LEARNING_RATE = 1e-3
 DEFAULT_MOMENTUM = 0.9
 DEFAULT_TRAINING_EPOCHS = 6
+# default manual scoring settings
+DEFAULT_EPOCHS_TO_SHOW = 5
+DEFAULT_AUTOSCROLL_STATE = False

accusleepy/fileio.py CHANGED Viewed

@@ -112,7 +112,15 @@ def save_labels(
 def load_config() -> tuple[
-    BrainStateSet, int | float, bool, bool, int | float, EMGFilter, Hyperparameters
+    BrainStateSet,
+    int | float,
+    bool,
+    bool,
+    int | float,
+    EMGFilter,
+    Hyperparameters,
+    int,
+    bool,
 ]:
     """Load configuration file with brain state options
@@ -122,7 +130,9 @@ def load_config() -> tuple[
         default confidence score output setting,
         default minimum bout length,
         EMG filter parameters,
-        model training hyperparameters
+        model training hyperparameters,
+        default epochs to show for manual scoring,
+        default autoscroll state for manual scoring
     """
     with open(
         os.path.join(os.path.dirname(os.path.abspath(__file__)), c.CONFIG_FILE), "r"
@@ -158,6 +168,8 @@ def load_config() -> tuple[
                 },
             )
         ),
+        data.get(c.EPOCHS_TO_SHOW_KEY, c.DEFAULT_EPOCHS_TO_SHOW),
+        data.get(c.AUTOSCROLL_KEY, c.DEFAULT_AUTOSCROLL_STATE),
     )
@@ -169,6 +181,8 @@ def save_config(
     min_bout_length: int | float,
     emg_filter: EMGFilter,
     hyperparameters: Hyperparameters,
+    epochs_to_show: int,
+    autoscroll_state: bool,
 ) -> None:
     """Save configuration of brain state options to json file
@@ -181,6 +195,8 @@ def save_config(
     :param overwrite_setting: default setting for overwriting
         existing labels
     :param hyperparameters: model training hyperparameters
+    :param epochs_to_show: default epochs to show for manual scoring,
+    :param autoscroll_state: default autoscroll state for manual scoring
     """
     output_dict = brain_state_set.to_output_dict()
     output_dict.update({c.DEFAULT_EPOCH_LENGTH_KEY: default_epoch_length})
@@ -189,6 +205,8 @@ def save_config(
     output_dict.update({c.DEFAULT_MIN_BOUT_LENGTH_KEY: min_bout_length})
     output_dict.update({c.EMG_FILTER_KEY: emg_filter.__dict__})
     output_dict.update({c.HYPERPARAMETERS_KEY: hyperparameters.__dict__})
+    output_dict.update({c.EPOCHS_TO_SHOW_KEY: epochs_to_show})
+    output_dict.update({c.AUTOSCROLL_KEY: autoscroll_state})
     with open(
         os.path.join(os.path.dirname(os.path.abspath(__file__)), c.CONFIG_FILE), "w"
     ) as f:

accusleepy/gui/images/primary_window.png CHANGED Viewed

Binary file

accusleepy/gui/main.py CHANGED Viewed

@@ -81,6 +81,11 @@ from accusleepy.validation import (
 # note: functions using torch or scipy are lazily imported
+# on Windows, prevent dark mode from changing the visual style
+if os.name == "nt":
+    sys.argv += ["-platform", "windows:darkmode=0"]
 # relative path to user manual
 MAIN_GUIDE_FILE = os.path.normpath(r"text/main_guide.md")
@@ -116,6 +121,8 @@ class AccuSleepWindow(QMainWindow):
             self.min_bout_length,
             self.emg_filter,
             self.hyperparameters,
+            self.default_epochs_to_show,
+            self.default_autoscroll_state,
         ) = load_config()
         self.settings_widgets = None
@@ -1238,6 +1245,8 @@ class AccuSleepWindow(QMainWindow):
         self.ui.overwrite_default_checkbox.setChecked(self.only_overwrite_undefined)
         self.ui.confidence_setting_checkbox.setChecked(self.save_confidence_scores)
         self.ui.default_min_bout_length_spinbox.setValue(self.min_bout_length)
+        self.ui.epochs_to_show_spinbox.setValue(self.default_epochs_to_show)
+        self.ui.autoscroll_checkbox.setChecked(self.default_autoscroll_state)
         # EMG filter
         self.ui.emg_order_spinbox.setValue(self.emg_filter.order)
         self.ui.bp_lower_spinbox.setValue(self.emg_filter.bp_lower)
@@ -1439,6 +1448,8 @@ class AccuSleepWindow(QMainWindow):
                 momentum=self.hyperparameters.momentum,
                 training_epochs=self.hyperparameters.training_epochs,
             ),
+            epochs_to_show=self.ui.epochs_to_show_spinbox.value(),
+            autoscroll_state=self.ui.autoscroll_checkbox.isChecked(),
         )
         self.ui.save_config_status.setText("configuration saved")

accusleepy/gui/manual_scoring.py CHANGED Viewed

@@ -140,10 +140,17 @@ class ManualScoringWindow(QDialog):
         self.setWindowTitle("AccuSleePy manual scoring window")
         # load set of valid brain states
-        self.brain_state_set, _, _, _, _, _, _ = load_config()
-        # initial setting for number of epochs to show in the lower plot
-        self.epochs_to_show = 5
+        (
+            self.brain_state_set,
+            _,
+            _,
+            _,
+            _,
+            _,
+            _,
+            self.epochs_to_show,
+            self.autoscroll_state,
+        ) = load_config()
         # find the set of y-axis locations of valid brain state labels
         self.label_display_options = convert_labels(
@@ -216,7 +223,11 @@ class ManualScoringWindow(QDialog):
         self.emg_signal_offset = 0
         self.roi_brain_state = 0
         self.label_roi_mode = False
-        self.autoscroll_state = False
+        # set autoscroll state and epochs to show, based on defaults
+        self.ui.autoscroll.setChecked(self.autoscroll_state)
+        self.ui.shownepochslabel.setText(str(self.epochs_to_show))
         # keep track of save state to warn user when they quit
         self.last_saved_labels = copy.deepcopy(self.labels)

accusleepy/gui/primary_window.py CHANGED Viewed

@@ -2224,20 +2224,25 @@ class Ui_PrimaryWindow(object):
         self.horizontalLayout_81.setSpacing(20)
         self.horizontalLayout_81.setObjectName("horizontalLayout_81")
         self.verticalLayout_6 = QVBoxLayout()
-        self.verticalLayout_6.setSpacing(10)
+        self.verticalLayout_6.setSpacing(20)
         self.verticalLayout_6.setObjectName("verticalLayout_6")
+        self.primary_defaults_groupbox = QGroupBox(self.ui_default_page)
+        self.primary_defaults_groupbox.setObjectName("primary_defaults_groupbox")
+        self.verticalLayout_4 = QVBoxLayout(self.primary_defaults_groupbox)
+        self.verticalLayout_4.setSpacing(10)
+        self.verticalLayout_4.setObjectName("verticalLayout_4")
         self.default_epoch_layout = QHBoxLayout()
         self.default_epoch_layout.setObjectName("default_epoch_layout")
         self.horizontalLayout_60 = QHBoxLayout()
         self.horizontalLayout_60.setObjectName("horizontalLayout_60")
-        self.label_17 = QLabel(self.ui_default_page)
+        self.label_17 = QLabel(self.primary_defaults_groupbox)
         self.label_17.setObjectName("label_17")
         sizePolicy1.setHeightForWidth(self.label_17.sizePolicy().hasHeightForWidth())
         self.label_17.setSizePolicy(sizePolicy1)
         self.horizontalLayout_60.addWidget(self.label_17)
-        self.default_epoch_input = QDoubleSpinBox(self.ui_default_page)
+        self.default_epoch_input = QDoubleSpinBox(self.primary_defaults_groupbox)
         self.default_epoch_input.setObjectName("default_epoch_input")
         sizePolicy1.setHeightForWidth(
             self.default_epoch_input.sizePolicy().hasHeightForWidth()
@@ -2256,13 +2261,13 @@ class Ui_PrimaryWindow(object):
         self.default_epoch_layout.addItem(self.horizontalSpacer_70)
-        self.verticalLayout_6.addLayout(self.default_epoch_layout)
+        self.verticalLayout_4.addLayout(self.default_epoch_layout)
         self.horizontalLayout_75 = QHBoxLayout()
         self.horizontalLayout_75.setObjectName("horizontalLayout_75")
         self.horizontalLayout_76 = QHBoxLayout()
         self.horizontalLayout_76.setObjectName("horizontalLayout_76")
-        self.overwrite_default_checkbox = QCheckBox(self.ui_default_page)
+        self.overwrite_default_checkbox = QCheckBox(self.primary_defaults_groupbox)
         self.overwrite_default_checkbox.setObjectName("overwrite_default_checkbox")
         self.horizontalLayout_76.addWidget(self.overwrite_default_checkbox)
@@ -2275,7 +2280,7 @@ class Ui_PrimaryWindow(object):
         self.horizontalLayout_75.addItem(self.horizontalSpacer_88)
-        self.verticalLayout_6.addLayout(self.horizontalLayout_75)
+        self.verticalLayout_4.addLayout(self.horizontalLayout_75)
         self.confidence_score_setting_layout = QHBoxLayout()
         self.confidence_score_setting_layout.setObjectName(
@@ -2283,7 +2288,7 @@ class Ui_PrimaryWindow(object):
         )
         self.horizontalLayout_62 = QHBoxLayout()
         self.horizontalLayout_62.setObjectName("horizontalLayout_62")
-        self.confidence_setting_checkbox = QCheckBox(self.ui_default_page)
+        self.confidence_setting_checkbox = QCheckBox(self.primary_defaults_groupbox)
         self.confidence_setting_checkbox.setObjectName("confidence_setting_checkbox")
         sizePolicy1.setHeightForWidth(
             self.confidence_setting_checkbox.sizePolicy().hasHeightForWidth()
@@ -2301,20 +2306,22 @@ class Ui_PrimaryWindow(object):
         self.confidence_score_setting_layout.addItem(self.horizontalSpacer_72)
-        self.verticalLayout_6.addLayout(self.confidence_score_setting_layout)
+        self.verticalLayout_4.addLayout(self.confidence_score_setting_layout)
         self.horizontalLayout_2 = QHBoxLayout()
         self.horizontalLayout_2.setObjectName("horizontalLayout_2")
         self.horizontalLayout_18 = QHBoxLayout()
         self.horizontalLayout_18.setObjectName("horizontalLayout_18")
-        self.label_19 = QLabel(self.ui_default_page)
+        self.label_19 = QLabel(self.primary_defaults_groupbox)
         self.label_19.setObjectName("label_19")
         sizePolicy1.setHeightForWidth(self.label_19.sizePolicy().hasHeightForWidth())
         self.label_19.setSizePolicy(sizePolicy1)
         self.horizontalLayout_18.addWidget(self.label_19)
-        self.default_min_bout_length_spinbox = QDoubleSpinBox(self.ui_default_page)
+        self.default_min_bout_length_spinbox = QDoubleSpinBox(
+            self.primary_defaults_groupbox
+        )
         self.default_min_bout_length_spinbox.setObjectName(
             "default_min_bout_length_spinbox"
         )
@@ -2335,7 +2342,68 @@ class Ui_PrimaryWindow(object):
         self.horizontalLayout_2.addItem(self.horizontalSpacer_90)
-        self.verticalLayout_6.addLayout(self.horizontalLayout_2)
+        self.verticalLayout_4.addLayout(self.horizontalLayout_2)
+        self.verticalLayout_6.addWidget(self.primary_defaults_groupbox)
+        self.manual_defaults_groupbox = QGroupBox(self.ui_default_page)
+        self.manual_defaults_groupbox.setObjectName("manual_defaults_groupbox")
+        self.verticalLayout_7 = QVBoxLayout(self.manual_defaults_groupbox)
+        self.verticalLayout_7.setSpacing(10)
+        self.verticalLayout_7.setObjectName("verticalLayout_7")
+        self.epochs_to_show_layout = QHBoxLayout()
+        self.epochs_to_show_layout.setObjectName("epochs_to_show_layout")
+        self.horizontalLayout_78 = QHBoxLayout()
+        self.horizontalLayout_78.setObjectName("horizontalLayout_78")
+        self.label_20 = QLabel(self.manual_defaults_groupbox)
+        self.label_20.setObjectName("label_20")
+        sizePolicy1.setHeightForWidth(self.label_20.sizePolicy().hasHeightForWidth())
+        self.label_20.setSizePolicy(sizePolicy1)
+        self.horizontalLayout_78.addWidget(self.label_20)
+        self.epochs_to_show_spinbox = QSpinBox(self.manual_defaults_groupbox)
+        self.epochs_to_show_spinbox.setObjectName("epochs_to_show_spinbox")
+        self.epochs_to_show_spinbox.setMinimum(3)
+        self.epochs_to_show_spinbox.setSingleStep(2)
+        self.epochs_to_show_spinbox.setValue(5)
+        self.horizontalLayout_78.addWidget(self.epochs_to_show_spinbox)
+        self.epochs_to_show_layout.addLayout(self.horizontalLayout_78)
+        self.horizontalSpacer_92 = QSpacerItem(
+            40, 20, QSizePolicy.Policy.Expanding, QSizePolicy.Policy.Minimum
+        )
+        self.epochs_to_show_layout.addItem(self.horizontalSpacer_92)
+        self.verticalLayout_7.addLayout(self.epochs_to_show_layout)
+        self.autoscroll_layout = QHBoxLayout()
+        self.autoscroll_layout.setObjectName("autoscroll_layout")
+        self.horizontalLayout_77 = QHBoxLayout()
+        self.horizontalLayout_77.setObjectName("horizontalLayout_77")
+        self.autoscroll_checkbox = QCheckBox(self.manual_defaults_groupbox)
+        self.autoscroll_checkbox.setObjectName("autoscroll_checkbox")
+        sizePolicy1.setHeightForWidth(
+            self.autoscroll_checkbox.sizePolicy().hasHeightForWidth()
+        )
+        self.autoscroll_checkbox.setSizePolicy(sizePolicy1)
+        self.horizontalLayout_77.addWidget(self.autoscroll_checkbox)
+        self.autoscroll_layout.addLayout(self.horizontalLayout_77)
+        self.horizontalSpacer_91 = QSpacerItem(
+            10, 10, QSizePolicy.Policy.Expanding, QSizePolicy.Policy.Minimum
+        )
+        self.autoscroll_layout.addItem(self.horizontalSpacer_91)
+        self.verticalLayout_7.addLayout(self.autoscroll_layout)
+        self.verticalLayout_6.addWidget(self.manual_defaults_groupbox)
         self.verticalSpacer_5 = QSpacerItem(
             5, 5, QSizePolicy.Policy.Minimum, QSizePolicy.Policy.Expanding
@@ -3098,32 +3166,96 @@ class Ui_PrimaryWindow(object):
                 None,
             )
         )
+        self.primary_defaults_groupbox.setTitle(
+            QCoreApplication.translate("PrimaryWindow", "Primary window settings", None)
+        )
         self.label_17.setText(
             QCoreApplication.translate("PrimaryWindow", "Epoch length:", None)
         )
+        # if QT_CONFIG(tooltip)
+        self.default_epoch_input.setToolTip(
+            QCoreApplication.translate(
+                "PrimaryWindow",
+                "This sets the temporal resolution for sleep scoring",
+                None,
+            )
+        )
+        # endif // QT_CONFIG(tooltip)
         self.default_epoch_input.setSuffix(
             QCoreApplication.translate("PrimaryWindow", " sec", None)
         )
+        # if QT_CONFIG(tooltip)
+        self.overwrite_default_checkbox.setToolTip(
+            QCoreApplication.translate(
+                "PrimaryWindow",
+                "During automated scoring, only overwrite epochs with the undefined brain state",
+                None,
+            )
+        )
+        # endif // QT_CONFIG(tooltip)
         self.overwrite_default_checkbox.setText(
             QCoreApplication.translate(
                 "PrimaryWindow", "Only overwrite undefined epochs", None
             )
         )
+        # if QT_CONFIG(tooltip)
+        self.confidence_setting_checkbox.setToolTip(
+            QCoreApplication.translate(
+                "PrimaryWindow",
+                "Save the model's confidence scores in label files",
+                None,
+            )
+        )
+        # endif // QT_CONFIG(tooltip)
         self.confidence_setting_checkbox.setText(
             QCoreApplication.translate("PrimaryWindow", "Save confidence scores", None)
         )
         self.label_19.setText(
             QCoreApplication.translate("PrimaryWindow", "Minimum bout length:", None)
         )
+        # if QT_CONFIG(tooltip)
+        self.default_min_bout_length_spinbox.setToolTip(
+            QCoreApplication.translate(
+                "PrimaryWindow",
+                "Minimum allowed duration for a bout of any brain state",
+                None,
+            )
+        )
+        # endif // QT_CONFIG(tooltip)
         self.default_min_bout_length_spinbox.setSuffix(
             QCoreApplication.translate("PrimaryWindow", " sec", None)
         )
+        self.manual_defaults_groupbox.setTitle(
+            QCoreApplication.translate(
+                "PrimaryWindow", "Manual scoring window settings", None
+            )
+        )
+        self.label_20.setText(
+            QCoreApplication.translate("PrimaryWindow", "Epochs to show", None)
+        )
+        # if QT_CONFIG(tooltip)
+        self.epochs_to_show_spinbox.setToolTip(
+            QCoreApplication.translate(
+                "PrimaryWindow", "Number of epochs to display in the lower plots", None
+            )
+        )
+        # endif // QT_CONFIG(tooltip)
+        # if QT_CONFIG(tooltip)
+        self.autoscroll_checkbox.setToolTip(
+            QCoreApplication.translate(
+                "PrimaryWindow",
+                "After scoring each epoch, automatically advance to the next one",
+                None,
+            )
+        )
+        # endif // QT_CONFIG(tooltip)
+        self.autoscroll_checkbox.setText(
+            QCoreApplication.translate("PrimaryWindow", "Auto scroll", None)
+        )
         self.ui_default_description_label.setText(
             QCoreApplication.translate(
                 "PrimaryWindow",
-                "These are the default values/settings that are shown in the primary UI window when it starts up.\n"
-                "\n"
-                'Changes here will not affect the **current** state of the controls in the "Sleep scoring" tab.',
+                "<html><head/><body><p>These are the default values/settings that are shown in the primary window and manual scoring window when they start up.</p><p>Changes here will not affect the **current** state of the controls in the &quot;Sleep scoring&quot; tab.</p></body></html>",
                 None,
             )
         )

accusleepy/gui/primary_window.ui CHANGED Viewed

@@ -3787,184 +3787,307 @@ Each brain state has several attributes:
                 <item>
                  <layout class="QVBoxLayout" name="verticalLayout_6">
                   <property name="spacing">
-                   <number>10</number>
+                   <number>20</number>
                   </property>
                   <item>
-                   <layout class="QHBoxLayout" name="default_epoch_layout">
-                    <item>
-                     <layout class="QHBoxLayout" name="horizontalLayout_60">
-                      <item>
-                       <widget class="QLabel" name="label_17">
-                        <property name="sizePolicy">
-                         <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
-                          <horstretch>0</horstretch>
-                          <verstretch>0</verstretch>
-                         </sizepolicy>
-                        </property>
-                        <property name="text">
-                         <string>Epoch length:</string>
-                        </property>
-                       </widget>
-                      </item>
-                      <item>
-                       <widget class="QDoubleSpinBox" name="default_epoch_input">
-                        <property name="sizePolicy">
-                         <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
-                          <horstretch>0</horstretch>
-                          <verstretch>0</verstretch>
-                         </sizepolicy>
-                        </property>
-                        <property name="suffix">
-                         <string> sec</string>
-                        </property>
-                        <property name="maximum">
-                         <double>100000.000000000000000</double>
-                        </property>
-                        <property name="singleStep">
-                         <double>0.500000000000000</double>
-                        </property>
-                       </widget>
-                      </item>
-                     </layout>
-                    </item>
-                    <item>
-                     <spacer name="horizontalSpacer_70">
-                      <property name="orientation">
-                       <enum>Qt::Orientation::Horizontal</enum>
-                      </property>
-                      <property name="sizeType">
-                       <enum>QSizePolicy::Policy::Expanding</enum>
-                      </property>
-                      <property name="sizeHint" stdset="0">
-                       <size>
-                        <width>10</width>
-                        <height>10</height>
-                       </size>
-                      </property>
-                     </spacer>
-                    </item>
-                   </layout>
-                  </item>
-                  <item>
-                   <layout class="QHBoxLayout" name="horizontalLayout_75">
-                    <item>
-                     <layout class="QHBoxLayout" name="horizontalLayout_76">
-                      <item>
-                       <widget class="QCheckBox" name="overwrite_default_checkbox">
-                        <property name="text">
-                         <string>Only overwrite undefined epochs</string>
-                        </property>
-                       </widget>
-                      </item>
-                     </layout>
-                    </item>
-                    <item>
-                     <spacer name="horizontalSpacer_88">
-                      <property name="orientation">
-                       <enum>Qt::Orientation::Horizontal</enum>
-                      </property>
-                      <property name="sizeHint" stdset="0">
-                       <size>
-                        <width>40</width>
-                        <height>20</height>
-                       </size>
-                      </property>
-                     </spacer>
-                    </item>
-                   </layout>
-                  </item>
-                  <item>
-                   <layout class="QHBoxLayout" name="confidence_score_setting_layout">
-                    <item>
-                     <layout class="QHBoxLayout" name="horizontalLayout_62">
-                      <item>
-                       <widget class="QCheckBox" name="confidence_setting_checkbox">
-                        <property name="sizePolicy">
-                         <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
-                          <horstretch>0</horstretch>
-                          <verstretch>0</verstretch>
-                         </sizepolicy>
-                        </property>
-                        <property name="text">
-                         <string>Save confidence scores</string>
-                        </property>
-                        <property name="checked">
-                         <bool>true</bool>
-                        </property>
-                       </widget>
-                      </item>
-                     </layout>
-                    </item>
-                    <item>
-                     <spacer name="horizontalSpacer_72">
-                      <property name="orientation">
-                       <enum>Qt::Orientation::Horizontal</enum>
-                      </property>
-                      <property name="sizeType">
-                       <enum>QSizePolicy::Policy::Expanding</enum>
-                      </property>
-                      <property name="sizeHint" stdset="0">
-                       <size>
-                        <width>10</width>
-                        <height>10</height>
-                       </size>
-                      </property>
-                     </spacer>
-                    </item>
-                   </layout>
+                   <widget class="QGroupBox" name="primary_defaults_groupbox">
+                    <property name="title">
+                     <string>Primary window settings</string>
+                    </property>
+                    <layout class="QVBoxLayout" name="verticalLayout_4">
+                     <property name="spacing">
+                      <number>10</number>
+                     </property>
+                     <item>
+                      <layout class="QHBoxLayout" name="default_epoch_layout">
+                       <item>
+                        <layout class="QHBoxLayout" name="horizontalLayout_60">
+                         <item>
+                          <widget class="QLabel" name="label_17">
+                           <property name="sizePolicy">
+                            <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+                             <horstretch>0</horstretch>
+                             <verstretch>0</verstretch>
+                            </sizepolicy>
+                           </property>
+                           <property name="text">
+                            <string>Epoch length:</string>
+                           </property>
+                          </widget>
+                         </item>
+                         <item>
+                          <widget class="QDoubleSpinBox" name="default_epoch_input">
+                           <property name="sizePolicy">
+                            <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+                             <horstretch>0</horstretch>
+                             <verstretch>0</verstretch>
+                            </sizepolicy>
+                           </property>
+                           <property name="toolTip">
+                            <string>This sets the temporal resolution for sleep scoring</string>
+                           </property>
+                           <property name="suffix">
+                            <string> sec</string>
+                           </property>
+                           <property name="maximum">
+                            <double>100000.000000000000000</double>
+                           </property>
+                           <property name="singleStep">
+                            <double>0.500000000000000</double>
+                           </property>
+                          </widget>
+                         </item>
+                        </layout>
+                       </item>
+                       <item>
+                        <spacer name="horizontalSpacer_70">
+                         <property name="orientation">
+                          <enum>Qt::Orientation::Horizontal</enum>
+                         </property>
+                         <property name="sizeType">
+                          <enum>QSizePolicy::Policy::Expanding</enum>
+                         </property>
+                         <property name="sizeHint" stdset="0">
+                          <size>
+                           <width>10</width>
+                           <height>10</height>
+                          </size>
+                         </property>
+                        </spacer>
+                       </item>
+                      </layout>
+                     </item>
+                     <item>
+                      <layout class="QHBoxLayout" name="horizontalLayout_75">
+                       <item>
+                        <layout class="QHBoxLayout" name="horizontalLayout_76">
+                         <item>
+                          <widget class="QCheckBox" name="overwrite_default_checkbox">
+                           <property name="toolTip">
+                            <string>During automated scoring, only overwrite epochs with the undefined brain state</string>
+                           </property>
+                           <property name="text">
+                            <string>Only overwrite undefined epochs</string>
+                           </property>
+                          </widget>
+                         </item>
+                        </layout>
+                       </item>
+                       <item>
+                        <spacer name="horizontalSpacer_88">
+                         <property name="orientation">
+                          <enum>Qt::Orientation::Horizontal</enum>
+                         </property>
+                         <property name="sizeHint" stdset="0">
+                          <size>
+                           <width>40</width>
+                           <height>20</height>
+                          </size>
+                         </property>
+                        </spacer>
+                       </item>
+                      </layout>
+                     </item>
+                     <item>
+                      <layout class="QHBoxLayout" name="confidence_score_setting_layout">
+                       <item>
+                        <layout class="QHBoxLayout" name="horizontalLayout_62">
+                         <item>
+                          <widget class="QCheckBox" name="confidence_setting_checkbox">
+                           <property name="sizePolicy">
+                            <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+                             <horstretch>0</horstretch>
+                             <verstretch>0</verstretch>
+                            </sizepolicy>
+                           </property>
+                           <property name="toolTip">
+                            <string>Save the model's confidence scores in label files</string>
+                           </property>
+                           <property name="text">
+                            <string>Save confidence scores</string>
+                           </property>
+                           <property name="checked">
+                            <bool>true</bool>
+                           </property>
+                          </widget>
+                         </item>
+                        </layout>
+                       </item>
+                       <item>
+                        <spacer name="horizontalSpacer_72">
+                         <property name="orientation">
+                          <enum>Qt::Orientation::Horizontal</enum>
+                         </property>
+                         <property name="sizeType">
+                          <enum>QSizePolicy::Policy::Expanding</enum>
+                         </property>
+                         <property name="sizeHint" stdset="0">
+                          <size>
+                           <width>10</width>
+                           <height>10</height>
+                          </size>
+                         </property>
+                        </spacer>
+                       </item>
+                      </layout>
+                     </item>
+                     <item>
+                      <layout class="QHBoxLayout" name="horizontalLayout_2">
+                       <item>
+                        <layout class="QHBoxLayout" name="horizontalLayout_18">
+                         <item>
+                          <widget class="QLabel" name="label_19">
+                           <property name="sizePolicy">
+                            <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+                             <horstretch>0</horstretch>
+                             <verstretch>0</verstretch>
+                            </sizepolicy>
+                           </property>
+                           <property name="text">
+                            <string>Minimum bout length:</string>
+                           </property>
+                          </widget>
+                         </item>
+                         <item>
+                          <widget class="QDoubleSpinBox" name="default_min_bout_length_spinbox">
+                           <property name="sizePolicy">
+                            <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+                             <horstretch>0</horstretch>
+                             <verstretch>0</verstretch>
+                            </sizepolicy>
+                           </property>
+                           <property name="toolTip">
+                            <string>Minimum allowed duration for a bout of any brain state</string>
+                           </property>
+                           <property name="suffix">
+                            <string> sec</string>
+                           </property>
+                           <property name="maximum">
+                            <double>1000.000000000000000</double>
+                           </property>
+                           <property name="value">
+                            <double>5.000000000000000</double>
+                           </property>
+                          </widget>
+                         </item>
+                        </layout>
+                       </item>
+                       <item>
+                        <spacer name="horizontalSpacer_90">
+                         <property name="orientation">
+                          <enum>Qt::Orientation::Horizontal</enum>
+                         </property>
+                         <property name="sizeHint" stdset="0">
+                          <size>
+                           <width>5</width>
+                           <height>5</height>
+                          </size>
+                         </property>
+                        </spacer>
+                       </item>
+                      </layout>
+                     </item>
+                    </layout>
+                   </widget>
                   </item>
                   <item>
-                   <layout class="QHBoxLayout" name="horizontalLayout_2">
-                    <item>
-                     <layout class="QHBoxLayout" name="horizontalLayout_18">
-                      <item>
-                       <widget class="QLabel" name="label_19">
-                        <property name="sizePolicy">
-                         <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
-                          <horstretch>0</horstretch>
-                          <verstretch>0</verstretch>
-                         </sizepolicy>
-                        </property>
-                        <property name="text">
-                         <string>Minimum bout length:</string>
-                        </property>
-                       </widget>
-                      </item>
-                      <item>
-                       <widget class="QDoubleSpinBox" name="default_min_bout_length_spinbox">
-                        <property name="sizePolicy">
-                         <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
-                          <horstretch>0</horstretch>
-                          <verstretch>0</verstretch>
-                         </sizepolicy>
-                        </property>
-                        <property name="suffix">
-                         <string> sec</string>
-                        </property>
-                        <property name="maximum">
-                         <double>1000.000000000000000</double>
-                        </property>
-                        <property name="value">
-                         <double>5.000000000000000</double>
-                        </property>
-                       </widget>
-                      </item>
-                     </layout>
-                    </item>
-                    <item>
-                     <spacer name="horizontalSpacer_90">
-                      <property name="orientation">
-                       <enum>Qt::Orientation::Horizontal</enum>
-                      </property>
-                      <property name="sizeHint" stdset="0">
-                       <size>
-                        <width>5</width>
-                        <height>5</height>
-                       </size>
-                      </property>
-                     </spacer>
-                    </item>
-                   </layout>
+                   <widget class="QGroupBox" name="manual_defaults_groupbox">
+                    <property name="title">
+                     <string>Manual scoring window settings</string>
+                    </property>
+                    <layout class="QVBoxLayout" name="verticalLayout_7">
+                     <property name="spacing">
+                      <number>10</number>
+                     </property>
+                     <item>
+                      <layout class="QHBoxLayout" name="epochs_to_show_layout">
+                       <item>
+                        <layout class="QHBoxLayout" name="horizontalLayout_78">
+                         <item>
+                          <widget class="QLabel" name="label_20">
+                           <property name="sizePolicy">
+                            <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+                             <horstretch>0</horstretch>
+                             <verstretch>0</verstretch>
+                            </sizepolicy>
+                           </property>
+                           <property name="text">
+                            <string>Epochs to show</string>
+                           </property>
+                          </widget>
+                         </item>
+                         <item>
+                          <widget class="QSpinBox" name="epochs_to_show_spinbox">
+                           <property name="toolTip">
+                            <string>Number of epochs to display in the lower plots</string>
+                           </property>
+                           <property name="minimum">
+                            <number>3</number>
+                           </property>
+                           <property name="singleStep">
+                            <number>2</number>
+                           </property>
+                           <property name="value">
+                            <number>5</number>
+                           </property>
+                          </widget>
+                         </item>
+                        </layout>
+                       </item>
+                       <item>
+                        <spacer name="horizontalSpacer_92">
+                         <property name="orientation">
+                          <enum>Qt::Orientation::Horizontal</enum>
+                         </property>
+                         <property name="sizeHint" stdset="0">
+                          <size>
+                           <width>40</width>
+                           <height>20</height>
+                          </size>
+                         </property>
+                        </spacer>
+                       </item>
+                      </layout>
+                     </item>
+                     <item>
+                      <layout class="QHBoxLayout" name="autoscroll_layout">
+                       <item>
+                        <layout class="QHBoxLayout" name="horizontalLayout_77">
+                         <item>
+                          <widget class="QCheckBox" name="autoscroll_checkbox">
+                           <property name="sizePolicy">
+                            <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+                             <horstretch>0</horstretch>
+                             <verstretch>0</verstretch>
+                            </sizepolicy>
+                           </property>
+                           <property name="toolTip">
+                            <string>After scoring each epoch, automatically advance to the next one</string>
+                           </property>
+                           <property name="text">
+                            <string>Auto scroll</string>
+                           </property>
+                          </widget>
+                         </item>
+                        </layout>
+                       </item>
+                       <item>
+                        <spacer name="horizontalSpacer_91">
+                         <property name="orientation">
+                          <enum>Qt::Orientation::Horizontal</enum>
+                         </property>
+                         <property name="sizeHint" stdset="0">
+                          <size>
+                           <width>10</width>
+                           <height>10</height>
+                          </size>
+                         </property>
+                        </spacer>
+                       </item>
+                      </layout>
+                     </item>
+                    </layout>
+                   </widget>
                   </item>
                   <item>
                    <spacer name="verticalSpacer_5">
@@ -3989,9 +4112,7 @@ Each brain state has several attributes:
                      <string notr="true">background-color: white;</string>
                     </property>
                     <property name="text">
-                     <string>These are the default values/settings that are shown in the primary UI window when it starts up.
-Changes here will not affect the **current** state of the controls in the &quot;Sleep scoring&quot; tab.</string>
+                     <string>&lt;html&gt;&lt;head/&gt;&lt;body&gt;&lt;p&gt;These are the default values/settings that are shown in the primary window and manual scoring window when they start up.&lt;/p&gt;&lt;p&gt;Changes here will not affect the **current** state of the controls in the &amp;quot;Sleep scoring&amp;quot; tab.&lt;/p&gt;&lt;/body&gt;&lt;/html&gt;</string>
                     </property>
                     <property name="textFormat">
                      <enum>Qt::TextFormat::MarkdownText</enum>

accusleepy/gui/text/dev_guide.md CHANGED Viewed

@@ -40,7 +40,7 @@ your changes, you need to update the python representation of the UI.
    ```
    If the file already contains the line `import resources_rc`,
    replace it with the one above.
-   If you updated `primary_window.py`, you also need to add:
+   If you updated `viewer_window.py`, you also need to add:
    ```
    from accusleepy.gui.mplwidget import MplWidget
    ```

{accusleepy-0.7.3.dist-info → accusleepy-0.8.0.dist-info}/METADATA RENAMED Viewed

@@ -1,6 +1,6 @@
-Metadata-Version: 2.3
+Metadata-Version: 2.4
 Name: accusleepy
-Version: 0.7.3
+Version: 0.8.0
 Summary: Python implementation of AccuSleep
 License: GPL-3.0-only
 Author: Zeke Barger
@@ -80,6 +80,7 @@ please consult the [developer guide](accusleepy/gui/text/dev_guide.md).
 ## Changelog
+- 0.8.0: More configurable settings, visual improvements
 - 0.7.1-0.7.3: Bugfixes, code cleanup
 - 0.7.0: More settings can be configured in the UI
 - 0.6.0: Confidence scores can now be displayed and saved. Retraining your models is recommended

{accusleepy-0.7.3.dist-info → accusleepy-0.8.0.dist-info}/RECORD RENAMED Viewed

@@ -3,9 +3,9 @@ accusleepy/__main__.py,sha256=dKzl2N2Hg9lD264CWYNxThRyDKzWwyMwHRXmJxOmMis,104
 accusleepy/bouts.py,sha256=F_y6DxnpKFfImYb7vCZluZ2eD5I_33gZXmRM8mvebsg,5679
 accusleepy/brain_state_set.py,sha256=fRkrArHLIbEKimub804yt_mUXoyfsjJEfiJnTjeCMkY,3233
 accusleepy/classification.py,sha256=mF35xMrD9QXGldSnl3vkdHbm7CAptPUNjHxUA_agOTA,9778
-accusleepy/config.json,sha256=Ip0qTMAn2LZfof9GVA_azOvpXP0WKnqLCZeSaya1sss,819
-accusleepy/constants.py,sha256=r53FWeMMefuKA-mR_b2E1KBeJbq2Ck9c5VHoJ1WGZjg,2815
-accusleepy/fileio.py,sha256=woIF0zgJt6Lx6T9KBXAQ-AlbQAwOK1_RUmVF710nltI,7383
+accusleepy/config.json,sha256=VmUFsiGD1ymEyjdzqeM5nTp8jWvDI-DIxLy1_92nueo,875
+accusleepy/constants.py,sha256=62mmsr1NKzF-psS-9esuAE65kAcPL6o8v9UXQEvb5yc,2983
+accusleepy/fileio.py,sha256=iWUQtWCSL9hG3eQC8-RXJUrHv149PBxM3IjYKaUcMFk,7981
 accusleepy/gui/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 accusleepy/gui/icons/brightness_down.png,sha256=PLT1fb83RHIhSRuU7MMMx0G7oJAY7o9wUcnqM8veZfM,12432
 accusleepy/gui/icons/brightness_up.png,sha256=64GnUqgPvN5xZ6Um3wOzwqvUmdAWYZT6eFmWpBsHyks,12989
@@ -18,17 +18,17 @@ accusleepy/gui/icons/save.png,sha256=J3EA8iU1BqLYRSsrq_OdoZlqrv2yfL7oV54DklTy_DI
 accusleepy/gui/icons/up_arrow.png,sha256=V9yF9t1WgjPaUu-mF1YGe_DfaRHg2dUpR_sUVVcvVvY,3329
 accusleepy/gui/icons/zoom_in.png,sha256=MFWnKZp7Rvh4bLPq4Cqo4sB_jQYedUUtT8-ZO8tNYyc,13589
 accusleepy/gui/icons/zoom_out.png,sha256=IB8Jecb3i0U4qjWRR46ridjLpvLCSe7PozBaLqQqYSw,13055
-accusleepy/gui/images/primary_window.png,sha256=VBeXf20pYJ8Sfjz5qCrlciQfiwZhMutF4tHCHA7-RGc,595012
+accusleepy/gui/images/primary_window.png,sha256=jI_E2oZZN-Ajb4_5n-jVlNT7OkEPrK50xK2WOJnaiBc,598184
 accusleepy/gui/images/viewer_window.png,sha256=b_B7m9WSLMAOzNjctq76SyekO1WfC6qYZVNnYfhjPe8,977197
 accusleepy/gui/images/viewer_window_annotated.png,sha256=uMNUmsZIdzDlQpyoiS3lJGoWlg_T325Oj5hDZhM3Y14,146817
-accusleepy/gui/main.py,sha256=sLHe1imVU6xz3f6sJ9u7sxrTny9X213ev29ldoxXpX0,57740
-accusleepy/gui/manual_scoring.py,sha256=7jKdw-D9HdpYC2G_2RHt5UALLMjrIsP-hvLFkNM25Ek,40553
+accusleepy/gui/main.py,sha256=GdxQXdg0kxCaJzClvRiN95A6pQjZ-jBoOb2YyInKvyc,58253
+accusleepy/gui/manual_scoring.py,sha256=woi4LxsUkHfNnjPGKdSFWyynuti1rWFrar6IJP7HyKA,40773
 accusleepy/gui/mplwidget.py,sha256=rJSTtWmLjHn8r3c9Kb23Rc4XzXl3i9B-JrjNjjlNnmQ,13492
-accusleepy/gui/primary_window.py,sha256=aV0r4mRIXp56MKvuyF2iZLXPNZjZWrpugPtUb2D5saQ,135855
-accusleepy/gui/primary_window.ui,sha256=8Vs76j-QMlAKaX1oclOS1LicdGQ2znpqKarro2tLgbA,201602
+accusleepy/gui/primary_window.py,sha256=qqV-GAC3BgOus1lJMOg2U4AGQbhy35zLMyN8Q7ouTd8,141479
+accusleepy/gui/primary_window.ui,sha256=2mD0G6b8bsyyUvMCUosQ0K-nAzMA2iiP3yMpeh9INcQ,208209
 accusleepy/gui/resources.qrc,sha256=wqPendnTLAuKfVI6v2lKHiRqAWM0oaz2ZuF5cucJdS4,803
 accusleepy/gui/resources_rc.py,sha256=Z2e34h30U4snJjnYdZVV9B6yjATKxxfvgTRt5uXtQdo,329727
-accusleepy/gui/text/dev_guide.md,sha256=X69cMsPtSNCqjiYQNvaIUD-QXjRFeGHLPyH2GXMTC8Q,2061
+accusleepy/gui/text/dev_guide.md,sha256=PgOXfGvN17fCtnsfGvPhrhK4FUWFGP_TsHA6t9skP3U,2060
 accusleepy/gui/text/main_guide.md,sha256=iZDRp5OWyQX9LV7CMeUFIYv2ryKlIcGALRLXjxR8HpI,8288
 accusleepy/gui/text/manual_scoring_guide.md,sha256=ow_RMSjFy05NupEDSCuJtu-V65-BPnIkrZqtssFoZCQ,999
 accusleepy/gui/viewer_window.py,sha256=jysFw7C_Tr7mtK1XNWhIpHblBvatwduE3RF2GP4lrro,24479
@@ -38,6 +38,6 @@ accusleepy/multitaper.py,sha256=D5-iglwkFBRciL5tKSNcunMtcq0rM3zHwRHUVPgem1U,2567
 accusleepy/signal_processing.py,sha256=47fEAx8Aqqkiqix1ai2YEK9Fhq6UHoQcwAcOi-a8ewo,16834
 accusleepy/temperature_scaling.py,sha256=glvPcvxHpBdFjwjGfZdNku9L_BozycEmdqZhKKUCCNg,5749
 accusleepy/validation.py,sha256=VpLWK-wD5tCU6lTBG3KYgTi3PWGuYh6NitMgMoMH8JM,4434
-accusleepy-0.7.3.dist-info/METADATA,sha256=sna1nfMfIcNYYsNT-2Z3BlanP2Jt5kLr9wpBuRILhzA,4743
-accusleepy-0.7.3.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
-accusleepy-0.7.3.dist-info/RECORD,,
+accusleepy-0.8.0.dist-info/METADATA,sha256=gnk8O1By632zTCFJG9ifqkQDDSEDTqggGUpG8F-WPgs,4800
+accusleepy-0.8.0.dist-info/WHEEL,sha256=zp0Cn7JsFoX2ATtOhtaFYIiE2rmFAD4OcMhtUki8W3U,88
+accusleepy-0.8.0.dist-info/RECORD,,

{accusleepy-0.7.3.dist-info → accusleepy-0.8.0.dist-info}/WHEEL RENAMED Viewed

@@ -1,4 +1,4 @@
 Wheel-Version: 1.0
-Generator: poetry-core 2.1.3
+Generator: poetry-core 2.2.1
 Root-Is-Purelib: true
 Tag: py3-none-any

accusleepy 0.7.3__py3-none-any.whl → 0.8.0__py3-none-any.whl

accusleepy 0.7.3py3-none-any.whl → 0.8.0py3-none-any.whl